HHsearch alignment for GI: 254780805 and conserved domain: COG1476
>COG1476 Predicted transcriptional regulators [Transcription].
Probab=90.18 E-value=0.22 Score=28.87 Aligned_cols=29 Identities=31% Similarity=0.539 Sum_probs=24.5
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99985210111046799997433787786
Q gi|254780805|r 143 GYEQLISEYGYTQNDIGSIVGKSRSHVAN 171 (300)
Q Consensus 143 ~~~~l~~~~~~t~~~lA~~~G~s~s~V~~ 171 (300)
T Consensus 5 k~k~~R~~~~ltQ~elA~~vgVsRQTi~~ 33 (68)
T COG1476 5 KLKELRAELGLTQEELAKLVGVSRQTIIA 33 (68)
T ss_pred HHHHHHHHHCCCHHHHHHHCCCCHHHHHH
T ss_conf 99999998285899999991957999999