BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780805|ref|YP_003065218.1| chromosome partitioning
protein B [Candidatus Liberibacter asiaticus str. psy62]
(300 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780805|ref|YP_003065218.1| chromosome partitioning protein B [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040482|gb|ACT57278.1| chromosome partitioning protein B [Candidatus Liberibacter
asiaticus str. psy62]
Length = 300
Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 300/300 (100%), Positives = 300/300 (100%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES
Sbjct: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS
Sbjct: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS
Sbjct: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF
Sbjct: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFEY 300
EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFEY
Sbjct: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFEY 300
>gi|222150242|ref|YP_002551199.1| chromosome partitioning protein [Agrobacterium vitis S4]
gi|221737224|gb|ACM38187.1| chromosome partitioning protein [Agrobacterium vitis S4]
Length = 292
Score = 186 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 159/293 (54%), Positives = 215/293 (73%), Gaps = 4/293 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q + P ++ + + + I + NP NPR YF+
Sbjct: 1 MNDDISKRRLGRGLAALIGEMDQPV--PVDESRAVVSADRMVPIEFVSRNPRNPRRYFDE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI+ HGI+QP++VR I G Y+IIAGERR+RAA++A L E+PVI+R+VD+++
Sbjct: 59 TVLQELAGSIRQHGIVQPVVVRTIATGRYEIIAGERRWRAAQLAGLVEIPVIVRDVDDRT 118
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+AIVENVQR DLNPLEEA+GYEQLI+E+GYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 119 ALELAIVENVQRADLNPLEEAMGYEQLIAEHGYTQNDLGEIIGKSRSHVANSLRLLKLPD 178
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
VR+M+ +S GHAR LVSTSDP SLA+ IVSK MSVRD E L Q ++ K + +
Sbjct: 179 PVRDMLADGSLSAGHARALVSTSDPNSLARQIVSKGMSVRDAERLAQ--NDIKGQGQPKP 236
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ K+ LE+ +S ++GL++SI H+ GQ I Y+T EQL+ IC LL
Sbjct: 237 HVAPAKDSDTVALERSLSDRLGLDVSINHKGGGGQLRINYKTLEQLEEICRLL 289
>gi|222087925|ref|YP_002546463.1| chromosome partitioning protein B [Agrobacterium radiobacter K84]
gi|221725373|gb|ACM28529.1| chromosome partitioning protein B [Agrobacterium radiobacter K84]
Length = 294
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 161/293 (54%), Positives = 207/293 (70%), Gaps = 2/293 (0%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q + P+ + I I NP NPR YF+
Sbjct: 1 MNDDLSKRRLGRGLAALIGEMDQPTPVEAGRPGVNPD--RMVPIEFISRNPKNPRRYFDE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L DL SI+ HGI+QP++VR + Y+IIAGERR+RAA++A L E+PVI+R+VD+K+
Sbjct: 59 TELHDLASSIRQHGIVQPVVVRTVSADRYEIIAGERRWRAAQLAGLIEIPVIVRDVDDKT 118
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLNPLEEALGYEQLI+E+GYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 119 ALEIAIVENVQRADLNPLEEALGYEQLIAEHGYTQNDLGEIIGKSRSHVANSLRLLKLPE 178
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
VR+M+ +S GHAR LVSTSDP +LA+ IVSK MSVRD E L Q + +
Sbjct: 179 PVRDMLAGGSLSAGHARALVSTSDPATLARTIVSKGMSVRDAERLAQNDIKAQNDPRPAS 238
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ LE+ +S +GL+++I HR N GQ I Y+T EQL+ IC LL
Sbjct: 239 ARKDDKDSDTLALERTLSDTLGLDVAINHRGNGGQVKISYKTLEQLEEICRLL 291
>gi|218682743|ref|ZP_03530344.1| putative chromosome partitioning protein [Rhizobium etli CIAT 894]
Length = 293
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 159/293 (54%), Positives = 212/293 (72%), Gaps = 3/293 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q + ++T + I I + NP NPR +F+
Sbjct: 1 MNDDVSKRRLGRGLAALIGEMDQPVPVEAERTVSAD---RMIPIEFVSRNPRNPRRFFDD 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L DL SI+ HGI+QP++VR +D Y+IIAGERR+RAA++A L E+PVIIR+VD+K+
Sbjct: 58 AELHDLASSIRQHGIVQPIVVRTMDRDRYEIIAGERRWRAAQLAGLIEIPVIIRDVDDKT 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLN LEEALGYEQLI+EYGYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 118 ALEIAIVENVQRADLNALEEALGYEQLIAEYGYTQNDLGEIIGKSRSHVANSLRLLKLPD 177
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
VR+++ +S GHAR LVSTSDP SLA+ IV+K MSVRD E+L Q + + ++
Sbjct: 178 PVRDLLAAGSLSAGHARALVSTSDPASLARTIVAKGMSVRDAEKLAQNNIKAQSEPQQPA 237
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ LE+ +S +GL++SI H+ + GQ I Y++ EQL+ IC LL
Sbjct: 238 LRQDQKDSDTLALERTLSDALGLDVSINHKTSGGQIKISYKSLEQLEEICRLL 290
>gi|86359697|ref|YP_471589.1| chromosome partitioning protein B [Rhizobium etli CFN 42]
gi|86283799|gb|ABC92862.1| chromosome partitioning protein B [Rhizobium etli CFN 42]
Length = 293
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 161/293 (54%), Positives = 211/293 (72%), Gaps = 3/293 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q I ++T + I I + NP NPR +F+
Sbjct: 1 MNDDVSKRRLGRGLAALIGEMDQPIPVEAERTVSAD---RMIPIEFVSRNPRNPRRFFDD 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L DL SI+ HGI+QP++VR + Y+IIAGERR+RAA++A L E+PVIIR+VD+K+
Sbjct: 58 TELHDLASSIRQHGIVQPIVVRTMSQDRYEIIAGERRWRAAQLAGLIEIPVIIRDVDDKT 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLNPLEEALGYEQLI+EYGYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 118 ALEIAIVENVQRADLNPLEEALGYEQLIAEYGYTQNDLGEIIGKSRSHVANSLRLLKLPE 177
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
VR+++ +S GHAR LVSTSDP SLA+ IV+K MSVRD E+L Q + + ++
Sbjct: 178 PVRDLLAAGSLSAGHARALVSTSDPASLARTIVAKGMSVRDAEKLAQNNIRAQSEPQQPV 237
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ LE+ +S +GL ++I HRN GQ I Y++ EQL+ IC LL
Sbjct: 238 LRRDQKDSDTLALERTLSDALGLEVAINHRNGGGQIKIAYKSLEQLEEICRLL 290
>gi|327191204|gb|EGE58247.1| chromosome partitioning protein B [Rhizobium etli CNPAF512]
Length = 293
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 158/293 (53%), Positives = 212/293 (72%), Gaps = 3/293 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q + ++T + I I + NP NPR +F+
Sbjct: 1 MNDDVSKRRLGRGLAALIGEMDQPVPVEAERTVSAD---RMIPIEFVSRNPRNPRRFFDD 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L DL SI+ HGI+QP++VR ++ Y+IIAGERR+RAA++A L E+PVIIR+VD+K+
Sbjct: 58 TELHDLASSIRQHGIVQPIVVRTMERDRYEIIAGERRWRAAQLAGLIEIPVIIRDVDDKT 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLNPLEEALGYEQLI+EYGYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 118 ALEIAIVENVQRADLNPLEEALGYEQLIAEYGYTQNDLGEIIGKSRSHVANSLRLLKLPD 177
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
VR+++ +S GHAR LVST DP SLA+ IV+K MSVRD E+L Q + + ++
Sbjct: 178 PVRDLLAAGSLSAGHARALVSTPDPASLARTIVAKGMSVRDAEKLAQNNIKAQSEPQQSA 237
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ LE+ +S +GL++SI H+ + GQ I Y++ EQL+ IC LL
Sbjct: 238 LRRDQKDSDTLALERTLSDALGLDVSINHKTSGGQIKISYKSLEQLEEICRLL 290
>gi|190893975|ref|YP_001980517.1| chromosome partitioning protein B [Rhizobium etli CIAT 652]
gi|190699254|gb|ACE93339.1| chromosome partitioning protein B [Rhizobium etli CIAT 652]
Length = 293
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 158/293 (53%), Positives = 211/293 (72%), Gaps = 3/293 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q + ++T + I I + NP NPR +F+
Sbjct: 1 MNDDVSKRRLGRGLAALIGEMDQPVPVEAERTVSAD---RMIPIEFVSRNPRNPRRFFDD 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L DL SI+ HGI+QP++VR ++ Y+IIAGERR+RAA++A L E+PVIIR+VD+K+
Sbjct: 58 TELHDLASSIRQHGIVQPIVVRTMERDRYEIIAGERRWRAAQLAGLIEIPVIIRDVDDKT 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLNPLEEALGYEQLI+EYGYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 118 ALEIAIVENVQRADLNPLEEALGYEQLIAEYGYTQNDLGEIIGKSRSHVANSLRLLKLPD 177
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
VR+++ +S GHAR LVST DP SLA+ IV+K MSVRD E+L Q + + ++
Sbjct: 178 PVRDLLAAGSLSAGHARALVSTPDPASLARTIVAKGMSVRDAEKLAQNNIKAQSEPQQSA 237
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ LE+ +S +GL++SI H+ GQ I Y++ EQL+ IC LL
Sbjct: 238 LRRDQKDSDTLALERTLSDALGLDVSINHKTTGGQIKISYKSLEQLEEICRLL 290
>gi|209551498|ref|YP_002283415.1| parB-like partition protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537254|gb|ACI57189.1| parB-like partition protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 293
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 154/293 (52%), Positives = 209/293 (71%), Gaps = 3/293 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q + ++T + I I + NP NPR +F+
Sbjct: 1 MNDDVSKRRLGRGLAALIGEMDQPVPVEAERTISAD---RMIPIEFVSRNPRNPRRFFDD 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L DL SI+ HGI+QP++VR ++ Y+IIAGERR+RAA++A L E+P I+R+VD+K+
Sbjct: 58 AELHDLASSIRQHGIVQPIVVRTMERDRYEIIAGERRWRAAQLAGLIEIPGIVRDVDDKT 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLNPLEEALGYEQLI+EYGYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 118 ALEIAIVENVQRADLNPLEEALGYEQLIAEYGYTQNDLGEIIGKSRSHVANSLRLLKLPD 177
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
VR+++ +S GHAR LVST DP LA+ IV+K MSVRD E+L Q + + +
Sbjct: 178 PVRDLLAAGSLSAGHARALVSTPDPAGLARTIVAKGMSVRDAEKLAQNNIKAQSEPQLAA 237
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ LE+ +S +GL+++I H+ + GQ I Y++ EQL+ IC LL
Sbjct: 238 SRRDQKDSDTLALERTLSDALGLDVAINHKTSGGQIKISYKSLEQLEEICRLL 290
>gi|84501191|ref|ZP_00999396.1| chromosome partitioning protein parB [Oceanicola batsensis
HTCC2597]
gi|84390482|gb|EAQ02970.1| chromosome partitioning protein parB [Oceanicola batsensis
HTCC2597]
Length = 297
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 120/297 (40%), Positives = 187/297 (62%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDC-ISIHSIVPNPHNPRNYFE 59
MS R LGRGL+AL+ +VN + + E+ P D + I + PNP PR F
Sbjct: 1 MSKIQKNRGLGRGLSALMADVNADQPTATAEVESAPRRPDMMVPIEQVTPNPDQPRRSFT 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ L++L SI+ G+IQPLIVR Y+I+AGERR+RAA+MA L E+PV++R D+
Sbjct: 61 QDQLDELASSIREKGVIQPLIVRQKG-ENYEIVAGERRWRAAQMAKLHEIPVLLREYDDT 119
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+EN+QR DLNP+EEA GY QL+ +G+TQ + +GKSRS++AN+LR+L LP
Sbjct: 120 EVLEVAIIENIQRADLNPVEEAAGYRQLMDRFGHTQEKLAEALGKSRSYIANLLRLLNLP 179
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+E++ ++S GHAR L+++ P +LA +V+ +SVR+TE+L + + + K
Sbjct: 180 EDVQELLTSGKLSAGHARALITSESPSALAARVVAGGLSVRETEKLATQGKTESKPSGK- 238
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLLG 294
+ + EK+ LE +S+ +G+ +++ H++ G IKY ++L +CS+L
Sbjct: 239 -KSAPEKDADTRALEGDLSAALGMKVAVNHQDGSDGGSVTIKYGNLDELDRLCSVLS 294
>gi|116254459|ref|YP_770297.1| chromosome partitioning protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115259107|emb|CAK10218.1| putative chromosome partitioning protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 293
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 156/293 (53%), Positives = 210/293 (71%), Gaps = 3/293 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q + ++T + I I + NP NPR +F+
Sbjct: 1 MNDDVSKRRLGRGLAALIGEMDQPVPVEAERTISAD---RMIPIEFVSRNPRNPRRFFDD 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L DL SI+ HGI+QP++VR + Y+IIAGERR+RAA++A L E+PVIIR+VD+K+
Sbjct: 58 SELHDLASSIRQHGIVQPIVVRTMSRDRYEIIAGERRWRAAQLAGLIEIPVIIRDVDDKT 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLN LEEALGYEQLI+EYGYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 118 ALEIAIVENVQRADLNALEEALGYEQLIAEYGYTQNDLGEIIGKSRSHVANSLRLLKLPD 177
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
VR+++ +S GHAR LVSTSDP LA+ IV+K MSVRD E+L Q + + ++
Sbjct: 178 PVRDLLAAGSLSAGHARALVSTSDPAGLARTIVAKGMSVRDAEKLAQNNIKAQSEPQQAA 237
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ LE+ +S +GL+++I H+ + GQ I Y++ EQL+ IC LL
Sbjct: 238 LRRDQKDSDTLALERTLSDALGLDVAINHKASGGQIKISYKSLEQLEEICRLL 290
>gi|241206936|ref|YP_002978032.1| parB-like partition protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860826|gb|ACS58493.1| parB-like partition protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 293
Score = 181 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 155/293 (52%), Positives = 208/293 (70%), Gaps = 3/293 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q + E + + I I + NP NPR +F+
Sbjct: 1 MNDDVSKRRLGRGLAALIGEMDQPVPVE---AERVISADRMIPIEFVSRNPRNPRRFFDD 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L DL SI+ HGI+QP++VR + Y+IIAGERR+RAA++A L E+ VI+R+VD+K+
Sbjct: 58 SELHDLASSIRQHGIVQPIVVRTMSRDRYEIIAGERRWRAAQLAGLIEIAVIVRDVDDKT 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLN LEEALGYEQLI+EYGYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 118 ALEIAIVENVQRADLNALEEALGYEQLIAEYGYTQNDLGEIIGKSRSHVANSLRLLKLPD 177
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
VR+++ +S GHAR LVSTSDP SLA+ IV+K MSVRD E+L Q + + +
Sbjct: 178 PVRDLLASGSLSAGHARALVSTSDPASLARTIVAKGMSVRDAEKLAQNNIKAQSEPLQAT 237
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ LE+ +S +GL+++I H+ + GQ I Y++ EQL+ IC LL
Sbjct: 238 LQRDQKDSDTLALERTLSDALGLDVAINHKASGGQIKISYKSLEQLEEICRLL 290
>gi|15967087|ref|NP_387440.1| chromosome partitioning protein ParB [Sinorhizobium meliloti 1021]
gi|307302549|ref|ZP_07582306.1| parB-like partition protein [Sinorhizobium meliloti BL225C]
gi|307316120|ref|ZP_07595564.1| parB-like partition protein [Sinorhizobium meliloti AK83]
gi|15076360|emb|CAC47913.1| Probable chromosome partitioning protein ParB [Sinorhizobium
meliloti 1021]
gi|306897960|gb|EFN28702.1| parB-like partition protein [Sinorhizobium meliloti AK83]
gi|306903219|gb|EFN33809.1| parB-like partition protein [Sinorhizobium meliloti BL225C]
Length = 296
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 152/294 (51%), Positives = 209/294 (71%), Gaps = 2/294 (0%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q + + TI + I I + NP NPR F+
Sbjct: 1 MNDDSSKRRLGRGLAALIGEMDQPLHTGAAPAATI-SADRRIPIEFVSRNPRNPRRQFDE 59
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L+DL SI+ HGI+QP++VR I + Y+IIAGERR+RAA++A +E+PVI+R+VD+++
Sbjct: 60 AELQDLASSIRQHGIVQPVVVRTIGHERYEIIAGERRWRAAQLAGFTEIPVIVRDVDDRT 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLNPLEEALGYEQLI+E+GYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 120 ALEIAIVENVQRSDLNPLEEALGYEQLIAEHGYTQNDLGDIIGKSRSHVANSLRLLKLPE 179
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE-QDNKKEKRKKI 239
VR+M+ +S GHAR L+ TSDP++LA+ +VSK +SVR+ E L Q ++ +
Sbjct: 180 PVRDMLSDGSLSAGHARALIPTSDPVALARAVVSKGLSVREAERLAQNDIKSQNDPNYAK 239
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
EK+ LE+ +S +GL +S+ H+ + G I Y+T +QL+ IC LL
Sbjct: 240 GRQREEKDADTLALERTLSDSLGLEVSVNHKASGGHLKITYKTLDQLEEICRLL 293
>gi|126730100|ref|ZP_01745912.1| chromosome partitioning protein parB [Sagittula stellata E-37]
gi|126709480|gb|EBA08534.1| chromosome partitioning protein parB [Sagittula stellata E-37]
Length = 311
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 133/301 (44%), Positives = 196/301 (65%), Gaps = 9/301 (2%)
Query: 1 MSNNY-SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ ++R LGRGL+AL+ +V + DS ++ P+ + I + PNP PR F
Sbjct: 10 MAEKKENRRGLGRGLSALMADVTPAPDSAPQEGPRRPD--RLLPIEQLRPNPDQPRRTFT 67
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L+DL SI++ G+IQPLIVR D +Y+I+AGERR+RAA+MA L EVPV++R+ +
Sbjct: 68 QEHLDDLANSIRTKGVIQPLIVRQDPDDPSMYEIVAGERRWRAAQMAQLHEVPVLVRDFN 127
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ LEIAI+EN+QR DLNP+EEA GY QL+ ++G+TQ + +GKSRSH+AN++R+L
Sbjct: 128 DTEVLEIAIIENIQRADLNPMEEAAGYRQLMFKFGHTQEKLAEALGKSRSHIANLMRLLN 187
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP SV+ M+ + +S GHAR L++ +P LA+ IV K +SVRDTE+LV+ N + RK
Sbjct: 188 LPESVQGMVSEGTLSAGHARALITAPNPEVLAKTIVDKGLSVRDTEKLVKSGPNPDKPRK 247
Query: 238 KIFEGS--REKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLL 293
+G+ EK+ LE +S+ +G+ + I H+ KG+ I Y+T E L +C LL
Sbjct: 248 PSTDGAFQMEKDADTKALEGDLSAALGMKVQIDHKPGQEKGRISISYDTLEHLDALCGLL 307
Query: 294 G 294
Sbjct: 308 S 308
>gi|260428884|ref|ZP_05782861.1| chromosome-partitioning protein ParB [Citreicella sp. SE45]
gi|260419507|gb|EEX12760.1| chromosome-partitioning protein ParB [Citreicella sp. SE45]
Length = 301
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 127/299 (42%), Positives = 191/299 (63%), Gaps = 6/299 (2%)
Query: 1 MSNNY-SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M++ +R LGRGL+AL+ +V+ + + E + T + I S+VPN PR F
Sbjct: 1 MADKKEQRRGLGRGLSALMSDVD-LVPAQEAEQTTPRSPDRLVPIESVVPNKDQPRRTFT 59
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ L +L +SI++ GI+QP+IVR G ++I+AGERR+RAA++A L EVPV++R++D
Sbjct: 60 EDHLRELSESIRAKGILQPIIVRPAPGSEGQFEIVAGERRWRAAQLAQLHEVPVLVRDLD 119
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ +LEIAI+EN+QR DLN +EEA GY+QL+ +G+TQ I +GKSRSH+AN+LR+L
Sbjct: 120 DQETLEIAIIENIQRADLNAIEEAAGYKQLMFRFGHTQEKIAEALGKSRSHIANLLRLLN 179
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP V+E +R E+S GHARTLV+ DP ++AQ I+ KK+SVR E L++ + +R
Sbjct: 180 LPEGVQEHVRNGELSAGHARTLVTARDPETMAQQIMDKKLSVRQAEALLRAESQPPRQRP 239
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
EK+ LE +S+ VG+ +SI ++ G I Y EQL +C +L
Sbjct: 240 DPASYPMEKDADTRALEGDLSAAVGMKVSISNKPGAESGTLTISYNNFEQLDALCMILS 298
>gi|227823852|ref|YP_002827825.1| ParB-like partition protein [Sinorhizobium fredii NGR234]
gi|227342854|gb|ACP27072.1| ParB-like partition protein [Sinorhizobium fredii NGR234]
Length = 296
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 149/294 (50%), Positives = 206/294 (70%), Gaps = 2/294 (0%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q + S + + I + NP NPR F+
Sbjct: 1 MNDDSSKRRLGRGLAALIGEMDQPLQSGAAPASPVNPD-RRVPIEFVSRNPRNPRRQFDE 59
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L+DL SI+ HGI+QP++ R + + Y+IIAGERR+RAA++A +E+PVI+R+VD+++
Sbjct: 60 AELQDLASSIRQHGIVQPVVARTVGHDRYEIIAGERRWRAAQLAGFTEIPVIVRDVDDRT 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLNPLEEALGYEQLI+E+GYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 120 ALEIAIVENVQRSDLNPLEEALGYEQLIAEHGYTQNDLGDIIGKSRSHVANSLRLLKLPE 179
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE-QDNKKEKRKKI 239
VR+M+ +S GHAR LV TSDP++LA+ IV+K +SVR+TE L Q + +
Sbjct: 180 PVRDMLSDGSLSAGHARALVPTSDPVALARSIVAKGLSVRETERLAQHDIKAQNDPNFAK 239
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
EK+ LE+ +S +GL +++ H+ + G I Y+T +QL+ IC LL
Sbjct: 240 VRPREEKDADTLALERTLSDSLGLEVTVSHKASGGHLRIAYKTLDQLEEICRLL 293
>gi|126738501|ref|ZP_01754206.1| chromosome partitioning protein parB [Roseobacter sp. SK209-2-6]
gi|126720300|gb|EBA17006.1| chromosome partitioning protein parB [Roseobacter sp. SK209-2-6]
Length = 298
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 122/300 (40%), Positives = 182/300 (60%), Gaps = 7/300 (2%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
MS +K R LGRGL+AL+ +VN D + ++ S+ + I + NP PR F
Sbjct: 1 MSEKKTKPRGLGRGLSALMADVNP--DPVSTENQSPRNSEVLVPIEKVQANPDQPRRQFL 58
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L+DL SIK G++QPLIVR G+Y+I+AGERR+RAA+ A L EVPV+IR+ +
Sbjct: 59 QEDLDDLTASIKEKGVLQPLIVRPRPTGIYEIVAGERRWRAAQAAQLHEVPVLIRDYSDL 118
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+EN+QR DLN +EEA Y+QL+ +G+TQ + +GKSRSH+AN++R+L LP
Sbjct: 119 EMLEVAIIENIQRSDLNAMEEAQSYKQLMERFGHTQEKMAEALGKSRSHIANLVRLLHLP 178
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
VR ++ ++S GHAR L+++ + LA+ IV +SVR TE LV++ K
Sbjct: 179 EDVRNLVHDRKLSAGHARALITSDNASELAKKIVKGGLSVRATEALVKKDAAGDSTPSKP 238
Query: 240 F--EGSREKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLGE 295
EK+ LE +S+ + + +SI H KG I Y++ +QL +C++L +
Sbjct: 239 RSARKPVEKDADTRALEGDLSAILRMKVSIDHVAGGEKGSITINYDSLDQLDELCNILSK 298
>gi|163745107|ref|ZP_02152467.1| chromosome partitioning protein parB [Oceanibulbus indolifex
HEL-45]
gi|161381925|gb|EDQ06334.1| chromosome partitioning protein parB [Oceanibulbus indolifex
HEL-45]
Length = 299
Score = 176 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 123/300 (41%), Positives = 188/300 (62%), Gaps = 9/300 (3%)
Query: 1 MSNNY-SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M++ KR LGRGL+AL+ +V ++ + ++ + I I PNP PR FE
Sbjct: 1 MADKQERKRGLGRGLSALMADVA---ETESVAAKGAGAAEQFVPIERIKPNPDQPRKRFE 57
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L+DL SI+ G+IQPLIVRA+ +G ++I+AGERR+RA+++A + +PVI+R +
Sbjct: 58 QENLDDLAASIREKGVIQPLIVRAMSDGNFEIVAGERRWRASQIAKIHSLPVIVREFTDV 117
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+EN+QR DLN +EEA GY QL+ ++G+TQ + +GKSRSH+AN+LR+L LP
Sbjct: 118 EVLEVAIIENIQRADLNSVEEAAGYRQLMDKFGHTQEKMAEALGKSRSHIANLLRLLNLP 177
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE---QDNKKEKR 236
V+EM+R+ E+S GHAR L+ DP+ LAQ ++ +SVR TE LV++ +
Sbjct: 178 EPVQEMVRQSELSAGHARALIPAKDPMKLAQQVIKGGLSVRATEALVKKDHAGERDNMVN 237
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLLG 294
+EK+ LE +S+ +GL + + H+ + G+ + Y + +QL IC LLG
Sbjct: 238 NARLSQRKEKDADTQALEGDLSANLGLKVELDHKPGQEAGKVTLHYTSLDQLDEICRLLG 297
>gi|150398393|ref|YP_001328860.1| parB-like partition protein [Sinorhizobium medicae WSM419]
gi|150029908|gb|ABR62025.1| parB-like partition protein [Sinorhizobium medicae WSM419]
Length = 296
Score = 176 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 148/294 (50%), Positives = 208/294 (70%), Gaps = 2/294 (0%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SKRRLGRGLAALIGE++Q + + + + I I + NP NPR F+
Sbjct: 1 MNDDSSKRRLGRGLAALIGEMDQPLQTGSAPVSPV-SADRRIPIEFVSRNPRNPRRQFDE 59
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L+DL SI+ HGI+QP++VR I + Y+IIAGERR+RAA++A +E+PVI+R+VD+++
Sbjct: 60 AELQDLASSIRQHGIVQPVVVRTIGSDRYEIIAGERRWRAAQLAGFTEIPVIVRDVDDRT 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLNPLEEALGYEQLI+E+GYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 120 ALEIAIVENVQRSDLNPLEEALGYEQLIAEHGYTQNDLGDIIGKSRSHVANSLRLLKLPE 179
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE-QDNKKEKRKKI 239
VR+M+ +S GHAR L+ TSDP++LA+ +V+K +SVR+ E L Q ++ +
Sbjct: 180 PVRDMLSDGSLSAGHARALIPTSDPVALARAVVAKGLSVREVERLAQNDIRSQNDPNYAK 239
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
EK+ LE+ +S +GL +++ H+ + G I Y+T +QL+ IC LL
Sbjct: 240 ARQRDEKDADTLALERTLSDSLGLEVTVNHKASGGHLKITYKTLDQLEEICRLL 293
>gi|307297006|ref|ZP_07576822.1| parB-like partition protein [Sphingobium chlorophenolicum L-1]
gi|306877532|gb|EFN08760.1| parB-like partition protein [Sphingobium chlorophenolicum L-1]
Length = 305
Score = 176 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 113/297 (38%), Positives = 186/297 (62%), Gaps = 4/297 (1%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVN-QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M + + LGRGL+AL+G+V + +P T ++ I + I P+P PR +F
Sbjct: 6 MMKSAKRPHGLGRGLSALLGDVAREEPVTPSAATPPSTKTIQSIEVALIQPHPEQPRRHF 65
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ L++L SI G+IQP+IVR G ++I+AGERR+RAA+ A L +P I+R+ D
Sbjct: 66 DDGALQELADSIAKRGVIQPIIVRPHGGG-FQIVAGERRWRAAQRAQLHRIPAIVRDFDE 124
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LEIA++EN+QR+DLNP+EEA Y +LI+E+ ++Q +G +VGKSRSHVAN++R+L L
Sbjct: 125 AETLEIALIENIQREDLNPIEEAEAYRKLIAEFHHSQEALGRLVGKSRSHVANLMRLLDL 184
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P+ V++ + + ++S+GHAR L+ D +LA+ + S+ +SVRDTE+LV+ + +
Sbjct: 185 PAPVQQQVIERKLSMGHARALIGAPDCENLARTVESRGLSVRDTEQLVRRARKGDDAPSR 244
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
RE + + LE+ ++ +G+ ++I + G + Y T +QL ++C L
Sbjct: 245 RQPVPRENDPDIAALEQHLADILGVKVAIDYGQGGGGALTLHYSTLDQLDMLCQRLS 301
>gi|315122028|ref|YP_004062517.1| chromosome partitioning protein B [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495430|gb|ADR52029.1| chromosome partitioning protein B [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 298
Score = 175 bits (442), Expect = 7e-42, Method: Composition-based stats.
