HHsearch results for GI: 254780804 and protein with PDBid: 2chg_A
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=98.96 E-value=1.2e-07 Score=68.16 Aligned_cols=179 Identities=13% Similarity=0.109 Sum_probs=127.0
Q ss_pred EEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHH----HHHHHHHCCCCCC-CCEEEEEECCCC-HHHH
Q ss_conf 999569965899999999997335666773077620889641899----9999871788888-823999847741-0457
Q gi|254780804|r 24 FIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNIS----TFWNEINSTSLFS-KKKIILIENLST-EKKV 97 (352)
Q Consensus 24 yLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~----~l~~~~~t~slF~-~~klIii~~~~~-~k~~ 97 (352)
+||||+.-.-+...++.+.+.+..... ..++..+++.+. ...+ ...+.+...+..+ .+++|++++... ....
T Consensus 41 ~Ll~Gp~G~GKTtla~~iak~l~~~~~-~~~~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~iiide~~~l~~~~ 118 (226)
T 2chg_A 41 LLFSGPPGTGKTATAIALARDLFGENW-RDNFIEMNASDE-RGIDVVRHKIKEFARTAPIGGAPFKIIFLDEADALTADA 118 (226)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHGGGG-GGGEEEEETTCT-TCHHHHHHHHHHHHTSCCSTTCSCEEEEEETGGGSCHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCC-CCCCCEEECCCC-CCHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCHHH
T ss_conf 988899999889999999999843555-677132346776-769999999999986011269866999951120168999
Q ss_pred HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 89889885105656079998526543113566765431121014664420013588988754302566756799999620
Q gi|254780804|r 98 LDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQKSISKEAKQILLANL 177 (352)
Q Consensus 98 ~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~ 177 (352)
...|...++.++....+++......+ +-..+ ...+..+.+.+++..++..++...+.++|+.+++++++.+++.+
T Consensus 119 q~~ll~~le~~~~~~~~i~~~~~~~~---l~~~i--~sr~~~i~~~~~~~~~~~~~l~~i~~~e~i~i~~~~l~~I~~~s 193 (226)
T 2chg_A 119 QAALRRTMEMYSKSCRFILSCNYVSR---IIEPI--QSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYIS 193 (226)
T ss_dssp HHHHHHHHHHTTTTEEEEEEESCGGG---SCHHH--HTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEECCCCHHH---CCHHH--HCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
T ss_conf 99988876427765447736798565---81778--65356654301237999999999888609997999999999986
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
Q ss_conf 01235568999999751034443488888775310
Q gi|254780804|r 178 GGDRIASRNELQKLSSYCLEDILITEQHVKDIICD 212 (352)
Q Consensus 178 g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~ 212 (352)
+||.+.+.+.||..+.+ .+.||.+.|..+.+.
T Consensus 194 ~GdiR~ain~Le~~~~~---~~~i~~~~i~~i~~~ 225 (226)
T 2chg_A 194 GGDFRKAINALQGAAAI---GEVVDADTIYQITAT 225 (226)
T ss_dssp TTCHHHHHHHHHHHHHT---CSCBCHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHC---CCCCCHHHHHHHHHC
T ss_conf 99699999999999982---999789999999706