BLAST/PSIBLAST alignment of GI: 254780804 and GI: 325294120 at iteration 1
>gi|325294120|ref|YP_004279984.1| DNA polymerase III, delta subunit [Agrobacterium sp. H13-3] Length = 345
>gi|325061973|gb|ADY65664.1| putative DNA polymerase III, delta subunit [Agrobacterium sp. H13-3] Length = 345
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 182/331 (54%), Gaps = 3/331 (0%)
Query: 1 MATIESHKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNA 60
M I+SH+F ++ +N VF+ YG D+GL+ E N K I D F+ + L+A
Sbjct: 1 MTEIKSHEF-ERFAENPAERFRVFVLYGPDRGLVSERANLIAKKTGIDPDDAFASLKLSA 59
Query: 61 LEIQKNISTFWNEINSTSLFSKKKIILIENLSTEKKVLDCLEEIIIKNICNHIIIIKSNE 120
++Q + +E+N+ LF +K++ I++ S EK ++D L+ + +II++ +
Sbjct: 60 SDLQGDPGRLLDEVNAIGLFGGEKLVWIKSASAEKALVDALQILAETPPEASFLIIEAGD 119
Query: 121 IKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQKSISKEAKQILLANLGGD 180
IKK LRKIAE S+ AI CY D+ L LI++ L I+ A+Q L+ LGGD
Sbjct: 120 IKKGTGLRKIAEPARSIAAIPCYADDARSLNALIDQELSADNLRIAPAARQRLIEQLGGD 179
Query: 181 RIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLA-DF 239
RIASRNE++KL+ YC +I E V II D + ++ ++A ++G NA A
Sbjct: 180 RIASRNEIRKLALYCRGAEVIEEDDVLAIIGDASTVSADDAVDAILKGD-RNAFFHATQK 238
Query: 240 FLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLR 299
++SK P +L G L++FQLL+++ + +++Q ++I ++ +++ +LR
Sbjct: 239 IVSSKTPIFLVLQGCLKQFQLLDQMRAEMDEKKQQAGQVMQTLGRHIHFRRKPVIERALR 298
Query: 300 IWNKNLVRETLHKIDHRIHLARKKKYLEKNI 330
W + ++++ I +R+++ LE ++
Sbjct: 299 TWQPAAIAREMNRLQAAILQSRQRQSLEDSV 329