HHsearch alignment for GI: 254780805 and conserved domain: PHA01976
>PHA01976 helix-turn-helix protein.
Probab=95.17 E-value=0.016 Score=36.13 Aligned_cols=35 Identities=9% Similarity=0.091 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999985210111046799997433787786565
Q gi|254780805|r 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174 (300)
Q Consensus 140 ~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~Lr 174 (300)
T Consensus 3 F~~RL~~lR~~~g~sQ~eLA~~lGVs~~~is~wE~ 37 (67)
T PHA01976 3 FAIQLIKARNARAWSAPELSRRAGVRHSLIYDFEA 37 (67)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHC
T ss_conf 89999999998699999999994998999999987