HHsearch results for GI: 254780805 and protein with PDBid: 3ivp_A

>3ivp_A Putative transposon-related DNA-binding protein; APC62618, structural genomics, PSI-2, protein structure initiative; HET: PG4; 2.02A {Clostridium difficile 630}

Probab=93.04  E-value=0.085  Score=30.14  Aligned_cols=40  Identities=15%  Similarity=0.230  Sum_probs=32.2

Q ss_pred             CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1048999999985210111046799997433787786565
Q gi|254780805|r  135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR  174 (300)
Q Consensus       135 l~p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~Lr  174 (300)
                      ++.-.-+..++.+....||||.++|..+|.|+++|+++-+
T Consensus         8 ~d~~~ig~rlk~~R~~~gltq~elA~~lgvs~s~is~~E~   47 (126)
T 3ivp_A            8 YDFRALGLAIKEARKKQGLTREQVGAMIEIDPRYLTNIEN   47 (126)
T ss_dssp             CCTHHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf             3899999999999998499999996730999879999970