Identities = 220/295 (74%), Positives = 255/295 (86%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MSNN SKRRLGRGLAALIGEVNQ DS EKKTE E Q+ ISIHSIVPNPHNPR+ F+S
Sbjct: 1 MSNNNSKRRLGRGLAALIGEVNQPTDSYEKKTEKPSEYQNHISIHSIVPNPHNPRDCFDS 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L +SI SHGI+QP+IVR +DNGLYKIIAGERRFRAAK ASLS++PVIIR++D+K
Sbjct: 61 EELEELSKSILSHGILQPIIVREVDNGLYKIIAGERRFRAAKKASLSKIPVIIRDIDDKH 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND+GSI+GKSRSH++NILRILKLP
Sbjct: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDLGSIIGKSRSHISNILRILKLPD 180
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
SV++MI K E+SLGHAR L+ TSDPLSLA++I+SKKMSVRDTEELV+E +NK KK F
Sbjct: 181 SVKKMILKGELSLGHARALILTSDPLSLAEIIISKKMSVRDTEELVKETENKGINLKKSF 240
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ LEKKISSK+GLN+SIKH NN+GQ CIKY+TNEQL +ICSLL +
Sbjct: 241 KKDVVQKNDFAILEKKISSKLGLNVSIKHLNNRGQVCIKYKTNEQLDLICSLLEK 295
>gi|163844076|ref|YP_001628480.1| ParB-like partition protein [Brucella suis ATCC 23445]
gi|163674799|gb|ABY38910.1| ParB-like partition protein [Brucella suis ATCC 23445]
Length = 293
Score = 175 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 136/297 (45%), Positives = 191/297 (64%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SK+RLGRGLAALIGE+ D P ++ + + I I + NP NPR F
Sbjct: 1 MNDDPSKKRLGRGLAALIGEI----DRPVEERKAPVAIERNIPIEFVTRNPRNPRRMFSE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LEDL QSIK HG++QP++VR +++IAGERR+RA++ A + +PVI+R+VD+
Sbjct: 57 TELEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWRASQRAGVDTIPVIVRDVDD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +LEIAI+ENVQR DLN +EEA+GY+QLI + YTQND+ ++GKSRSHVAN LR+LKL
Sbjct: 117 RVALEIAIIENVQRADLNSVEEAMGYQQLIDNHDYTQNDLAQVIGKSRSHVANTLRLLKL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ I +S GHAR+L++T +P +LA+ IV + +SVR E LVQ + + K
Sbjct: 177 PQRVQDFIVDGALSAGHARSLITTENPTALAERIVKEGLSVRQVEALVQAEARGGSEAKP 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
EK+ LEK +S G+ + I HR G I+Y + EQL IC L
Sbjct: 237 GKAAPAEKDADTKALEKLLSDVTGMKVEINHRERGGDVKIRYSSLEQLDEICRRLQS 293
>gi|110677823|ref|YP_680830.1| chromosome partitioning protein parB [Roseobacter denitrificans OCh
114]
gi|109453939|gb|ABG30144.1| chromosome partitioning protein parB [Roseobacter denitrificans OCh
114]
Length = 298
Score = 175 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 123/292 (42%), Positives = 177/292 (60%), Gaps = 7/292 (2%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
KR LGRGL+AL+ +V ++ P +P S I I I PNP PR F L+DL
Sbjct: 8 KRGLGRGLSALMSDVAEAESPP---APGVPMSNQKIPIDQISPNPDQPRKQFTDSDLDDL 64
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SIK G+IQPLIVR ++I+AGERR+RAA+ A L E+PV+IR + LE+AI
Sbjct: 65 TASIKEKGVIQPLIVRKTGVDQFEIVAGERRWRAAQRAQLHELPVVIREFTDVEVLEVAI 124
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR DLNP+EEA GY QL+ +G+TQ + +GKSRSH+AN+LR+L LP V +M+
Sbjct: 125 IENIQRADLNPIEEAAGYRQLMDRFGHTQEKMAEALGKSRSHIANLLRLLTLPDPVLQMV 184
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI--FEGSR 244
R+ +S GHAR L+ DPL LAQ IV +SVR E LV+++ + + + S
Sbjct: 185 REGGLSAGHARALIPAQDPLKLAQQIVKGGLSVRAAEALVKKERSSSDDAPRPAAKPASA 244
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
EK+ LE +S+ +G+ + + H+ G + Y++ + L +C +L
Sbjct: 245 EKDADTKALEGDLSASLGMKVELTHKPGHESGHMTLHYKSLDDLDELCRILS 296
>gi|325294198|ref|YP_004280062.1| chromosome partitioning protein [Agrobacterium sp. H13-3]
gi|325062051|gb|ADY65742.1| chromosome partitioning protein [Agrobacterium sp. H13-3]
Length = 293
Score = 175 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 155/295 (52%), Positives = 207/295 (70%), Gaps = 3/295 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS++ SKRRLGRGLAALIGE++Q + P + + + I I I + NPR +F+
Sbjct: 1 MSDDLSKRRLGRGLAALIGEMDQPV--PVGEPQRAVSADRAIPIEFIARSQRNPRRHFDE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L+DL SI+ HGI+QP++VR I Y+IIAGERR+RAA++A ++VPVI+R+VD+++
Sbjct: 59 NELQDLASSIRQHGIVQPVVVRTIGVNRYEIIAGERRWRAAQLAGFTDVPVIVRDVDDRT 118
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+AIVENVQR DLNPLEEA+GYEQLI+E+GYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 119 ALELAIVENVQRSDLNPLEEAMGYEQLIAEHGYTQNDLGEIIGKSRSHVANSLRLLKLPD 178
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
VR+M+ +S GHAR LVSTSDP LA+ IVSK +SVRD E L Q + +
Sbjct: 179 PVRDMLADGSLSAGHARALVSTSDPSGLARTIVSKGLSVRDAERLAQNDIKSQGDVLE-K 237
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
S EK+ LE+ +S +GL++ I H+ GQ I Y T EQL+ +C LL +
Sbjct: 238 RPSAEKDSDTVALERSLSDALGLDVKISHKGGSGQIRIGYRTLEQLEAVCRLLEQ 292
>gi|23502906|ref|NP_699033.1| chromosome partitioning protein ParB [Brucella suis 1330]
gi|148558895|ref|YP_001259863.1| chromosome partitioning protein ParB [Brucella ovis ATCC 25840]
gi|161619972|ref|YP_001593859.1| parB-like partition protein [Brucella canis ATCC 23365]
gi|225626437|ref|ZP_03784476.1| ParB-like partition protein [Brucella ceti str. Cudo]
gi|254705059|ref|ZP_05166887.1| parB-like partition protein [Brucella suis bv. 3 str. 686]
gi|254707424|ref|ZP_05169252.1| parB-like partition protein [Brucella pinnipedialis M163/99/10]
gi|254709035|ref|ZP_05170846.1| parB-like partition protein [Brucella pinnipedialis B2/94]
gi|254713539|ref|ZP_05175350.1| parB-like partition protein [Brucella ceti M644/93/1]
gi|254716106|ref|ZP_05177917.1| parB-like partition protein [Brucella ceti M13/05/1]
gi|254718100|ref|ZP_05179911.1| parB-like partition protein [Brucella sp. 83/13]
gi|256030560|ref|ZP_05444174.1| parB-like partition protein [Brucella pinnipedialis M292/94/1]
gi|256060022|ref|ZP_05450204.1| parB-like partition protein [Brucella neotomae 5K33]
gi|256370456|ref|YP_003107967.1| chromosome partitioning protein ParB [Brucella microti CCM 4915]
gi|260169465|ref|ZP_05756276.1| chromosome partitioning protein ParB [Brucella sp. F5/99]
gi|260567472|ref|ZP_05837942.1| chromosome segregation DNA-binding protein [Brucella suis bv. 4
str. 40]
gi|261217877|ref|ZP_05932158.1| chromosome segregation DNA-binding protein [Brucella ceti M13/05/1]
gi|261314909|ref|ZP_05954106.1| chromosome segregation DNA-binding protein [Brucella pinnipedialis
M163/99/10]
gi|261316534|ref|ZP_05955731.1| chromosome segregation DNA-binding protein [Brucella pinnipedialis
B2/94]
gi|261321273|ref|ZP_05960470.1| chromosome segregation DNA-binding protein [Brucella ceti
M644/93/1]
gi|261323999|ref|ZP_05963196.1| chromosome segregation DNA-binding protein [Brucella neotomae 5K33]
gi|261755762|ref|ZP_05999471.1| chromosome segregation DNA-binding protein [Brucella suis bv. 3
str. 686]
gi|261758992|ref|ZP_06002701.1| chromosome segregation DNA-binding protein [Brucella sp. F5/99]
gi|265983053|ref|ZP_06095788.1| chromosome segregation DNA-binding protein [Brucella sp. 83/13]
gi|265987608|ref|ZP_06100165.1| chromosome segregation DNA-binding protein [Brucella pinnipedialis
M292/94/1]
gi|306839725|ref|ZP_07472527.1| ParB-like partition protein [Brucella sp. NF 2653]
gi|306842827|ref|ZP_07475467.1| ParB-like partition protein [Brucella sp. BO2]
gi|23348937|gb|AAN30948.1| chromosome partitioning protein ParB [Brucella suis 1330]
gi|148370152|gb|ABQ60131.1| chromosome partitioning protein ParB [Brucella ovis ATCC 25840]
gi|161336783|gb|ABX63088.1| parB-like partition protein [Brucella canis ATCC 23365]
gi|225618094|gb|EEH15137.1| ParB-like partition protein [Brucella ceti str. Cudo]
gi|256000619|gb|ACU49018.1| chromosome partitioning protein ParB [Brucella microti CCM 4915]
gi|260156990|gb|EEW92070.1| chromosome segregation DNA-binding protein [Brucella suis bv. 4
str. 40]
gi|260922966|gb|EEX89534.1| chromosome segregation DNA-binding protein [Brucella ceti M13/05/1]
gi|261293963|gb|EEX97459.1| chromosome segregation DNA-binding protein [Brucella ceti
M644/93/1]
gi|261295757|gb|EEX99253.1| chromosome segregation DNA-binding protein [Brucella pinnipedialis
B2/94]
gi|261299979|gb|EEY03476.1| chromosome segregation DNA-binding protein [Brucella neotomae 5K33]
gi|261303935|gb|EEY07432.1| chromosome segregation DNA-binding protein [Brucella pinnipedialis
M163/99/10]
gi|261738976|gb|EEY26972.1| chromosome segregation DNA-binding protein [Brucella sp. F5/99]
gi|261745515|gb|EEY33441.1| chromosome segregation DNA-binding protein [Brucella suis bv. 3
str. 686]
gi|264659805|gb|EEZ30066.1| chromosome segregation DNA-binding protein [Brucella pinnipedialis
M292/94/1]
gi|264661645|gb|EEZ31906.1| chromosome segregation DNA-binding protein [Brucella sp. 83/13]
gi|306287021|gb|EFM58532.1| ParB-like partition protein [Brucella sp. BO2]
gi|306405185|gb|EFM61462.1| ParB-like partition protein [Brucella sp. NF 2653]
Length = 293
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 136/297 (45%), Positives = 191/297 (64%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SK+RLGRGLAALIGE+ D P ++ + + I I + NP NPR F
Sbjct: 1 MNDDPSKKRLGRGLAALIGEI----DRPVEERKAPVPIERNIPIEFVTRNPRNPRRMFSE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LEDL QSIK HG++QP++VR +++IAGERR+RA++ A + +PVI+R+VD+
Sbjct: 57 TELEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWRASQRAGVDTIPVIVRDVDD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +LEIAI+ENVQR DLN +EEA+GY+QLI + YTQND+ ++GKSRSHVAN LR+LKL
Sbjct: 117 RVALEIAIIENVQRADLNSVEEAMGYQQLIDNHDYTQNDLAQVIGKSRSHVANTLRLLKL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ I +S GHAR+L++T +P +LA+ IV + +SVR E LVQ + + K
Sbjct: 177 PQRVQDFIVDGALSAGHARSLITTENPTALAERIVKEGLSVRQVEALVQAEARGGSEAKP 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
EK+ LEK +S G+ + I HR G I+Y + EQL IC L
Sbjct: 237 GKAAPAEKDADTKALEKLLSDVTGMKVEINHRERGGDVKIRYSSLEQLDEICRRLQS 293
>gi|254465251|ref|ZP_05078662.1| chromosome partitioning protein ParB [Rhodobacterales bacterium
Y4I]
gi|206686159|gb|EDZ46641.1| chromosome partitioning protein ParB [Rhodobacterales bacterium
Y4I]
Length = 297
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 120/298 (40%), Positives = 187/298 (62%), Gaps = 6/298 (2%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M++ +K R LGRGL+AL+ +VN + S + E ++ + I IV NP+ PR F
Sbjct: 1 MADKKTKPRGLGRGLSALMADVNPAPVSTQA--EAPRNAEVLVPIEKIVANPNQPRRQFL 58
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L+DL SIK G++QPLIVR G+Y+I+AGERR+RA++ A L EVPV+IR +
Sbjct: 59 KEDLDDLTASIKEKGVLQPLIVRPKAGGMYEIVAGERRWRASQAAQLHEVPVLIREYSDL 118
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+E+AI+EN+QR DLN +EEA Y+QL+ ++G+TQ + +GKSRSH+AN++R+L LP
Sbjct: 119 EMMEVAIIENIQRSDLNAMEEAQSYKQLMEKFGHTQEKMAEALGKSRSHIANLVRLLHLP 178
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE-QDNKKEKRKK 238
V+ ++++ ++S GHAR L+++ + LA+ IV +SVR TE LV++ + K
Sbjct: 179 EDVQILVQERKLSAGHARALITSDNASELARKIVKGGLSVRATEALVKKDAAGIRTAPAK 238
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
+ EK+ LE +S+ + + +SI H+ G I YE +QL +C++L
Sbjct: 239 KPKPEAEKDADTRALEGDLSAMLKMKVSIDHKPGGESGSVTISYENLDQLDELCNMLS 296
>gi|83950771|ref|ZP_00959504.1| chromosome partitioning protein parB [Roseovarius nubinhibens ISM]
gi|83838670|gb|EAP77966.1| chromosome partitioning protein parB [Roseovarius nubinhibens ISM]
Length = 305
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 120/300 (40%), Positives = 186/300 (62%), Gaps = 9/300 (3%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M++ K R LGRGL+AL+ +V + + ++ + ++I ++PNP PR F+
Sbjct: 1 MADKKGKQRGLGRGLSALMADVGDASTATAEQPRSPD---RMVAIDLVLPNPDQPRRRFD 57
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E LEDL SI GIIQPLIVR+ ++I+AGERR+RAA+ A + +VPV+I+ +
Sbjct: 58 EEKLEDLANSIAEKGIIQPLIVRSHPSKENHFEIVAGERRWRAAQRAKVHQVPVVIKEFN 117
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ LEIAI+EN+QR DLNP+EEA GY QL+ ++G+TQ+ + +GKSRSH+AN +R+L+
Sbjct: 118 DTEVLEIAIIENIQRADLNPVEEAAGYAQLMEKFGHTQDKLSQALGKSRSHIANTMRLLQ 177
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP +V+ + + ++S GHAR L+++ D LA+ ++SK +SVR TE LV+ E
Sbjct: 178 LPPAVQGFLSEGQLSAGHARALITSDDAEKLAKQVISKGLSVRQTEALVKSASKSAEGEA 237
Query: 238 KIFEGS-REKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLG 294
K K+ LE +S+ +G+ +SI H + G+ + Y +QL +CSLL
Sbjct: 238 KPAARKVSAKDADTRALEGDLSANLGMKVSIDHIGASGGGKITLTYSDLDQLDALCSLLS 297
>gi|331017736|gb|EGH97792.1| ParB family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 290
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 181/296 (61%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSSPTVS-SLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIKS G++QP++VR I N ++IIAGERR+RA++ A + +P ++R+V +++
Sbjct: 58 QALEELAQSIKSQGVMQPIVVRPIGNNRFEIIAGERRWRASQQAGVETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAMALQRLQHEFQLTQQQVADAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 AIKTMLSHGDLEMGHARALLGLGEDRQVEGARHVVARGLTVRQTEALVRQWLSGKPEAAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 238 PAKA----DPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 289
>gi|159185404|ref|NP_355754.2| chromosome partitioning protein [Agrobacterium tumefaciens str.
C58]
gi|159140652|gb|AAK88539.2| chromosome Partitioning Protein [Agrobacterium tumefaciens str.
C58]
Length = 293
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 153/295 (51%), Positives = 209/295 (70%), Gaps = 3/295 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS++ SKRRLGRGLAALIGE++Q + P + + + I I I + NPR +F+
Sbjct: 1 MSDDLSKRRLGRGLAALIGEMDQPV--PVGEPQRAVNADRTIPIEFIARSHRNPRRHFDE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L+DL SI+ HGI+QP++VR + Y+IIAGERR+RAA++A ++VPVI+R+VD+++
Sbjct: 59 NELQDLAASIRQHGIVQPVVVRTVGVNRYEIIAGERRWRAAQLAGFTDVPVIVRDVDDRT 118
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+AIVENVQR DLNPLEEA+GYEQLI+E+GYTQND+G I+GKSRSHVAN LR+LKLP
Sbjct: 119 ALELAIVENVQRSDLNPLEEAMGYEQLIAEHGYTQNDLGEIIGKSRSHVANSLRLLKLPD 178
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
VR+M+ +S GHAR LVSTSDP +LA+ IVSK +SVRD E L Q + + +
Sbjct: 179 PVRDMLADGSLSAGHARALVSTSDPATLARTIVSKGLSVRDAERLAQNDIKSQGEIAE-K 237
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ EK+ LE+ +S +GL++ I H+ GQ I Y T EQL+ +C LL +
Sbjct: 238 RPAGEKDSDTIALERSLSDALGLDVKISHKGGSGQIRIGYRTLEQLEAVCRLLEQ 292
>gi|104784442|ref|YP_610940.1| chromosomal partitioning protein ParB [Pseudomonas entomophila L48]
gi|95113429|emb|CAK18157.1| Chromosomal partitioning protein ParB [Pseudomonas entomophila L48]
Length = 290
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 101/296 (34%), Positives = 178/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ + S + + + + + I + PR +
Sbjct: 1 MA--IKKRGLGRGLDALLSGPSVSALEAQA-VKIDQKELQQLPVELIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI++HG++QP++VR I + Y+IIAGERR+RA + A L VP ++R V +++
Sbjct: 58 EALEELAHSIRTHGVMQPIVVRPIGDNRYEIIAGERRWRATQQAGLDTVPAMVREVPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNPLEEAL ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPLEEALALQRLQQEFELTQQQVADAVGKSRVTVANLLRLISLPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L + A+ +V++ ++VR TE LV++ N K + +
Sbjct: 178 AIKTMLAHGDLEMGHARALLGLEEDRQEEGARHVVARGLTVRQTEALVRQWLNGKPEPVE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
+ + + LE++++ ++G + I+H N KGQ I+Y + ++L+ + + +
Sbjct: 238 ASKP----DPDIARLEQRLAERLGSAVQIRHGNKGKGQLVIRYNSLDELQGVLAHI 289
>gi|86136760|ref|ZP_01055338.1| chromosome partitioning protein parB [Roseobacter sp. MED193]
gi|85826084|gb|EAQ46281.1| chromosome partitioning protein parB [Roseobacter sp. MED193]
Length = 301
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 121/301 (40%), Positives = 182/301 (60%), Gaps = 6/301 (1%)
Query: 1 MSNNYSKR--RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS + LGRGL+AL+ +VN S + +T ++ + I +V NP PR F
Sbjct: 1 MSEKAKNKPRGLGRGLSALMADVNPEPVSTSTEVQTPRNAEVLVPIEKVVANPDQPRRQF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L+DL SIK G++QPLIVR D +Y+I+AGERR+RAA+ A L EVPV+IR+ +
Sbjct: 61 LQEDLDDLTASIKEKGVLQPLIVRPRDGDMYEIVAGERRWRAAQAAQLHEVPVLIRDYSD 120
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+E+AI+EN+QR DLN +EEA Y+QL+ +G+TQ + +GKSRSH+AN++R+L L
Sbjct: 121 VEMMEVAIIENIQRSDLNAMEEAQSYKQLMERFGHTQEKMAEALGKSRSHIANLVRLLHL 180
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P VR ++ ++S GHAR L+++ + LAQ IV +SVR TE LV++ +
Sbjct: 181 PEDVRALVNDRKLSAGHARALITSDNASELAQKIVKGGLSVRATEALVKKDAAGLQAPAA 240
Query: 239 IFEGSR--EKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
R +K+ LE +S+ + + +SI H+ G I YET +QL +C++L
Sbjct: 241 ARRSPRPTDKDADTKALEGDLSAILRMKVSIDHKTGGESGSVTISYETLDQLDELCNILS 300
Query: 295 E 295
+
Sbjct: 301 K 301
>gi|163757461|ref|ZP_02164550.1| putative chromosome partitioning protein [Hoeflea phototrophica
DFL-43]
gi|162284963|gb|EDQ35245.1| putative chromosome partitioning protein [Hoeflea phototrophica
DFL-43]
Length = 298
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 151/300 (50%), Positives = 202/300 (67%), Gaps = 7/300 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + SK+RLGRGLAALIGE++Q + K + + + I + NP NPR F
Sbjct: 1 MAEDVSKKRLGRGLAALIGEIDQPVSPQAKPSVSAD---RMVPIEHVTRNPRNPRRNFAP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LEDL +SI+ HG++QP++VR G Y+IIAGERR+RA++MA L E+PVI+R+VD+K+
Sbjct: 58 SDLEDLSRSIRQHGVVQPVVVRTAAEGRYEIIAGERRWRASQMAGLVEIPVIVRDVDDKT 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVENVQR DLNPLEEA GYEQLI++YGYTQND+G ++GKSRSHVAN LR+LKLP
Sbjct: 118 ALEIAIVENVQRADLNPLEEAQGYEQLIAQYGYTQNDLGEVIGKSRSHVANSLRLLKLPE 177
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQ----EQDNKKEKR 236
VR M+ +S GHAR +VSTS+P +LA++IV +SVRD E + Q E
Sbjct: 178 DVRTMLSDGVLSAGHARAIVSTSNPAALAKLIVDGGLSVRDAERMAQKDSEEAAQTGGLE 237
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
K K+ LEK ++ +GL + + H+ GQ I Y+T EQL +C LLG+N
Sbjct: 238 TKSARQPDNKDADTVALEKSLTDVLGLKVQLAHKGQGGQLRIDYKTLEQLDELCRLLGDN 297
>gi|56461727|ref|YP_157008.1| chromosome partitioning protein ParB [Idiomarina loihiensis L2TR]
gi|56180737|gb|AAV83459.1| Chromosome partitioning protein ParB [Idiomarina loihiensis L2TR]
Length = 291
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 109/298 (36%), Positives = 170/298 (57%), Gaps = 11/298 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKK-TETIPESQDCISIHSIVPNPHNPRNYFE 59
MS KR LGRGL AL+ Q+ D ++ TE + + + + P + PR
Sbjct: 1 MS--AKKRGLGRGLDALLTSNQQNSDRQSEQVTEEVKGELQKLPVEFLKPGRYQPRKDMS 58
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E LEDL S+K+ GIIQP++VR + Y+IIAGERR+RAA++A L VP +I++V ++
Sbjct: 59 PEALEDLAASVKAQGIIQPIVVRPVGKDEYEIIAGERRWRAAQLAKLELVPCLIKDVPDE 118
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+++ IA++EN+QR+DLN +EEA ++L+ E+ T D+ VGKSR+ V N+LR+ L
Sbjct: 119 AAVAIALIENIQREDLNAMEEATALQRLLVEFQMTHQDVAQAVGKSRTTVTNLLRLNNLQ 178
Query: 180 SSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ ++ + +I LGHA+ L + +AQ IV+K M+VRD E+LV+
Sbjct: 179 DGVKVLLERGDIELGHAKLLLALEGEQQADVAQQIVAKDMTVRDAEKLVRR-----TIDP 233
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
E + + LE K+S +G +SI H KG+ I Y ++L I + +
Sbjct: 234 PKETEKPEPDANIEHLETKLSETLGAKVSINHGRKGKGKLVISYTNLDELDGILTHIK 291
>gi|83942031|ref|ZP_00954493.1| chromosome partitioning protein parB [Sulfitobacter sp. EE-36]
gi|83847851|gb|EAP85726.1| chromosome partitioning protein parB [Sulfitobacter sp. EE-36]
Length = 295
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 118/300 (39%), Positives = 188/300 (62%), Gaps = 9/300 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ +R LGRGL+AL+ +V ++ + + I I PNP PR F+
Sbjct: 1 MADKDKRRGLGRGLSALMADVAETQTVASEGAAE-----QYVPIEKISPNPEQPRKRFDP 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L+DL SI+ G+IQPLIVR D+G ++I+AGERR+RA++MA L E+P+I+R +
Sbjct: 56 QDLDDLANSIREKGVIQPLIVRRRDDGTFEIVAGERRWRASQMAQLHELPIIVREFTDVE 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+AI+EN+QR DLN +EEA GY QL+ +G+TQ + +GKSRSH+AN+LR+L LP
Sbjct: 116 VLEVAIIENIQRADLNSIEEAAGYRQLMDRFGHTQEKMAEALGKSRSHIANLLRLLNLPE 175
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+V EM+R+ +++ GHARTLV + +P LA+ I++ +SVR E L++++ + +
Sbjct: 176 NVLEMVRQGDLTAGHARTLVPSKNPEKLAKQIIAGGLSVRAAEALIKKEQQAENEGPNKR 235
Query: 241 --EGSREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLLGEN 296
+ S EK+ LE +S +GL +++ H+ + GQ + Y T ++L +C L +
Sbjct: 236 AAKSSNEKDADTRALEGDLSENLGLKVTLNHKPGQEAGQMVLHYTTMDELDELCQRLSAS 295
>gi|170724364|ref|YP_001752052.1| parB-like partition protein [Pseudomonas putida W619]
gi|169762367|gb|ACA75683.1| parB-like partition protein [Pseudomonas putida W619]
Length = 290
Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 102/296 (34%), Positives = 178/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ + S E+ + + + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSGPSVS-ALEEQAVKIDQKELQHLPVELIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI++HG++QP++VR ID Y+IIAGERR+RA + A L VP ++R V +++
Sbjct: 58 QALEELAHSIRTHGVMQPIVVRPIDGNRYEIIAGERRWRATQQAGLDTVPAMVREVPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNPLEEAL ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPLEEALALQRLQQEFELTQQQVADAVGKSRVTVANLLRLISLPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L + A+ +V++ ++VR TE LV++ N K +
Sbjct: 178 AIKTMLAHGDLEMGHARALLGLEEDRQEEGARHVVARGLTVRQTEALVRQWLNGKPDPVE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
+ + + LE++++ ++G + I+H N KGQ I+Y + ++L+ + + +
Sbjct: 238 PNKP----DPDIERLEQRLAERLGSPVQIRHGNKGKGQLVIRYNSLDELQGVLAHI 289
>gi|17986294|ref|NP_538928.1| chromosome partitioning protein PARB [Brucella melitensis bv. 1
str. 16M]
gi|260562962|ref|ZP_05833448.1| chromosome segregation DNA-binding protein [Brucella melitensis bv.
1 str. 16M]
gi|17981876|gb|AAL51192.1| chromosome partitioning protein parb [Brucella melitensis bv. 1
str. 16M]
gi|260152978|gb|EEW88070.1| chromosome segregation DNA-binding protein [Brucella melitensis bv.
1 str. 16M]
Length = 293
Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 135/297 (45%), Positives = 189/297 (63%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SK+RLGRGLAALIGE+ D P ++ + + I I + NP NPR F
Sbjct: 1 MNDDPSKKRLGRGLAALIGEI----DRPVEERKAPVPIERNIPIEFVTRNPRNPRRMFSE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LEDL QSIK HG++QP++VR +++IAGERR+ A++ A + +PVI+R+VD+
Sbjct: 57 TELEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWLASQRAGVDTIPVIVRDVDD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +LEIAI+ENVQR DLN +EEA+GY+QLI + YTQND+ ++GKSRSHVAN LR+LKL
Sbjct: 117 RVALEIAIIENVQRADLNSVEEAMGYQQLIDNHDYTQNDLAQVIGKSRSHVANTLRLLKL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ I +S GHAR+L++T +P +LA+ IV + +SVR E LVQ + + K
Sbjct: 177 PQRVQDFIVDGALSAGHARSLITTENPTALAERIVKEGLSVRQVEALVQAEARGGSEAKP 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
EK+ LEK +S G+ + I HR G I Y + EQL IC L
Sbjct: 237 GKAAPAEKDADTKALEKLLSDVTGMKVEINHRERGGDVKIHYSSLEQLDEICRRLQS 293
>gi|306843474|ref|ZP_07476075.1| ParB-like partition protein [Brucella sp. BO1]
gi|306276165|gb|EFM57865.1| ParB-like partition protein [Brucella sp. BO1]
Length = 293
Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 136/297 (45%), Positives = 191/297 (64%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SK+RLGRGLAALIGE+ D P ++ + + I I + NP NPR F
Sbjct: 1 MNDDPSKKRLGRGLAALIGEI----DRPVEERKAPVPIERNIPIEFVTRNPRNPRRMFSE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LEDL QSIK HG++QP++VR +++IAGERR+RA++ A + +PVI+R+VD+
Sbjct: 57 AELEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWRASQRAGVDTIPVIVRDVDD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +LEIAI+ENVQR DLN +EEA+GY+QLI + YTQND+ ++GKSRSHVAN LR+LKL
Sbjct: 117 RVALEIAIIENVQRADLNSVEEAMGYQQLIDNHDYTQNDLAQVIGKSRSHVANTLRLLKL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ I +S GHAR+L++T +P +LA+ IV + +SVR E LVQ + + K
Sbjct: 177 PQRVQDFIVDGALSAGHARSLITTENPTALAERIVKEGLSVRQVEALVQAEARGGSEAKL 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
EK+ LEK +S G+ + I HR G I+Y + EQL IC L
Sbjct: 237 GKAAPAEKDADTKALEKLLSDVTGMKVEINHRERGGDVKIRYSSLEQLDEICRRLQS 293
>gi|153008198|ref|YP_001369413.1| parB-like partition protein [Ochrobactrum anthropi ATCC 49188]
gi|151560086|gb|ABS13584.1| parB-like partition protein [Ochrobactrum anthropi ATCC 49188]
Length = 293
Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 135/297 (45%), Positives = 191/297 (64%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SK+RLGRGLAALIGE+ D P ++ + + + I + NP NPR F
Sbjct: 1 MNDDPSKKRLGRGLAALIGEI----DRPAEERKAPVPIERNVPIEFVTRNPRNPRRMFSE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LEDL QSIK HG++QP++VR +++IAGERR+RA++ A + +PVI+R+VD+
Sbjct: 57 GDLEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWRASQRAGVDTIPVIVRDVDD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +LEIAI+ENVQR DLN +EEALGY+QLI + YTQND+ ++GKSRSHVAN LR+LKL
Sbjct: 117 RVALEIAIIENVQRADLNAVEEALGYQQLIDNHDYTQNDLAQVIGKSRSHVANTLRLLKL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ I +S GHAR+L++ +P +LA+ IV +SVR E L Q + + K
Sbjct: 177 PQPVQDFIVDGALSAGHARSLITMENPTALAERIVKDGLSVRQVEALAQAEARGGAEAKP 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
G EK+ LEK +S G+ + I HR+ G+ I+Y + EQL IC L
Sbjct: 237 GKAGPVEKDADTKALEKLLSDVTGMKVEINHRDRGGEVKIRYSSLEQLDEICRRLQS 293
>gi|256158556|ref|ZP_05456446.1| parB-like partition protein [Brucella ceti M490/95/1]
gi|256253965|ref|ZP_05459501.1| parB-like partition protein [Brucella ceti B1/94]
gi|261221107|ref|ZP_05935388.1| chromosome segregation DNA-binding protein [Brucella ceti B1/94]
gi|265997068|ref|ZP_06109625.1| chromosome segregation DNA-binding protein [Brucella ceti
M490/95/1]
gi|260919691|gb|EEX86344.1| chromosome segregation DNA-binding protein [Brucella ceti B1/94]
gi|262551536|gb|EEZ07526.1| chromosome segregation DNA-binding protein [Brucella ceti
M490/95/1]
Length = 293
Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 136/297 (45%), Positives = 191/297 (64%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SK+RLGRGLAALIGE+ D P ++ + + I I + NP NPR F
Sbjct: 1 MNDDPSKKRLGRGLAALIGEI----DRPVEERKAPVPIERNIPIEFVTRNPCNPRRMFSE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LEDL QSIK HG++QP++VR +++IAGERR+RA++ A + +PVI+R+VD+
Sbjct: 57 TELEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWRASQRAGVDTIPVIVRDVDD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +LEIAI+ENVQR DLN +EEA+GY+QLI + YTQND+ ++GKSRSHVAN LR+LKL
Sbjct: 117 RVALEIAIIENVQRADLNSVEEAMGYQQLIDNHDYTQNDLAQVIGKSRSHVANTLRLLKL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ I +S GHAR+L++T +P +LA+ IV + +SVR E LVQ + + K
Sbjct: 177 PQRVQDFIVDGALSAGHARSLITTENPTALAERIVKEGLSVRQVEALVQAEARGGSEAKP 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
EK+ LEK +S G+ + I HR G I+Y + EQL IC L
Sbjct: 237 GKAAPAEKDADTKALEKLLSDVTGMKVEINHRERGGDVKIRYSSLEQLDEICRRLQS 293
>gi|167036425|ref|YP_001671656.1| parB-like partition protein [Pseudomonas putida GB-1]
gi|166862913|gb|ABZ01321.1| parB-like partition protein [Pseudomonas putida GB-1]
Length = 290
Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 101/296 (34%), Positives = 179/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ + S E+ + + + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSGPSVS-ALEEQAVKIDQKELQHLPVELIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI++HG++QP++VR I + Y+IIAGERR+RA + A L +P ++R V +++
Sbjct: 58 EALEELAHSIRTHGVMQPIVVRPIGDNRYEIIAGERRWRATQQAGLDTIPAMVREVPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNPLEEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPLEEAMALQRLQQEFELTQQQVADAVGKSRVTVANLLRLITLPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L + S A+ +V++ ++VR TE LV++ + K +
Sbjct: 178 AIKTMLAHGDLEMGHARALLGLDESRQEEGARHVVARGLTVRQTEALVRQWLSDKPDPVE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
+ + + LE++++ ++G + I+H N KGQ I+Y + ++L+ + S +
Sbjct: 238 QSKP----DPDIARLEQRLAERLGSAVQIRHGNKGKGQLVIRYNSLDELQGVLSHI 289
>gi|226947201|ref|YP_002802274.1| chromosome partition ParB [Azotobacter vinelandii DJ]
gi|226722128|gb|ACO81299.1| chromosome partition ParB [Azotobacter vinelandii DJ]
Length = 294
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 100/299 (33%), Positives = 181/299 (60%), Gaps = 12/299 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETI---PESQDCISIHSIVPNPHNPRNY 57
M+ KR LGRGL AL+G + + +K+ E + + SI + PR
Sbjct: 1 MA--IKKRGLGRGLDALLGGTGGGVATLQKEIEQQQVDGHELQHLPLESIQRGKYQPRRD 58
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ LE+L QSI++ G++QP++VR +D Y+IIAGERR+RA++ A L ++P I+R+V
Sbjct: 59 MDPVALEELAQSIQAQGVMQPIVVRPLDGQRYEIIAGERRWRASQQAGLKKIPAIVRDVP 118
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+++++ +A++EN+QR++LNPLEEAL ++L E+ TQ + VGKSR V+N+LR++
Sbjct: 119 DEAAIAMALIENIQRENLNPLEEALALQRLQQEFQLTQQQVADAVGKSRVSVSNLLRLIS 178
Query: 178 LPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
LP ++ ++ ++ +GHAR L + + A+ +V+ ++VR TE LV++ N
Sbjct: 179 LPEEIKTLLAHGDLEMGHARALLGLPAERQVEGARHVVAHGLTVRQTEALVRQWLN---- 234
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ E + + +T LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 235 EQPQAEKTPTVDPDITRLEQRLAERLGSPVQIRHSQKGKGQLVIRYNSLDELQGVLAHI 293
>gi|239833099|ref|ZP_04681428.1| ParB-like partition protein [Ochrobactrum intermedium LMG 3301]
gi|239825366|gb|EEQ96934.1| ParB-like partition protein [Ochrobactrum intermedium LMG 3301]
Length = 322
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 133/297 (44%), Positives = 192/297 (64%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SK+RLGRGLAALIGE+ D P ++ + + + I + NP NPR F
Sbjct: 30 MNDDPSKKRLGRGLAALIGEI----DRPVEERKAPVPIERNVPIEFVTRNPRNPRRMFSE 85
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LEDL QSIK HG++QP++VR +++IAGERR+RA++ A + +PVI+R+VD+
Sbjct: 86 GELEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWRASQRAGVDTIPVIVRDVDD 145
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +LEIAI+ENVQR DLN +EEALGY+QLI + YTQND+ ++GKSRSHVAN LR+LKL
Sbjct: 146 RVALEIAIIENVQRADLNAVEEALGYQQLIDNHDYTQNDLAQVIGKSRSHVANTLRLLKL 205
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ I +S GHAR+L++ +P ++A+ IV +SVR E L Q + + +
Sbjct: 206 PQPVQDFIVDGALSAGHARSLITMENPTAMAERIVKDGLSVRQVEALAQAEARGEANARS 265
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ G EK+ LEK +S G+ + I HR+ G+ I+Y + EQL IC L
Sbjct: 266 VKPGPVEKDADTKALEKLLSDVTGMKVEINHRDRGGEVKIRYSSLEQLDEICRRLQS 322
>gi|311696578|gb|ADP99451.1| ParB family protein [marine bacterium HP15]
Length = 295
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 97/300 (32%), Positives = 168/300 (56%), Gaps = 11/300 (3%)
Query: 1 MSNNY--SKRRLG-RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
M++ KR LG RGL AL+ ++D K + + I I + PR
Sbjct: 1 MTDTMAAKKRGLGERGLGALLAGSKVNLDQELKDHD---GELREVPIDLIQRGRYQPRRD 57
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ L++L SI+ G++QP++VR I G Y++IAGERR+RA +MA L +P IIR+V
Sbjct: 58 MDPAALQELADSIRQQGVMQPVVVRPIAEGRYELIAGERRWRATQMAGLDSIPAIIRDVP 117
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+++++ +A++EN+QR++LNP+EEA ++L E+G TQ + VGKSR+ + N+LR++
Sbjct: 118 DEAAIAMALIENIQRENLNPIEEAFALQRLQDEFGLTQAQVAEAVGKSRTTITNLLRLIG 177
Query: 178 LPSSVREMIRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L VR M+ ++ +GH R +++ + +A+ +V+K +SVR TE LV+ E
Sbjct: 178 LSEDVRIMLEHGDLEMGHGRAMLTLAPELQMQVAKQVVAKSLSVRQTEALVRRVQQ--ET 235
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ + L+ ++ ++G +SI H KG+ I+Y + ++L I +
Sbjct: 236 PDSKSRKKGVVDPNIRALQDDLAERLGARVSIDHGQRGKGKLVIEYSSLDELDGILGHIK 295
>gi|84514914|ref|ZP_01002277.1| chromosome partitioning protein parB [Loktanella vestfoldensis
SKA53]
gi|84511073|gb|EAQ07527.1| chromosome partitioning protein parB [Loktanella vestfoldensis
SKA53]
Length = 295
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 113/301 (37%), Positives = 178/301 (59%), Gaps = 11/301 (3%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + R LGRGL+AL+ +V Q PE T + P + + I PNP PR F
Sbjct: 1 MARSTKNPRGLGRGLSALMSDVGQ----PEASTTSPPRPDMIVPVERIRPNPDQPRRTFA 56
Query: 60 SEGLEDLCQSIKSHGIIQPLIVR--AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ L +L SI GIIQPLIVR D Y+I+AGERR+RAA++A L ++PV++R+
Sbjct: 57 EDALRELAASIAEKGIIQPLIVRLSPQDPDSYEIVAGERRWRAAQIAKLHDIPVLVRDYT 116
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ LE+AI+EN+QR DLN ++EA Y QL+ ++G+TQ+ + + +GKSRSH+AN+LR+L
Sbjct: 117 DTEVLEVAIIENIQRADLNAVDEAASYRQLMDKFGHTQDQMATALGKSRSHIANLLRLLS 176
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP V+ + ++ GHARTLV + LA+ + +K+SVR+ E L + KR+
Sbjct: 177 LPEEVQGYLVSGALTAGHARTLVGHPQAVMLAREYIQRKLSVREAENLA--KKGPALKRR 234
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLGE 295
+ K+ +E ++S+ + + ++I H+ G+ I Y++ +QL + L
Sbjct: 235 SVTGAPVPKDPDTIQIENELSATLRMKVTIDHKAGDEGGKISISYKSLDQLDDLLRALAG 294
Query: 296 N 296
N
Sbjct: 295 N 295
>gi|330505864|ref|YP_004382733.1| chromosome segregation DNA-binding protein [Pseudomonas mendocina
NK-01]
gi|328920150|gb|AEB60981.1| chromosome segregation DNA-binding protein [Pseudomonas mendocina
NK-01]
Length = 289
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 91/296 (30%), Positives = 176/296 (59%), Gaps = 11/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+G N E+ + + + I + PR +
Sbjct: 1 MA--AKKRGLGRGLDALLGG-NTVSALQEEAAQVDTRELQYVPLELIQRGKYQPRRDMDQ 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L SI++ G++QP+++R I NG ++I+AGERR+RA+++A ++P ++R + +++
Sbjct: 58 TALEELAASIRAQGVMQPIVLRPIGNGCFEIVAGERRWRASQLAGQDKIPAMVRELPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR + N+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAVALQRLQQEFELTQQQVADAVGKSRVTITNLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ ++ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K
Sbjct: 178 EIKTLLAHGDLEMGHARALLGLPLEQQVEAARHVVARGLTVRQTEALVRQWLS-----AK 232
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + IKH KGQ I+Y + ++L+ + + +
Sbjct: 233 PAPVKAKADPDISRLEQRLAERLGSPVQIKHGAKGKGQLVIRYNSLDELQGVLAHI 288
>gi|62290902|ref|YP_222695.1| chromosome partitioning protein ParB [Brucella abortus bv. 1 str.
