HHsearch alignment of GI: 254780805 and MMDB domain: 1vz0_A_1-99
>1vz0_A (A:1-99) PARB, chromosome partitioning protein PARB; nuclear protein, chromosome segregation, DNA-binding, helix-turn-helix; 2.3A {Thermus thermophilus}
Probab=99.84 E-value=3.9e-22 Score=161.80 Aligned_cols=97 Identities=42% Similarity=0.749 Sum_probs=86.4
Q ss_pred CHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECC
Q ss_conf 02221255868733776543342100001345660240389823578999876898899999998863100155046205
Q gi|254780805|r 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI 84 (300)
Q Consensus 5 ~~~~~lGrgl~al~~~~~~~~~~~~~~~~~~~~~~~~i~i~~i~~~p~~pR~~~~~~~l~eLa~SI~~~G~lqPi~Vr~~ 84 (300)
-+++++|++++++++. ....+..||++.|.|+|+|||+.++++.+++|++||+++|+++||+|++.
T Consensus 3 ~k~~~~~~~~~a~~~~--------------~~~~~~~i~i~~i~~~~~n~r~~~~~~~~~~L~~sI~~~G~~~Pi~V~~~ 68 (99)
T 1vz0_A 3 RKPSGLGRGLEALLPK--------------TGAGVVRLPLASIRPNPRQPRKRFAEESLKELADSIREKGLLQPLLVRPQ 68 (99)
T ss_dssp ----------------------------------CEEEEGGGEECCCCCHHHHHHHHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CCCCCCCCCHHHHCCC--------------CCCCEEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 7867677687884788--------------77874883299976798999877798899999999986234354168745
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 65445333575677777642100135433346
Q gi|254780805|r 85 DNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116 (300)
Q Consensus 85 ~~g~y~ii~G~rR~rAa~~~g~~~ip~iv~~~ 116 (300)
+ |+|+|++|||||+||+.+|+++|||+|.|+
T Consensus 69 ~-g~y~ii~G~~R~~aa~~lg~~~Ip~~v~d~ 99 (99)
T 1vz0_A 69 G-DGYELVAGERRYRAALMAGLQEVPAVVKDL 99 (99)
T ss_dssp T-TEEEEEECHHHHHHHHHHTCSEEEEEECCC
T ss_pred C-CEEEEEECHHHHHHHHHCCCCEEEEEEEEC
T ss_conf 9-858998478888999986997323699728