HHsearch alignment for GI: 254780805 and conserved domain: smart00530
>smart00530 HTH_XRE Helix-turn-helix XRE-family like proteins.
Probab=91.70 E-value=0.15 Score=29.90 Aligned_cols=33 Identities=30% Similarity=0.371 Sum_probs=27.4
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998521011104679999743378778656565
Q gi|254780805|r 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176 (300)
Q Consensus 144 ~~~l~~~~~~t~~~lA~~~G~s~s~V~~~LrLl 176 (300)
T Consensus 2 lr~~R~~~glsq~~lA~~~gis~~~is~~E~g~ 34 (56)
T smart00530 2 LKELREEKGLTQEELAEKLGVSRSTLSRIENGK 34 (56)
T ss_pred HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCC
T ss_conf 899997729999999999895999999999799