9-941]
gi|82700813|ref|YP_415387.1| ParB-like nuclease:ParB-like partition protein [Brucella melitensis
biovar Abortus 2308]
gi|189025115|ref|YP_001935883.1| ParB-like nuclease [Brucella abortus S19]
gi|225853489|ref|YP_002733722.1| ParB-like partition protein [Brucella melitensis ATCC 23457]
gi|237816408|ref|ZP_04595401.1| ParB-like partition protein [Brucella abortus str. 2308 A]
gi|254690190|ref|ZP_05153444.1| parB-like partition protein [Brucella abortus bv. 6 str. 870]
gi|254694680|ref|ZP_05156508.1| parB-like partition protein [Brucella abortus bv. 3 str. Tulya]
gi|254731223|ref|ZP_05189801.1| parB-like partition protein [Brucella abortus bv. 4 str. 292]
gi|256045660|ref|ZP_05448538.1| parB-like partition protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256112382|ref|ZP_05453303.1| parB-like partition protein [Brucella melitensis bv. 3 str. Ether]
gi|256258444|ref|ZP_05463980.1| parB-like partition protein [Brucella abortus bv. 9 str. C68]
gi|256263031|ref|ZP_05465563.1| chromosome segregation DNA-binding protein [Brucella melitensis bv.
2 str. 63/9]
gi|260546163|ref|ZP_05821903.1| chromosome segregation DNA-binding protein [Brucella abortus NCTC
8038]
gi|260755731|ref|ZP_05868079.1| chromosome segregation DNA-binding protein [Brucella abortus bv. 6
str. 870]
gi|260758955|ref|ZP_05871303.1| chromosome segregation DNA-binding protein [Brucella abortus bv. 4
str. 292]
gi|260884757|ref|ZP_05896371.1| chromosome segregation DNA-binding protein [Brucella abortus bv. 9
str. C68]
gi|261215008|ref|ZP_05929289.1| chromosome segregation DNA-binding protein [Brucella abortus bv. 3
str. Tulya]
gi|265992082|ref|ZP_06104639.1| chromosome segregation DNA-binding protein [Brucella melitensis bv.
1 str. Rev.1]
gi|265993817|ref|ZP_06106374.1| chromosome segregation DNA-binding protein [Brucella melitensis bv.
3 str. Ether]
gi|297247286|ref|ZP_06931004.1| ParB family chromosome partitioning protein [Brucella abortus bv. 5
str. B3196]
gi|62197034|gb|AAX75334.1| ParB, chromosome partitioning protein ParB [Brucella abortus bv. 1
str. 9-941]
gi|82616914|emb|CAJ12015.1| ParB-like nuclease:ParB-like partition protein [Brucella melitensis
biovar Abortus 2308]
gi|189020687|gb|ACD73409.1| ParB-like nuclease [Brucella abortus S19]
gi|225641854|gb|ACO01768.1| parB-like partition protein [Brucella melitensis ATCC 23457]
gi|237788475|gb|EEP62690.1| ParB-like partition protein [Brucella abortus str. 2308 A]
gi|260096270|gb|EEW80146.1| chromosome segregation DNA-binding protein [Brucella abortus NCTC
8038]
gi|260669273|gb|EEX56213.1| chromosome segregation DNA-binding protein [Brucella abortus bv. 4
str. 292]
gi|260675839|gb|EEX62660.1| chromosome segregation DNA-binding protein [Brucella abortus bv. 6
str. 870]
gi|260874285|gb|EEX81354.1| chromosome segregation DNA-binding protein [Brucella abortus bv. 9
str. C68]
gi|260916615|gb|EEX83476.1| chromosome segregation DNA-binding protein [Brucella abortus bv. 3
str. Tulya]
gi|262764798|gb|EEZ10719.1| chromosome segregation DNA-binding protein [Brucella melitensis bv.
3 str. Ether]
gi|263003148|gb|EEZ15441.1| chromosome segregation DNA-binding protein [Brucella melitensis bv.
1 str. Rev.1]
gi|263092904|gb|EEZ17079.1| chromosome segregation DNA-binding protein [Brucella melitensis bv.
2 str. 63/9]
gi|297174455|gb|EFH33802.1| ParB family chromosome partitioning protein [Brucella abortus bv. 5
str. B3196]
gi|326410053|gb|ADZ67118.1| ParB-like nuclease [Brucella melitensis M28]
gi|326539770|gb|ADZ87985.1| parB-like partition protein [Brucella melitensis M5-90]
Length = 293
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 135/297 (45%), Positives = 190/297 (63%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SK+RLGRGLAALIGE+ D P ++ + + I I + NP NPR F
Sbjct: 1 MNDDPSKKRLGRGLAALIGEI----DRPVEERKAPVPIERNIPIEFVTRNPRNPRRMFSE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LEDL QSIK HG++QP++VR +++IAGERR+ A++ A + +PVI+R+VD+
Sbjct: 57 TELEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWLASQRAGVDTIPVIVRDVDD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +LEIAI+ENVQR DLN +EEA+GY+QLI + YTQND+ ++GKSRSHVAN LR+LKL
Sbjct: 117 RVALEIAIIENVQRADLNSVEEAMGYQQLIDNHDYTQNDLAQVIGKSRSHVANTLRLLKL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ I +S GHAR+L++T +P +LA+ IV + +SVR E LVQ + + K
Sbjct: 177 PQRVQDFIVDGALSAGHARSLITTENPTALAERIVKEGLSVRQVEALVQAEARGGSEAKP 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
EK+ LEK +S G+ + I HR G I+Y + EQL IC L
Sbjct: 237 GKAAPAEKDADTKALEKLLSDVTGMKVEINHRERGGDVKIRYSSLEQLDEICRRLQS 293
>gi|28872706|ref|NP_795325.1| ParB family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213968451|ref|ZP_03396594.1| ParB family protein [Pseudomonas syringae pv. tomato T1]
gi|301384262|ref|ZP_07232680.1| ParB family protein [Pseudomonas syringae pv. tomato Max13]
gi|302063887|ref|ZP_07255428.1| ParB family protein [Pseudomonas syringae pv. tomato K40]
gi|302131971|ref|ZP_07257961.1| ParB family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28855962|gb|AAO59020.1| ParB family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213926739|gb|EEB60291.1| ParB family protein [Pseudomonas syringae pv. tomato T1]
gi|330964190|gb|EGH64450.1| ParB family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 290
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 181/296 (61%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSSPTVS-SLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIKS G++QP++VR I N ++IIAGERR+RA++ A + +P ++R+V +++
Sbjct: 58 QALEELAQSIKSQGVMQPIVVRPIGNNRFEIIAGERRWRASQQAGVETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 AIKTMLSHGDLEMGHARALLGLGEDRQVEGARHVVARGLTVRQTEALVRQWLSGKPEAAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 238 PAKA----DPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 289
>gi|94496559|ref|ZP_01303135.1| chromosome partitioning protein [Sphingomonas sp. SKA58]
gi|94423919|gb|EAT08944.1| chromosome partitioning protein [Sphingomonas sp. SKA58]
Length = 305
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 118/302 (39%), Positives = 183/302 (60%), Gaps = 9/302 (2%)
Query: 1 MSNNYS--KR--RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRN 56
M+ KR LGRGL+AL+G+V + + ++ I + I P+P PR
Sbjct: 1 MTEKPKTAKRPQGLGRGLSALLGDVAREEPVSPSAPQVNGKAVQSIEVALIHPHPEQPRR 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+F+ L++L SI G+IQP+IVR G ++IIAGERR+RA++ A L +P I+R+
Sbjct: 61 HFDDGALQELADSIAKRGVIQPIIVRPHGGG-FQIIAGERRWRASQRAQLHRIPAIVRDF 119
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D + +LEIA++EN+QR+DLNP+EEA Y +LI+E+ ++Q +G IVGKSRSHVAN++R+L
Sbjct: 120 DEQETLEIALIENIQREDLNPIEEAEAYRKLIAEFNHSQEALGRIVGKSRSHVANLMRLL 179
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD--NKKE 234
LP SV++ + +IS+GHAR L+ D LA I K +SVRDTE+LV+ N
Sbjct: 180 DLPQSVQQQVMHSKISMGHARALIGAPDCERLAGQIEEKGLSVRDTEQLVRRAKTGNDAP 239
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN--NKGQFCIKYETNEQLKIICSL 292
+ + ++K+ + LE+ ++ +GL + I H G ++Y +QL ++C
Sbjct: 240 AARSMRSDPKDKDPDIAALEQHLADILGLKVEIAHSGAATGGTLSMRYSNLDQLDMLCQR 299
Query: 293 LG 294
L
Sbjct: 300 LS 301
>gi|71734810|ref|YP_277288.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289628223|ref|ZP_06461177.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289649113|ref|ZP_06480456.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298489529|ref|ZP_07007538.1| chromosome (plasmid) partitioning protein ParB [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|71555363|gb|AAZ34574.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298155956|gb|EFH97067.1| chromosome (plasmid) partitioning protein ParB [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320321678|gb|EFW77777.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331119|gb|EFW87090.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330870066|gb|EGH04775.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330881917|gb|EGH16066.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330890259|gb|EGH22920.1| chromosome partitioning protein ParB [Pseudomonas syringae pv. mori
str. 301020]
Length = 290
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 182/296 (61%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSSPTVS-SLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIKS G++QP+++R I + ++IIAGERR+RA++ A + +P ++R+V +++
Sbjct: 58 QALEELAQSIKSQGVMQPIVIRPIGDNRFEIIAGERRWRASQQAGVETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L +S + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 AIKTMLSHGDLEMGHARALLGLSEDRQVEGARHVVARGLTVRQTEALVRQWLSGKPEAAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 238 PVKA----DPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 289
>gi|330987010|gb|EGH85113.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 290
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 181/296 (61%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLS-SPTVTSLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIKS G++QP+++R I + ++IIAGERR+RA++ A + +P ++R+V +++
Sbjct: 58 QALEELAQSIKSQGVMQPIVIRPIGDNRFEIIAGERRWRASQQAGVETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L +S + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 AIKTMLSHGDLEMGHARALLGLSEDRQVEGARHVVARGLTVRQTEALVRQWLSGKPEAAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 238 PVKA----DPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 289
>gi|120556787|ref|YP_961138.1| parB-like partition protein [Marinobacter aquaeolei VT8]
gi|120326636|gb|ABM20951.1| chromosome segregation DNA-binding protein [Marinobacter aquaeolei
VT8]
Length = 295
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 93/299 (31%), Positives = 168/299 (56%), Gaps = 11/299 (3%)
Query: 1 MSNNY--SKRRLG-RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
M+ KR LG RGL AL+ +++ + I + I + PR
Sbjct: 1 MTTTMAAKKRGLGERGLGALLQGSKVNLNQEISDHD---GELREIPVDLIQRGRYQPRRD 57
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ L++L SI+ G++QP++VR + G Y++IAGERR+RA ++A L +P IIR+V
Sbjct: 58 MDPAALQELADSIRQQGVMQPVVVRPVSEGRYELIAGERRWRATQLAELDRIPAIIRDVP 117
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+++++ +A++EN+QR++LNP+EEA ++L E+G TQ + VGKSR+ + N+LR++
Sbjct: 118 DEAAIAMALIENIQRENLNPIEEAFALQRLQDEFGLTQAQVAEAVGKSRTTITNLLRLIG 177
Query: 178 LPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L VR M+ ++ +GH R + + + +A+ +V+K +SVR TE LV+ +K +
Sbjct: 178 LTEDVRVMLEHGDLEMGHGRAMLTLPPEQQMQVARQVVAKSLSVRQTEALVRRVQQEKPE 237
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + L+ +S ++G ++I H + KG+ I+Y + ++L I +
Sbjct: 238 D--KASAKPALDPNIRALQDDLSDRLGARVAINHGKRGKGKLVIEYSSLDELDGILGHI 294
>gi|330876344|gb|EGH10493.1| ParB family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 290
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 181/296 (61%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSSPTVS-SLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIKS G++QP++VR I N ++IIAGERR+RA++ A + +P ++R+V +++
Sbjct: 58 QALEELAQSIKSQGVMQPIVVRPIGNDRFEIIAGERRWRASQQAGVETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 AIKTMLSHGDLEMGHARALLGLGEDRQVEGARHVVARGLTVRQTEALVRQWLSGKPEAAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 238 PAKA----DPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 289
>gi|237801673|ref|ZP_04590134.1| ParB family protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024532|gb|EGI04588.1| ParB family protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 290
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 180/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSSPTVS-SLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIKS G++QP++VR I + ++IIAGERR+RA++ A + +P ++R+V +++
Sbjct: 58 QALEELAQSIKSQGVMQPIVVRPIGDNRFEIIAGERRWRASQQAGVGTIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ M+ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 VIKTMLSHGDLEMGHARALLGLGEDRQVEGARHVVARGLTVRQTEALVRQWLSGKPEAAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 238 PAKT----DPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 289
>gi|146309628|ref|YP_001190093.1| chromosome segregation DNA-binding protein [Pseudomonas mendocina
ymp]
gi|145577829|gb|ABP87361.1| chromosome segregation DNA-binding protein [Pseudomonas mendocina
ymp]
Length = 289
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 91/296 (30%), Positives = 175/296 (59%), Gaps = 11/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+G N E+ + + + I + PR +
Sbjct: 1 MA--AKKRGLGRGLDALLGG-NTVSALQEEAAQVDTRELQYVPLDLIQRGKYQPRRDMDQ 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L SI++ G++QP+++R I G ++I+AGERR+RA+++A ++P ++R + +++
Sbjct: 58 TALEELAASIRAQGVMQPIVLRPIGGGRFEIVAGERRWRASQLAGQDKIPAMVRELPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR + N+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAVALQRLQQEFELTQQQVADAVGKSRVTITNLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ ++ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K
Sbjct: 178 EIKTLLAHGDLEMGHARALLGLPLEQQIEAARHVVARGLTVRQTEALVRQWLS-----AK 232
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE+K++ ++G + IKH KGQ I+Y + ++L+ + + +
Sbjct: 233 PEPAKAKADPDISRLEQKLAERLGSPVQIKHGSKGKGQLVIRYNSLDELQGVLAHI 288
>gi|257485608|ref|ZP_05639649.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 290
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 180/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLS-SPTVTSLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK G++QP+++R I + ++IIAGERR+RA++ A + +P ++R+V +++
Sbjct: 58 QALEELAQSIKLQGVMQPIVIRPIGDNRFEIIAGERRWRASQQAGVETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L +S + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 AIKTMLSHGDLEMGHARALLGLSEDRQVEGARHVVARGLTVRQTEALVRQWLSGKPEAAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 238 PVKA----DPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 289
>gi|26986746|ref|NP_742171.1| parB-like partition protein [Pseudomonas putida KT2440]
gi|148550503|ref|YP_001270605.1| parB-like partition protein [Pseudomonas putida F1]
gi|60392889|sp|P0A151|PARB_PSEPK RecName: Full=Probable chromosome-partitioning protein parB
gi|60392890|sp|P0A152|PARB_PSEPU RecName: Full=Probable chromosome-partitioning protein parB
gi|24981336|gb|AAN65635.1|AE016190_1 chromosome partitioning protein ParB [Pseudomonas putida KT2440]
gi|45714|emb|CAA44422.1| unnamed protein product [Pseudomonas putida]
gi|148514561|gb|ABQ81421.1| chromosome segregation DNA-binding protein [Pseudomonas putida F1]
gi|313496410|gb|ADR57776.1| ParB [Pseudomonas putida BIRD-1]
Length = 290
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 179/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ + S E+ + + + + + + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSGPSVS-ALEEQAVKIDQKELQHLPVELVQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI++HG++QP++VR I + Y+IIAGERR+RA + A L +P ++R V +++
Sbjct: 58 EALEELAHSIRNHGVMQPIVVRPIGDNRYEIIAGERRWRATQQAGLDTIPAMVREVPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNPLEEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPLEEAMALQRLQQEFELTQQQVADAVGKSRVTVANLLRLITLPD 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K +
Sbjct: 178 AIKTMLAHGDLEMGHARALLGLDENRQEEGARHVVARGLTVRQTEALVRQWLSDKPDPVE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
+ + + LE++++ ++G + I+H N KGQ I+Y + ++L+ + + +
Sbjct: 238 PSKP----DPDIARLEQRLAERLGSAVQIRHGNKGKGQLVIRYNSLDELQGVLAHI 289
>gi|146284510|ref|YP_001174663.1| chromosome partitioning protein ParB [Pseudomonas stutzeri A1501]
gi|145572715|gb|ABP81821.1| chromosome partitioning protein ParB [Pseudomonas stutzeri A1501]
gi|327482899|gb|AEA86209.1| chromosome partitioning protein ParB [Pseudomonas stutzeri DSM
4166]
Length = 290
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 182/296 (61%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+G + S E+ + + + + + PR +
Sbjct: 1 MA--TKKRGLGRGLDALLGGASVS-AMQEEAAKVDTRELQQLPLELVQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSI++HG++QP++VR ++ G Y+IIAGERR+RA++ A L VP ++R V +++
Sbjct: 58 QALEELAQSIRNHGVMQPIVVRPVEGGRYEIIAGERRWRASQQAGLERVPALVREVPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR V+N+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAVALQRLQQEFQLTQQQVADAVGKSRVSVSNLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ ++ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K+
Sbjct: 178 EIKTLLSHGDLEMGHARALLGLPADQQVEGARHVVARGLTVRQTEALVRQWLS----SKE 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + + ++ LE++++ ++G + IKH KGQ I+Y + ++L+ + + +
Sbjct: 234 KPKAEVKVDPDISRLEQRLAERLGSPVQIKHGQKGKGQLVIRYSSLDELQGVLAHI 289
>gi|66048353|ref|YP_238194.1| ParB-like partition protein [Pseudomonas syringae pv. syringae
B728a]
gi|302185831|ref|ZP_07262504.1| ParB-like partition protein [Pseudomonas syringae pv. syringae 642]
gi|63259060|gb|AAY40156.1| ParB-like partition protein [Pseudomonas syringae pv. syringae
B728a]
gi|330898618|gb|EGH30037.1| ParB-like partition protein [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330952343|gb|EGH52603.1| ParB-like partition protein [Pseudomonas syringae Cit 7]
gi|330976393|gb|EGH76450.1| ParB-like partition protein [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 290
Score = 172 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 181/296 (61%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSSPTVS-SLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIKS G++QP++VR I + ++IIAGERR+RA++ A + +P ++R+V +++
Sbjct: 58 QALEELAQSIKSQGVMQPIVVRPIGDNRFEIIAGERRWRASQQAGVETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 AIKTMLSHGDLEMGHARALLGLGEDRQVEGARHVVARGLTVRQTEALVRQWLSGKAEAAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 238 PVKT----DPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 289
>gi|114762200|ref|ZP_01441668.1| chromosome partitioning protein parB [Pelagibaca bermudensis
HTCC2601]
gi|114545224|gb|EAU48227.1| chromosome partitioning protein parB [Roseovarius sp. HTCC2601]
Length = 303
Score = 172 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 125/303 (41%), Positives = 193/303 (63%), Gaps = 8/303 (2%)
Query: 1 MSNNY-SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ ++R LGRGL+AL+ +V+ + ++ T + I S+VPN PR F
Sbjct: 1 MAEKKEARRGLGRGLSALMSDVDIAPAREQESM-TPKTPDRMVPIESLVPNKDQPRRTFT 59
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAID---NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
E L++L +SIK+ GIIQP+IVR G ++I+AGERR+RAA+MA EVPV++R +
Sbjct: 60 PEQLQELSESIKTKGIIQPIIVRPAPGAAEGQFEIVAGERRWRAAQMAKQHEVPVLVREL 119
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D++ +LEIAI+EN+QR DLN +EEA GY+ L+ +G+TQ I +GKSRSH+AN+LR+L
Sbjct: 120 DDQETLEIAIIENIQRADLNAIEEAAGYKALMFRFGHTQEKIAEALGKSRSHIANLLRLL 179
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
LP SV++ +R ++S GHARTLV+ +P ++A+ I++KK+SVR E LV+ K +
Sbjct: 180 NLPDSVQDYVRNGDLSAGHARTLVTAENPDAIAREIMAKKLSVRQAEALVRGASEPKRPK 239
Query: 237 KKIFEGSR-EKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLL 293
EK+ LE +S+ +G+ +S+ H+ G+ I YE+ E+L +C +L
Sbjct: 240 VSSSAPQAVEKDADTRALEGDLSAALGMKVSVAHKPGTEGGKLMISYESLEELDTLCMVL 299
Query: 294 GEN 296
+
Sbjct: 300 SAS 302
>gi|330970316|gb|EGH70382.1| ParB-like partition protein [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 290
Score = 172 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 181/296 (61%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSSPTVS-SLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIKS G++QP++VR + + ++IIAGERR+RA++ A + +P ++R+V +++
Sbjct: 58 QALEELAQSIKSQGVMQPIVVRPVGDNRFEIIAGERRWRASQQAGVETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 AIKTMLSHGDLEMGHARALLGLGEDRQVEGARHVVARGLTVRQTEALVRQWLSGKAEAAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 238 PVKT----DPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 289
>gi|325275320|ref|ZP_08141273.1| parB-like partition protein [Pseudomonas sp. TJI-51]
gi|324099568|gb|EGB97461.1| parB-like partition protein [Pseudomonas sp. TJI-51]
Length = 290
Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats.
