HHsearch alignment of GI: 254780805 and MMDB domain: 1ic8_A_1-85
>1ic8_A (A:1-85) Hepatocyte nuclear factor 1-alpha; transcription regulation, DNA-binding, POU domain, diabetes, disease mutation, MODY3, transcription/DNA comple; 2.60A {Homo sapiens}
Probab=94.71 E-value=0.058 Score=32.18 Aligned_cols=55 Identities=20% Similarity=0.326 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 112345566654310221048999999985210111046799997433787786565
Q gi|254780805|r 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174 (300)
Q Consensus 118 d~~~~~~~l~EN~~R~dl~p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~Lr 174 (300)
++....-.-+|.+-|+| |..-+.-++..+..++++|..+|+..|.|.|+||..|.
T Consensus 11 eE~~~~~~~Veellr~d--~~~v~~eIK~Fl~~~~I~Q~~Va~~TGisQS~iSq~L~ 65 (85)
T 1ic8_A 11 EEAAHQKAVVETLLQED--PWRVAKMVKSYLQQHNIPQREVVDTTGLNQSHLSQHLN 65 (85)
T ss_dssp HHHHHHHHHHHHHTTSC--HHHHHHHHHHHHHHTTCCHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHC
T ss_conf 88888999999998607--09999999999987389602200344657789998831