HHSEARCH alignment of GI: 254780805 and SCOP domain: d2o38a1

Alignment
>d2o38a1 a.35.1.13 (A:28-116) Hypothetical protein RPA3824 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=95.08  E-value=0.01  Score=34.45  Aligned_cols=38  Identities=16%  Similarity=0.220  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             48999999985210111046799997433787786565
Q gi|254780805|r  137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR  174 (300)
Q Consensus       137 p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~Lr  174 (300)
                      -.+.+..+++++...||||.++|+++|.++++|++..+
T Consensus         9 k~~l~~~i~~~r~~~gltq~~lA~~~gis~~~is~ie~   46 (89)
T d2o38a1           9 KLRLAYALNAVIDRARLSQAAAAARLGINQPKVSALRN   46 (89)
T ss_dssp             HHHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999999999599999999999733708999984


SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: NE1354
domain: Hypothetical protein RPA3824
species: Rhodopseudomonas palustris [TaxId: 1076]