Identities = 99/296 (33%), Positives = 179/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + + + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSGPTVS-ALEEQAVKIDQKELQHLPVELIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI++HG++QP++VR I + Y+IIAGERR+RA + A L +P ++R V +++
Sbjct: 58 QALEELAHSIRNHGVMQPIVVRPIGDNRYEIIAGERRWRATQQAGLDTIPAMVREVADEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNPLEEAL ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPLEEALALQRLQQEFELTQQQVADAVGKSRVTVANLLRLITLPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ M+ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 AIKTMLAHGDLEMGHARALLGLDENRQEEGARHVVARGLTVRQTEALVRQWLSDKPEPAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
+ + + LE++++ ++G + I+H N KGQ I+Y + ++L+ + + +
Sbjct: 238 PGKP----DPDIARLEQRLAERLGSAVQIRHGNKGKGQLVIRYNSLDELQGVLAHI 289
>gi|116053713|ref|YP_794040.1| chromosome partitioning protein Spo0J [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115588934|gb|ABJ14949.1| chromosome partitioning protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 290
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 176/296 (59%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+G + + E E I + + + PR +
Sbjct: 1 MA--AKKRGLGRGLDALLGGSSPAKLQEEAVQADRRE-LQQIPLDLMQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK+ G++QP++VR I NG Y+IIAGERR+RA++ A L ++P ++R+V +++
Sbjct: 58 QALEELAQSIKAQGVMQPIVVRPIGNGRYEIIAGERRWRASQQAGLEKIPALVRDVPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA ++L E+ TQ + VGKSR+ + N+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAAALQRLQQEFQLTQQQVAEAVGKSRATITNLLRLIGLPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ ++ ++ +GHAR L + + A+ +V+ ++VR TE LV +
Sbjct: 178 EIKTLLSHGDLEMGHARALLGLPAERQVEGARHVVAHGLTVRQTEALV----RQWTHAPG 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
G + + + LE++++ ++G ++ I+H KGQ I+Y + ++L+ + + +
Sbjct: 234 KPAGPVKSDPDIARLEQRLAERLGASVQIRHGQKGKGQLVIRYSSLDELQGVLAHI 289
>gi|294851287|ref|ZP_06791960.1| ParB family chromosome partitioning protein [Brucella sp. NVSL
07-0026]
gi|294819876|gb|EFG36875.1| ParB family chromosome partitioning protein [Brucella sp. NVSL
07-0026]
Length = 293
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 134/297 (45%), Positives = 189/297 (63%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SK+RLGRGLA LIGE+ D P ++ + + I I + NP NPR F
Sbjct: 1 MNDDPSKKRLGRGLAVLIGEI----DRPVEERKAPVPIERNIPIEFVTRNPRNPRRMFSE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LEDL QSIK HG++QP++VR +++IAGERR+RA++ A + +PVI+R+VD+
Sbjct: 57 TELEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWRASQRAGVDTIPVIVRDVDD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +LEIAI+ENVQR DLN +EEA+GY+QLI + YTQND+ ++GKSRSHVAN LR+LKL
Sbjct: 117 RVALEIAIIENVQRADLNSVEEAMGYQQLIDNHDYTQNDLAQVIGKSRSHVANTLRLLKL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ I +S HAR+L++T +P +LA+ IV + +SVR E LVQ + + K
Sbjct: 177 PQRVQDFIVDGALSASHARSLITTENPTALAERIVKEGLSVRQVEALVQAEARGGSEAKP 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
EK+ LEK +S G+ + I HR G I+Y + EQL IC L
Sbjct: 237 GKAAPAEKDADTKALEKLLSDVTGMKVEINHRERGGDVKIRYSSLEQLDEICRRLQS 293
>gi|254515879|ref|ZP_05127939.1| chromosome partitioning protein ParB [gamma proteobacterium NOR5-3]
gi|219675601|gb|EED31967.1| chromosome partitioning protein ParB [gamma proteobacterium NOR5-3]
Length = 291
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 102/298 (34%), Positives = 175/298 (58%), Gaps = 11/298 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQ-DCISIHSIVPNPHNPRNYFE 59
M+ +R LG+GL AL+ ++ D + + + + I + PR F+
Sbjct: 1 MA--AKRRSLGKGLDALLAGSSRPADPGATEVTVEEKGLLRELPVDLIQRGQYQPRRDFD 58
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L SI + G++QP++VR I N ++IIAGERR+RA ++A + +PV+IRNV ++
Sbjct: 59 PFALQELADSINAQGVMQPIVVRPIANERFEIIAGERRWRAVQLAGMDSIPVLIRNVSDE 118
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+++ ++++EN+QR+DLNP+EEA E+L E+ TQ + VGKSRS VAN+LR++ L
Sbjct: 119 ATIAMSLIENIQREDLNPIEEAYALERLQDEFDMTQQQVADAVGKSRSAVANLLRLMSLQ 178
Query: 180 SSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
S VR ++ ++ +GHAR L + + LA+ +V+K +SVR TE LV++ +
Sbjct: 179 SDVRTLLEHGDLDMGHARCLLTLDADQQIQLARRVVAKGLSVRQTEALVRQLQS-----D 233
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
K + + + L+ ++S K+G + I+H N KG+ + Y + ++L I S L
Sbjct: 234 KPKSEPKTIDPNIRSLQDELSQKLGSAVHIQHSANGKGKLILNYGSLDELDGILSHLK 291
>gi|149375656|ref|ZP_01893425.1| predicted transcriptional regulator [Marinobacter algicola DG893]
gi|149360058|gb|EDM48513.1| predicted transcriptional regulator [Marinobacter algicola DG893]
Length = 294
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 97/300 (32%), Positives = 169/300 (56%), Gaps = 12/300 (4%)
Query: 1 MSNNY--SKRRLG-RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
M+N KR LG RGL AL+ ++D K + + I I PR
Sbjct: 1 MTNTMAAKKRGLGERGLGALLQGSRVNLDQELKDHD---GELREVPIDLIQRGRFQPRRD 57
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ L++L SI+ G++QP++VR I G +++IAGERR+RA +MA L +P IIR+V
Sbjct: 58 MDPAALQELADSIRQQGVMQPVVVRPIAEGRFELIAGERRWRATQMAELDRIPAIIRDVP 117
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ +++ +A++EN+QR++LNP+EEA ++L E+G TQ + VGKSR+ + N+LR++
Sbjct: 118 DDAAIAMALIENIQRENLNPIEEAFALQRLQDEFGLTQAQVAEAVGKSRTTITNLLRLIS 177
Query: 178 LPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L VR M+ ++ +GH R + + + +A+ +V+K +SVR TE LV+ +++
Sbjct: 178 LSEDVRVMLEHGDLEMGHGRAMLTLQPEQQMQVARQVVAKSLSVRQTEALVR---RVQQE 234
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ E + + L+ ++ ++G +SI H KG+ I+Y + ++L I +
Sbjct: 235 SPNRKKAKGEVDPNIRALQDDLAERLGARVSIDHGQRGKGKLVIEYTSLDELDGILGHIK 294
>gi|254243107|ref|ZP_04936429.1| chromosome partitioning protein Spo0J [Pseudomonas aeruginosa 2192]
gi|126196485|gb|EAZ60548.1| chromosome partitioning protein Spo0J [Pseudomonas aeruginosa 2192]
Length = 290
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 176/296 (59%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+G + + E E I + + + PR +
Sbjct: 1 MA--AKKRGLGRGLDALLGGSSPAKLQEEAVQADRRE-LQQIPLDLMQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK+ G++QP++VR I NG Y+IIAGERR+RA++ A L ++P ++R+V +++
Sbjct: 58 QALEELAQSIKAQGVMQPIVVRPIANGRYEIIAGERRWRASQQAGLEKIPALVRDVPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA ++L E+ TQ + VGKSR+ + N+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAAALQRLQQEFQLTQQQVAEAVGKSRATITNLLRLIGLPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ ++ ++ +GHAR L + + A+ +V+ ++VR TE LV +
Sbjct: 178 EIKTLLSHGDLEMGHARALLGLPAERQVEGARHVVAHGLTVRQTEALV----RQWTHAPD 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
G + + + LE++++ ++G ++ I+H KGQ I+Y + ++L+ + + +
Sbjct: 234 KPAGPVKSDPDIARLEQRLAERLGASVQIRHGQKGKGQLVIRYSSLDELQGVLAHI 289
>gi|313111487|ref|ZP_07797288.1| chromosome partitioning protein Spo0J [Pseudomonas aeruginosa
39016]
gi|310883790|gb|EFQ42384.1| chromosome partitioning protein Spo0J [Pseudomonas aeruginosa
39016]
Length = 290
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 175/296 (59%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+G + + E E I + + + PR +
Sbjct: 1 MA--AKKRGLGRGLDALLGGSSPAKLQEEAVQADRRE-LQQIPLDLMQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK+ G++QP++VR I NG Y+IIAGERR+RA + A L ++P ++R+V +++
Sbjct: 58 QALEELAQSIKAQGVMQPIVVRPIANGRYEIIAGERRWRACQQAGLEKIPALVRDVPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA ++L E+ TQ + VGKSR+ + N+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAAALQRLQQEFQLTQQQVAEAVGKSRATITNLLRLIGLPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ ++ ++ +GHAR L + + A+ +V+ ++VR TE LV +
Sbjct: 178 EIKTLLSHGDLEMGHARALLGLPAERQVEGARHVVAHGLTVRQTEALV----RQWTHAPG 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
G + + + LE++++ ++G ++ I+H KGQ I+Y + ++L+ + + +
Sbjct: 234 KPAGPVKSDPDIARLEQRLAERLGASVQIRHGQKGKGQLVIRYSSLDELQGVLAHI 289
>gi|332559700|ref|ZP_08414022.1| Chromosome segregation DNA-binding protein [Rhodobacter sphaeroides
WS8N]
gi|332277412|gb|EGJ22727.1| Chromosome segregation DNA-binding protein [Rhodobacter sphaeroides
WS8N]
Length = 300
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 116/297 (39%), Positives = 184/297 (61%), Gaps = 8/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +R LGRGL+AL+ ++ +D+ + + + +VPNP+ PR F
Sbjct: 1 MEKKMERRGLGRGLSALMADIQVEVDAGQGAARRPD---LLVPVEKLVPNPNQPRRDFGP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E LEDL SI+ G+IQPLIVR + + Y+I+AGERR+RA+++A L EVPVI+R D+
Sbjct: 58 EALEDLAASIRQKGVIQPLIVRPMPDGDRYEIVAGERRWRASQLAQLHEVPVIVREFDDT 117
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+EN+QR DLN +EEA+GY QL+ +G+TQ + + +SRSH+AN+LR+L+LP
Sbjct: 118 EVLEVAIIENIQRADLNAIEEAMGYRQLMDRFGHTQEKLAEALSRSRSHIANLLRLLQLP 177
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+ +R+ +++ GHAR L++T + LA+ ++S+ +SVRDTE L + +++
Sbjct: 178 DDVQAWLREGKLTAGHARALITTPNASDLARQVISRNLSVRDTERLARGAGE--KRKPSA 235
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLG 294
G REK+ LE +S+ + + ++I H G+ I+Y T + L +C L
Sbjct: 236 PRGGREKDADTRALEADLSANLKMAVTIDHEPGGESGRLTIRYNTLDDLDTLCRTLS 292
>gi|221640723|ref|YP_002526985.1| Chromosome segregation DNA-binding protein [Rhodobacter sphaeroides
KD131]
gi|221161504|gb|ACM02484.1| Chromosome segregation DNA-binding protein [Rhodobacter sphaeroides
KD131]
Length = 301
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 116/297 (39%), Positives = 184/297 (61%), Gaps = 8/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +R LGRGL+AL+ ++ +D+ + + + +VPNP+ PR F
Sbjct: 2 MEKKMERRGLGRGLSALMADIQVEVDAGQGAARRPD---LLVPVEKLVPNPNQPRRDFGP 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E LEDL SI+ G+IQPLIVR + + Y+I+AGERR+RA+++A L EVPVI+R D+
Sbjct: 59 EALEDLAASIRQKGVIQPLIVRPMPDGDRYEIVAGERRWRASQLAQLHEVPVIVREFDDT 118
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+EN+QR DLN +EEA+GY QL+ +G+TQ + + +SRSH+AN+LR+L+LP
Sbjct: 119 EVLEVAIIENIQRADLNAIEEAMGYRQLMDRFGHTQEKLAEALSRSRSHIANLLRLLQLP 178
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+ +R+ +++ GHAR L++T + LA+ ++S+ +SVRDTE L + +++
Sbjct: 179 DDVQAWLREGKLTAGHARALITTPNASDLARQVISRNLSVRDTERLARGAGE--KRKPSA 236
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLG 294
G REK+ LE +S+ + + ++I H G+ I+Y T + L +C L
Sbjct: 237 PRGGREKDADTRALEADLSANLKMAVTIDHEPGGESGRLTIRYNTLDDLDTLCRTLS 293
>gi|152985893|ref|YP_001351675.1| chromosome partitioning protein Spo0J [Pseudomonas aeruginosa PA7]
gi|150961051|gb|ABR83076.1| chromosome partitioning protein Spo0J [Pseudomonas aeruginosa PA7]
Length = 290
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 176/296 (59%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+G + + E E I + + + PR +
Sbjct: 1 MA--AKKRGLGRGLDALLGGSSPAKLQEEAVQADRRE-LQQIPLDLMQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSI++ G++QP++VR I NG Y+IIAGERR+RA++ A L ++P ++R+V +++
Sbjct: 58 QALEELAQSIRAQGVMQPIVVRPIANGRYEIIAGERRWRASQQAGLEKIPALVRDVPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA ++L E+ TQ + VGKSR+ + N+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAAALQRLQQEFQLTQQQVAEAVGKSRATITNLLRLIGLPD 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ ++ ++ +GHAR L + + A+ +V+ ++VR TE LV +
Sbjct: 178 EIKTLLSHGDLEMGHARALLGLPVERQVEGARHVVAHGLTVRQTEALV----RQWSHAPG 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
G + + + LE++++ ++G ++ I+H KGQ I+Y + ++L+ + + +
Sbjct: 234 KPAGPVKSDPDIARLEQRLAERLGASVQIRHGQKGKGQLVIRYSSLDELQGVLAHI 289
>gi|15600755|ref|NP_254249.1| chromosome partitioning protein Spo0J [Pseudomonas aeruginosa PAO1]
gi|107104663|ref|ZP_01368581.1| hypothetical protein PaerPA_01005742 [Pseudomonas aeruginosa PACS2]
gi|218894665|ref|YP_002443535.1| chromosome partitioning protein Spo0J [Pseudomonas aeruginosa
LESB58]
gi|296392429|ref|ZP_06881904.1| chromosome partitioning protein Spo0J [Pseudomonas aeruginosa PAb1]
gi|9951903|gb|AAG08947.1|AE004968_1 chromosome partitioning protein Spo0J [Pseudomonas aeruginosa PAO1]
gi|218774894|emb|CAW30712.1| chromosome partitioning protein Spo0J [Pseudomonas aeruginosa
LESB58]
Length = 290
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 176/296 (59%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+G + + E E I + + + PR +
Sbjct: 1 MA--AKKRGLGRGLDALLGGSSPAKLQEEAVQADRRE-LQQIPLDLMQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK+ G++QP++VR I NG Y+IIAGERR+RA++ A L ++P ++R+V +++
Sbjct: 58 QALEELAQSIKAQGVMQPIVVRPIANGRYEIIAGERRWRASQQAGLEKIPALVRDVPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA ++L E+ TQ + VGKSR+ + N+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAAALQRLQQEFQLTQQQVAEAVGKSRATITNLLRLIGLPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ ++ ++ +GHAR L + + A+ +V+ ++VR TE LV +
Sbjct: 178 EIKTLLSHGDLEMGHARALLGLPAERQVEGARHVVAHGLTVRQTEALV----RQWTHAPG 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
G + + + LE++++ ++G ++ I+H KGQ I+Y + ++L+ + + +
Sbjct: 234 KPAGPVKSDPDIARLEQRLAERLGASVQIRHGQKGKGQLVIRYSSLDELQGVLAHI 289
>gi|110635796|ref|YP_676004.1| chromosome segregation DNA-binding protein [Mesorhizobium sp. BNC1]
gi|110286780|gb|ABG64839.1| chromosome segregation DNA-binding protein [Chelativorans sp. BNC1]
Length = 288
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 135/294 (45%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + S++RLGRGLAALIGE+++ + ++ + I I PNP NPR F
Sbjct: 1 MNEDPSRKRLGRGLAALIGEIDRPVMREQETVRAD----RLVPIEFISPNPRNPRRNFAE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L +L SI+ HGI+QP++VR Y+IIAGERR+RAA+ A L+E+PVIIR VD++
Sbjct: 57 GDLAELAHSIREHGIVQPVVVRPAPAAGRYEIIAGERRWRAAQKAGLTEIPVIIREVDDR 116
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++LE+AI+ENVQR DLNP+EEA GY+QL+ E+ YTQ D+ ++GKSRSHVAN LR+LKLP
Sbjct: 117 AALELAIIENVQRADLNPIEEARGYQQLMDEHNYTQADLAQVIGKSRSHVANTLRLLKLP 176
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+V ++I ++ GHARTLV+ +DP LA+ I+ + +SVR E L + +E
Sbjct: 177 DAVLDLIVDGSLTAGHARTLVTAADPAGLAKRIIEEGLSVRQAEALA----SAQEVGVTK 232
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ REK+ LEK ++ GL +SI H++ G+ I Y + EQL +C LL
Sbjct: 233 PKERREKDADTLSLEKLLTDHTGLKVSISHKDRGGEMRISYRSLEQLDELCRLL 286
>gi|260467203|ref|ZP_05813380.1| parB-like partition protein [Mesorhizobium opportunistum WSM2075]
gi|259029056|gb|EEW30355.1| parB-like partition protein [Mesorhizobium opportunistum WSM2075]
Length = 295
Score = 171 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 138/297 (46%), Positives = 195/297 (65%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS + S++RLGRGLAALIGE+ D P + + + I I PNP NPR +F
Sbjct: 1 MSEDLSRKRLGRGLAALIGEI----DRPAAPEKPGMSADGKVPIEFISPNPKNPRRHFGD 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L DL QSI+ HG++QP++ R Y+IIAGERR+RAA+ A L+E+PVIIR V++
Sbjct: 57 AELTDLAQSIREHGVVQPVVARPSPTQAGRYEIIAGERRWRAAQRAGLTEIPVIIREVND 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+++LE+AI+ENVQR DLN +EEA GY+QLI E+GYTQ D+G+++GKSRSHVAN LR+LKL
Sbjct: 117 RTALELAIIENVQRADLNAVEEAQGYQQLIDEHGYTQADLGNVIGKSRSHVANTLRLLKL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P +R+M+ +S GHARTLV+ DP LA+ IV + +SVR E L Q + K
Sbjct: 177 PDVIRDMLVDGALSAGHARTLVTAEDPAGLAKRIVEEGLSVRQAEALAQMPVGPTPAKPK 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+G+ EK+ LEK ++ +G+ ++I H+ G+ + Y + EQL +C L +
Sbjct: 237 QPQGAPEKDADTLALEKLMTDTLGMIVAIDHKGKGGELRVSYRSLEQLDELCRRLKQ 293
>gi|144899658|emb|CAM76522.1| chromosome partitioning protein parB [Magnetospirillum
gryphiswaldense MSR-1]
Length = 306
Score = 171 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 189/304 (62%), Gaps = 12/304 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEK--------KTETIPESQDCISIHSIVPNPH 52
M+ + +R+LGRGL+AL+G+ + + +TET P + + + P
Sbjct: 1 MAED-KRRKLGRGLSALLGDSGVAAAAAVVEGAAVLAGETETAPMGLRNLPVAQLKPGKF 59
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI 112
PR F+ + DL +S+++ G++QP++VR + G+++IIAGERR+RAA+ A L EVPVI
Sbjct: 60 QPRRQFDEAAIADLVESVRTKGVLQPILVRPHE-GMFEIIAGERRWRAAQRAQLHEVPVI 118
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
+R++ +K +LE+A+VEN+QR+DL LEEA GY +L+ E+ +TQ ++ VGKSRSHVAN+
Sbjct: 119 VRDLSDKEALEVALVENLQRQDLTALEEAEGYRRLVEEFSHTQEELARAVGKSRSHVANM 178
Query: 173 LRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
+R+L LP V++ + + ++S GHAR L++ +DP+ LAQ +V K+++VR TE+L +
Sbjct: 179 MRLLALPGPVKDFLDQGKLSAGHARALLTATDPVGLAQQVVDKQLNVRQTEKLAGGEAGG 238
Query: 233 KEKRKKIFEGSR--EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
K K + +K+ LE+ ++ ++G +S+ G+ I Y EQL I
Sbjct: 239 SAKAVKGKSQGKLFDKDADTAALERDLTEQLGCRVSLTSSGKGGELTIHYGNLEQLDDIL 298
Query: 291 SLLG 294
S L
Sbjct: 299 SRLS 302
>gi|330937311|gb|EGH41318.1| ParB-like partition protein [Pseudomonas syringae pv. pisi str.
1704B]
Length = 290
Score = 171 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 181/296 (61%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSSPTVS-SLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIKS G++QP++VR I + ++IIAGERR+RA++ A + +P ++R+V +++
Sbjct: 58 QALEELAQSIKSQGVMQPIVVRPIGDNRFEIIAGERRWRASQQAGVETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ ++ ++ +GHAR L + + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 AIKTLLSHGDLEMGHARALLGLGEDRQVEGARHVVARGLTVRQTEALVRQWLSGKAEAAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 238 PVKT----DPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 289
>gi|83944973|ref|ZP_00957339.1| chromosome partitioning protein ParB [Oceanicaulis alexandrii
HTCC2633]
gi|83851755|gb|EAP89610.1| chromosome partitioning protein ParB [Oceanicaulis alexandrii
HTCC2633]
Length = 312
Score = 171 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 181/306 (59%), Gaps = 11/306 (3%)
Query: 1 MSNNYSK--RRLGRGLAALIGEVNQSID-----SPEKKTETIPESQDCISIHSIVPNPHN 53
MS + K R LGRGL+AL+GE ++ S +++ + + I I PNP
Sbjct: 1 MSADERKPSRGLGRGLSALLGEGEEAEAVRADASNAQRSSSNRNGVQTLPIELIEPNPDQ 60
Query: 54 PRNYFESEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPV 111
PR F L +L SI + G++QP++VR + + Y+I+AGERR+RAA+ A L E P
Sbjct: 61 PRKVFTESDLAELADSIATKGLLQPILVRPMRGETERYQIVAGERRWRAAQRAQLHEAPC 120
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
++R + ++ +LEIAIVENVQR DLNP+EEA + QL+ +G+TQ ++ VGKSR+HVAN
Sbjct: 121 LVRELTDRETLEIAIVENVQRADLNPVEEARAFRQLVETFGHTQEEVAKAVGKSRAHVAN 180
Query: 172 ILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
LR+L +P +V + + I+ GHAR++ + +P +LA+ IV + +SVR E L +
Sbjct: 181 TLRLLAMPKAVLAYLEEGAITAGHARSIATAPNPEALAEQIVREGLSVRAAEALARTASG 240
Query: 232 KKEKRKKIFEGS--REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
++ S + K+ LE +SS++GL + IK + +G+ +K+ EQL +
Sbjct: 241 GGSSPERKSASSAPQTKDADTRALEADLSSRLGLAVEIKAKGEQGELRVKFSNLEQLDDV 300
Query: 290 CSLLGE 295
C L +
Sbjct: 301 CRRLSQ 306
>gi|312964006|ref|ZP_07778477.1| ParB-like partition protein [Pseudomonas fluorescens WH6]
gi|311282041|gb|EFQ60651.1| ParB-like partition protein [Pseudomonas fluorescens WH6]
Length = 290
Score = 171 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 93/296 (31%), Positives = 174/296 (58%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ E+ + + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSG-PTVTSLEEQAVQADERELQHLPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SIK+ G++QP++VR I G ++IIAGERR+RA++ A +P ++R+V +++
Sbjct: 58 QALEELANSIKAQGVMQPIVVRPIGAGRFEIIAGERRWRASQQAGKETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR V+N+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAIALQRLQQEFQLTQQQVAEAVGKSRVTVSNLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ M+ ++ +GHAR L + + + A+ +V++ +VR TE LV++ + K +
Sbjct: 178 VIKTMLSHGDLEMGHARALLGLPENQQVEGARHVVARGFTVRQTEALVRQWLSGKPAPVE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + + LE++++ ++G + I+H + KGQ I Y + ++L+ + + +
Sbjct: 238 TAKP----DPDIARLEQRLAERLGSAVQIRHGKKGKGQLVIGYNSLDELQGVLAHI 289
>gi|332308607|ref|YP_004436458.1| parB-like partition protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175936|gb|AEE25190.1| parB-like partition protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 290
Score = 171 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 171/297 (57%), Gaps = 10/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS KR LGRGL AL+ S ++ + + E +++ + P + PR
Sbjct: 1 MS--AKKRGLGRGLDALLATSQASRNAQDNQPEQNDSELQQLAVEFLKPGKYQPRKDMSP 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI+S G+IQP+IVR + N ++IIAGERR+RA+++A L VP ++++V +++
Sbjct: 59 DALEELASSIRSQGVIQPIIVRTLGNNEFEIIAGERRWRASQLAGLETVPCLVKDVPDEA 118
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ IA++EN+QR+DLN +EEA E+L+SE+ T ++ + VGKSR+ V N++R+ L
Sbjct: 119 AVAIALIENIQREDLNAMEEAQALERLMSEFELTHQEVATAVGKSRTTVTNLMRLNNLND 178
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +I +GHAR L + L A ++ K ++VRDTE LV++
Sbjct: 179 DVKLLLEHGDIEMGHARALLGLEGDAQLEAAHIVSGKGLTVRDTENLVRKFLE-----PA 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ ++ + + L+ K+S +G + I H KG+ I + + +QL I +
Sbjct: 234 TPKEEKKLDPDVVRLQDKLSQNLGAPVQIAHNAKGKGKVVINFSSLDQLDGILLHIK 290
>gi|119382764|ref|YP_913820.1| parB-like partition proteins [Paracoccus denitrificans PD1222]
gi|119372531|gb|ABL68124.1| parB-like partition protein [Paracoccus denitrificans PD1222]
Length = 292
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 118/297 (39%), Positives = 186/297 (62%), Gaps = 12/297 (4%)
Query: 1 MSNNY-SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ N KR LGRGL+AL+ +V+ P + + + + PNP PR F
Sbjct: 1 MAENKLEKRGLGRGLSALMADVDLIPSE-------RPAPRQILPVEQLTPNPDQPRRSFA 53
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L++L S+K+ G++QPLIVR Y+I+AGERR+RAA++A L EVPVI+R+++
Sbjct: 54 PEALQELADSLKTRGMLQPLIVRPHPTDRGLYQIVAGERRWRAAQIAQLHEVPVIVRDLN 113
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ LE+AIVEN+QR DLN +EEA Y QL+ +G+TQ +G + KSRSH+AN+LR+L
Sbjct: 114 DTEVLEVAIVENIQRADLNAIEEAASYRQLMDRFGHTQEKLGEALNKSRSHIANLLRLLN 173
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP V+ +++ +++ GHAR L++ S+ + LA+ ++ K +SVR+TEELV+ + K +
Sbjct: 174 LPEQVQAWLKEGKLTAGHARALITASNAVELARKVIEKNLSVRETEELVRR-QAEGPKAQ 232
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
K S+EK+ LE +++ + + ++I H + GQ I Y +QL +C +L
Sbjct: 233 KSRSASQEKDADTRALEGDLTAHLKMKVAINHSGTDGGQLVITYRDLDQLDRLCQIL 289
>gi|126667600|ref|ZP_01738569.1| chromosome partitioning protein Spo0J [Marinobacter sp. ELB17]
gi|126627869|gb|EAZ98497.1| chromosome partitioning protein Spo0J [Marinobacter sp. ELB17]
Length = 291
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 91/297 (30%), Positives = 169/297 (56%), Gaps = 11/297 (3%)
Query: 1 MSNNYSKRRLG-RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ KR LG RGL AL+ +++ + I++ I + PR +
Sbjct: 1 MA--AKKRGLGERGLGALLANSRVNLEQTPASQD---GELRDIALDLIQRGRYQPRRDMD 55
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L SI+ G++QP++VR + +++IAGERR+RAA+MA L +P IIR+V ++
Sbjct: 56 PAALQELADSIRQQGVMQPVVVRPLAAERFELIAGERRWRAAQMAGLESIPAIIRDVSDE 115
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+++ +A++EN+QR++LNP+EEA ++L E+G TQ + VGKSR+ + N+LR++ L
Sbjct: 116 AAIAMALIENIQRENLNPIEEAFALQRLQDEFGLTQAQVAEAVGKSRTTITNLLRLIGLT 175
Query: 180 SSVREMIRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
VR M+ ++ +GH R +++ + +A+ +V++ +SVR TE LV++ +K
Sbjct: 176 EDVRLMLEHGDLEMGHGRAMLTLAPEQQMQVARQVVARSLSVRQTEALVRQLQQEKPDSG 235
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + L+ ++ ++G ++I H KG+ I+Y + ++L I +
Sbjct: 236 --TAAKPRVDPNIRALQDDLAERLGARVAINHGQRGKGKLVIEYSSLDELDGILGHI 290
>gi|89052694|ref|YP_508145.1| chromosome segregation DNA-binding protein [Jannaschia sp. CCS1]
gi|88862243|gb|ABD53120.1| chromosome segregation DNA-binding protein [Jannaschia sp. CCS1]
Length = 301
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 115/303 (37%), Positives = 179/303 (59%), Gaps = 9/303 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD---CISIHSIVPNPHNPRNY 57
M+ KR LGRGL+AL+ ++ + + +T + I + IVPNP PR
Sbjct: 1 MARGTEKRGLGRGLSALMADIEPTASTHPDDAQTSATTSRGNRFIPVEQIVPNPDQPRRQ 60
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
F + L +L SI+ G+IQPLI+R D ++I+AGERR+RAA++A L E+P I+R
Sbjct: 61 FSQDSLNELAASIREKGVIQPLILRPDPKDQQRFQIVAGERRWRAAQIAQLHELPAIVRE 120
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
++ LE+AI+EN+QR DLNP+EEA GY QL+ ++G+TQ+ + + +GKSRSH+AN +R+
Sbjct: 121 FNDTEVLEVAIIENIQRADLNPVEEAQGYRQLMEKFGHTQDQLATAMGKSRSHLANTMRL 180
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L+LP + ++ ++S GHAR L++ DPL LA V + +SVR+ E + N +
Sbjct: 181 LQLPDEILTFVQDGKLSAGHARALITAEDPLGLALRAVKEGLSVREVERAAKSTKN--TR 238
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLL 293
+ K S K+ +E +S +G+++ I H G+ IKY+ QL + LL
Sbjct: 239 KNKAQSKSSNKDADTRIIESDLSRILGMSVVIDHDTDAGGGKLSIKYKDLAQLDDLLRLL 298
Query: 294 GEN 296
N
Sbjct: 299 NTN 301
>gi|332533710|ref|ZP_08409569.1| chromosome (plasmid) partitioning protein ParB / stage 0
sporulation protein J [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036874|gb|EGI73335.1| chromosome (plasmid) partitioning protein ParB / stage 0
sporulation protein J [Pseudoalteromonas haloplanktis
ANT/505]
Length = 308
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 100/312 (32%), Positives = 174/312 (55%), Gaps = 22/312 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETI------------PESQDCISIHSIV 48
MS KR LGRGL AL+ + + +++ + + I +
Sbjct: 1 MS--AKKRGLGRGLDALLSSSKPTPSASKEQDTSNVTEAVKNAAGPNNSELQKLPIEFLH 58
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
+ PR E LE+L SI+S GIIQP++VR I ++IIAGERR+RAA++A L
Sbjct: 59 SGKYQPRKDMSEEALEELASSIRSQGIIQPIVVRPIAQNSFEIIAGERRWRAAQIAKLET 118
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
VP II++V +++++ IA++EN+QR+DLN +EEA+ +L++E+ T + VGKSR+
Sbjct: 119 VPCIIKDVPDEAAVAIALIENIQREDLNAMEEAVALNRLLNEFELTHQQVADAVGKSRTT 178
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELV 226
V N+LR+ L S V+ ++ +I +GHAR L ++ A++ V+K ++VR+TE+LV
Sbjct: 179 VTNLLRLNNLNSDVKILLEHGDIEMGHARCLLALAGEAQSDAARLAVAKALTVRETEKLV 238
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQ 285
+ + EK+ + LE++++ +G + I ++ KG+ I Y ++
Sbjct: 239 RSILEPV-----PAKEIAEKDPDVKQLEQQLAENLGAKVEINYNKKGKGKLVISYTNLDE 293
Query: 286 LKIICSLLGEND 297
L I + + +++
Sbjct: 294 LDGILNRINQDN 305
>gi|315128177|ref|YP_004070180.1| partitioning protein B [Pseudoalteromonas sp. SM9913]
gi|315016690|gb|ADT70028.1| partitioning protein B [Pseudoalteromonas sp. SM9913]
Length = 308
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 100/311 (32%), Positives = 171/311 (54%), Gaps = 22/311 (7%)
Query: 1 MSNNYSKRRLGRGLAALIG------------EVNQSIDSPEKKTETIPESQDCISIHSIV 48
MS KR LGRGL AL+ + ++ E + + I +
Sbjct: 1 MS--AKKRGLGRGLDALLSSSKPAPSESKEHDSANVTNAVENAAQPSNSELQKLPIEFLH 58
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
+ PR E LE+L SI+S GIIQP++VR + Y+IIAGERR+RAA++A L
Sbjct: 59 SGKYQPRKDMSEEALEELASSIRSQGIIQPIVVRPVAYNSYEIIAGERRWRAAQIAKLEF 118
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
VP II++V +++++ IA++EN+QR+DLN +EEA+ +L++E+ T + VGKSR+
Sbjct: 119 VPCIIKDVPDEAAVAIALIENIQREDLNAMEEAIALNRLLNEFELTHQQVADAVGKSRTT 178
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELV 226
V N+LR+ L + V+ ++ +I +GHAR L + A++ V+K ++VR+TE+LV
Sbjct: 179 VTNLLRLNNLNNDVKILLEHGDIEMGHARCLLALEGEVQSDAARLAVAKALTVRETEKLV 238
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQ 285
+ + EK+ + LE++++ +G + I ++ KG+ I Y ++
Sbjct: 239 RSILE-----PAPAKEVIEKDPDVKQLEQQLADNLGAKVEINYNKKGKGKLVISYTNLDE 293
Query: 286 LKIICSLLGEN 296
L I + + ++
Sbjct: 294 LDGILNRINQD 304
>gi|119475228|ref|ZP_01615581.1| predicted transcriptional regulator [marine gamma proteobacterium
HTCC2143]
gi|119451431|gb|EAW32664.1| predicted transcriptional regulator [marine gamma proteobacterium
HTCC2143]
Length = 298
Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 107/301 (35%), Positives = 174/301 (57%), Gaps = 12/301 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSID-----SPEKKTETIPESQDCISIHSIVPNPHNPR 55
M+ KR LGRGL AL+G D SPE+ + + + I + PR
Sbjct: 1 MA--VKKRGLGRGLDALLGNNKTHADTKTDQSPERAVDNADGELRKLPVDLIQRGKYQPR 58
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
+ E LE+L +SIK G++QP++VR+I ++IIAGERR+RA ++A L +P IIRN
Sbjct: 59 RDMQPEALEELAESIKVQGVMQPIVVRSISAEKFEIIAGERRWRATQLAGLDTIPAIIRN 118
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
V +++++ +A++EN+QR+DLN +EEAL +L E+G TQ + VGKSRS V N+LR+
Sbjct: 119 VTDEAAIAMALIENIQREDLNAMEEALSLSRLQQEFGLTQQQVADAVGKSRSTVTNLLRL 178
Query: 176 LKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
+ L V+ M+ ++ LGHA+ L + A +V+K MSVR TE LV+ ++
Sbjct: 179 ISLRDDVQRMLEHGDLELGHAKALLGLPVEHQSHAAATVVTKGMSVRQTEVLVRSLLSQ- 237
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
+ + + + L+ ++S K+G+ ++++H N KG+ +KY + +L I S
Sbjct: 238 -LDSPKAKKNVPIDPDIKSLQNQLSDKIGVPVTLQHGTNGKGKLVLKYNSLNELDGILSH 296
Query: 293 L 293
+
Sbjct: 297 I 297
>gi|229593489|ref|YP_002875608.1| putative chromosome partitioning protein ParB [Pseudomonas
fluorescens SBW25]
gi|229365355|emb|CAY53738.1| putative chromosome partitioning protein ParB [Pseudomonas
fluorescens SBW25]
Length = 290
Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 93/296 (31%), Positives = 175/296 (59%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ E+ + + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSG-PTVTSLEEQAVQADERELQHLPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SIK+ G++QP++VR I G ++IIAGERR+RA++ A +P ++R+V +++
Sbjct: 58 QALEELANSIKAQGVMQPIVVRPIGGGRFEIIAGERRWRASQQAGKDTIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR V+N+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAIALQRLQQEFQLTQQQVAEAVGKSRVTVSNLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ M+ ++ +GHAR L + + + A+ +V++ ++VR TE LV++ + K +
Sbjct: 178 VIKTMLSHGDLEMGHARALLGLPENQQVEGARHVVARGLTVRQTEALVRQWLSGKPAPVE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + + LE++++ ++G + I+H + KGQ I Y + ++L+ + + +
Sbjct: 238 TAKP----DPDIARLEQRLAERLGSAVQIRHGKKGKGQLVIGYNSLDELQGVLAHI 289
>gi|84684651|ref|ZP_01012552.1| chromosome partitioning protein parB [Maritimibacter alkaliphilus
HTCC2654]
gi|84667630|gb|EAQ14099.1| chromosome partitioning protein parB [Rhodobacterales bacterium
HTCC2654]
Length = 299
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 121/300 (40%), Positives = 182/300 (60%), Gaps = 6/300 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ R LGRGL+AL+ +V + +E + I I ++ NP PR F
Sbjct: 1 MATKKPNRGLGRGLSALMADVQTDAEVAHVGSEVQRKPDMLIPIENVEANPDQPRRRFTP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
EGLEDL SI+ GIIQPLIVR Y+I+AGERR+RAA++A L EVP IIR ++
Sbjct: 61 EGLEDLANSIREKGIIQPLIVRPHPAKEGAYEIVAGERRWRAAQVAQLHEVPAIIRGYND 120
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LE+AI+EN+QR DLNP+EEA GY L+ ++G+TQ + +GKSRSH+AN++R+L L
Sbjct: 121 TEALEVAIIENIQRADLNPIEEAAGYRDLMEKFGHTQEKLAEALGKSRSHIANMMRLLNL 180
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V EM+ +S G AR +++ +P+ LA+ V + +SVRD E L + + K++
Sbjct: 181 PEEVLEMVVDGRLSAGAARAIITAENPIELARRAVKEGLSVRDIERLAKSPTSPKKQSTP 240
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLGEN 296
+ +K+ LEK +S+ G+ +SI H++ +G I+Y T +Q +C +LG +
Sbjct: 241 AQKA--QKDADTVALEKSLSAASGMKVSIDHKDGDDQGTVTIRYATLDQFDDLCRMLGGD 298
>gi|239993736|ref|ZP_04714260.1| ParB family protein [Alteromonas macleodii ATCC 27126]
Length = 292
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 106/298 (35%), Positives = 171/298 (57%), Gaps = 12/298 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTE--TIPESQDCISIHSIVPNPHNPRNYF 58
MS KR LGRGL AL+ S + E + + I +VP + PR
Sbjct: 1 MS--ARKRGLGRGLDALLATSQSSAQKEQDAAEVNSTNGELSKLPIEYLVPGKYQPRKDM 58
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E LE+L SI++ GIIQP++VR +D Y+IIAGERR+RA+++A L EVP +++NV +
Sbjct: 59 SPEALEELASSIRAQGIIQPIVVRKVDEHRYEIIAGERRWRASQLAQLDEVPCLVKNVPD 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++++ IA++EN+QR+DLN +EEA ++L++E+ T ++ VGKSR+ V N+LR+ L
Sbjct: 119 EAAVAIALIENIQREDLNAMEEAQALDRLMNEFALTHQEVAEAVGKSRTTVTNLLRLNNL 178
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+ ++ +I +GHAR L + AQV+ K ++VRDTE+LV++
Sbjct: 179 NDDVKLLVEHGDIEMGHARALLALEGDTQSETAQVVSGKGLTVRDTEKLVKKLLE----- 233
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ ++ + + +L ++S +G +SI H KG+ I + EQL I S +
Sbjct: 234 PAKPKPEKKVDPDVQNLMTRLSENLGTPVSIDHNAKGKGKLTISFSDLEQLDGIISKI 291
>gi|70733506|ref|YP_263281.1| chromosome partitioning protein ParB [Pseudomonas fluorescens Pf-5]
gi|68347805|gb|AAY95411.1| chromosome partitioning protein ParB [Pseudomonas fluorescens Pf-5]
Length = 290
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 178/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSGPTVS-ALEEQAVQADQRELQHLPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SIKS G++QP++VR I G ++IIAGERR+RA++ A +P ++R+V +++
Sbjct: 58 QALEELANSIKSQGVMQPIVVRPIGGGRFEIIAGERRWRASQQAGQETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAVALQRLQQEFQLTQQQVAEAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ M+ ++ +GHAR L + + + A+ +V++ ++VR TE LV++ + K++ +
Sbjct: 178 VIKTMLSHGDLEMGHARALLGLPENQQVEGARHVVARGLTVRQTEALVRQWLSGKQEPAE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + + LE++++ ++G + I+H + KGQ I Y + ++L+ + + +
Sbjct: 238 PVKP----DPDIARLEQRLAERLGSAVQIRHGKKGKGQLVIGYNSLDELQGVLAHI 289
>gi|163791209|ref|ZP_02185626.1| chromosome partitioning protein ParB family [Carnobacterium sp.
AT7]
gi|159873540|gb|EDP67627.1| chromosome partitioning protein ParB family [Carnobacterium sp.
