HHsearch alignment of GI: 254780805 and MMDB domain: 1vz0_A_159-230

>1vz0_A (A:159-230) PARB, chromosome partitioning protein PARB; nuclear protein, chromosome segregation, DNA-binding, helix-turn-helix; 2.3A {Thermus thermophilus}
Probab=99.39  E-value=1.8e-13  Score=106.12  Aligned_cols=62  Identities=29%  Similarity=0.399  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHCCH--HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
Q ss_conf             4358999987642101677777640100--4689999742224778999999764102222223
Q gi|254780805|r  177 KLPSSVREMIRKEEISLGHARTLVSTSD--PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK  238 (300)
Q Consensus       177 ~L~~~i~~~l~~~~is~ghar~Ll~~~~--~~~la~~Ii~~~LSVRe~E~lVk~~~~~~~~~kk  238 (300)
                      +||++||++|.+|.||+||||+|+++++  +.+++++|+.++||||++|++|+.+..+...+++
T Consensus         1 kLp~~vq~~i~~g~is~GHARaLL~L~~~~q~~~~~~ii~~~lsVR~~E~~v~~~~~~~~~~~~   64 (72)
T 1vz0_A            1 QLPPEALEALERGEITAGHARALLMLEPEDRLWGLKEILEKGLSVRQAEALRERLAMAPKRSAE   64 (72)
T ss_dssp             GSCHHHHHHHHTTSSCHHHHHHHHTSCGGGHHHHHHHHHHTCCCHHHHCC--------------
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf             1336777777528732789998852997999999999998499999999999986328988878