HHSEARCH alignment of GI: 254780805 and SCOP domain: d1y9qa1

Alignment

Probab=92.01  E-value=0.06  Score=29.57  Aligned_cols=35  Identities=20%  Similarity=0.264  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999985210111046799997433787786565
Q gi|254780805|r  140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR  174 (300)
Q Consensus       140 ~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~Lr  174 (300)
                      -+.-++.+....|+||+++|+.+|.|+++|+++.+
T Consensus         9 ig~~lr~~R~~~g~sq~~lA~~~gis~~~i~~~E~   43 (79)
T d1y9qa1           9 IANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIER   43 (79)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHHHHSSCHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHC
T ss_conf             99999999998299999999987711648999986

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: Probable transcriptional regulator VC1968, N-terminal domain
domain: Probable transcriptional regulator VC1968, N-terminal domain
species: Vibrio cholerae [TaxId: 666]