AT7]
Length = 296
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 110/297 (37%), Positives = 178/297 (59%), Gaps = 10/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+N SK LGRG+ AL G+ + + + E I + I PNP+ PR F+
Sbjct: 1 MANKNSK-GLGRGIDALFGDYAELSN-----IDAANEQVQQIPLTDIRPNPYQPRKTFDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L +SI+ G+ QP+I+R Y+IIAGERRFRA+K+A +P IIR D +
Sbjct: 55 TALNELAESIRISGVFQPIILRESKVKGYEIIAGERRFRASKIAEKETIPAIIREFDEEK 114
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DL LEEA YE ++ + TQ ++ + +GKSR ++AN LR+L LP
Sbjct: 115 MMEVAVLENLQREDLTSLEEAEAYEMMMKKLKLTQEEVATRLGKSRPYIANYLRLLGLPD 174
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+V+EM++KE+IS+G ART L LA+ +V ++VR E+LV + + K++ +
Sbjct: 175 AVKEMLQKEDISMGQARTLLGLKEKKQITKLAKRVVRDHLTVRQLEQLVNKMNQPKDEAE 234
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + K Y+ + E+++ K G ++SI +N KG+ I+Y + + L I +L
Sbjct: 235 QPTKNDK-KPYYIRESEERLMDKFGTSVSINEKNQKGKIEIEYLSTDDLTRILDILN 290
>gi|85712595|ref|ZP_01043642.1| Chromosome partitioning protein ParB [Idiomarina baltica OS145]
gi|85693586|gb|EAQ31537.1| Chromosome partitioning protein ParB [Idiomarina baltica OS145]
Length = 298
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 173/305 (56%), Gaps = 18/305 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQS--------IDSPEKKTETIPESQDCISIHSIVPNPH 52
MS KR LGRGL AL+ + S +++ + + I + P +
Sbjct: 1 MS--PKKRGLGRGLDALLTSNSASQQRQDGHQPPVEDEQHTLVKGELQKLPIEQLQPGRY 58
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI 112
PR E LEDL S+K+ GIIQP++VR I + Y+IIAGERR+RAA++A L VP +
Sbjct: 59 QPRKDMSPEALEDLAASVKAQGIIQPIVVRIIADDEYEIIAGERRWRAAQLAKLELVPCL 118
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
+++V +++++ IA++EN+QR+DLN +EEA ++L+ E+ T D+ VGKSR+ V N+
Sbjct: 119 VKDVPDEAAVAIALIENIQREDLNAMEEATALQRLLDEFNMTHQDVAQAVGKSRTTVTNL 178
Query: 173 LRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
LR+ L +SV+ ++ + +I LGHA+ L + S+AQ I +K M+VR+ E+LV++
Sbjct: 179 LRLNNLEASVKLLLERGDIELGHAKLLLALEGEQQASVAQHIAAKDMTVREAEKLVRK-- 236
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+ + + + LE +S ++G ++I H KG+ I Y ++L I
Sbjct: 237 ---TIEPPKQQDKPQPDADIERLEASLSERLGAKVAINHGRKGKGKVVINYTNLDELDGI 293
Query: 290 CSLLG 294
+ +
Sbjct: 294 LAHIK 298
>gi|13473772|ref|NP_105340.1| chromosome partitioning protein, ParB [Mesorhizobium loti
MAFF303099]
gi|14024523|dbj|BAB51126.1| chromosome partitioning protein; ParB [Mesorhizobium loti
MAFF303099]
Length = 295
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 137/297 (46%), Positives = 195/297 (65%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS + S++RLGRGLAALIGE+ D P + + + I + PNP NPR +F
Sbjct: 1 MSEDLSRKRLGRGLAALIGEI----DRPAAPEKPGMSADGKVPIEFLSPNPKNPRRHFGD 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L DL QSI+ HG++QP++ R Y+IIAGERR+RAA+ A L+E+PVIIR V++
Sbjct: 57 AELTDLAQSIREHGVVQPVVARPSPTQAGRYEIIAGERRWRAAQRAGLTEIPVIIREVND 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+++LE+AI+ENVQR DLN +EEALGY+QLI E+GYTQ D+G+++GKSRSHVAN LR+LKL
Sbjct: 117 RTALELAIIENVQRTDLNAVEEALGYQQLIDEHGYTQADLGNVIGKSRSHVANTLRLLKL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P +R+M+ +S GHARTLV+ DP LA+ IV + +SVR E L Q + K
Sbjct: 177 PDVIRDMLVDGALSAGHARTLVTAEDPAGLAKRIVEEGLSVRQAEALAQMPAGPTPAKPK 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + EK+ LEK ++ +G+ ++I H+ G+ + Y + EQL +C L +
Sbjct: 237 QPQAAPEKDADTLALEKLMTDTLGMIVAIDHKGKGGELRVSYRSLEQLDELCRRLKQ 293
>gi|260431968|ref|ZP_05785939.1| chromosome-partitioning protein ParB [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415796|gb|EEX09055.1| chromosome-partitioning protein ParB [Silicibacter lacuscaerulensis
ITI-1157]
Length = 298
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 123/299 (41%), Positives = 184/299 (61%), Gaps = 7/299 (2%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
MS +K R LGRGL+AL+ +V Q P+ + I + NP+ PR F
Sbjct: 1 MSAKKAKPRGLGRGLSALMADVTQEPQGQVMGEPRRPD--MKVPIEKLRANPNQPRRTFA 58
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L++L S+K GIIQPLIVR +NG Y+I+AGERR+RAA+MA L ++PVI+R D+
Sbjct: 59 PEQLDELAASVKEKGIIQPLIVRPTENGQYEIVAGERRWRAAQMAQLHDIPVIVREFDDT 118
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+EN+QR DLN +EEA GY+QL+ +G+TQ + +GKSRSH+AN+LR+L LP
Sbjct: 119 EVLEVAIIENIQRADLNAVEEAAGYKQLMDRFGHTQEKLAEALGKSRSHIANLLRLLSLP 178
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
S V+ ++ + ++S GHAR L++ +P LA+++V +SVR TE LV++Q +
Sbjct: 179 SDVQTLVVEGKLSAGHARALITAENPSELAKIVVKDGLSVRATEALVKKQQQSDTDKPVP 238
Query: 240 FEG--SREKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
+ K+ LEK +S+ + + + I H+ GQ + YE +QL +C+ L
Sbjct: 239 RSRNLNAGKDADTRALEKDLSAILAMKVVINHKPGTETGQVILTYENLDQLDDLCAKLS 297
>gi|260585086|ref|ZP_05852827.1| stage 0 sporulation protein J [Granulicatella elegans ATCC 700633]
gi|260157174|gb|EEW92249.1| stage 0 sporulation protein J [Granulicatella elegans ATCC 700633]
Length = 300
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 98/295 (33%), Positives = 163/295 (55%), Gaps = 3/295 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M N + LGRG+ AL G SI++ EK +T E+ + ISI I PNP+ PR F
Sbjct: 1 MVKNQKSKGLGRGIDALFGGNFDSIENLEK-VDTTNETVEEISISEIRPNPYQPRKEFNE 59
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SI+ G+ QP+IVR Y+++AGERR RA+K+A +P IIR +
Sbjct: 60 EALQELADSIREQGVFQPIIVRKSSIKGYELVAGERRLRASKLAGKETIPAIIREYSEEI 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+++A+VEN+QR+DL P++EAL Y+ L+ Q ++ +GKSR ++AN LR+L LP
Sbjct: 120 MIQVAVVENLQREDLRPIDEALAYKSLMDALKLNQEEVAKKIGKSRPYIANFLRLLSLPL 179
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V+ +++ ++S+GHAR L+ + + L + E +K+
Sbjct: 180 EVQTQLQEGQLSVGHARALLGLKKADKIVPLSKKVIEEGMTVRALEELIQTMNEPVEKVK 239
Query: 241 EGS--REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + K Y+ + E+++ K G ++ I + +G+ I+Y + + L I +L
Sbjct: 240 KIKTIQPKPAYIVESEERLMDKFGTSVQITPKGERGKIEIEYLSQKDLTRILDVL 294
>gi|109900601|ref|YP_663856.1| parB-like partition proteins [Pseudoalteromonas atlantica T6c]
gi|109702882|gb|ABG42802.1| parB-like partition protein [Pseudoalteromonas atlantica T6c]
Length = 290
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 98/297 (32%), Positives = 172/297 (57%), Gaps = 10/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS KR LGRGL AL+ S ++ ++++ +++ + P + PR
Sbjct: 1 MS--AKKRGLGRGLDALLATSQASRNAEGQQSQQNDSELQQLAVEFLKPGKYQPRKDMSP 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI+S GIIQP+IVRA+ ++IIAGERR+RA+++A L VP ++++V +++
Sbjct: 59 DALEELASSIRSQGIIQPIIVRAVGINEFEIIAGERRWRASQLAGLETVPCLVKDVPDEA 118
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ IA++EN+QR+DLN +EEA E+L+SE+ T ++ + VGKSR+ V N+LR+ L
Sbjct: 119 AVAIALIENIQREDLNAMEEAQALERLMSEFELTHQEVATAVGKSRTTVTNLLRLNNLHD 178
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +I +GHAR L + L A ++ K ++VRDTE LV++
Sbjct: 179 DVKLLLEHGDIEMGHARALLGLEGDSQLEAAHIVSGKGLTVRDTENLVRKFLE-----PA 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ ++ + + L+ ++S +G + I H KG+ I + + ++L I +
Sbjct: 234 SPKEEKKLDPDVVRLQDELSQNLGAPVQIAHNAKGKGKVVINFSSLDELDGILLHIK 290
>gi|190576399|ref|YP_001974244.1| putative chromosome partitioning protein [Stenotrophomonas
maltophilia K279a]
gi|190014321|emb|CAQ47968.1| putative chromosome partitioning protein [Stenotrophomonas
maltophilia K279a]
Length = 307
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 171/302 (56%), Gaps = 9/302 (2%)
Query: 1 MSNNY---SKRRLGRGLAALIG---EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNP 54
M+++ KR LGRGL AL+G V+Q + E + + + P + P
Sbjct: 1 MTSSKPAAKKRGLGRGLDALLGPKGAVSQVQATTAVIEPLPGEVLRKLPVGQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L SIKS G+IQP++VR + G Y+I+AGERR+RA+++A L EVPV++R
Sbjct: 61 RREMDEGKLSELADSIKSQGVIQPILVRQLPAGNYEIVAGERRWRASQLAGLDEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+++++ + +A++EN+QR+DLNPLEEA ++LISE+ T + VG+SR+ V+N+LR
Sbjct: 121 ELEDRTVIAMALIENIQREDLNPLEEAEALQRLISEFTLTHAEAAEAVGRSRAAVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQDNK 232
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q
Sbjct: 181 LLELPVAIRLLLETRRLEMGHARALLTLAPELAGKLAQEAADEGWSVREVERRAQAFAAG 240
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICS 291
K + + ++ + LE ++S +G ++I H KG+ I Y + L +
Sbjct: 241 KVPSNRPVATPKVQQADIASLETELSEALGAKVAINHGRGGKGKLIIHYTDLDTLDGVLE 300
Query: 292 LL 293
L
Sbjct: 301 KL 302
>gi|332143481|ref|YP_004429219.1| ParB family protein [Alteromonas macleodii str. 'Deep ecotype']
gi|327553503|gb|AEB00222.1| ParB family protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 292
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 107/298 (35%), Positives = 171/298 (57%), Gaps = 12/298 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTE--TIPESQDCISIHSIVPNPHNPRNYF 58
MS KR LGRGL AL+ S + E + + I +VP + PR
Sbjct: 1 MS--ARKRGLGRGLDALLATSQSSAQKEQDAAEVNSTNGELSKLPIEYLVPGKYQPRKDM 58
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ LE+L SI++ GIIQP++VR +D Y+IIAGERR+RA+++A L EVP I++NV +
Sbjct: 59 SPDALEELASSIRAQGIIQPIVVRKVDEHRYEIIAGERRWRASQLAQLDEVPCIVKNVPD 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++++ IA++EN+QR+DLN +EEA ++L+SE+ T ++ VGKSR+ V N+LR+ L
Sbjct: 119 EAAVAIALIENIQREDLNAMEEAQALDRLMSEFALTHQEVAEAVGKSRTTVTNLLRLNNL 178
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+ ++ +I +GHAR L + AQV+ K ++VRDTE+LV++
Sbjct: 179 NDDVKLLVEHGDIEMGHARALLALEGETQSETAQVVSGKGLTVRDTEKLVKKLLE----- 233
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ ++ + + +L ++S +G +SI H KG+ I + EQL I S +
Sbjct: 234 PAKPKPEKKVDPDVQNLMTRLSENLGTPVSIDHNAKGKGKLTISFSDLEQLDGIISKI 291
>gi|254462286|ref|ZP_05075702.1| chromosome partitioning protein ParB [Rhodobacterales bacterium
HTCC2083]
gi|206678875|gb|EDZ43362.1| chromosome partitioning protein ParB [Rhodobacteraceae bacterium
HTCC2083]
Length = 298
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 127/299 (42%), Positives = 189/299 (63%), Gaps = 8/299 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M ++ R LGRGL+AL+ +V P T + I + PNP PR F
Sbjct: 1 MVDSKKNRGLGRGLSALMADVGPE---PTNTVTTPARPDLVVPIERVFPNPDQPRRSFTD 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L+DL SIK+ GIIQPLIVR + Y+I+AGERR+RAA+MA L E+PV++R+ +
Sbjct: 58 EHLQDLSASIKAKGIIQPLIVRKRANEKDEYEIVAGERRWRAAQMAQLHEIPVLVRDFTD 117
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
LE+AI+EN+QR DLNP+EEA GY QL+ ++G+TQ + +GKSRSH+AN++R+L+L
Sbjct: 118 AEVLEVAIIENIQRADLNPVEEAAGYRQLMDKFGHTQEKLAEELGKSRSHIANLMRLLQL 177
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
PS V++M+ ++S GHAR L+++ DP +LA+ +V + +SVR TE L +++D
Sbjct: 178 PSDVQDMLVGGKLSAGHARALITSDDPSALAKQVVQQGLSVRATEALAKKKDGGNSSPSS 237
Query: 239 IFEGS-REKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
+ S +EK+ LE +S+ +GL +S+ H+ GQ IKY + +QL IC +L
Sbjct: 238 RGKSSMKEKDADTKALESDLSAALGLTVSVDHKAGGESGQVSIKYASLDQLDEICRILS 296
>gi|319406394|emb|CBI80035.1| chromosome partitioning protein ParB [Bartonella sp. AR 15-3]
Length = 302
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 137/306 (44%), Positives = 197/306 (64%), Gaps = 15/306 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP---------EKKTETIPESQDCISIHSIVPNP 51
MS++ SK+RLGRGLAALIG++N + + K + S+ + I I NP
Sbjct: 1 MSDDQSKKRLGRGLAALIGDINLNGNPAYSASFDKFTSKPSVAPIASERFVPIEFISRNP 60
Query: 52 HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEV 109
+NPR F L+DL QSI+ HGI+QP+IVR +++IAGERR+RAA+ A+L+++
Sbjct: 61 NNPRRQFTDAELDDLVQSIRQHGIVQPIIVRPSRTHPNQFQLIAGERRWRAAQQANLNQL 120
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
PVIIR+VD+K++LE+AI+ENVQR DLNP+EE +GYE L++E+GYTQ D+ I+GKSRSHV
Sbjct: 121 PVIIRDVDDKTALELAIIENVQRTDLNPIEEGMGYELLLNEHGYTQADLAEIIGKSRSHV 180
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
N LR+LKLP V++ + +IS GHAR L++ +P LA+ ++ + +SVR TE LVQE
Sbjct: 181 TNTLRLLKLPQKVQQFLISGQISTGHARCLITVENPQELAEKVIREGLSVRQTEILVQEY 240
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
N K + +K+ LEK ++ +G+ + I+H G I Y + EQL I
Sbjct: 241 GNSKI----KKQIPFKKDIETQSLEKLLTDVIGMKVIIRHGKKGGDLKIHYSSLEQLDDI 296
Query: 290 CSLLGE 295
C L
Sbjct: 297 CRRLQS 302
>gi|330812743|ref|YP_004357205.1| chromosome partitioning protein, ParB [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327380851|gb|AEA72201.1| putative chromosome partitioning protein, ParB [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 290
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 178/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSGPTVS-SLEEQAVQVDQRELQHLPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIKS G++QP++VR I NG ++IIAGERR+RA++ A +P ++R+V +++
Sbjct: 58 QALEELAQSIKSQGVMQPIVVRPIANGRFEIIAGERRWRASQQAGQETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAVALQRLQQEFQLTQQQVAEAVGKSRVTVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ M+ ++ +GHAR L + + + A+ +V++ ++VR TE LV++ + K
Sbjct: 178 VIKTMLSHGDLEMGHARALLGLPENQQVEGARHVVARGLTVRQTEALVRQWLS----GKP 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + + + LE++++ ++G + I+H + KGQ I Y + ++L+ + + +
Sbjct: 234 APVEAPKTDPDIARLEQRLAERLGSAVQIRHGKKGKGQLVIGYNSLDELQGVLAHI 289
>gi|240851399|ref|YP_002972802.1| chromosome partitioning protein ParB [Bartonella grahamii as4aup]
gi|240268522|gb|ACS52110.1| chromosome partitioning protein ParB [Bartonella grahamii as4aup]
Length = 301
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 135/305 (44%), Positives = 202/305 (66%), Gaps = 14/305 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVN--------QSIDSPEKKTETIPESQDCISIHSIVPNPH 52
M+++ SK+RLGRGLAALIG+++ + D + P S+ + + SI NPH
Sbjct: 1 MNDDQSKKRLGRGLAALIGDISLNSDLTRSSNTDKFTESNTASPVSERFVPLESISCNPH 60
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVP 110
NPR +F L++L QSI+ HG++QP+IVR +++IAGERR+RAA+ A+L+++P
Sbjct: 61 NPRRHFTDSELDNLAQSIRQHGVVQPVIVRPSRDHPHHFELIAGERRWRAAQRANLNKLP 120
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
VI+R+VD+K++LE+AI+ENVQR DLNP+EEA+GYE L++E+GYTQ D+ ++GKSRSHVA
Sbjct: 121 VIVRDVDDKTALELAIIENVQRADLNPIEEAMGYEILLNEHGYTQADLAQVIGKSRSHVA 180
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
N LR+LKLP V++ + ++S GHAR L++ +P LA+ I+ + +SVR TE L EQ
Sbjct: 181 NTLRLLKLPPKVQQFLTDGQLSAGHARCLITVENPQDLAEKIIREGLSVRQTEILAYEQA 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
N K + EK+ LEK ++ +G+ ++I+H G I+Y + EQL IC
Sbjct: 241 NPKV----KKRTAVEKDTETKSLEKLLADVIGMKVTIRHGKKGGDLKIRYSSLEQLDDIC 296
Query: 291 SLLGE 295
L
Sbjct: 297 RRLQN 301
>gi|254511480|ref|ZP_05123547.1| chromosome partitioning protein ParB [Rhodobacteraceae bacterium
KLH11]
gi|221535191|gb|EEE38179.1| chromosome partitioning protein ParB [Rhodobacteraceae bacterium
KLH11]
Length = 297
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 122/298 (40%), Positives = 186/298 (62%), Gaps = 6/298 (2%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K R LGRGL+AL+ +V + P+ + I + NP PR F
Sbjct: 1 MNARKGKSRGLGRGLSALMADVAPEAEGRIASEPRRPD--LTVPIEKLQANPDQPRRRFA 58
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L++L S+K GIIQPLIVR+I +G Y+I+AGERR+RAA+MA L ++PV+IR+ +
Sbjct: 59 QEQLDELAASVKEKGIIQPLIVRSIADGQYEIVAGERRWRAAQMAQLHDIPVVIRDFTDT 118
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+EN+QR DLN +EEA G++QL+ +G+TQ + +GKSRSH+AN+LR+L LP
Sbjct: 119 EVLEVAIIENIQRADLNAVEEAAGFKQLMDRFGHTQEKLAEALGKSRSHIANLLRLLSLP 178
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK-RKK 238
V+ ++ + ++S GHAR L++ DP LA+ +V +SVR TE LV++Q + EK K
Sbjct: 179 MDVQTLVIEGKLSAGHARALITAEDPSELAKQVVRDGLSVRATEALVKKQQGQPEKAAPK 238
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
+ + K+ LEK +S+ + + ++I H+ GQ + YE +QL +C+ L
Sbjct: 239 SRDLNAGKDADTRALEKDLSAILAMKVTINHKAGAESGQVVLAYENLDQLDDLCAKLS 296
>gi|294010012|ref|YP_003543472.1| ParB-like protein [Sphingobium japonicum UT26S]
gi|292673342|dbj|BAI94860.1| ParB-like protein [Sphingobium japonicum UT26S]
Length = 300
Score = 169 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 111/297 (37%), Positives = 184/297 (61%), Gaps = 4/297 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVN-QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M + LGRGL+AL+G+V + +P ++ I + I P+P PR +F+
Sbjct: 1 MKSAKRPHGLGRGLSALLGDVAREEPVAPTAVAPPSTKAIQSIEVALIQPHPEQPRRHFD 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L SI G+IQP+IVR G ++I+AGERR+RAA+ A L +P I+R+ D
Sbjct: 61 EGALQELADSIGKRGVIQPIIVRPHGGG-FQIVAGERRWRAAQRAQLHRIPAIVRDFDEA 119
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+LEIA++EN+QR+DLNP+EEA Y +LI+E+ ++Q + +VGKSRSHVAN++R+L LP
Sbjct: 120 ETLEIALIENIQREDLNPIEEAEAYRKLIAEFQHSQEALARLVGKSRSHVANLMRLLDLP 179
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN-KKEKRKK 238
+ V+ + ++++S+GHAR L+ D +LA+ + +K +SVRDTE+LV+ +K
Sbjct: 180 APVQRQVIEQKLSMGHARALIGAPDCENLARTVEAKGLSVRDTEQLVRRAKKGDGAPGRK 239
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
+R+ + + LE+ ++ +G+ + I + + G + Y T +QL ++C L
Sbjct: 240 RPAAARDDDPDIAALEQHLADILGVKVDIDYAQGGNGTLSLHYSTLDQLDMLCQRLS 296
>gi|77461955|ref|YP_351462.1| chromosome segregation DNA-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77385958|gb|ABA77471.1| putative chromosome partitioning protein ParB [Pseudomonas
fluorescens Pf0-1]
Length = 290
Score = 169 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 177/296 (59%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S + E + + + + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSGPTVSSLEEQAAQADSRE-LQHLPLDLLQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK+ G++QP++VR I G ++IIAGERR+RA++ A +P ++R+V +++
Sbjct: 58 QALEELAQSIKAQGVMQPIVVRPIGGGRFEIIAGERRWRASQQAGQETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ IA++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAIALIENIQREDLNPIEEAVALQRLQQEFQLTQQQVAEAVGKSRVTVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ M+ ++ +GHAR L + + + A+ +V++ ++VR TE LV++ + K + +
Sbjct: 178 VIKTMLSHGDLEMGHARALLGLPDNQQVEGARHVVARGLTVRQTEALVRQWLSGKPEPVE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + + LE++++ ++G + I+H + KGQ I Y + ++L+ + + +
Sbjct: 238 PAKP----DPDIARLEQRLAERLGSAVQIRHGKKGKGQLVIGYNSLDELQGVLAHI 289
>gi|256823849|ref|YP_003147812.1| parB-like partition protein [Kangiella koreensis DSM 16069]
gi|256797388|gb|ACV28044.1| parB-like partition protein [Kangiella koreensis DSM 16069]
Length = 298
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 104/302 (34%), Positives = 179/302 (59%), Gaps = 14/302 (4%)
Query: 5 YSKRRLGRGLAALIG------EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
SKR LG+GL AL+G + +S D + + I + P + PR
Sbjct: 1 MSKRGLGKGLDALLGGAMSKPQAKKSGDGAANEATEAERHLREMPIEFLQPGQYQPRRVM 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
EGL++L SI++ G+IQP+++R++ Y+IIAGERR+RAA+ A L EVPVII+ V +
Sbjct: 61 TEEGLDELADSIRAQGMIQPIVIRSVGKDKYEIIAGERRWRAAQRAGLHEVPVIIKEVPD 120
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++++ ++++EN+QR+DLN +EEA +L+ E+ T VGKSR+ V N+LR+++L
Sbjct: 121 EAAIAMSLIENIQREDLNAMEEAYALHRLMEEFDLTHQQTADAVGKSRTTVTNLLRLMQL 180
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ ++ + ++ +GHAR L + + A+++V+K M+VR+TE+LV+ +
Sbjct: 181 SEHCKTLLERGDLEMGHARALLSLEPARQTEAAKIVVAKAMTVRETEKLVRNINE----- 235
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLGE 295
K + EK+ ++ LE+++S K+G +++I H N KG I Y + ++L I LG
Sbjct: 236 PKKKTKAAEKDHHIKSLEEQLSEKIGASVAINHGNKGKGSLVINYHSLDELDGILQHLGI 295
Query: 296 ND 297
+
Sbjct: 296 KE 297
>gi|77464804|ref|YP_354308.1| chromosome segregation DNA-binding protein [Rhodobacter sphaeroides
2.4.1]
gi|77389222|gb|ABA80407.1| chromosome segregation DNA-binding protein [Rhodobacter sphaeroides
2.4.1]
Length = 301
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 115/297 (38%), Positives = 184/297 (61%), Gaps = 8/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +R LGRGL+AL+ ++ +D+ + + + ++PNP+ PR F
Sbjct: 2 MEKKMERRGLGRGLSALMADIQVEVDAGQGAARRPD---LLVPVEKLMPNPNQPRRDFGP 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E LEDL SI+ G+IQPLIVR + + Y+I+AGERR+RA+++A L EVPVI+R D+
Sbjct: 59 EALEDLAASIRQKGVIQPLIVRPMPDGDRYEIVAGERRWRASQLAQLHEVPVIVREFDDT 118
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+EN+QR DLN +EEA+GY QL+ +G+TQ + + +SRSH+AN+LR+L+LP
Sbjct: 119 EVLEVAIIENIQRADLNAIEEAMGYRQLMDRFGHTQEKLAEALSRSRSHIANLLRLLQLP 178
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+ +R+ +++ GHAR L++T + LA+ ++S+ +SVRDTE L + +++
Sbjct: 179 DDVQAWLREGKLTAGHARALITTPNASDLARQVISRNLSVRDTERLARGAGE--KRKPSA 236
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLG 294
G REK+ LE +S+ + + ++I H G+ I+Y T + L +C L
Sbjct: 237 PRGGREKDADTRALEADLSANLKMAVTIDHEPGGENGRLTIRYNTLDDLDTLCRTLS 293
>gi|27375741|ref|NP_767270.1| chromosome partitioning protein B [Bradyrhizobium japonicum USDA
110]
gi|27348879|dbj|BAC45895.1| chromosome partitioning protein B [Bradyrhizobium japonicum USDA
110]
Length = 302
Score = 168 bits (424), Expect = 9e-40, Method: Composition-based stats.
Identities = 125/299 (41%), Positives = 189/299 (63%), Gaps = 9/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ ++ RLGRGLA+LIG+V ++ P +Q + I I PNP NPR F
Sbjct: 8 MAD-EARSRLGRGLASLIGDVGGEAQHVDR-----PRAQRKVPIEFIKPNPRNPRRTFSE 61
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L++L SI+ HG+IQP++VR + Y+IIAGERR+RA++MA L EVP++ ++ +
Sbjct: 62 TELKELSDSIRQHGVIQPIVVRPVKGAQDRYEIIAGERRWRASQMAGLHEVPIVPVDISD 121
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LE AI+ENVQR+DLNP+EEA GY L +E+ +Q+DI +VGKSRSHVAN++R+ KL
Sbjct: 122 SDALEFAIIENVQREDLNPMEEAQGYHALANEFKRSQDDIAKVVGKSRSHVANMMRLTKL 181
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P+ V+ I +++ GHAR L+ DPL+ A+ IV + ++VR E L E+ + K +K
Sbjct: 182 PAEVQAFIATGQLTAGHARALIGVPDPLAAARRIVEEGLNVRQAEALAHEEGVPERKPQK 241
Query: 239 IFE-GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
G +EK+ DLEK++S +GL +++ HR+ G I Y +QL + L +
Sbjct: 242 ARSTGGKEKDPDTIDLEKRVSDALGLKVTVNHRDPGGSVQINYRNLDQLDEVMKRLAKG 300
>gi|56694932|ref|YP_165277.1| chromosome partitioning protein parB [Ruegeria pomeroyi DSS-3]
gi|56676669|gb|AAV93335.1| chromosome partitioning protein parB [Ruegeria pomeroyi DSS-3]
Length = 296
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 119/298 (39%), Positives = 189/298 (63%), Gaps = 7/298 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +N R LGRGL+AL+ +V Q ++ + P+ + I + NP+ PR F
Sbjct: 1 MVSN-KPRGLGRGLSALMADVTQPAEAAASEAARRPD--RTVPIEKLRANPNQPRRTFTE 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L++L SIK G++QPLIVR +D +Y+I+AGERR+RAA++A L +VPV++R +D+
Sbjct: 58 DALQELAASIKEKGVLQPLIVRPVDGDMYEIVAGERRWRAAQLAQLHQVPVLVRELDDTE 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LEIAI+EN+QR DLN +EEA GY QL+ ++G+TQ + +GKSRSH+AN+LR+L LP
Sbjct: 118 VLEIAIIENIQRADLNAVEEAAGYRQLMDKFGHTQEKLAEALGKSRSHIANLLRLLSLPD 177
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V+ ++ + ++S GHAR L+++ +P LA+++V +SVR TE LV++Q +
Sbjct: 178 DVQTLVVEGKLSAGHARALITSDNPSELAKIVVRDGLSVRATEALVKKQAEGDKPTATAR 237
Query: 241 EGS--REKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
S +K+ LEK +S+ + + ++I H+ GQ + YE +QL +C+ L
Sbjct: 238 PKSITADKDADTRALEKDLSAILAMKVAINHKPGTETGQVVLTYENLDQLDDLCAKLS 295
>gi|77361912|ref|YP_341487.1| partitioning protein B [Pseudoalteromonas haloplanktis TAC125]
gi|76876823|emb|CAI88045.1| ParB family protein [Pseudoalteromonas haloplanktis TAC125]
Length = 308
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 101/311 (32%), Positives = 174/311 (55%), Gaps = 22/311 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKK------------TETIPESQDCISIHSIV 48
MS KR LGRGL AL+ + S ++ T++ + I +
Sbjct: 1 MS--AKKRGLGRGLDALLSSSKPAPTSSNEQNSSNTTDIMHNVTQSQQSELQRLPIEFLH 58
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
+ PR E LE+L SI++ GIIQP++VR I Y+IIAGERR+RAA++A L
Sbjct: 59 SGKYQPRKDMSEEALEELASSIRAQGIIQPIVVRPIAQNSYEIIAGERRWRAAQIAKLDT 118
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
VP II++V +++++ IA++EN+QR+DLN +EEA+ +L++E+ T + VGKSR+
Sbjct: 119 VPCIIKDVPDEAAVAIALIENIQREDLNAMEEAVALNRLLNEFELTHQQVADAVGKSRTT 178
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELV 226
V N+LR+ L + V+ ++ +I +GHAR L + A++ V+K ++VR+TE+LV
Sbjct: 179 VTNLLRLNNLNNDVKTLLEHGDIEMGHARCLLALEGDTQSDAARLAVAKALTVRETEKLV 238
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQ 285
+ + + EK+ + LE++++ +G + I ++ KG+ I Y ++
Sbjct: 239 RSILEPV-----AAKEATEKDPDVKQLEQQLAENIGAKVEINYNKKGKGKLVISYTNLDE 293
Query: 286 LKIICSLLGEN 296
L I + + ++
Sbjct: 294 LDGILNRINQD 304
>gi|58039523|ref|YP_191487.1| chromosome partitioning protein ParB [Gluconobacter oxydans 621H]
gi|58001937|gb|AAW60831.1| Chromosome partitioning protein ParB [Gluconobacter oxydans 621H]
Length = 291
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 106/297 (35%), Positives = 174/297 (58%), Gaps = 11/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ S RLGRGLAAL+G+ + + P+ + + + P+P PR
Sbjct: 1 MAKKDSSPRLGRGLAALLGDQAPQLARA-TRANAQPQQLSSLPVDVLAPSPFQPRQDMNP 59
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L +L SI+S G++QPL+VR Y+IIAGERR+RA+++A L VPV IR +D+
Sbjct: 60 ERLSELADSIRSRGVLQPLLVRPDPEKPGHYQIIAGERRWRASQLAGLHSVPVHIRELDD 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++ A+VEN+QR DLNP+EEA G ++L+++Y TQ ++ VGKSR H+ N +R+L L
Sbjct: 120 TDAMAAALVENLQRADLNPIEEAEGLQRLVTDYTLTQEELAGAVGKSRPHITNTMRLLNL 179
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P VR +R E++ GHAR L++ DP++ A++++++ ++VR TE L ++ +
Sbjct: 180 PPEVRAYVRNGELTAGHARALLTHPDPVAAAKIVIARGLNVRQTEALAGGKNTQ------ 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ ++ + +E +SS++GL + I + G I Y + EQ + + LL
Sbjct: 234 -TPAKKARDAEILQIENDLSSRLGLKVHISYNGKKGGSLKIDYTSLEQFESVMRLLN 289
>gi|126734412|ref|ZP_01750159.1| ParB-like partition protein [Roseobacter sp. CCS2]
gi|126717278|gb|EBA14142.1| ParB-like partition protein [Roseobacter sp. CCS2]
Length = 295
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 116/298 (38%), Positives = 182/298 (61%), Gaps = 11/298 (3%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K R LGRGL+AL+ +V + + T + I + PNP PR F
Sbjct: 1 MARTTKKSRGLGRGLSALMSDVA----TEDAPQSTPKRPDLVVPIEQVQPNPDQPRRTFG 56
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ L++L SI G+IQPLIVR D+G+Y+I+AGERR+RAA+MA L E+PV++R+ D
Sbjct: 57 EDALKELAGSIAEKGVIQPLIVRPSPSDDGIYEIVAGERRWRAAQMAKLHEIPVLLRDYD 116
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ LEIAI+EN+QR DLNP++EA GY+QL+ +G+TQ+ + S +GKSRSH+AN+LR+L
Sbjct: 117 DTEVLEIAIIENIQRADLNPVDEAAGYKQLMDRFGHTQDKLASALGKSRSHIANLLRLLN 176
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP V+ + ++S GHAR LV LA+ ++ + +SVR+TE+L + K++
Sbjct: 177 LPDEVQTYLINGQLSAGHARALVGHDQAAELAREVIQRNLSVRETEKLA--KKGPAIKKR 234
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLL 293
+ K+ +E ++S+ + + ++I H G+ I Y++ EQL + +L
Sbjct: 235 SVPGAPVPKDADTVQIENELSATLNMKVTIDHSAGSEGGKMVIGYKSLEQLDDLMRVL 292
>gi|285016926|ref|YP_003374637.1| chromosome partitioning protein [Xanthomonas albilineans GPE PC73]
gi|283472144|emb|CBA14651.1| probable chromosome partitioning protein [Xanthomonas albilineans]
Length = 305
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 104/302 (34%), Positives = 173/302 (57%), Gaps = 11/302 (3%)
Query: 1 MSNNY-----SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR 55
MS KR LGRGL AL+G + +P T +S + + + P + PR
Sbjct: 1 MSAKPPALGAKKRGLGRGLEALLGST--AASTPTVDTLQPGDSLRRLPVGQLQPGKYQPR 58
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
+ L++L +SIK+ G+IQP++VR + G ++I+AGERR+RA+++A LS+VPV++R
Sbjct: 59 QEMDQAKLQELAESIKAQGVIQPIVVRELVPGTFEIVAGERRWRASQLAGLSDVPVVVRE 118
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+D+++ + +A++EN+QR+DLNPLEEAL ++LI E+ T + VG+SR+ V+N+LR+
Sbjct: 119 LDDRTVIAMALIENIQREDLNPLEEALALQRLIDEFSLTHAEAAEAVGRSRASVSNLLRL 178
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQ-DNK 232
L+LP ++R ++ + +GHAR L++ S LA + SVR+ E Q+ K
Sbjct: 179 LELPPTIRMLLEARRLEMGHARALLTLSPELASRLASDAADQGWSVREVEHRAQQFAAGK 238
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICS 291
+K G + + LE ++S +G ++I H KG+ I Y + L +
Sbjct: 239 VPSNRKPKPGRNAPQADIASLETELSESLGTKVAIAHGAGGKGKLVIHYTDLDTLDGVLE 298
Query: 292 LL 293
L
Sbjct: 299 RL 300
>gi|127514778|ref|YP_001095975.1| parB-like partition protein [Shewanella loihica PV-4]
gi|126640073|gb|ABO25716.1| chromosome segregation DNA-binding protein [Shewanella loihica
PV-4]
Length = 292
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 173/293 (59%), Gaps = 10/293 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSP--EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
KR LG+GL AL+ + + ++ E I++ + P + PR E L
Sbjct: 4 KKRGLGKGLDALLSTSHAAARQAPMQEAEPNNNEELKMIALDLLQPGKYQPRKDMSPEAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L +SIK+ GIIQP++VR + + Y+IIAGERR+RA+++A L +VP I++ V ++++
Sbjct: 64 EELAESIKTQGIIQPIVVRKVSDKGYEIIAGERRWRASQLAKLDKVPCIVKQVPDEAAGV 123
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR+DLN +EEA+ E+LI E+ T VGKSR+ V+N+LR+ L V+
Sbjct: 124 IALIENIQREDLNAMEEAIALERLIKEFELTHQQTADAVGKSRTTVSNLLRLNGLEEPVK 183
Query: 184 EMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
M+ +I +GHAR L + + +LA+ +++K+++VR+TE LV + N E K
Sbjct: 184 RMLEYGDIDMGHARALLALPGDEQTNLARTVIAKELTVRETERLVNKTLNPPEIVDK--- 240
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
K++ + LE ++ K+G +SI H + KG+ I Y+ +L I +
Sbjct: 241 --PAKDQDVARLESQLIEKLGAKVSISHNKKGKGKMVINYQNLAELDGIIEKI 291
>gi|49476314|ref|YP_034355.1| chromosome partitioning protein, parB [Bartonella henselae str.
