Probab=91.19 E-value=0.32 Score=24.95 Aligned_cols=39 Identities=15% Similarity=0.119 Sum_probs=29.4 Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 21048999999985210111046799997433787786565 Q gi|254780805|r 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174 (300) Q Consensus 134 dl~p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~Lr 174 (300) .|+|-+....+.+.. .|+|.+++|+.+|.|.++|.+++. T Consensus 21 ~L~~~~r~v~~l~~~--~~~s~~eIA~~lgis~~tv~~~~~ 59 (71) T d1rp3a2 21 KLPEREKLVIQLIFY--EELPAKEVAKILETSVSRVSQLKA 59 (71) T ss_dssp TSCHHHHHHHHHHHT--SCCCHHHHHHHTTSCHHHHHHHHH T ss_pred CCCHHHHHHHHHHHH--HHCCHHHHHHHHCCCHHHHHHHHH T ss_conf 799999999999986--848999999997989999999999
class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Sigma3 and sigma4 domains of RNA polymerase sigma factors
family: Sigma4 domain
domain: Sigma factor sigma-28 (FliA)
species: Aquifex aeolicus [TaxId: 63363]