HHsearch alignment of GI: 254780805 and MMDB domain: 3fmy_A_
>3fmy_A (A:) HTH-type transcriptional regulator MQSA (YGIT/B3021); helix-turn-helix, DNA-binding, transcription regulation, DNA binding protein; HET: MEQ; 1.40A {Escherichia coli k-12}
Probab=93.12 E-value=0.067 Score=31.79 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=31.3
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999998521011104679999743378778656565435
Q gi|254780805|r 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179 (300)
Q Consensus 141 A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~LrLl~L~ 179 (300)
+..++++..+.|+||+++|+.+|.|+++|+++.+=-..|
T Consensus 13 g~~ir~~R~~~glsq~~lA~~~gis~~~is~~E~g~~~p 51 (73)
T 3fmy_A 13 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAXP 51 (73)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHCSCTTHHHHHHTTSSCC
T ss_pred HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCC
T ss_conf 999999999869999999999798999999999499899