HHSEARCH alignment of GI: 254780804 and SCOP domain: d1w5sa2

Alignment

Probab=91.98  E-value=0.32  Score=24.07  Aligned_cols=74  Identities=9%  Similarity=0.126  Sum_probs=52.3

Q ss_pred             HCCCCCCCCHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHH--CCCCCCCCHHHHHH
Q ss_conf             014664420013588988754302--566756799999620------01235568999999751--03444348888877
Q gi|254780804|r  139 AISCYPDNKIHLMDLIEESLLIGQ--KSISKEAKQILLANL------GGDRIASRNELQKLSSY--CLEDILITEQHVKD  208 (352)
Q Consensus       139 ~v~~~~~~~~~l~~~i~~~~~~~g--~~i~~~a~~~L~~~~------g~d~~~l~~EleKL~ly--~~~~~~It~~dI~~  208 (352)
                      .+.+.+.+..++...++.+++...  ..++++++.++++.+      .+|.+.+.+-+..-...  ..+.+.||.++|++
T Consensus       203 ~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~  282 (287)
T d1w5sa2         203 KLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRK  282 (287)
T ss_dssp             EEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHH
T ss_pred             EEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf             65225775999999876667775246877999999999997230367889999999999999999984999879999999


Q ss_pred             HHHC
Q ss_conf             5310
Q gi|254780804|r  209 IICD  212 (352)
Q Consensus       209 ~v~~  212 (352)
                      .+..
T Consensus       283 A~~e  286 (287)
T d1w5sa2         283 AVSE  286 (287)
T ss_dssp             HHHH
T ss_pred             HHHC
T ss_conf             9846

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: CDC6-like protein APE0152, N-terminal domain
species: Aeropyrum pernix [TaxId: 56636]