HHSEARCH alignment of GI: 254780805 and SCOP domain: d1vz0a2

Alignment
>d1vz0a2 d.268.1.1 (A:23-115) Putative partitioning protein ParB/Spo0J {Thermus thermophilus [TaxId: 274]}
Probab=99.94  E-value=3.3e-28  Score=198.27  Aligned_cols=93  Identities=45%  Similarity=0.833  Sum_probs=89.2

Q ss_pred             CEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             02403898235789998768988999999988631001550462056544533357567777764210013543334641
Q gi|254780805|r   39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN  118 (300)
Q Consensus        39 ~~~i~i~~i~~~p~~pR~~~~~~~l~eLa~SI~~~G~lqPi~Vr~~~~g~y~ii~G~rR~rAa~~~g~~~ip~iv~~~~d  118 (300)
                      +.+||+++|.|||+|||+.|+++++++|+.||+++|++||++|++.++ +|+|++|||||+||+.+|+++|||+|++++|
T Consensus         1 I~~Ipi~~i~~~p~npR~~~~~~~i~~L~~sI~~~G~~~Pi~V~~~~~-~y~ii~G~rR~~A~k~lg~~~ip~~v~~~~d   79 (93)
T d1vz0a2           1 VVRLPLASIRPNPRQPRKRFAEESLKELADSIREKGLLQPLLVRPQGD-GYELVAGERRYRAALMAGLQEVPAVVKDLTD   79 (93)
T ss_dssp             CEEEEGGGEECCCCCHHHHHHHHHHHHHHHHHHHHCCSSCEEEEEETT-EEEEEECHHHHHHHHHHTCSEEEEEECCCCH
T ss_pred             CEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC-CEEEEEEHHHHHHHHHCCCCEEEEEEEECCH
T ss_conf             969778997359889987589999999999998377774269998299-3599962657877776699666699974998


Q ss_pred             HHHHHHHHHHHHHC
Q ss_conf             12345566654310
Q gi|254780805|r  119 KSSLEIAIVENVQR  132 (300)
Q Consensus       119 ~~~~~~~l~EN~~R  132 (300)
                      .++..++++||+||
T Consensus        80 ~~a~~~~l~eN~~R   93 (93)
T d1vz0a2          80 REALELALVENLQR   93 (93)
T ss_dssp             HHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHCCC
T ss_conf             99999999987079


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: ParB/Sulfiredoxin
superfamily: ParB/Sulfiredoxin
family: ParB-like nuclease domain
domain: Putative partitioning protein ParB/Spo0J
species: Thermus thermophilus [TaxId: 274]