Houston-1]
gi|49239122|emb|CAF28426.1| Chromosome partitioning protein, parB [Bartonella henselae str.
Houston-1]
Length = 301
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 142/305 (46%), Positives = 203/305 (66%), Gaps = 14/305 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVN--------QSIDSPEKKTETIPESQDCISIHSIVPNPH 52
M+++ SK+RLGRGLAALIG++N S + + + S+ + + SI+ NPH
Sbjct: 1 MNDDQSKKRLGRGLAALIGDINLNNNPTRSTSAEKLSESSTVSTFSEKLVPLESILCNPH 60
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVP 110
NPR +F E L++L QSI+ HGI+QP+IVR +++IAGERR+RAA+ LS++P
Sbjct: 61 NPRRHFTEEELDNLAQSIRQHGIVQPIIVRPSRNHPHCFELIAGERRWRAAQRVHLSQLP 120
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
VI+R+VDNK++LE+AI+ENVQR DLNP+EEA+GYE L++E+GYTQ D+ ++GKSRSHVA
Sbjct: 121 VIVRDVDNKTALELAIIENVQRADLNPIEEAMGYEILLNEHGYTQADLAQVIGKSRSHVA 180
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
N LR+LKLPS V++ + ++S GHAR L++ +PL LA+ I+ + +SVR TE LV EQ
Sbjct: 181 NTLRLLKLPSKVQKFLTDGQLSAGHARCLITVDNPLDLAEKIIREGLSVRQTEILVYEQA 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
N K S EK+ LEK ++ +G+ + I+H G I Y + EQL IC
Sbjct: 241 NPKV----KKRTSLEKDAETKSLEKLLADVIGMKVIIRHGKKGGDLKIHYSSLEQLDDIC 296
Query: 291 SLLGE 295
L
Sbjct: 297 RRLQS 301
>gi|119471635|ref|ZP_01614020.1| ParB family protein [Alteromonadales bacterium TW-7]
gi|119445414|gb|EAW26701.1| ParB family protein [Alteromonadales bacterium TW-7]
Length = 308
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 100/312 (32%), Positives = 169/312 (54%), Gaps = 22/312 (7%)
Query: 1 MSNNYSKRRLGRGLAALIG------------EVNQSIDSPEKKTETIPESQDCISIHSIV 48
MS KR LGRGL AL+ + + + + I +
Sbjct: 1 MS--AKKRGLGRGLDALLSSSKPAPSASKEQDTQNVTEVVQSTVSATDNPLQTLPIEFLH 58
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
+ PR E LE+L SI+S GIIQP++VR I + Y+IIAGERR+RAA++A L
Sbjct: 59 SGKYQPRKDMSEEALEELASSIRSQGIIQPIVVRPITHNSYEIIAGERRWRAAQIAKLDT 118
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
VP II++V +++++ IA++EN+QR+DLN +EEA+ +L++E+ T + VGKSR+
Sbjct: 119 VPCIIKDVPDEAAVAIALIENIQREDLNAMEEAVALNRLLNEFELTHQQVADAVGKSRTT 178
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELV 226
V N+LR+ L S V+ ++ +I +GHAR L + A+ V+K ++VR+TE+LV
Sbjct: 179 VTNLLRLNNLNSDVKILLEHGDIEMGHARCLLALEGEAQSDAARTAVAKALTVRETEKLV 238
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQ 285
+ + +K+ + LE++++ +G + I ++ KG+ I Y ++
Sbjct: 239 RAILE-----PAPAKQEHQKDPDVKQLEQQLAENLGAKVEINYNKKGKGKLVISYTNLDE 293
Query: 286 LKIICSLLGEND 297
L I + + ++
Sbjct: 294 LDGILNRINHDN 305
>gi|71274485|ref|ZP_00650773.1| ParB-like partition protein [Xylella fastidiosa Dixon]
gi|71898318|ref|ZP_00680491.1| ParB-like partition protein [Xylella fastidiosa Ann-1]
gi|170730588|ref|YP_001776021.1| chromosome partitioning protein [Xylella fastidiosa M12]
gi|71164217|gb|EAO13931.1| ParB-like partition protein [Xylella fastidiosa Dixon]
gi|71731841|gb|EAO33899.1| ParB-like partition protein [Xylella fastidiosa Ann-1]
gi|167965381|gb|ACA12391.1| chromosome partitioning protein [Xylella fastidiosa M12]
Length = 310
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 168/304 (55%), Gaps = 11/304 (3%)
Query: 1 MSNNY---SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQ-DCISIHSIVPNPHNPRN 56
M+ KR LGRGL AL+G S P E +P + I + P+ + PR
Sbjct: 1 MNKPSLPLKKRGLGRGLEALLGSKGGSSVPPTVAEEQLPGEVLRTLQITQLQPSKYQPRR 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L +L SIK+ G+IQP+IVR +D +++I+AGERR+RA+++ L+EVPVI+R +
Sbjct: 61 EMSEAKLAELADSIKAQGVIQPIIVRELDVDMFEIVAGERRWRASQLVGLTEVPVIVREL 120
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR+L
Sbjct: 121 DDRTVVAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAEAVGRSRAAVSNLLRLL 180
Query: 177 KLPSSVREMIRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+LP +R ++ ++ +GHAR L++ LA+ + SVR+ E Q+ K
Sbjct: 181 ELPLGIRTLLESHQLEMGHARALLTLAPELAAKLAKEAADQGWSVREVEHRAQQFAAGKV 240
Query: 235 KRKKIFEGSREKE----KYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKII 289
+ + + LE ++S ++G ++I H KG+ I Y + L +
Sbjct: 241 PDIRDKKSKSPASAPAQPDIASLETELSERLGTKVAINHGRAGKGKLVIHYTDLDVLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|99082708|ref|YP_614862.1| chromosome segregation DNA-binding protein [Ruegeria sp. TM1040]
gi|99038988|gb|ABF65600.1| chromosome segregation DNA-binding protein [Ruegeria sp. TM1040]
Length = 299
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 122/299 (40%), Positives = 181/299 (60%), Gaps = 6/299 (2%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M++ +K R LGRGL+AL+ +VN S E + + I + NP PR F
Sbjct: 1 MADKKTKPRGLGRGLSALMADVNADPVSTEGGRQPRNAEI-LVPIEKVQANPDQPRRQFL 59
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L+DL SIK G++QPLIVR D G+Y+I+AGERR+RAA+ A L EVPV+IR+ +
Sbjct: 60 QEDLDDLTASIKEKGVLQPLIVRPRDGGIYEIVAGERRWRAAQAAQLHEVPVLIRDYSDV 119
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+EN+QR DLN LEEA Y+QL+ ++G+TQ + +GKSRSH+AN++R+L LP
Sbjct: 120 EMLEVAIIENIQRSDLNALEEAQSYKQLMDKFGHTQEKMAEALGKSRSHIANLVRLLHLP 179
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+ ++ ++S GHAR L+++ + LA+ IV +SVR TE LV++
Sbjct: 180 EDVQSLVLDRKLSAGHARALITSDNASELAKKIVKGGLSVRATESLVKKDAAGTTSSSNS 239
Query: 240 FEGSRE--KEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
+ + K+ LE +S+ + + +SI H+ G I YET +QL +C+LL
Sbjct: 240 RKAKPQADKDADTRALENDLSAMIRMKVSIDHKPGGESGVVTISYETLDQLDDLCNLLS 298
>gi|88860628|ref|ZP_01135265.1| ParB family protein [Pseudoalteromonas tunicata D2]
gi|88817223|gb|EAR27041.1| ParB family protein [Pseudoalteromonas tunicata D2]
Length = 307
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 107/310 (34%), Positives = 178/310 (57%), Gaps = 23/310 (7%)
Query: 1 MSNNYSKRRLGRGLAALI------------GEVNQSIDSPEKKTETIPESQDCISIHSIV 48
MS KR LGRGL AL+ + + + DSPE + +T P + I +
Sbjct: 1 MS--AKKRGLGRGLDALLMSSKPPSATAVDHDSSVTPDSPEAQLQT-PSELQKLPIEFLQ 57
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
+ PR E LE+L SI++ GIIQP++VR I Y+IIAGERR+RAA++A L
Sbjct: 58 SGKYQPRRDMSEEALEELAASIRAQGIIQPIVVRTISENKYEIIAGERRWRAAQIAQLDV 117
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
VP +I+NV +++++ IA++EN+QR+DLN +EEA+ E+L++E+ T + VGKSR+
Sbjct: 118 VPCLIKNVPDEAAVAIALIENIQREDLNAMEEAVALERLLTEFELTHQQVADAVGKSRTT 177
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELV 226
V N+LR+ L V++++ +I +GHAR L + A+ +V+K ++VR+TE+LV
Sbjct: 178 VTNLLRLNNLNEDVKKLLEYGDIEMGHARCLLALEAELQSETARHVVAKALTVRETEKLV 237
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQ 285
++ + K+ + LE+++S +G +++I ++ KG+ I Y + E+
Sbjct: 238 KQTLEPL-----PAKLEVAKDPDVEQLERQLSDNLGAHVAISYNKKGKGKLVISYTSLEE 292
Query: 286 LKIICSLLGE 295
L I +
Sbjct: 293 LDGIIERINS 302
>gi|85714099|ref|ZP_01045088.1| ParB-like partition protein [Nitrobacter sp. Nb-311A]
gi|85699225|gb|EAQ37093.1| ParB-like partition protein [Nitrobacter sp. Nb-311A]
Length = 294
Score = 167 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 126/297 (42%), Positives = 182/297 (61%), Gaps = 8/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ ++ RLGRGLA+LIG+V E+ P Q + I + PNP NPR F
Sbjct: 1 MAD-EARSRLGRGLASLIGDVGGEAAHAER-----PRVQRKVPIEFLKPNPRNPRRAFSD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SIK HG+IQP++VR + ++IIAGERR+RAA+ A L E+P++ +V +
Sbjct: 55 IELNELSDSIKQHGVIQPIVVRPVKGMQDRFEIIAGERRWRAAQSAGLHEIPIVPVDVSD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LEIAIVENVQR+DLN +EEA GY L +E+ TQ++I IVGKSRSHVAN++R+ KL
Sbjct: 115 HVALEIAIVENVQREDLNAMEEAQGYHALANEFKRTQDEIAKIVGKSRSHVANMMRLTKL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+ +I E+S GHAR L+ DP + A+ IV++ ++VR E L ++ + K K
Sbjct: 175 PDDVQALIASGELSAGHARALIGVPDPSAAAKRIVAEGLNVRQAEALAHQEGVPERKPPK 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+K+ LE+++S +GL +++ HRN G I+Y EQL I L
Sbjct: 235 ARVDKPQKDPDTLALERRVSDALGLAVTVDHRNPGGVVQIRYRDLEQLDEILKRLDS 291
>gi|254523760|ref|ZP_05135815.1| chromosome partitioning protein [Stenotrophomonas sp. SKA14]
gi|219721351|gb|EED39876.1| chromosome partitioning protein [Stenotrophomonas sp. SKA14]
Length = 307
Score = 167 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Query: 1 MSNNY---SKRRLGRGLAALIG---EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNP 54
M+++ KR LGRGL AL+G V+Q + E +++ + P + P
Sbjct: 1 MTSSKPAAKKRGLGRGLDALLGPKGAVSQVQATTAVIEPLPGEVLRKLAVGQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L SIKS G+IQP++VR + G Y+I+AGERR+RA+++A L EVPV++R
Sbjct: 61 RREMDEGKLSELADSIKSQGVIQPILVRQLPAGNYEIVAGERRWRASQLAGLDEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+++++ + +A++EN+QR+DLNPLEEA ++LISE+ T + VG+SR+ V+N+LR
Sbjct: 121 ELEDRTVIAMALIENIQREDLNPLEEAEALQRLISEFTLTHAEAAEAVGRSRAAVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQDNK 232
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q
Sbjct: 181 LLELPVAIRLLLETRRLEMGHARALLTLAPELAGKLAQEAADEGWSVREVERRAQAFAAG 240
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICS 291
K + + ++ + LE ++S +G ++I H KG+ I Y + L +
Sbjct: 241 KVPSNRPVATPKVQQADIASLETELSEALGAKVAINHGRGGKGKLIIHYTDLDTLDGVLE 300
Query: 292 LL 293
L
Sbjct: 301 KL 302
>gi|92115734|ref|YP_575463.1| parB-like partition proteins [Nitrobacter hamburgensis X14]
gi|91798628|gb|ABE61003.1| chromosome segregation DNA-binding protein [Nitrobacter
hamburgensis X14]
Length = 294
Score = 167 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 127/297 (42%), Positives = 182/297 (61%), Gaps = 8/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ ++ RLGRGLA+LIG+V E+ P +Q + I + PNP NPR F
Sbjct: 1 MAD-EARSRLGRGLASLIGDVGGEAAHTER-----PRAQRKVPIEFLKPNPRNPRRAFSD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SIK HG+IQP++VR + ++IIAGERR+RAA+ A L EVP++ +V +
Sbjct: 55 VELGELSDSIKQHGVIQPIVVRPVKGAQDRFEIIAGERRWRAAQSAGLHEVPIVPVDVTD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LEIAI+ENVQR++LN +EEA GY L SE+ TQ+DI IVGKSRSHVAN++R+ KL
Sbjct: 115 NVALEIAIIENVQRENLNAMEEAQGYHALASEFKRTQDDIAKIVGKSRSHVANMMRLTKL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+ +I E+S GHAR L+ DP A+ IV++ ++VR E L E+ + K +K
Sbjct: 175 PDDVQALIASGELSAGHARALIGVPDPSMAAKRIVAEGLNVRQAEALAHEEGVPERKLQK 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
K+ LEK++S +GL +++ H+N G I+Y +QL I L
Sbjct: 235 ARADKVLKDPDTLALEKRVSDALGLAVTVDHKNPGGVVHIRYRDLDQLDAILKRLDS 291
>gi|49474825|ref|YP_032867.1| chromosome partitioning protein, parb [Bartonella quintana str.
Toulouse]
gi|49240329|emb|CAF26811.1| Chromosome partitioning protein, parb [Bartonella quintana str.
Toulouse]
Length = 301
Score = 167 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 134/305 (43%), Positives = 199/305 (65%), Gaps = 14/305 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVN--------QSIDSPEKKTETIPESQDCISIHSIVPNPH 52
M+++ SK+RLGRGLAALIG+++ S D + + S+ + + SI NP+
Sbjct: 1 MNDDQSKKRLGRGLAALIGDISLNNNLAHSSSADKLPEFSTVSSVSEQFVPLESISCNPN 60
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVP 110
NPR +F L++L QSI+ HG++QP++VR +++IAGERR RAA+ A+L+++P
Sbjct: 61 NPRRHFTDSELDNLAQSIRQHGVVQPVVVRPSRDHPHRFELIAGERRLRAAQRANLNQLP 120
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
VIIR+VD+K++LE+AI+EN+QR DLNP+EE + YE L+SE+GYTQ D+ ++GKSRSHVA
Sbjct: 121 VIIRDVDDKTALELAIIENIQRSDLNPIEEGMAYEALLSEHGYTQADLAQVIGKSRSHVA 180
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
N LR+LKLP V++ + ++S GHAR LV+ ++P LA+ I+ + +SVR TE L EQ
Sbjct: 181 NTLRLLKLPPKVQQFLTNGQLSAGHARCLVTANNPQDLAERIICEGLSVRQTEILAYEQA 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
N K S EK+ + LEK ++ +G+ + I+H G I Y + EQL IC
Sbjct: 241 NTKV----KKRTSVEKDAEIKSLEKLLADVIGMKVIIRHGKKGGDLKIHYSSLEQLDYIC 296
Query: 291 SLLGE 295
L
Sbjct: 297 RCLQS 301
>gi|323135832|ref|ZP_08070915.1| parB-like partition protein [Methylocystis sp. ATCC 49242]
gi|322398923|gb|EFY01442.1| parB-like partition protein [Methylocystis sp. ATCC 49242]
Length = 291
Score = 167 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 138/298 (46%), Positives = 190/298 (63%), Gaps = 10/298 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +RRLGRGLAAL+G+ E+ P Q I I + PNP NPR F
Sbjct: 1 MAEEP-RRRLGRGLAALLGDAG------EEAPAERPRGQRKIPIEFLRPNPRNPRTMFRE 53
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L DL SI+ GIIQP++VRAI Y+IIAGERR+RAA+ A L+EVPV+I D+
Sbjct: 54 EDLADLAASIREKGIIQPIVVRAIAGVADAYEIIAGERRWRAAQTAGLTEVPVVIHEADD 113
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
K +LE+AI+ENVQR DLN +EEA GYE+L SE+GY+Q++I I+GKSRSHVAN +R+L L
Sbjct: 114 KEALELAIIENVQRADLNAIEEAKGYERLGSEFGYSQSEIAKIIGKSRSHVANTVRLLNL 173
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P + R+++ IS GHAR L+S DP ++A+ IV + M+VRD E L QEQ +
Sbjct: 174 PEATRKLVSDGAISAGHARALLSLPDPDAVARRIVEQGMTVRDVEALAQEQAATPRAAAR 233
Query: 239 IFEGSR-EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ EK+ +EK +S +G+ + I+H +G+ I Y++ +QL IC +L E
Sbjct: 234 ESRKPKAEKDADTKAIEKTLSDALGMAVDIRHDGERGEVRIYYKSLDQLDSICRMLSE 291
>gi|328958779|ref|YP_004376165.1| site-specific DNA-binding protein [Carnobacterium sp. 17-4]
gi|328675103|gb|AEB31149.1| site-specific DNA-binding protein [Carnobacterium sp. 17-4]
Length = 296
Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 113/296 (38%), Positives = 179/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+N SK LGRG+ AL G+ + + E I + I PNP+ PR F+
Sbjct: 1 MANKNSK-GLGRGIDALFGDYAELSN-----INAANEQVQKIPLTDIRPNPYQPRKTFDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L +SIK G+ QP+I+R Y+IIAGERRFRA+K+A +P IIR D +
Sbjct: 55 TALNELAESIKLSGVFQPIILRESKIKGYEIIAGERRFRASKLAGKETIPAIIREFDEEK 114
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DL LEEA YE ++ + TQ ++ + +GKSR ++AN LR+L LP
Sbjct: 115 MMEVAVLENLQREDLTSLEEAEAYEMMMKKLKLTQEEVATRLGKSRPYIANYLRLLGLPD 174
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+V+EM++KEEIS+G ART L LA+ +V + ++VR E+LV + + KE+ +
Sbjct: 175 AVKEMLQKEEISMGQARTLLGLKDKKQISKLAKRVVKEHLTVRQLEQLVNKMNQSKEEIE 234
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + ++ K Y+ + E+++ K G ++SI +N KG+ I+Y + + L I +L
Sbjct: 235 QPKKEAK-KPYYIRESEERLMDKFGTSVSINEKNQKGKIEIEYLSTDDLTRILDIL 289
>gi|307943446|ref|ZP_07658790.1| chromosome-partitioning protein ParB [Roseibium sp. TrichSKD4]
gi|307773076|gb|EFO32293.1| chromosome-partitioning protein ParB [Roseibium sp. TrichSKD4]
Length = 304
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 130/301 (43%), Positives = 198/301 (65%), Gaps = 8/301 (2%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M++ K +RLGRGLAALIG+ + + +PE ++ + I + PNP NPR F
Sbjct: 1 MADEGGKQKRLGRGLAALIGDASTTPAAPETSDRIQKDT-RQVPIEHLSPNPRNPRKTFT 59
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ L DL +S+++ GI+QP++VR Y+IIAGERR+RAA+ A L E P+IIR+V
Sbjct: 60 EKDLADLSESLRAKGIVQPILVRPAAGKTDRYEIIAGERRWRAAQRAGLHEAPIIIRDVT 119
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ +LE+AI+ENVQR DLNP+EEA+GYEQL +E+ Y+Q ++ ++GKSRSHVAN +R+LK
Sbjct: 120 DQEALELAIIENVQRADLNPIEEAMGYEQLTAEFKYSQGELAKVIGKSRSHVANTMRLLK 179
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELV--QEQDNKKEK 235
LP+SV++ + + ++ GHAR L++ DP +LA+++V K ++VRD E+L E +
Sbjct: 180 LPNSVKDYLAEGLLTAGHARALITVDDPAALAEILVEKGLTVRDAEKLAQDPEALARLMG 239
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLL 293
+ K EK+ LEK+++ +GL +++ H+ K G IKY + EQL IC L
Sbjct: 240 KGKEASPRPEKDADTKSLEKRLTDTLGLKVTLGHKAGKESGDLKIKYTSLEQLDEICKKL 299
Query: 294 G 294
G
Sbjct: 300 G 300
>gi|192361180|ref|YP_001984268.1| hypothetical protein CJA_3817 [Cellvibrio japonicus Ueda107]
gi|190687345|gb|ACE85023.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107]
Length = 303
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 88/305 (28%), Positives = 163/305 (53%), Gaps = 13/305 (4%)
Query: 1 MSNNYSKRRLGRGLAALIG----------EVNQSIDSPEKKTETIPESQDCISIHSIVPN 50
MS+ ++ LG+GL AL+G E+ + + K E + + I
Sbjct: 1 MSS--KRKGLGKGLDALLGAGLGVTAPAPEMPLDPAAADSKLEYKDGKLAHLPVELIQRG 58
Query: 51 PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
+ PR E LE+L +SIK G++QP++VR+I G Y+IIAGERR+RA ++A L ++P
Sbjct: 59 KYQPRRDMHPEALEELAESIKVQGVMQPIVVRSIGEGRYEIIAGERRWRATQLAGLDKIP 118
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
+IR+V +++++ +A++EN+QR++LNP+EEA+ ++L E+ T ++ VGKSR V
Sbjct: 119 AVIRDVPDEAAIAMALIENIQRENLNPIEEAMALKRLQDEFELTHAEVAQAVGKSRVTVT 178
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
N+LR++ L V+ ++ ++ +GHAR L++ + + +
Sbjct: 179 NLLRLIALTEDVKTLLEHGDLEMGHARALLTLEPAQQREIARQIVAKGLSVRQTEALVRQ 238
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
++ K + F+ + + L+ +S +G + I+H KG+ I Y + ++L I
Sbjct: 239 VQEGKNQDKFKPEQNVSADIRRLQDSLSETLGAGVEIQHGAKGKGKLVITYNSLDELDGI 298
Query: 290 CSLLG 294
+ +
Sbjct: 299 LAHIK 303
>gi|319899514|ref|YP_004159611.1| chromosome partitioning protein ParB [Bartonella clarridgeiae 73]
gi|319403482|emb|CBI77062.1| chromosome partitioning protein ParB [Bartonella clarridgeiae 73]
Length = 302
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 135/306 (44%), Positives = 194/306 (63%), Gaps = 15/306 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP---------EKKTETIPESQDCISIHSIVPNP 51
MS++ SK+RLGRGLAALIG++N + + K + S+ + I I NP
Sbjct: 1 MSDDQSKKRLGRGLAALIGDINLNGNPAYSASFDKFTSKPSVAPIASERFVPIEFISRNP 60
Query: 52 HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEV 109
+NPR F L+DL QSI+ HGI+QP+IVR +++IAGERR+RAA+ A+LS++
Sbjct: 61 NNPRRQFTDSELDDLVQSIRQHGIVQPIIVRPSRTHPNQFQLIAGERRWRAAQRANLSQL 120
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
PVIIR+VD+K++LE+AI+ENVQR DLNP+EE +GYE L++E+GYTQ D+ I+GKSRSHV
Sbjct: 121 PVIIRDVDDKTALELAIIENVQRTDLNPIEEGIGYELLLNEHGYTQADLAEIIGKSRSHV 180
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
N LR+LKLP V++ + +IS GHAR L++ +P LA+ I+ + +SVR TE + +
Sbjct: 181 TNTLRLLKLPQKVQQFLTAGQISAGHARCLITVENPQELAEKIIREGLSVRQTEMIAHKY 240
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
N K + K+ LEK ++ +G+ + I+H G I Y + EQL I
Sbjct: 241 GNYKI----KKQIPVRKDIETQSLEKLLTDVIGMKVIIRHGKKGGDLKIHYSSLEQLDDI 296
Query: 290 CSLLGE 295
C L
Sbjct: 297 CRRLQS 302
>gi|75674293|ref|YP_316714.1| ParB-like partition protein [Nitrobacter winogradskyi Nb-255]
gi|74419163|gb|ABA03362.1| chromosome segregation DNA-binding protein [Nitrobacter
winogradskyi Nb-255]
Length = 293
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 127/295 (43%), Positives = 181/295 (61%), Gaps = 8/295 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ ++ RLGRGLA+LIG+V E+ P Q + I + PNP NPR F
Sbjct: 1 MAD-EARSRLGRGLASLIGDVGGEAAHAER-----PRVQRKVPIEFLSPNPRNPRRTFSD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SIK HG+IQP++VR + ++IIAGERR+RAA+ A L EVP++ +V +
Sbjct: 55 VELAELSDSIKQHGVIQPIVVRPVKGMQDRFEIIAGERRWRAAQSAGLHEVPIVPVDVSD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LEIAIVENVQR+DLN +EEA GY L +E+ TQ+DI IVGKSRSHVAN++R+ KL
Sbjct: 115 HVALEIAIVENVQREDLNAMEEAQGYHALANEFNRTQDDIAKIVGKSRSHVANMMRLTKL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P VR +I E+S GHAR L+ DP + A+ I+++ ++VR E L E + K +K
Sbjct: 175 PDDVRALIASGELSAGHARALIGMPDPSTAAKRIIAEGLNVRQAEALAHEDGAAERKPQK 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K+ LEK++S +GL +++ H++ G I+Y +QL I L
Sbjct: 235 ARADKARKDSDTLALEKRVSDALGLAVTVDHKDPGGVVQIRYRDLDQLDEILKRL 289
>gi|194367737|ref|YP_002030347.1| parB-like partition protein [Stenotrophomonas maltophilia R551-3]
gi|194350541|gb|ACF53664.1| parB-like partition protein [Stenotrophomonas maltophilia R551-3]
Length = 307
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Query: 1 MSNNY---SKRRLGRGLAALIG---EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNP 54
M+++ KR LGRGL AL+G V+Q S E +++ + P + P
Sbjct: 1 MTSSKPAAKKRGLGRGLDALLGPKGAVSQVQASTAVIEPLPGEVLRKLAVGQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L SIKS G+IQP++VR + G Y+I+AGERR+RA+++A L EVPV++R
Sbjct: 61 RREMDEGKLSELADSIKSQGVIQPILVRQLPAGNYEIVAGERRWRASQLAGLDEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+++++ + +A++EN+QR+DLNPLEEA ++LISE+ T + VG+SR+ V+N+LR
Sbjct: 121 ELEDRTVIAMALIENIQREDLNPLEEAEALQRLISEFTLTHAEAAEAVGRSRAAVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQDNK 232
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q
Sbjct: 181 LLELPVAIRLLLETRRLEMGHARALLTLAPELAGKLAQEAADEGWSVREVERRAQAFAAG 240
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICS 291
K + + ++ + LE ++S +G ++I H KG+ I Y + L +
Sbjct: 241 KVPSNRPVATPKVQQADIASLETELSESLGAKVAISHGRGGKGKLIIHYTDLDTLDGVLE 300
Query: 292 LL 293
L
Sbjct: 301 KL 302
>gi|126663384|ref|ZP_01734382.1| chromosome partitioning protein [Flavobacteria bacterium BAL38]
gi|126625042|gb|EAZ95732.1| chromosome partitioning protein [Flavobacteria bacterium BAL38]
Length = 299
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 98/299 (32%), Positives = 159/299 (53%), Gaps = 4/299 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE-KKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I S E K + + + + I SI NP PR F
Sbjct: 1 MTKAVKKQALGRGLSALLKDPENDIKSAEDKNADKVVGNIIELDIESIEINPFQPRTNFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L++L +SIK G+IQP+ VR +D +++I+GERR RA+K+ L VP IR ++
Sbjct: 61 EETLQELAKSIKELGVIQPITVRKLDFNKFQLISGERRLRASKLIGLQTVPAYIRLANDN 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SL +A+VEN+QR DL+P+E A+ Y++LI E TQ ++ VGK RS + N LR+L+L
Sbjct: 121 ESLVMALVENIQRHDLDPIEVAISYQRLIEEINLTQEELSERVGKKRSTITNYLRLLRLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK-RKK 238
++ +R IS+GH R L++ + + + E N ++ + K
Sbjct: 181 PIIQTGMRDGFISMGHGRALINIENQDIQSDIYHKVVTQNLSVRETEALVKNYQDSLKPK 240
Query: 239 IFEGSREKEKYLTDLEKK-ISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ + + EKK ++ G + +K N KG+ I + + E I L+
Sbjct: 241 TAKPAKGNSFDIKEDEKKAFANYFGTKVDVKVAGNGKGKITIPFHSEEDFNRILKLINS 299
>gi|88705409|ref|ZP_01103120.1| chromosome partitioning protein parB [Congregibacter litoralis
KT71]
gi|88700499|gb|EAQ97607.1| chromosome partitioning protein parB [Congregibacter litoralis
KT71]
Length = 292
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 176/299 (58%), Gaps = 12/299 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPES--QDCISIHSIVPNPHNPRNYF 58
M+ +R LG+GL AL+ +S + E+ + + + I + PR F
Sbjct: 1 MA--TKRRSLGKGLDALLAGSQRSEEPSSAPEESSSDKGLLQELPVDLIQRGQYQPRRDF 58
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ L++L SIK+ G++QP++VR I ++IIAGERR+RA + A L +P +IRNV +
Sbjct: 59 DPFALQELADSIKAQGVMQPIVVRPIAKERFEIIAGERRWRAVQQAGLDTIPALIRNVSD 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+S++ ++++EN+QR+DLNP+EEA E+L +E+ TQ + VGKSRS VAN+LR++ L
Sbjct: 119 ESAIAMSLIENIQREDLNPIEEAYALERLQNEFEMTQQQVADAVGKSRSAVANLLRLIAL 178
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
VR M+ ++ +GHAR L + + LA+ +V+K +SVR TE LV++Q +
Sbjct: 179 APDVRTMLEHGDLDMGHARCLLTLDAEQQVQLARRVVAKGLSVRQTEALVRQQQS----- 233
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+K + + + L+ ++S K+G + I+H + KG+ + Y + ++L I S L
Sbjct: 234 EKPAAQPKTLDPNIRSLQDELSQKLGSAVHIQHSASGKGKLILNYGSLDELDGILSHLK 292
>gi|254502694|ref|ZP_05114845.1| ParB-like nuclease domain family [Labrenzia alexandrii DFL-11]
gi|222438765|gb|EEE45444.1| ParB-like nuclease domain family [Labrenzia alexandrii DFL-11]
Length = 301
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 133/303 (43%), Positives = 199/303 (65%), Gaps = 9/303 (2%)
Query: 1 MS-NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + +RLGRGLAALIG+ Q E + + I I PNP NPR F
Sbjct: 1 MADKDVKNKRLGRGLAALIGDSAQEASPA---PEKVVRDSRRVPIEHIEPNPRNPRKTFT 57
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ L DL +S+K+ GI+QP++VR ++IIAGERR+RAA+ A L E P+IIR+V
Sbjct: 58 EKDLADLSESLKAKGIVQPILVRPAAGKTNRFEIIAGERRWRAAQRAGLHEAPIIIRDVT 117
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ +LE+AI+ENVQR DLNP+EEA+GYEQL +++ Y+Q ++ ++GKSRSHVAN +R+LK
Sbjct: 118 DQEALELAIIENVQRADLNPIEEAMGYEQLTADFSYSQGELAKVIGKSRSHVANTMRLLK 177
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN-KKEKR 236
LP+SV++ + + ++ GHAR L++ DP +LA++IV K ++VRD E+L Q+ D K K
Sbjct: 178 LPNSVKDYLAEGLLTAGHARALITVDDPAALAELIVEKGLTVRDAEKLAQDPDALAKLKG 237
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLLG 294
+K +K+ LEK+++ +GL +++ H++ K G IKY + EQL IC LLG
Sbjct: 238 EKTPTEKLQKDADTKALEKRLADTLGLKVTVGHKSGKESGDLKIKYTSLEQLDQICRLLG 297
Query: 295 END 297
+
Sbjct: 298 VEN 300
>gi|159045998|ref|YP_001534792.1| chromosome partitioning protein parB [Dinoroseobacter shibae DFL
12]
gi|157913758|gb|ABV95191.1| chromosome partitioning protein parB [Dinoroseobacter shibae DFL
12]
Length = 299
Score = 166 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 123/300 (41%), Positives = 188/300 (62%), Gaps = 6/300 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQ-DCISIHSIVPNPHNPRNYFE 59
M +R LGRGL+AL+ +VN ++ E + + I S+ PNP PR F+
Sbjct: 1 MEKKPERRGLGRGLSALMADVNIGSETASVGNEASQANPDRLVPIESVRPNPDQPRRMFQ 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L+ L +SI+ GI+QPLIVR + Y+I+AGERR+RAA+MA L E+PV++R +
Sbjct: 61 QEDLDSLSESIREKGILQPLIVRPDPSDEDLYQIVAGERRWRAAQMAQLHEIPVLVRELS 120
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ SLEIAI+EN+QR DLNP+EEA GY QL+ +G+TQ + +GKSRSH+AN+LR++
Sbjct: 121 DTESLEIAIIENIQRADLNPVEEAQGYRQLMDRFGHTQERLAQALGKSRSHIANMLRLMS 180
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP+ V ++ +++GHAR L++ DP++LA+ +++K +SVR+TE L ++ D K
Sbjct: 181 LPAEVLSYLQDGTLAVGHARALITADDPVALAKKVIAKGLSVRETERLAKKADTSPGSTK 240
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLLGE 295
