HHsearch results for GI: 254780804 and protein with PDBid: 2qby_B
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=96.98 E-value=0.019 Score=33.73 Aligned_cols=200 Identities=15% Similarity=0.091 Sum_probs=109.9
Q ss_pred EEEEECCCHHHHHHHHHHHHHHHCC-----CCCCCCEEEEEEHHHHHCCHHHHHHHH----HCC----------------
Q ss_conf 7999569965899999999997335-----666773077620889641899999987----178----------------
Q gi|254780804|r 23 VFIFYGSDKGLIFELINQFKKNISI-----TYHDPFSLVVLNALEIQKNISTFWNEI----NST---------------- 77 (352)
Q Consensus 23 iyLi~G~d~~l~~~~~~~l~k~~~~-----~~~~~~~~~~~~~~e~~~d~~~l~~~~----~t~---------------- 77 (352)
-+||||+----+...++.+.+.+.. ....+.......+.++......+...+ ...
T Consensus 47 ~~li~GppG~GKTtlar~v~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 126 (384)
T 2qby_B 47 SNLFLGLTGTGKTFVSKYIFNEIEEVKKEDEEYKDVKQAYVNCREVGGTPQAVLSSLAGKLTGFSVPKHGINLGEYIDKI 126 (384)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHHHHHSSSSTTCEEEEEEHHHHCSCHHHHHHHHHHHHHCSCCCSSSSCTHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf 08998799882999999999998765045456888418995004406748999999998743343651134499999998
Q ss_pred --CCCCCCEEEEEECCCCH---HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf --88888239998477410---4578988988510565607999852654311356676543112101466442001358
Q gi|254780804|r 78 --SLFSKKKIILIENLSTE---KKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHLMD 152 (352)
Q Consensus 78 --slF~~~klIii~~~~~~---k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l~~ 152 (352)
.....+.++++.+.... ......+.. +..+.....+|+..........+..-.. +.....+.+.|.+..++.+
T Consensus 127 ~~~~~~~~~~ivlDe~d~l~~~~~~~~~~~~-l~~~~~~~~~I~~~~~~~~~~~~~~~~~-sr~~~~~~~~p~~~~ei~~ 204 (384)
T 2qby_B 127 KNGTRNIRAIIYLDEVDTLVKRRGGDIVLYQ-LLRSDANISVIMISNDINVRDYMEPRVL-SSLGPSVIFKPYDAEQLKF 204 (384)
T ss_dssp HHHHSSSCEEEEEETTHHHHHSTTSHHHHHH-HHTSSSCEEEEEECSSTTTTTTSCHHHH-HTCCCEEEECCCCHHHHHH
T ss_pred HHHHHCCCEEEEECHHHHHHHCCHHHHHHHH-HHCCCCCCEEEEECCCHHHHHHHCCCHH-HHCCCCCCCCCCCHHHHHH
T ss_conf 7434126706850105566520014456654-3105666428985154036776330034-3225200158899999999
Q ss_pred HHHHHHHH--CCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 89887543--025667567999996200---1235568999999751034443488888775310122111467888
Q gi|254780804|r 153 LIEESLLI--GQKSISKEAKQILLANLG---GDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINA 224 (352)
Q Consensus 153 ~i~~~~~~--~g~~i~~~a~~~L~~~~g---~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~da 224 (352)
.++.++.. ....++++++.++...++ +|.+.+..-+......+.+.+.|+.+++...+.........+..+.
T Consensus 205 Il~~r~~~~~~~~~~~~~~~~~i~~~~~~~~g~~r~al~~l~~a~~~ae~~~~i~~~~v~~~~~~~~~~~~~~~~~~ 281 (384)
T 2qby_B 205 ILSKYAEYGLIKGTYDDEILSYIAAISAKEHGDARKAVNLLFRAAQLASGGGIIRKEHVDKAIVDYEQERLIEAVKA 281 (384)
T ss_dssp HHHHHHHHTSCTTSCCSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTSSSCCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999986203367787999999999866489999999999999998526999689999999976410157888861