HHsearch results for GI: 254780804 and protein with PDBid: 2gno_A
>2gno_A DNA polymerase III, gamma subunit-related protein; TM0771, structural genomics, PSI, protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima MSB8} SCOP: a.80.1.1 c.37.1.20
Probab=98.29 E-value=0.00012 Score=48.35 Aligned_cols=101 Identities=9% Similarity=0.141 Sum_probs=72.5
Q ss_pred EEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEE--HHHH-HCCHHHHHHHHHCCCCCCCCEEEEEECCCCH-HHHH
Q ss_conf 7999569965899999999997335666773077620--8896-4189999998717888888239998477410-4578
Q gi|254780804|r 23 VFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLN--ALEI-QKNISTFWNEINSTSLFSKKKIILIENLSTE-KKVL 98 (352)
Q Consensus 23 iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~--~~e~-~~d~~~l~~~~~t~slF~~~klIii~~~~~~-k~~~ 98 (352)
=-+|||++...+...+..+.+.+.......-.+..+. +..+ .++...+.+.+...|..|+.|+|++.++... ....
T Consensus 20 ~~~~~g~~g~gk~~~~~~~~~~i~~~~~~HpD~~~i~~e~~~I~Id~IR~l~~~~~~~p~~~~~KVvIId~ad~lt~~Aa 99 (305)
T 2gno_A 20 SILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRTIKDFLNYSPELYTRKYVIVHDCERMTQQAA 99 (305)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSCBCHHHHHHHHHHHTSCCSSSSSEEEEETTGGGBCHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCHHHH
T ss_conf 49888999988799999999997365677998898707767899899999999995355358966999857554299999
Q ss_pred HHHHHHHHCCCCCEEEEEEECCCCC
Q ss_conf 9889885105656079998526543
Q gi|254780804|r 99 DCLEEIIIKNICNHIIIIKSNEIKK 123 (352)
Q Consensus 99 ~~l~~~~~~~~~~~~li~~a~~l~k 123 (352)
.+|-..++.||++|++|+.+....+
T Consensus 100 NaLLK~LEEPp~~t~fIL~t~~~~k 124 (305)
T 2gno_A 100 NAFLKALEEPPEYAVIVLNTRRWHY 124 (305)
T ss_dssp HHTHHHHHSCCTTEEEEEEESCGGG
T ss_pred HHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf 9999997479977058752057424