K + S EK+ LE +++ +G+ ISI H G I+Y + +QL +C L
Sbjct: 241 KPPKKS-EKDADTRALELDLAATLGMQISIDHTPGGETGALTIRYTSLDQLDDLCRRLSS 299
>gi|91795105|ref|YP_564756.1| parB-like partition proteins [Shewanella denitrificans OS217]
gi|91717107|gb|ABE57033.1| chromosome segregation DNA-binding protein [Shewanella
denitrificans OS217]
Length = 294
Score = 166 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 100/296 (33%), Positives = 175/296 (59%), Gaps = 12/296 (4%)
Query: 6 SKRRLGRGLAALIGEVNQSI----DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
KR LG+GL AL+ N + + T+ + + + + P + PR E
Sbjct: 4 KKRGLGKGLDALLSHSNAASRKTEQQEQANTDAMDGKLIELDLDLLQPGKYQPRRDMSPE 63
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LE+L +SI+S G+IQP++VR + +G Y+IIAGERR+RAA++A L+++P +++ V ++++
Sbjct: 64 ALEELAESIRSQGVIQPIVVRQVGSGQYEIIAGERRWRAAQLAQLNKIPCLVKQVADEAA 123
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+ IA++EN+QR+DLN +EEA+ +L+ E+ T + VGKSR+ V+N+LR+ L
Sbjct: 124 VAIALIENIQREDLNAMEEAVALNRLLEEFELTHQQVADAVGKSRASVSNLLRLNSLNEP 183
Query: 182 VREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+ ++ +I +GHAR L + + LA+++ SK+M+VR+TE LV +
Sbjct: 184 VKRLLENGDIDMGHARALLAIEGDEQTELARLVASKEMTVRETERLVNKAL-----LPAK 238
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
S+EK+ ++ LE+ + ++G +SI H G+ I Y+ +L I + +G
Sbjct: 239 TAESKEKDHDVSRLEQSLVERLGAKVSINHSAKGTGKIVINYQNLGELDGILAKIG 294
>gi|257866240|ref|ZP_05645893.1| chromosome partitioning protein ParB family [Enterococcus
casseliflavus EC30]
gi|257873246|ref|ZP_05652899.1| chromosome partitioning protein ParB family [Enterococcus
casseliflavus EC10]
gi|257875875|ref|ZP_05655528.1| chromosome partitioning protein ParB family [Enterococcus
casseliflavus EC20]
gi|325567660|ref|ZP_08144327.1| chromosome partitioning protein SpoOJ [Enterococcus casseliflavus
ATCC 12755]
gi|257800198|gb|EEV29226.1| chromosome partitioning protein ParB family [Enterococcus
casseliflavus EC30]
gi|257807410|gb|EEV36232.1| chromosome partitioning protein ParB family [Enterococcus
casseliflavus EC10]
gi|257810041|gb|EEV38861.1| chromosome partitioning protein ParB family [Enterococcus
casseliflavus EC20]
gi|325159093|gb|EGC71239.1| chromosome partitioning protein SpoOJ [Enterococcus casseliflavus
ATCC 12755]
Length = 296
Score = 166 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 107/295 (36%), Positives = 175/295 (59%), Gaps = 8/295 (2%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+ LGRG+ AL ++ ++ + E + ++ + PNP+ PR F+
Sbjct: 1 MKNKGKGLGRGIDALFQDLQGL-----EEVDIKTEKVVELPLNELRPNPYQPRKTFDELS 55
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L++L SI+ G+ QP+IVR Y+IIAGERRFRA+K+A +P IIRN D ++ +
Sbjct: 56 LQELANSIQHSGVFQPIIVRQSSVKGYEIIAGERRFRASKLAGKETIPAIIRNFDEEAMM 115
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
++A++EN+QR+DLNPLEEA Y+ L+ TQ + +GKSR ++AN LR+L LP V
Sbjct: 116 QVAVLENLQREDLNPLEEAEAYDMLMKNLKLTQAQVAERLGKSRPYIANYLRLLSLPKLV 175
Query: 183 REMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+EM++ + +S+G ARTL+ + + A V + ++VR E++V E ++ K ++KK+
Sbjct: 176 KEMVQDDRLSMGQARTLLGLKNKEQILKLANRCVKENLTVRQLEQMVAEMNDTKNEKKKV 235
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
REK YL + E+++ K G N+ I+ + KG+ I+Y + + L I LL
Sbjct: 236 PRLIREKPYYLRESEERLMDKFGTNVEIREKEGKGKIEIEYLSQKDLTRILDLLN 290
>gi|146278696|ref|YP_001168855.1| parB-like partition protein [Rhodobacter sphaeroides ATCC 17025]
gi|145556937|gb|ABP71550.1| chromosome segregation DNA-binding protein [Rhodobacter sphaeroides
ATCC 17025]
Length = 300
Score = 166 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 115/297 (38%), Positives = 180/297 (60%), Gaps = 8/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +R LGRGL+AL+ ++ +D + + + +VPNP+ PR F
Sbjct: 1 MERKMERRGLGRGLSALMADIQVEVDPGQGAGRRAD---LLVPVEKLVPNPNQPRRDFGP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII-AGERRFRAAKMASLSEVPVIIRNVDNK 119
E LEDL SI+ G+IQPLIVR I I AGERR+RA+++A + E+PVI+R D+
Sbjct: 58 EALEDLAASIRQKGVIQPLIVRPIPETDRYEIVAGERRWRASQLAQVHELPVIVREFDDT 117
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+EN+QR DLN +EEA+GY QL+ +G+TQ + + KSRSH+AN+LR+L+LP
Sbjct: 118 EVLEVAIIENIQRADLNAIEEAMGYRQLMDRFGHTQEKLAEALSKSRSHIANLLRLLQLP 177
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+ +R+ +++ GHAR L++T + LA+ ++S+ +SVRDTE L + + +++
Sbjct: 178 DEVQGWLREGKLTAGHARALITTPNASDLARQVISRNLSVRDTERLARGATD--KRKPSA 235
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLG 294
G REK+ LE +S+ + + ++I H G+ I+Y T + L +C L
Sbjct: 236 PRGGREKDADTRALEADLSANLKMAVTIDHEPGGESGRLTIRYNTLDDLDTLCRTLS 292
>gi|170739702|ref|YP_001768357.1| parB-like partition protein [Methylobacterium sp. 4-46]
gi|168193976|gb|ACA15923.1| parB-like partition protein [Methylobacterium sp. 4-46]
Length = 297
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 121/297 (40%), Positives = 190/297 (63%), Gaps = 8/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ ++ RLGRGLAALIG+V + Q + I + PNP NPR +F
Sbjct: 1 MAEEVARPRLGRGLAALIGDVGEDAPPAPIDRR----GQRRVPIEFLRPNPRNPRRHFAE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LE+L SI++ G+IQP++VR + ++I+AGERR+RAA+ A L EVPV++ +D+
Sbjct: 57 AELEELSASIRTRGVIQPIVVRGVAAVPDTFEIVAGERRWRAAQRAGLHEVPVVVVEIDD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++SLE AI+ENVQR DLNP+EEA GYE+L+SE+GY+Q ++ I+GKSRSH+AN LR+L L
Sbjct: 117 RTSLEYAILENVQRADLNPIEEAAGYERLMSEFGYSQTELAEIMGKSRSHLANTLRLLNL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELV--QEQDNKKEKR 236
P SV+E + ++ GHAR L++ DP ++A+ +V++ ++VR+ E L ++ +
Sbjct: 177 PPSVQEQVVAGALTAGHARALLAVRDPEAVARRVVAEGLTVREVEALAAAEQPAESGPRP 236
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ EK+ LE+++ +G+ +SI+HR G+ ++Y + +QL IC L
Sbjct: 237 GRPRRAPPEKDADTRALERRLEDALGVTVSIEHRGGGGELRLRYASLDQLDAICRRL 293
>gi|308051495|ref|YP_003915061.1| chromosome segregation DNA-binding protein [Ferrimonas balearica
DSM 9799]
gi|307633685|gb|ADN77987.1| chromosome segregation DNA-binding protein [Ferrimonas balearica
DSM 9799]
Length = 300
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 100/300 (33%), Positives = 168/300 (56%), Gaps = 14/300 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQ----SIDSPEKKTETIPESQDCISIHSIVPNPHNPRN 56
MS KR LG+GL AL+G + T+ ES + + ++ + PR
Sbjct: 1 MS--PKKRGLGKGLDALLGGSQAVAQRQPSTDIGATQPERESLSQLPVDALRRGVYQPRR 58
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
++ LE+L SIK+ G+IQP+IVR + Y+IIAGERR+RAA+MA L VP +I+ V
Sbjct: 59 DMANDALEELASSIKAQGVIQPIIVRQLAGDRYEIIAGERRWRAAQMAGLDTVPCLIKQV 118
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++ +++ IA++EN+QR+DLN +EEA+ ++L E+ T + VGKSR+ V N++R+
Sbjct: 119 EDNAAVAIALIENIQREDLNAMEEAIALKRLADEFELTHAQVAEAVGKSRATVTNLMRLN 178
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ ++ ++ +GHAR L++ + A+ + K+M+VRDTE+LVQ+
Sbjct: 179 SLNEEVKTLLEHGDLEMGHARALLALNGDAQTLAARQVAGKEMTVRDTEKLVQKLLE--- 235
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + + L ++++ ++G ++I H KG+ I Y +QL I L
Sbjct: 236 --PAPVATPAQPDPDIARLAEQLTERLGAQVAINHGRKGKGKLVINYTDLDQLDGILIKL 293
>gi|259417781|ref|ZP_05741700.1| ParB family protein [Silicibacter sp. TrichCH4B]
gi|259346687|gb|EEW58501.1| ParB family protein [Silicibacter sp. TrichCH4B]
Length = 299
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 123/299 (41%), Positives = 179/299 (59%), Gaps = 6/299 (2%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M++ K R LGRGL+AL+ +VN E + I + NP PR F
Sbjct: 1 MADKKPKPRGLGRGLSALMADVNAEPVRTEGGRPPRNAEI-LVPIEKVQANPDQPRRQFL 59
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L+DL SIK G++QPLIVR D G+Y+I+AGERR+RAA+ A L EVPV+IR+ +
Sbjct: 60 QEDLDDLTASIKEKGVLQPLIVRPRDGGIYEIVAGERRWRAAQAAQLHEVPVLIRDYSDV 119
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+EN+QR DLN LEEA Y+QL+ ++G+TQ + +GKSRSH+AN++R+L LP
Sbjct: 120 EMLEVAIIENIQRSDLNALEEAQSYKQLMDKFGHTQEKMAEALGKSRSHIANLVRLLHLP 179
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK--EKRK 237
V+ ++ ++S GHAR L+++ + LA+ IV +SVR TE LV++
Sbjct: 180 EDVQGLVLDRKLSAGHARALITSDNASELAKKIVKGGLSVRATESLVKKDAAGVAGTSGP 239
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLLG 294
K + EK+ LE +S+ + + +SI H+ G I YET +QL +C+LL
Sbjct: 240 KRAKTQVEKDADTRALESDLSAMIRMKVSIDHKAGGEAGTMTISYETLDQLDELCNLLS 298
>gi|294675617|ref|YP_003576232.1| chromosome-partitioning protein ParB [Rhodobacter capsulatus SB
1003]
gi|294474437|gb|ADE83825.1| chromosome-partitioning protein ParB [Rhodobacter capsulatus SB
1003]
Length = 300
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 121/301 (40%), Positives = 181/301 (60%), Gaps = 9/301 (2%)
Query: 1 MSN-NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ +R LGRGL+AL+ +V E + I IVPNP PR F
Sbjct: 1 MNERKPERRGLGRGLSALMADVQIPAAEAEVAPRRKD---MLVPIEKIVPNPDQPRRSFA 57
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E LE+L SI GIIQPLIVR ++I+AGERR+RAA++A L E+PVI+R+
Sbjct: 58 PEALEELRASIAEKGIIQPLIVRKHPKGEDSFEIVAGERRWRAAQLAKLHELPVIVRDFT 117
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ LE+AI+EN+QR DLNPLEEA+GY QL+ +G+TQ + + KSRSH+AN+LR+L
Sbjct: 118 DTEVLEVAIIENIQRADLNPLEEAMGYRQLMDRFGHTQEKLAEALSKSRSHIANLLRLLN 177
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP V++ +R+ +++ GHAR LV+ +DP+ LA+ +++ +SVRD E L +++ +
Sbjct: 178 LPEEVQDFLREGKLTAGHARALVTATDPVRLAKETIARGLSVRDVERLAKDETSAGPGVP 237
Query: 238 KI--FEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
REK+ LE +S+ +G+++SI H G+ I+Y T + L +C L
Sbjct: 238 SKSSSRAPREKDADTRALEADLSATIGMSVSIDHDGVEGGRLTIRYRTLDDLDHLCQALS 297
Query: 295 E 295
+
Sbjct: 298 Q 298
>gi|256848574|ref|ZP_05554015.1| chromosome partitioning protein ParB [Lactobacillus coleohominis
101-4-CHN]
gi|256714626|gb|EEU29606.1| chromosome partitioning protein ParB [Lactobacillus coleohominis
101-4-CHN]
Length = 297
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 107/301 (35%), Positives = 176/301 (58%), Gaps = 15/301 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N K LGRG+ AL + N + E+ + + +I PNP+ PR F+
Sbjct: 1 MAKN-KKMGLGRGIEALFEDNNL-------EEAQTGENVVDLKLSAIRPNPYQPRRIFDQ 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ L++L +SI G+ QP+IVR D+ Y+IIAGERR+RA+K+A + +P I+R+ D+
Sbjct: 53 KALKELAKSISESGVFQPIIVRQPDSQIERYEIIAGERRYRASKLAKQTTIPAIVRDFDD 112
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +E+A++EN+QR+DL PLEEA Y+ L+ + TQ ++ +GKSR ++AN LR+L L
Sbjct: 113 ERMMEVAVLENLQREDLTPLEEAQAYQTLMDKLMLTQAEVAKRLGKSRPYIANYLRLLSL 172
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLS---LAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P SV+E ++ E+S+G ARTL+ D +A+ ++ +++VR E+LV +N
Sbjct: 173 PESVKESLQAGELSMGQARTLLGLKDKQKVAVVARKAITNRLTVRQLEDLVASMNNDHGH 232
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLL 293
+ + K YL + E ++ SK G +++ + N G+ I Y + + L I LL
Sbjct: 233 KNHKKKVQHHKSPYLREAENELQSKFGTKVAVAPAAKKNTGKIEIPYTSADDLTRILELL 292
Query: 294 G 294
G
Sbjct: 293 G 293
>gi|53802707|ref|YP_112545.1| ParB family protein [Methylococcus capsulatus str. Bath]
gi|53756468|gb|AAU90759.1| ParB family protein [Methylococcus capsulatus str. Bath]
Length = 282
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 101/291 (34%), Positives = 168/291 (57%), Gaps = 15/291 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LGRGL AL+G E + + ES + I + P+P PR F+S L
Sbjct: 1 MKKPALGRGLEALLG---------EARLDPKQESLRKLPIEHLEPSPFQPRKDFDSAKLR 51
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI + GI+QP++VR+ + G Y+I+AGERR+RAA++A + EVPV++R V ++++L I
Sbjct: 52 ELADSISAQGIVQPIVVRSAEPGRYQIVAGERRWRAAQLAGVREVPVVVREVPDQAALAI 111
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNPLEEA ++L+ E+ T + +GKSR + N+ R+ L +
Sbjct: 112 ALIENIQREDLNPLEEAEAIQRLLEEHRMTHQQVADALGKSRVTITNLNRLNDLHPDAKA 171
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++R EI +GHAR L + A+ + K++SVR+TE LV + K
Sbjct: 172 LLRAGEIDMGHARALLALPYGQQGEAARRVAEKRLSVRETESLVNGLLKAADAGPK---P 228
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
++ + + LE++++ ++G + I+H G+ I Y + EQL+ + +
Sbjct: 229 AKVVDPDIARLERRMTERLGAGVRIQHGAKGAGRLVISYASLEQLEGLLAR 279
>gi|259047766|ref|ZP_05738167.1| stage 0 sporulation protein J [Granulicatella adiacens ATCC 49175]
gi|259035957|gb|EEW37212.1| stage 0 sporulation protein J [Granulicatella adiacens ATCC 49175]
Length = 299
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 110/296 (37%), Positives = 180/296 (60%), Gaps = 6/296 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS N + LGRG+ AL ++D+ E+ ET E I++ I PNP+ PR F+
Sbjct: 1 MSKNQKGKGLGRGIDALFMNDLDTLDALEQVQET--EQIQQIAVSEIRPNPYQPRKDFDE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
EGL +L +SI+ +G+ QP+IVR Y+++AGERR RA+K+A +P I+R+ ++
Sbjct: 59 EGLAELAESIRQNGVFQPIIVRKSKIKGYELVAGERRLRASKLAEKETIPAIVRDYSEET 118
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++IA+VEN+QR++L PL+EA+ Y L+ Q ++ S VGKSRS+VAN LR+L LP+
Sbjct: 119 MIQIAVVENLQRENLKPLDEAMAYRTLMDSLKLKQEEVASRVGKSRSYVANFLRLLTLPA 178
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+V+E+++ +S GHARTL+ D + A+ V + ++VRD E LVQ + +K
Sbjct: 179 AVQELVQNGSLSAGHARTLLGLKDQTKIGAVAKKAVKENLTVRDLETLVQSINEPVKKTT 238
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + + K Y+ + E+++ K G ++ I + +G+ I+Y + + L I +L
Sbjct: 239 KKIQKPK-KSMYIVESEERLMDKFGTSVQIVEKGERGKIEIEYLSQKDLTRILEVL 293
>gi|90421811|ref|YP_530181.1| parB-like partition proteins [Rhodopseudomonas palustris BisB18]
gi|90103825|gb|ABD85862.1| chromosome segregation DNA-binding protein [Rhodopseudomonas
palustris BisB18]
Length = 293
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 124/295 (42%), Positives = 178/295 (60%), Gaps = 8/295 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + RLGRGLA+LIG+V E+ P +Q + I + PNP NPR F
Sbjct: 1 MADEQ-RSRLGRGLASLIGDVGGEAAHLER-----PRAQRKVPIEFLKPNPRNPRRAFSD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SIK HG+IQP++VR I ++IIAGERR+RA+++A L EVP++ +V +
Sbjct: 55 AELGELSDSIKQHGVIQPIVVRPIKGAQDRFEIIAGERRWRASQLAGLHEVPIVPIDVSD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LEIAI+ENVQR+DLN LEEA GY L + + Q++I +VGKSRSHVAN++R+ +L
Sbjct: 115 SVALEIAIIENVQREDLNALEEAQGYHALAENFKHGQDEIAKLVGKSRSHVANMMRLTRL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+ +I ++S GHAR L+ D + AQ IV++ ++VR E L E+ + +K
Sbjct: 175 PDDVQALIAAGKLSAGHARALIGVPDASAAAQRIVAEGLNVRQAEALAHEEGVPERAPQK 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
G K+ LEK++S +G+ ISI R G IKY +QL I L
Sbjct: 235 ARAGKAAKDPDTLALEKRVSDALGMKISIDDRGGAGAVQIKYRDLDQLDDIVRRL 289
>gi|121535381|ref|ZP_01667193.1| parB-like partition proteins [Thermosinus carboxydivorans Nor1]
gi|121306073|gb|EAX47003.1| parB-like partition proteins [Thermosinus carboxydivorans Nor1]
Length = 298
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 104/298 (34%), Positives = 173/298 (58%), Gaps = 19/298 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ R LGRGL AL S D P + I+I I PN PR F+
Sbjct: 1 MTKA---RGLGRGLDALFPAAPASDDEP----------VNEIAIKEITPNRFQPRRTFDP 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L QSI+ +G++QP++VR Y+++AGERR+RA++MA L +P ++R+ +
Sbjct: 48 EALEELAQSIRQYGVVQPIVVRKT-MNGYELVAGERRWRASQMAGLKTIPAVVRDYTDAE 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
EIA++EN+QR+DLNP+EEA Y +L+ E+G TQ ++ +G+SRS +AN++R+L L
Sbjct: 107 MTEIALIENLQRQDLNPIEEANAYRRLMDEFGLTQEEVARKIGRSRSLIANMVRLLNLAP 166
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+V++ + + +++G AR L+ + A++I+++ +S RD EELV+ + RK
Sbjct: 167 AVQDHVSRGTLTVGQARPLLALDKEELQIEAAEMIIAEDLSARDAEELVKRLSS--APRK 224
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
K +KE ++ + E ++ +G + IK K + I++ + E L I +L E
Sbjct: 225 KKQSQPEKKEFFVAEAEDRLKLLLGTQVKIKPGKMKSKIEIEFYSMEDLDRILDILSE 282
>gi|21233273|ref|NP_639190.1| chromosome partitioning protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66770231|ref|YP_244993.1| chromosome partitioning protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|21115110|gb|AAM43081.1| chromosome partitioning protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575563|gb|AAY50973.1| chromosome partitioning protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 309
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 168/304 (55%), Gaps = 11/304 (3%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQS----IDSPEKKTETIPESQDCISIHSIVPNPHNP 54
MS KR LGRGL AL+G + ++ T ++ + + + P + P
Sbjct: 1 MSKPTPAKKRGLGRGLEALLGPKGAAAAAAPTGADESTLQPGDTLRQLPVTQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L +SIK+ G+IQP++ R + G ++I+AGERR+RA+++A LSEVPV++R
Sbjct: 61 RREMDEVKLAELAESIKAQGVIQPIVARELAPGQFEIVAGERRWRASQLAGLSEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR
Sbjct: 121 ELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAEAVGRSRASVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD-- 230
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q+
Sbjct: 181 LLELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAG 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+K + + + LE ++S +G + H KG+ I Y + L +
Sbjct: 241 KVPGSLRKGKPAAVAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|15838872|ref|NP_299560.1| chromosome partitioning protein [Xylella fastidiosa 9a5c]
gi|12230469|sp|Q9PB63|PARB_XYLFA RecName: Full=Probable chromosome-partitioning protein parB
gi|9107442|gb|AAF85080.1|AE004040_5 chromosome partitioning protein [Xylella fastidiosa 9a5c]
Length = 310
Score = 165 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 101/304 (33%), Positives = 168/304 (55%), Gaps = 11/304 (3%)
Query: 1 MSNNY---SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQ-DCISIHSIVPNPHNPRN 56
M+ KR LGRGL AL+G S P +P + I + P+ + PR
Sbjct: 1 MNKPSPPLKKRGLGRGLEALLGSKGGSSVPPTVAEGQLPGEVLRTLQITQLQPSKYQPRR 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L +L SIK+ G+IQP+IVR +D +++I+AGERR+RA+++A L+EVPV++R +
Sbjct: 61 EMSEPKLAELADSIKAQGVIQPIIVRELDVDMFEIVAGERRWRASQLAGLTEVPVLVREL 120
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR+L
Sbjct: 121 DDRTVVAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAEAVGRSRAAVSNLLRLL 180
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+LP +R +++ + +GHAR L++ + LA+ + SVR+ E Q+ K
Sbjct: 181 ELPLGIRTLLQSRRLEMGHARALLTLAPELADKLAKEAADQGWSVREVEHRAQQFAAGKV 240
Query: 235 KRKKIFEGSREKE----KYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKII 289
+ + + LE ++S +G ++I H KG+ I Y + L +
Sbjct: 241 PDIRDKKSKSPASAPAQPDIASLETELSEHLGTKVAINHGRAGKGKLVIHYTDLDVLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|319407868|emb|CBI81521.1| chromosome partitioning protein ParB [Bartonella sp. 1-1C]
Length = 302
Score = 165 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 140/306 (45%), Positives = 197/306 (64%), Gaps = 15/306 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP---------EKKTETIPESQDCISIHSIVPNP 51
MS++ SK+RLGRGLAALIGE+N + + K + S+ + I I NP
Sbjct: 1 MSDDQSKKRLGRGLAALIGEINLNGNPAYSASFDKFTSKPSVAPIASEKFVPIEFISRNP 60
Query: 52 HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEV 109
+NPR F L+DL QSI+ HGI+QP+IVR +++IAGERR+RAA+ A+L++V
Sbjct: 61 NNPRRQFTDSELDDLVQSIRQHGIVQPIIVRPSRTHPNQFQLIAGERRWRAAQRANLNQV 120
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
PVIIR+VD+K++LE+AI+ENVQR DLNP+EE +GYE L++E+GYTQ D+ I+GKSRSHV
Sbjct: 121 PVIIRDVDDKTALELAIIENVQRTDLNPIEEGIGYELLLNEHGYTQADLAEIIGKSRSHV 180
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
N LR+LKLP V++ + IS GHAR L++ +P LA+ I+ + +SVR TE L QE
Sbjct: 181 TNTLRLLKLPQKVQQFLIDGHISAGHARCLITVENPQELAEKIIHEGLSVRQTEILAQEY 240
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
N K K++ + K+ LEK ++ +G+ + I+H G I Y + EQL I
Sbjct: 241 GNSKIKKQTLVR----KDMETQSLEKLLTDVIGMKVIIRHGKKGGNLKIHYSSLEQLDDI 296
Query: 290 CSLLGE 295
C L
Sbjct: 297 CRRLQN 302
>gi|310644866|ref|YP_003949625.1| spo0j-like protein, parb-like nuclease domain protein
[Paenibacillus polymyxa SC2]
gi|309249817|gb|ADO59384.1| Spo0J-like protein, ParB-like nuclease domain protein
[Paenibacillus polymyxa SC2]
Length = 280
Score = 165 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 101/289 (34%), Positives = 170/289 (58%), Gaps = 15/289 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLG+GL ALI + T + + I + + NP+ PR F+ E +++L
Sbjct: 3 KRLGKGLDALIPSL----------TVSEEDKVVDIPLSQLRANPYQPRKTFDEESIKELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI+ HG+IQP+I R++ Y+IIAGERRFRA++ +PV++RN ++ +EIA++
Sbjct: 53 ESIRQHGVIQPIIARSV-LRGYEIIAGERRFRASQFCGNPTIPVVVRNFTDQQVMEIALI 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR++LN +E A+ Y+ L+ ++ TQ ++ VGKSRSH+AN LR+L LP V++ +
Sbjct: 112 ENLQRENLNAMEVAVAYQGLMDQFSLTQEELSMKVGKSRSHIANFLRLLALPEEVKDHVS 171
Query: 188 KEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ +S+GHAR + LA + ++ SVR+ EE VQ+ D K K R
Sbjct: 172 RGTLSMGHARAIVGLKDPDMVKQLALQCIEQQWSVRELEEAVQQLD-HKPGETKAKAKVR 230
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ Y+ +E+ + + + IKH +KG+ + Y + + L+ + LL
Sbjct: 231 KKDPYIDHMEESLRERFKTTVKIKHNKDKGKIELNYYSQQDLERLLELL 279
>gi|289666320|ref|ZP_06487901.1| chromosome partitioning protein [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289671107|ref|ZP_06492182.1| chromosome partitioning protein [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 309
Score = 165 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 167/304 (54%), Gaps = 11/304 (3%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNP 54
M+ KR LGRGL AL+G + + + +S + + + P + P
Sbjct: 1 MNKPMPAKKRGLGRGLEALLGPKGAAAAAAPSAASEDALQPGDSLRQLPVTQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L +SIK+ G+IQP++ RA+ G ++I+AGERR+RA+++A L+EVPV++R
Sbjct: 61 RREMDEVKLAELAESIKAQGVIQPIVARALAPGQFEIVAGERRWRASQLAGLTEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR
Sbjct: 121 ELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAGAVGRSRASVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD-- 230
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q+
Sbjct: 181 LLELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAG 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+K + + LE ++S +G + H KG+ I Y + L +
Sbjct: 241 KVPGSLRKGKPAPVAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|154251730|ref|YP_001412554.1| parB-like partition protein [Parvibaculum lavamentivorans DS-1]
gi|154155680|gb|ABS62897.1| parB-like partition protein [Parvibaculum lavamentivorans DS-1]
Length = 303
Score = 165 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 126/288 (43%), Positives = 177/288 (61%), Gaps = 4/288 (1%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
RLGRGLAALIG+ + S + P + I + NP PR+ F E LEDL
Sbjct: 9 SRLGRGLAALIGD--DTAFSLGDREAQAPRGVREVPIEFLRANPFQPRHTFRPEDLEDLA 66
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SI+ GI+QP++VR + ++I+AGERR+RAA+ A L +VPVI++ + + SLEIAI+
Sbjct: 67 NSIREKGILQPIVVRPLGENSFEIVAGERRWRAAQAAQLHQVPVIVKELTDAESLEIAII 126
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
ENVQR DLN +EEA GYE+L+ ++ YTQ + ++GKSRSHVAN LR+L LP VR +I
Sbjct: 127 ENVQRADLNAVEEAAGYERLMQQFHYTQEQLSKMIGKSRSHVANTLRLLALPQGVRSLIE 186
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE-GSREK 246
+ ++S G AR L+ +D S A+ IV+K +S R+ E L ++ + K EK
Sbjct: 187 EGKLSAGQARPLIGHADAESFAREIVAKGLSAREAEALTRKPEAGASSSTKPKALPKAEK 246
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQLKIICSLL 293
+ LEK IS ++GLN+ I +K G+ I Y+T EQL IC L
Sbjct: 247 DADTLALEKNISDQLGLNVEISFSGDKGGEVKIAYKTLEQLDEICRRL 294
>gi|319788433|ref|YP_004147908.1| parB-like partition protein [Pseudoxanthomonas suwonensis 11-1]
gi|317466945|gb|ADV28677.1| parB-like partition protein [Pseudoxanthomonas suwonensis 11-1]
Length = 312
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 101/308 (32%), Positives = 170/308 (55%), Gaps = 16/308 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSID--------SPEKKTETIPESQDCISIHSIVPNPH 52
M+ KR LGRGL AL+G + + + + + + + P +
Sbjct: 1 MATA-KKRGLGRGLEALLGPKGAAAAAASPAATLPEQLEQPQPGDVLRTLPVGQLQPGKY 59
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI 112
PR + LE+L SI++ G+IQP++VR I Y+I+AGERR+RA+++A L+EVPV+
Sbjct: 60 QPRRDMDPAKLEELSASIQAQGVIQPIVVREIGPDRYEIVAGERRWRASQLAGLAEVPVV 119
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
+R +D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + + VG+SR+ V+N+
Sbjct: 120 LRELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFALTHAEAAAAVGRSRAAVSNL 179
Query: 173 LRILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD 230
LR+L LP ++R ++ + +GHAR L++ S LA SVR+ E Q+
Sbjct: 180 LRLLDLPPAIRALVEARRLEMGHARALLTLSPDLASKLAHEAAENGWSVREVEHRAQQFA 239
Query: 231 NKKEKRK----KIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQ 285
K + + SRE++ + LE ++S +G ++I H KG+ I Y +
Sbjct: 240 AGKVPVTGNAARKAKASREQQPDIASLETELSESLGAKVAIAHGRGGKGKLVIHYTDLDT 299
Query: 286 LKIICSLL 293
L + L
Sbjct: 300 LDGVLERL 307
>gi|296271536|ref|YP_003654168.1| parB-like partition protein [Thermobispora bispora DSM 43833]
gi|296094323|gb|ADG90275.1| parB-like partition protein [Thermobispora bispora DSM 43833]
Length = 323
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 101/305 (33%), Positives = 160/305 (52%), Gaps = 18/305 (5%)
Query: 7 KRRLGRGLAALIG----------EVNQSIDSPEKKTETIPESQ-----DCISIHSIVPNP 51
+R LG+GL ALI N + +P ++ + I I +I PNP
Sbjct: 5 RRGLGKGLGALIPMGPSADLGVSGTNSTNSAPAAAPDSGLKPIEGAHYQEIPISAISPNP 64
