RPSBLAST alignment for GI: 254780804 and conserved domain: COG1466

>gnl|CDD|31655 COG1466, HolA, DNA polymerase III, delta subunit [DNA replication, recombination, and repair]. Length = 334

 Score =  103 bits (259), Expect = 5e-23
 Identities = 68/317 (21%), Positives = 143/317 (45%), Gaps = 11/317 (3%)

Query: 23  VFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEINSTSLFSK 82
           V++ YG D+GL+ E  +   K       D F        + + + +   +E+ S SLF +
Sbjct: 18  VYLLYGEDEGLLEEAADAILKRA---LADGFDENYSFFDDSELDWADLLSELESPSLFGE 74

Query: 83  KKIILI---ENLSTEKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLA 139
           K+++++   E    + K L  LE   +    + +++++SN++ K   L K  +K    + 
Sbjct: 75  KRLVVLKNAEKKPNKDKNLALLELAALLPSTDLLLLVESNKLDKAKKLTKWLKKLAKAVV 134

Query: 140 ISCYPDNKIHLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDI 199
           + C P ++  L   I++        I +EA Q+LL  LGG+ +A   E++KL+ Y   D 
Sbjct: 135 VECKPLDEAELPQWIKKRAKELGLKIDQEAIQLLLEALGGNLLAIAQEIEKLALYA-GDK 193

Query: 200 LITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLADFFLASKMPSHALLHGFLQKFQ 259
            IT + V++++ D     I ++ +A ++G +  A+ L    L        LL    ++F+
Sbjct: 194 EITLEDVEEVVSDVAEFNIFDLADALLKGDVKKALRLLRDLLLEGEEPLKLLAALTRQFR 253

Query: 260 LLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRETLHKIDHRIHL 319
           LL ++  + E      +         I   ++ + +++ R  +   + + L ++  ++  
Sbjct: 254 LLLQLKALAEKGKSLQQAAKS---LGIPYRRKKLFKKAARRLSLKQLLKAL-RLLAQLDY 309

Query: 320 ARKKKYLEKNIIFQTIL 336
             K  Y +     +  L
Sbjct: 310 QIKTGYGDPVWALELFL 326