HHsearch results for GI: 254780805 and protein with PDBid: 1r71_A
>1r71_A Transcriptional repressor protein KORB; INCP, plasmid partitioning, protein-DNA complex, heilx-turn- helix motif, transcription factor; HET: BRU; 2.20A {Escherichia coli} SCOP: a.4.14.1
Probab=99.93 E-value=9.2e-26 Score=184.10 Aligned_cols=116 Identities=23% Similarity=0.353 Sum_probs=99.5
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77777642100135433346411234556665431022104899999998521011104679999743378778656565
Q gi|254780805|r 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176 (300)
Q Consensus 97 R~rAa~~~g~~~ip~iv~~~~d~~~~~~~l~EN~~R~dl~p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~LrLl 176 (300)
|||||+.+|+++|||+|.+..+. ..+++||+||+||||+|+|.+|++|+++ |+|+++||+++|+|++||+++|+|+
T Consensus 1 R~rA~~~ag~~~ipa~v~~~~~~---~~~l~EN~qR~~l~~~e~A~~~~~l~~~-g~t~~~iA~~lg~s~~~V~~~l~l~ 76 (178)
T 1r71_A 1 RYRGSKWAGKKSIPAFIDNDYNE---ADQVIENLQRNELTPREIADFIGRELAK-GKKKGDIAKEIGKSPAFITQHVTLL 76 (178)
T ss_dssp ----------------------C---CHHHHHHHHTTCCCHHHHHHHHHHHHHT-TCCHHHHHHHHTCCHHHHHHHHGGG
T ss_pred CHHHHHHCCCCCCCEEECCCCCH---HHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCHHHHHHHHCCCHHHHHHHHHHC
T ss_conf 93889884998444586377556---9999998650689999999999999981-7889999999699999999999980
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHC---CHHHHHHHHHHHCC
Q ss_conf 43589999876421016777776401---00468999974222
Q gi|254780805|r 177 KLPSSVREMIRKEEISLGHARTLVST---SDPLSLAQVIVSKK 216 (300)
Q Consensus 177 ~L~~~i~~~l~~~~is~ghar~Ll~~---~~~~~la~~Ii~~~ 216 (300)
+||+.+++++.+|.|+.+|+...+.. .++..+...+....
T Consensus 77 ~lp~~v~~~~~~g~i~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 119 (178)
T 1r71_A 77 DLPEKIADAFNTGRVRDVTVVNELVTAFKKRPEEVEAWLDDDT 119 (178)
T ss_dssp SCCHHHHHHHHTTSCCCHHHHHHHHHHHHHCHHHHHHHHHCTT
T ss_pred CCCHHHHHHHHCCCCCHHHHHHHHHHCCHHCHHHHHHHHHHHH
T ss_conf 6999999999949986799999998603415999999999861