HHSEARCH alignment of GI: 254780805 and SCOP domain: d1b0na2

Alignment

Probab=92.89  E-value=0.041  Score=30.62  Aligned_cols=33  Identities=24%  Similarity=0.381  Sum_probs=28.8

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999985210111046799997433787786565
Q gi|254780805|r  142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILR  174 (300)
Q Consensus       142 ~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~Lr  174 (300)
                      ..++++..+.|+||+++|+++|.|+++|+++-+
T Consensus         4 ~~ik~~R~~~gltq~~la~~~gis~~~i~~~E~   36 (68)
T d1b0na2           4 QRIKQYRKEKGYSLSELAEKAGVAKSYLSSIER   36 (68)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHC
T ss_conf             999999998299999999897979999999985

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: SinR repressor, DNA-binding domain
species: Bacillus subtilis [TaxId: 1423]