HHSEARCH alignment of GI: 254780805 and SCOP domain: d2r1jl1

Alignment

Probab=92.55  E-value=0.047  Score=30.29  Aligned_cols=34  Identities=18%  Similarity=0.188  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999985210111046799997433787786565
Q gi|254780805|r  141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR  174 (300)
Q Consensus       141 A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~Lr  174 (300)
                      +..++++....|+||.++|+.+|.|+++++++.+
T Consensus         5 g~rik~~R~~~g~tq~~lA~~~gvs~~~i~~~e~   38 (66)
T d2r1jl1           5 GERIRARRKKLKIRQAALGKMVGVSNVAISQWER   38 (66)
T ss_dssp             HHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHC
T ss_conf             9999999998599999999997989999999986

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: Phage repressors
domain: P22 C2 repressor, DNA-binding domain
species: Salmonella bacteriophage P22 [TaxId: 10754]