HHsearch alignment for GI: 254780805 and conserved domain: COG1476

>COG1476 Predicted transcriptional regulators [Transcription].
Probab=90.18  E-value=0.22  Score=28.87  Aligned_cols=29  Identities=31%  Similarity=0.539  Sum_probs=24.5

Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99985210111046799997433787786
Q gi|254780805|r  143 GYEQLISEYGYTQNDIGSIVGKSRSHVAN  171 (300)
Q Consensus       143 ~~~~l~~~~~~t~~~lA~~~G~s~s~V~~  171 (300)
T Consensus         5 k~k~~R~~~~ltQ~elA~~vgVsRQTi~~   33 (68)
T COG1476           5 KLKELRAELGLTQEELAKLVGVSRQTIIA   33 (68)
T ss_pred             HHHHHHHHHCCCHHHHHHHCCCCHHHHHH
T ss_conf             99999998285899999991957999999