HHSEARCH alignment of GI: 254780805 and SCOP domain: d1vk1a_

Alignment

Probab=100.00  E-value=1e-37  Score=259.42  Aligned_cols=190  Identities=18%  Similarity=0.184  Sum_probs=161.9

Q ss_pred             CEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEC--CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             024038982357899987689889999999886310015504620--565445333575677777642100135433346
Q gi|254780805|r   39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV  116 (300)
Q Consensus        39 ~~~i~i~~i~~~p~~pR~~~~~~~l~eLa~SI~~~G~lqPi~Vr~--~~~g~y~ii~G~rR~rAa~~~g~~~ip~iv~~~  116 (300)
                      +..+++..|.++++|||..|+++.+++|+.||+++|+++|++|++  .+++.|+||+|||||+||+.+|+++|||+|.|+
T Consensus         3 v~~ie~~~i~~~~l~P~~~~~~~~l~~L~~sI~~~G~~~ppivv~~~~~~~~y~Ii~G~~R~~Aak~lG~~~IP~iv~d~   82 (232)
T d1vk1a_           3 VKKVEYVFIELDKMKPHEQLVQRELEDFIESVTGSGIFWKPMLLAKIPGTDEYLIVDGHHRWAGLQKLGAKRAPSVILDY   82 (232)
T ss_dssp             EECCCCEEEEGGGEECSBCCCHHHHHHHHHHHHHHCEECSCEEEEECTTSSCEEEEECHHHHHHHHHHTCCEEEEEEECT
T ss_pred             CEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECHHHHHHHHHCCCCCCCEEEEEC
T ss_conf             43355157642128898668999999999999980987898898405899877999528999999987998567899837


Q ss_pred             CCHHHHH-----------HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q ss_conf             4112345-----------566654310221048999999985210111046799997433787786565654358999-9
Q gi|254780805|r  117 DNKSSLE-----------IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR-E  184 (300)
Q Consensus       117 ~d~~~~~-----------~~l~EN~~R~dl~p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~LrLl~L~~~i~-~  184 (300)
                      +|++...           .+++||+||++|+|+|+|.+|+++.     +++..++.+|+++++|+|.+++++++..++ .
T Consensus        83 ~de~~~~~~~~~~~~~~~~~~ien~~r~~l~~ieea~~~~~~~-----~~~~~~~~~gk~~~~i~~~lr~~~l~~~~l~~  157 (232)
T d1vk1a_          83 FDEGVKVYTWYPAFKGDVNKVIERLKAEGLEVIEDEKAEEKAE-----KGEIAFALIGEKSFAIPGGLEEQKKVSKVLDE  157 (232)
T ss_dssp             TSTTCEEECCEEEEESCHHHHHHHHHHTTCCCEECTTHHHHHH-----TTSSSEEEESSSEEEECCSHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             9778887654201301467899999987565766653035665-----78899998473088774057765508999999


Q ss_pred             HHHHHHCCHHHHHHHHHCCH---HHHHHHHHHHCCCCHHHHHHHHHHHHCCC
Q ss_conf             87642101677777640100---46899997422247789999997641022
Q gi|254780805|r  185 MIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKK  233 (300)
Q Consensus       185 ~l~~~~is~ghar~Ll~~~~---~~~la~~Ii~~~LSVRe~E~lVk~~~~~~  233 (300)
                      +...|.++.+|++++....+   +.+++..++.+.||||++|++|++.....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~lsvre~e~~vk~~~~~~  209 (232)
T d1vk1a_         158 MDQAKEIELVYYGLKEDAKADMEKGEIDYVFIRKAPTKEEVMELVKRGEVFS  209 (232)
T ss_dssp             HHHTTSSEEEEESCHHHHHHHHHTTSCSEEEECCCCCHHHHHHHHHTTCCBS
T ss_pred             HHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
T ss_conf             9862213187552435455678765599999864799999999998356689

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: ParB/Sulfiredoxin
superfamily: ParB/Sulfiredoxin
family: Hypothetical protein PF0380
domain: Hypothetical protein PF0380
species: Pyrococcus furiosus [TaxId: 2261]