HHsearch alignment of GI: 254780805 and MMDB domain: 3hef_A_
>3hef_A (A:) Gene 1 protein; bacteriophage SF6, terminase small subunit GP1, GP1 octameric assembly, GP1 channel, DNA recognition, DNA packaging; 1.65A {Enterobacteria phage SF6}
Probab=90.51 E-value=0.37 Score=27.01 Aligned_cols=119 Identities=16% Similarity=0.063 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH---H
Q ss_conf 899999998521011104679999743-378778656565435899998764210167777764010046899997---4
Q gi|254780805|r 138 LEEALGYEQLISEYGYTQNDIGSIVGK-SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI---V 213 (300)
Q Consensus 138 ~e~A~~~~~l~~~~~~t~~~lA~~~G~-s~s~V~~~LrLl~L~~~i~~~l~~~~is~ghar~Ll~~~~~~~la~~I---i 213 (300)
-|.+..+..++. .|.|..+||..+|. |++|+.+.+ +-.|+..+.+..+.... ...+++.+ +
T Consensus 18 ~e~~~~i~~~~~-~G~s~~~Ia~~~gips~~Tl~~W~---~~~~ef~e~~~~ak~~~-----------~~~v~~~l~~~A 82 (143)
T 3hef_A 18 PEVADDICSLLS-SGESLLKVCKRPGMPDKSTVFRWL---AKHEDFRDKYAKATEAR-----------ADSIFEEIFEIA 82 (143)
T ss_dssp HHHHHHHHHHHH-TTCCHHHHHTSTTCCCHHHHHHHT---TTCHHHHHHHHHHHHHH-----------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCCCHHHHHHCCCCCCHHHHHHHH---HHCHHHHHHHHHHHHHH-----------HHHHHHHHHHHH
T ss_conf 999999999998-798799998727999689999999---81789999999999999-----------999999999999
Q ss_pred HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCC-CEEEEEEECCHHHHH
Q ss_conf 22247789999997641022222234566556897899999999997398799971798-228999858989999
Q gi|254780805|r 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLK 287 (300)
Q Consensus 214 ~~~LSVRe~E~lVk~~~~~~~~~kk~~~~~~~k~~~i~~le~~L~~~lGtkV~I~~~~~-kGkI~I~f~s~eeLe 287 (300)
.+..--..+.+.++ ......+--|.+...+..|.|+++.+.+. .|-|.+.-..+++|+
T Consensus 83 ~~~~~~~~~~~~~~----------------~~~~A~~f~L~~~~p~~y~dk~~~e~tg~~g~~i~~~~~~~~~l~ 141 (143)
T 3hef_A 83 DNAIPDAAEVAKAR----------------LRVDTRKWALARMNPRKYGDKVTNELVGKDGGAIQIETSPMSTLF 141 (143)
T ss_dssp HTCCSSHHHHHHHH----------------HHHHHHHHHHHHHSHHHHSCCEEEEEECGGGSCCCEEEC------
T ss_pred HCCCCCHHHHHHHH----------------HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEECCCHHHC
T ss_conf 60113527887777----------------888899999972681313654320035789986588732405332