HHSEARCH alignment of GI: 254780804 and SCOP domain: d1sxje2

Alignment
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.03  E-value=0.00034  Score=43.80  Aligned_cols=108  Identities=13%  Similarity=0.182  Sum_probs=80.2

Q ss_pred             CCCCEEEEEECCCCH-HHHHHHHHHHHHCCCCCEEEEEEECCCCCCH-HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf             888239998477410-4578988988510565607999852654311-35667654311210146644200135889887
Q gi|254780804|r   80 FSKKKIILIENLSTE-KKVLDCLEEIIIKNICNHIIIIKSNEIKKNN-TLRKIAEKFTSVLAISCYPDNKIHLMDLIEES  157 (352)
Q Consensus        80 F~~~klIii~~~~~~-k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~-kl~k~~e~~~~~~~v~~~~~~~~~l~~~i~~~  157 (352)
                      -+..++++++++... ......+...++.++.++.+|+.+....+-. +++      ..+..+.+.+++..++..++...
T Consensus       129 ~~~~~iiiide~d~l~~~~~~~l~~~~e~~~~~~~~Il~tn~~~~i~~~l~------sR~~~i~~~~~~~~~~~~~l~~i  202 (252)
T d1sxje2         129 AHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIK------SQCLLIRCPAPSDSEISTILSDV  202 (252)
T ss_dssp             --CCEEEEEECTTSSCHHHHHHHHHHHHHSTTTEEEEEEESCSCSSCHHHH------TTSEEEECCCCCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCHHHHHH------CCHHEEEECCCCHHHHHHHHHHH
T ss_conf             787249994243334543111221002213566430001021110025442------10002430353304689999999


Q ss_pred             HHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             543025667-567999996200123556899999975
Q gi|254780804|r  158 LLIGQKSIS-KEAKQILLANLGGDRIASRNELQKLSS  193 (352)
Q Consensus       158 ~~~~g~~i~-~~a~~~L~~~~g~d~~~l~~EleKL~l  193 (352)
                      ++.+|+.++ +++++.|+..++||.+.+.+.|+-++.
T Consensus       203 ~~~e~~~~~~~~~l~~i~~~s~Gd~R~ai~~Lq~~~~  239 (252)
T d1sxje2         203 VTNERIQLETKDILKRIAQASNGNLRVSLLMLESMAL  239 (252)
T ss_dssp             HHHHTCEECCSHHHHHHHHHHTTCHHHHHHHHTHHHH
T ss_pred             HHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             9983999896999999999869949999999999997


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: Replication factor C5
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]