Query: 52 HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPV 111
PR F+ E LE+L SIK G++QP++VR ++ Y+++ GERR+RAA++A L +P
Sbjct: 65 RQPREVFDEERLEELAASIKEVGLLQPVVVRPVEGDRYELVMGERRWRAAQLAGLERIPA 124
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
I+R + L A++EN+QR+ LNPLEEA Y+QL+ E+G T + VG+SRSH+ N
Sbjct: 125 IVRKTQDVEMLREALIENLQREQLNPLEEAAAYQQLLQEFGATHEALAKKVGRSRSHITN 184
Query: 172 ILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQE 228
LR+L LP +V+ + I+ GHAR L+ LA IV++ +SVR EE+V
Sbjct: 185 TLRLLNLPPNVQLRLAAGTITAGHARALLALDDPEAQERLANRIVAEGLSVRTVEEIVAL 244
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKI 288
+ + + L DL ++S + + KG+ +++ T + L+
Sbjct: 245 GEATAGPAPRKPRAKQPTPPALRDLADRLSDHFETKVKVDLGRRKGRIVVEFSTLDDLER 304
Query: 289 ICSLL 293
I +
Sbjct: 305 ILETM 309
>gi|257871373|ref|ZP_05651026.1| chromosome partitioning protein ParB family [Enterococcus
gallinarum EG2]
gi|257805537|gb|EEV34359.1| chromosome partitioning protein ParB family [Enterococcus
gallinarum EG2]
Length = 296
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 111/295 (37%), Positives = 176/295 (59%), Gaps = 8/295 (2%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+ LGRG+ AL ++ ++ + E + ++ + PNP+ PR F+
Sbjct: 1 MKNKGKGLGRGIDALFQDLQGL-----EEVDIKTEEVVELPLNELRPNPYQPRKTFDEVS 55
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L++L SI+ G+ QP+IVR Y+IIAGERRFRA+K+A +P IIR+ D ++ +
Sbjct: 56 LQELANSIQHAGVFQPIIVRKSTVKGYEIIAGERRFRASKLAKKETIPAIIRDFDEEAMM 115
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
++A++EN+QR+DLNPLEEA YE L+ TQ ++ + +GKSR ++AN LR+L LP V
Sbjct: 116 QVAVLENLQREDLNPLEEAEAYEMLMKNLKLTQAEVATRLGKSRPYIANYLRLLSLPKLV 175
Query: 183 REMIRKEEISLGHARTLVSTSDPL---SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+EM++ E +S+G ARTL+ + LA V + ++VR E+LV E ++ K ++KKI
Sbjct: 176 KEMVQDERLSMGQARTLLGLKNKDLILKLANRCVKENLTVRQLEQLVSEMNDAKNEKKKI 235
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
REK YL + E+++ K G N+ I + KG+ I+Y + + L I LL
Sbjct: 236 PRLIREKPYYLRESEERLMDKFGTNVEIHEKEGKGKIEIEYLSQKDLTRILDLLN 290
>gi|149912893|ref|ZP_01901427.1| chromosome partitioning protein parB [Roseobacter sp. AzwK-3b]
gi|149813299|gb|EDM73125.1| chromosome partitioning protein parB [Roseobacter sp. AzwK-3b]
Length = 302
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 125/305 (40%), Positives = 191/305 (62%), Gaps = 11/305 (3%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M++ +K R LGRGL+AL+ +VN+ + + + + I I PNP PR F+
Sbjct: 1 MTDKKTKQRGLGRGLSALMADVNEDKTTASEAPKPAD---RTVPIEKIRPNPDQPRRSFD 57
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ L+DL SIK GIIQPLIVR + D+ ++I+AGERR+RAA+MA L ++PV++R+ +
Sbjct: 58 KDKLDDLAASIKEKGIIQPLIVRPVPGDDTAFEIVAGERRWRAAQMAKLHQIPVLVRDFN 117
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ LEIAI+EN+QR DLNP+EEA GY QL+ ++G+TQ + ++GKSRS++AN +R+L
Sbjct: 118 DTEVLEIAIIENIQRADLNPVEEAAGYSQLMDKFGHTQEKLSEVLGKSRSYIANSVRLLT 177
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP V+ +R +S GHAR L++ D +LA ++ K +SVR+TE LV++ +
Sbjct: 178 LPEEVQAYLRDGRLSAGHARALITAEDAAALALEVIKKGLSVRETEALVKKSISNIFADP 237
Query: 238 ---KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSL 292
K S EK+ LE +S+ +G+ + + H+ KGQ I YET +QL +C +
Sbjct: 238 GKKKKPSKSVEKDADTKALEGDLSANLGMTVRLDHKPGQEKGQMTITYETLDQLDTLCRM 297
Query: 293 LGEND 297
L D
Sbjct: 298 LSTGD 302
>gi|319780616|ref|YP_004140092.1| parB-like partition protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166504|gb|ADV10042.1| parB-like partition protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 296
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 138/298 (46%), Positives = 191/298 (64%), Gaps = 7/298 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS + S++RLGRGLAALIGE+ D P + + + I + PNP NPR +F
Sbjct: 1 MSEDLSRKRLGRGLAALIGEI----DRPAAPEKPGMSADGKVPIEFLTPNPKNPRRHFGD 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L DL QSI+ HG++QP++ R Y+IIAGERR+RAA+ A LSE+PVIIR V++
Sbjct: 57 AELTDLAQSIREHGVVQPVVARPSPAQAGRYEIIAGERRWRAAQRAGLSEIPVIIREVND 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+++LE+AI+ENVQR DLN +EEALGY+QLI E+GYTQ D+G ++GKSRSHVAN LR+LKL
Sbjct: 117 RTALELAIIENVQRTDLNAVEEALGYQQLIDEHGYTQADLGQVIGKSRSHVANTLRLLKL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE-QDNKKEKRK 237
P +R+M+ +S GHARTLV+ DP LA+ IV + +SVR E L Q K
Sbjct: 177 PDVIRDMLVDGALSAGHARTLVTAEDPAGLAKRIVEEGLSVRQAEALAQIPAGTSSTKEA 236
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
K +K+ LEK ++ +G+ +S+ H+ G + Y + EQL +C L +
Sbjct: 237 KPAPSPEQKDADTLALEKLLTDTIGMIVSVDHKGKGGTLRVSYRSLEQLDELCRRLKQ 294
>gi|319404908|emb|CBI78509.1| chromosome partitioning protein ParB [Bartonella rochalimae ATCC
BAA-1498]
Length = 302
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 141/306 (46%), Positives = 197/306 (64%), Gaps = 15/306 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP---------EKKTETIPESQDCISIHSIVPNP 51
MS++ SK+RLGRGLAALIGE+N + + K + S+ + I I NP
Sbjct: 1 MSDDQSKKRLGRGLAALIGEINLNGNPAYSASFDKFTSKPSVAPIASEKFVPIEFISRNP 60
Query: 52 HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEV 109
+NPR F L+DL QSI+ HGIIQP+IVR +++IAGERR+RAA+ A+L++V
Sbjct: 61 NNPRRQFTDSELDDLVQSIRQHGIIQPIIVRPSRTHPNQFQLIAGERRWRAAQRANLNQV 120
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
PVIIR+VD+K++LE+AI+ENVQR DLNP+EE +GYE L++E+GYTQ D+ I+GKSRSHV
Sbjct: 121 PVIIRDVDDKTALELAIIENVQRTDLNPIEEGIGYELLLNEHGYTQADLAEIIGKSRSHV 180
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
N LR+LKLP V++ + IS GHAR L++ +P LA+ I+ + +SVR TE L QE
Sbjct: 181 TNTLRLLKLPQKVQQFLIDGHISAGHARCLITVENPQELAEKIIHEGLSVRQTEILAQEY 240
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
N K K++ + K+ LEK ++ +G+ + I+H G I Y + EQL I
Sbjct: 241 GNSKIKKQTLVR----KDMETQSLEKLLTDVIGMKVIIRHGKKGGNLKIHYSSLEQLDDI 296
Query: 290 CSLLGE 295
C L
Sbjct: 297 CRRLQN 302
>gi|58580127|ref|YP_199143.1| chromosome partitioning protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84622128|ref|YP_449500.1| chromosome partitioning protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188578888|ref|YP_001915817.1| chromosome partitioning protein [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58424721|gb|AAW73758.1| chromosome partitioning protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84366068|dbj|BAE67226.1| chromosome partitioning protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188523340|gb|ACD61285.1| chromosome partitioning protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 309
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 167/304 (54%), Gaps = 11/304 (3%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNP 54
M+ KR LGRGL AL+G + + + +S + + + P + P
Sbjct: 1 MNKPMPAKKRGLGRGLEALLGPKGAAAAAAPSAASEDALQPGDSLRQLPVTQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L +SIK+ G+IQP++ RA+ G ++I+AGERR+RA+++A L+EVPV++R
Sbjct: 61 RREMDEVKLSELAESIKAQGVIQPIVARALAPGQFEIVAGERRWRASQLAGLTEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR
Sbjct: 121 ELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAGAVGRSRASVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD-- 230
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q+
Sbjct: 181 LLELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAG 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+K + + LE ++S +G + H KG+ I Y + L +
Sbjct: 241 KVPSALRKGKPAPVAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|126463647|ref|YP_001044761.1| parB-like partition proteins [Rhodobacter sphaeroides ATCC 17029]
gi|126105311|gb|ABN77989.1| chromosome segregation DNA-binding protein [Rhodobacter sphaeroides
ATCC 17029]
Length = 296
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 115/293 (39%), Positives = 183/293 (62%), Gaps = 8/293 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+R LGRGL+AL+ ++ +D+ + + + +VPNP+ PR F E LE
Sbjct: 1 MERRGLGRGLSALMADIQVEVDAGQGAARRPD---LLVPVEKLVPNPNQPRRDFGPEALE 57
Query: 65 DLCQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
DL SI+ G+IQPLIVR + + Y+I+AGERR+RA+++A L EVPVI+R D+ LE
Sbjct: 58 DLAASIRQKGVIQPLIVRPMPDGDRYEIVAGERRWRASQLAQLHEVPVIVREFDDTEVLE 117
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+AI+EN+QR DLN +EEA+GY QL+ +G+TQ + + +SRSH+AN+LR+L+LP V+
Sbjct: 118 VAIIENIQRADLNAIEEAMGYRQLMDRFGHTQEKLAEALSRSRSHIANLLRLLQLPDDVQ 177
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+R+ +++ GHAR L++T + LA+ ++S+ +SVRDTE L + +++ G
Sbjct: 178 AWLREGKLTAGHARALITTPNASDLARQVISRNLSVRDTERLARGAGE--KRKPSAPRGG 235
Query: 244 REKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLG 294
REK+ LE +S+ + + ++I H G+ I+Y T + L +C L
Sbjct: 236 REKDADTRALEADLSANLKMAVTIDHEPGGESGRLTIRYNTLDDLDTLCRTLS 288
>gi|308071634|ref|YP_003873239.1| stage 0 sporulation protein J [Paenibacillus polymyxa E681]
gi|305860913|gb|ADM72701.1| Stage 0 sporulation protein J [Paenibacillus polymyxa E681]
Length = 280
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 101/289 (34%), Positives = 171/289 (59%), Gaps = 15/289 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLG+GL ALI + + + + I + + NP+ PR F+ E +++L
Sbjct: 3 KRLGKGLDALIPSLTVNEE----------DKVVDIPLSQLRANPYQPRKTFDEESIKELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI+ HG+IQP+I R++ Y+IIAGERRFRA++ +PV++RN ++ +EIA++
Sbjct: 53 ESIRQHGVIQPIIARSV-LRGYEIIAGERRFRASQFCGNPTIPVVVRNFTDQQVMEIALI 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR++LN +E A+ Y+ L+ ++ TQ ++ VGKSRSH+AN LR+L LP V++ +
Sbjct: 112 ENLQRENLNAMEVAVAYQGLMDQFSLTQEELSMKVGKSRSHIANFLRLLALPEEVKDHVS 171
Query: 188 KEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ +S+GHAR + LAQ + ++ SVR+ EE VQ+ D K K R
Sbjct: 172 RGTLSMGHARAIVGLKDPDMVKQLAQQCIEQQWSVRELEEAVQQLD-HKPGEAKAKTKVR 230
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ Y+ +E+ + + + IKH +KG+ + Y + + L+ + LL
Sbjct: 231 KKDPYIDHMEESLRERFKTTVKIKHNKDKGKIELNYYSQQDLERLLELL 279
>gi|118591437|ref|ZP_01548835.1| chromosome partitioning protein, ParB [Stappia aggregata IAM 12614]
gi|118436109|gb|EAV42752.1| chromosome partitioning protein, ParB [Stappia aggregata IAM 12614]
Length = 301
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 131/300 (43%), Positives = 196/300 (65%), Gaps = 9/300 (3%)
Query: 1 MSN-NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + +RLGRGLAALIG+ +P E I + I + PNP NPR F
Sbjct: 1 MAERDVKNKRLGRGLAALIGDSAPEAAAP---PEKIIRDSRRVPIEHLEPNPRNPRKTFT 57
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ L DL +S+K+ GI+QP++VR ++IIAGERR+RAA+ A L E P+IIR+V
Sbjct: 58 EKDLADLSESLKAKGIVQPILVRPAAGKANRFEIIAGERRWRAAQRAGLHEAPIIIRDVT 117
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ +LE+AI+ENVQR DLNP+EEA+GYEQL +E+ Y+Q ++ ++GKSRSHVAN +R+LK
Sbjct: 118 DQEALELAIIENVQRADLNPIEEAMGYEQLTAEFSYSQGELAKVIGKSRSHVANTMRLLK 177
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP+SV++ + + ++ GHAR L++ DP +LA++IV K ++VRD E+L Q+ D +
Sbjct: 178 LPNSVKDYLAEGLLTAGHARALITVEDPAALAELIVEKGLTVRDAEKLSQDPDALAKITG 237
Query: 238 KIFEG-SREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLLG 294
K G +K+ LEK+++ +GL +++ H+ K G IKY + EQL +C LG
Sbjct: 238 KKTPGDKPQKDADTKALEKRLTDTLGLKVTVGHKPGKETGDLKIKYTSLEQLDELCKKLG 297
>gi|83649682|ref|YP_438117.1| transcriptional regulator [Hahella chejuensis KCTC 2396]
gi|83637725|gb|ABC33692.1| predicted transcriptional regulator [Hahella chejuensis KCTC 2396]
Length = 291
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 89/292 (30%), Positives = 163/292 (55%), Gaps = 3/292 (1%)
Query: 5 YSKRRLG-RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
KR LG RGL AL+ + E+ + + + I + PR + E L
Sbjct: 1 MKKRGLGDRGLNALLAGSRTRTNEEEENVKQ-DGVLKELPVELIQRGQYQPRRDMDPESL 59
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L QSI+ G++QP++VR I Y+IIAGERR+RA ++A ++PVIIR+V +++++
Sbjct: 60 EELAQSIRQQGVMQPIVVREISPNRYEIIAGERRWRATQIAGKDKIPVIIRDVPDEAAIA 119
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+A++EN+QR++LNP+EEA+ ++L E+ Q + VGKSR +AN+LR+L L + V+
Sbjct: 120 MALIENIQRENLNPIEEAMALQRLQDEFRLNQTQVAEAVGKSRPAIANLLRLLALHADVK 179
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
M+ + ++ +GHAR L+ + LA + + + + +EK +
Sbjct: 180 TMLERGDMEMGHARALLPLDESTQLAAANAIVEKGLSVRQTEALVRKLLQEKENPKEKIK 239
Query: 244 REKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + L++ ++ ++G ++I + KG+ IKY + ++L I + +
Sbjct: 240 KVLDADVRKLQESLAERLGSPVTIDYNSKGKGKLVIKYNSLDELDGILAHIN 291
>gi|311746144|ref|ZP_07719929.1| spoOJ protein [Algoriphagus sp. PR1]
gi|126576365|gb|EAZ80643.1| spoOJ protein [Algoriphagus sp. PR1]
Length = 303
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 107/300 (35%), Positives = 179/300 (59%), Gaps = 7/300 (2%)
Query: 1 MSNNY---SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
MS+N K LGRGL AL+ + S E E + I + I NP PR +
Sbjct: 1 MSDNKPNRKKSALGRGLGALLEDSPAKHKSEEILPEVVKTGIFEIPLEEIQVNPFQPRVH 60
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
F+ + L +L +SIK GIIQP+ VR +D Y++I+GERRF+A+K+A L+++P +R +
Sbjct: 61 FDKDALGELAESIKVQGIIQPITVRKLDTNEYQLISGERRFQASKIAGLTQIPAYVRTAN 120
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ LE+A++EN+QR++LN LE A Y++L++E Q +G VGK+R+ V N LR+LK
Sbjct: 121 DQQMLEMALIENIQRENLNALEIAHSYQRLLAECDLKQEQLGDRVGKNRTTVNNYLRLLK 180
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV---SKKMSVRDTEELVQEQDNKKE 234
LP +++ IR ++IS+GHAR L++ D + +++SVR E LV+ + K
Sbjct: 181 LPPTIQAAIRDQQISMGHARALINVEDVDKQLAIFKKAVEEELSVRKVEALVKALNEGKP 240
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
++K + K+ ++ ++++++S G +S+K + NKG+ I + +N L I +L
Sbjct: 241 EKKTEPDLDPVKKYEISKIQQRLASHFGTKVSLKSDKKNKGEIKIPFNSNSDLNRILEIL 300
>gi|258543704|ref|YP_003189137.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-01]
gi|256634782|dbj|BAI00758.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-01]
gi|256637838|dbj|BAI03807.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-03]
gi|256640892|dbj|BAI06854.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-07]
gi|256643947|dbj|BAI09902.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-22]
gi|256647002|dbj|BAI12950.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-26]
gi|256650055|dbj|BAI15996.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-32]
gi|256653045|dbj|BAI18979.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656099|dbj|BAI22026.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-12]
Length = 307
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 115/299 (38%), Positives = 186/299 (62%), Gaps = 7/299 (2%)
Query: 3 NNYSKRRLGRGLAALIGE---VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
+ ++ +LGRGLAAL+G+ V++ SP K + + + + P+P PR E
Sbjct: 8 KSSARPKLGRGLAALLGDAAPVDEPASSPNKSASKAAPTASSLPVEVLAPSPFQPRQDME 67
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L++L +SI+ GI+QP++VR + Y+IIAGERR+RAA++A EVPV +RN+
Sbjct: 68 PEALQELAESIRERGILQPILVRPDPDKAGHYQIIAGERRWRAAQLAQCHEVPVHVRNLS 127
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ A+VEN+QR DLNP+EEA G+ +L+ EY TQ+++ +GKSR HVAN LR+L+
Sbjct: 128 EADAMAAALVENLQRADLNPVEEAEGFSRLMEEYSLTQDELAKAIGKSRPHVANTLRLLR 187
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK-KEKR 236
LP VR+ ++K +S GHAR L++ DP+ A ++SK +SVR TE LVQ+ + K +
Sbjct: 188 LPDVVRQELKKGTLSAGHARALLAHPDPIHAAAEVISKGLSVRQTEALVQKALEQAKNTK 247
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQLKIICSLLG 294
+ E K+ ++ LE+ + +++GL + + K G I Y++ +QL + ++L
Sbjct: 248 VEPKEPKVMKDPEISALERDLGTRLGLKVQVHFDGRKGGSLQIHYKSLDQLDAVLAMLK 306
>gi|69247498|ref|ZP_00604368.1| ParB-like partition protein [Enterococcus faecium DO]
gi|257878636|ref|ZP_05658289.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,230,933]
gi|257881302|ref|ZP_05660955.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,231,502]
gi|257890519|ref|ZP_05670172.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,231,410]
gi|257893095|ref|ZP_05672748.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,231,408]
gi|258615280|ref|ZP_05713050.1| ParB family chromosome partitioning protein [Enterococcus faecium
DO]
gi|260558217|ref|ZP_05830413.1| chromosome partitioning protein ParB family [Enterococcus faecium
C68]
gi|293553537|ref|ZP_06674164.1| ParB-like partition protein [Enterococcus faecium E1039]
gi|293563241|ref|ZP_06677693.1| ParB-like partition protein [Enterococcus faecium E1162]
gi|293569169|ref|ZP_06680475.1| ParB-like partition protein [Enterococcus faecium E1071]
gi|294619735|ref|ZP_06699140.1| ParB-like partition protein [Enterococcus faecium E1679]
gi|294623749|ref|ZP_06702577.1| ParB-like partition protein [Enterococcus faecium U0317]
gi|314940141|ref|ZP_07847321.1| ParB-like partition protein [Enterococcus faecium TX0133a04]
gi|314943028|ref|ZP_07849832.1| ParB-like partition protein [Enterococcus faecium TX0133C]
gi|314948146|ref|ZP_07851542.1| ParB-like partition protein [Enterococcus faecium TX0082]
gi|314953440|ref|ZP_07856358.1| ParB-like partition protein [Enterococcus faecium TX0133A]
gi|314993821|ref|ZP_07859157.1| ParB-like partition protein [Enterococcus faecium TX0133B]
gi|314998154|ref|ZP_07863036.1| ParB-like partition protein [Enterococcus faecium TX0133a01]
gi|68194823|gb|EAN09298.1| ParB-like partition protein [Enterococcus faecium DO]
gi|257812864|gb|EEV41622.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,230,933]
gi|257816960|gb|EEV44288.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,231,502]
gi|257826879|gb|EEV53505.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,231,410]
gi|257829474|gb|EEV56081.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,231,408]
gi|260075391|gb|EEW63697.1| chromosome partitioning protein ParB family [Enterococcus faecium
C68]
gi|291588138|gb|EFF19980.1| ParB-like partition protein [Enterococcus faecium E1071]
gi|291594005|gb|EFF25474.1| ParB-like partition protein [Enterococcus faecium E1679]
gi|291596703|gb|EFF27926.1| ParB-like partition protein [Enterococcus faecium U0317]
gi|291602292|gb|EFF32517.1| ParB-like partition protein [Enterococcus faecium E1039]
gi|291604780|gb|EFF34262.1| ParB-like partition protein [Enterococcus faecium E1162]
gi|313587866|gb|EFR66711.1| ParB-like partition protein [Enterococcus faecium TX0133a01]
gi|313591712|gb|EFR70557.1| ParB-like partition protein [Enterococcus faecium TX0133B]
gi|313594543|gb|EFR73388.1| ParB-like partition protein [Enterococcus faecium TX0133A]
gi|313598228|gb|EFR77073.1| ParB-like partition protein [Enterococcus faecium TX0133C]
gi|313640646|gb|EFS05226.1| ParB-like partition protein [Enterococcus faecium TX0133a04]
gi|313645400|gb|EFS09980.1| ParB-like partition protein [Enterococcus faecium TX0082]
Length = 296
Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 107/294 (36%), Positives = 180/294 (61%), Gaps = 9/294 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRG+ AL ++ + + ++ + ++ + PNP+ PR FE L+
Sbjct: 2 KKSKGLGRGIDALFQDLENL-----ETVDVKDDTVVQLPLNELRPNPYQPRKTFEEVSLQ 56
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ G+ QP+IVR Y+IIAGERRFRA+K+A +P I+R+ D ++ +++
Sbjct: 57 ELANSIEQSGVFQPIIVRRSAVKGYEIIAGERRFRASKLAEKETIPAIVRDFDEEAMMQV 116
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNPLEEA YE L+ TQ ++ S +GKSR ++AN LR+L LP V+E
Sbjct: 117 AVLENLQREDLNPLEEAEAYEMLMKNLKLTQAEVASRLGKSRPYIANYLRLLSLPDLVKE 176
Query: 185 MIRKEEISLGHARTLVSTSDPL---SLAQVIVSKKMSVRDTEELVQEQD-NKKEKRKKIF 240
M++ + +S+G ARTL+ + LA V++ ++VR E+LV E + N +++KKI
Sbjct: 177 MVQDQRLSMGQARTLLGLKNKTLILKLANRAVTENLTVRQLEQLVSELNQNDGKEKKKIP 236
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
++EK Y+ + E ++ K G +++I+ +N KG+ I+Y + + L I +L
Sbjct: 237 RLAKEKPYYIRESEDRLMDKFGTSVAIQEKNGKGKIEIEYLSQKDLTRILDILN 290
>gi|302393068|ref|YP_003828888.1| chromosome segregation DNA-binding protein [Acetohalobium
arabaticum DSM 5501]
gi|302205145|gb|ADL13823.1| chromosome segregation DNA-binding protein [Acetohalobium
arabaticum DSM 5501]
Length = 287
Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 107/292 (36%), Positives = 190/292 (65%), Gaps = 10/292 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SK+RLG+GL ALI + N D+ + S +++ I PNP+ PRN F E L+
Sbjct: 1 MSKKRLGKGLGALISDQNPQEDTAK-------NSIQKVNVDKIDPNPYQPRNEFNQERLK 53
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SI+ HG++QP+ +R+ ++G Y++IAGERR+RAAK+ L E+ II++ + +EI
Sbjct: 54 ELSRSIQKHGLLQPITLRSKEDGSYQLIAGERRWRAAKLGGLDEIAAIIQDCSQQQMMEI 113
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DL+P+EEA Y +LI+++ TQ + VGKSRS +AN LR+L L +++
Sbjct: 114 ALIENLQREDLDPIEEAKAYNKLIAKFDLTQAKVAESVGKSRSAIANSLRLLNLAPEIQK 173
Query: 185 MIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ +E +++GHAR L+ ++++ +A+ ++ +SVR+TE+LV+ K++K +K +
Sbjct: 174 YVSRETLTVGHARALLALETSAEQKEVAKEVIENSLSVRETEKLVKNLTTKEKKNQKKKK 233
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
S+ ++ + +E ++ +G +S+K +KGQ I+Y ++E+L + L
Sbjct: 234 ESKRRDPNIAAIEDRLRKSLGTEVSVKEGKDKGQIVIEYYSDEELARLLEFL 285
>gi|117929361|ref|YP_873912.1| chromosome segregation DNA-binding protein [Acidothermus
cellulolyticus 11B]
gi|117649824|gb|ABK53926.1| chromosome segregation DNA-binding protein [Acidothermus
cellulolyticus 11B]
Length = 321
Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 98/294 (33%), Positives = 163/294 (55%), Gaps = 6/294 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD--CISIHSIVPNPHNPRNYFESEG 62
++R LGRGL ALI S + I + I PNP PR F+
Sbjct: 14 TTRRGLGRGLGALIPGGTYESQSDGDRHLAPVAGVRLAEIPVDEIRPNPRQPRQIFDETS 73
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L +L QS++ G +QP++VR D+G Y+++ GERR+RAA A L +P I+R + + L
Sbjct: 74 LAELAQSLREVGFLQPVVVRPHDHG-YELVTGERRWRAAMQAGLDRIPAIVRETSDDAML 132
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
A++EN+ R+ LNPLEEA Y QL+ ++G T ++ +G+SRS V N +R+L LP SV
Sbjct: 133 RDALLENLHREQLNPLEEAAAYAQLLEDFGVTHEELARRIGRSRSQVTNTIRLLNLPPSV 192
Query: 183 REMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ + ++ GHAR L++ +D LAQ IV++ +SVR EELV D K+ R +
Sbjct: 193 QRKVAAGVLTAGHARALLALNDATAQEELAQRIVAEGLSVRAVEELVALGDATKQPRSRT 252
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +++L ++S ++ + + ++G+ I++ + + L+ I ++
Sbjct: 253 RRVASPIAPAVSELAHRLSDQLETRVKVTMGKHRGKITIEFASVDDLERIVGVI 306
>gi|86131722|ref|ZP_01050319.1| chromosome partitioning protein parB [Dokdonia donghaensis MED134]
gi|85817544|gb|EAQ38718.1| chromosome partitioning protein parB [Dokdonia donghaensis MED134]
Length = 299
Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 150/296 (50%), Gaps = 2/296 (0%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE-KKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I+S E K + + + + + I NP PR F
Sbjct: 1 MAKATKKQALGRGLSALLKDPANDINSAEDKNADKVVGNIVELDLEDIDVNPFQPRTSFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SIK G+IQP+ VR I G Y++++GERR+RA+K+ VP IR ++
Sbjct: 61 EETLRELASSIKELGVIQPITVRKISFGKYQLVSGERRYRASKLIGNKTVPAYIRIANDN 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SL +A+VEN+QR+DL+P+E AL Y++LI E TQ + VGK+RS + N LR+LKL
Sbjct: 121 ESLTMALVENIQRQDLDPIEIALSYQRLIDEINLTQEQMSDRVGKNRSTITNYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+ +R +S+GH R L++ + + + N
Sbjct: 181 PIVQTGMRDGFLSMGHGRALINVENTGDQLDIYEKILQEKLSVRQTEALVKNYHATANIE 240
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
E K++ K + G + IK +N +G+ I + + E + L+
Sbjct: 241 TPAKEETPKFIKKGTKDFAEYFGAKVDIKVSKNGRGKITIPFSSEEDFSRLQKLIK 296
>gi|326804286|ref|YP_004322104.1| stage 0 sporulation protein J [Aerococcus urinae ACS-120-V-Col10a]
gi|326650251|gb|AEA00434.1| stage 0 sporulation protein J [Aerococcus urinae ACS-120-V-Col10a]
Length = 321
Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 107/314 (34%), Positives = 167/314 (53%), Gaps = 23/314 (7%)
Query: 3 NNYSKRRLGRGLAALIG--------------------EVNQSIDSPEKKTETIPESQDCI 42
N R LG+G+ AL E ++ S E+ + I
Sbjct: 2 TNKKNRGLGKGIGALFPGDSFDNEATDLTQQAQAIDQEAQEAEASESGPGESHKDQVQEI 61
Query: 43 SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAK 102
+ I PNP+ PR F+ L++L SI+ G++QP+ +R Y+IIAGERRFRA K
Sbjct: 62 PLDEIRPNPYQPRTEFDPSALQELADSIEEQGLLQPITLRKSAIKGYEIIAGERRFRAMK 121
Query: 103 MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
+A +P ++R + + +E AI+EN+QR+DL PLEEA Y L+ E TQ + +
Sbjct: 122 LAGYDTIPALVREMTDAQMIETAIIENLQREDLTPLEEAQAYRNLMDELDLTQAEAAKRL 181
Query: 163 GKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSV 219
GKSRSH+AN LR+L L V+E+++ +++S+G ART L + D LA+ +V + ++V
Sbjct: 182 GKSRSHLANTLRLLDLNEDVKELLQNQKLSMGQARTLLGLKNKKDQSRLAKKVVDEGITV 241
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
R E++VQ + + K+ EK YL + E+ + K G N+ IK + G+ I+
Sbjct: 242 RHLEKMVQNLNEPVQPAPKVANNKAEKPTYLLEGEEHLMDKFGTNVQIKPKGQAGKIEIE 301
Query: 280 YETNEQLKIICSLL 293
Y + E L I +L
Sbjct: 302 YLSQEDLTRILDIL 315
>gi|294666109|ref|ZP_06731367.1| chromosome partitioning protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292604123|gb|EFF47516.1| chromosome partitioning protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 309
Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 95/304 (31%), Positives = 166/304 (54%), Gaps = 11/304 (3%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQS----IDSPEKKTETIPESQDCISIHSIVPNPHNP 54
M+ KR LGRGL AL+G + + ++ +S + + + P + P
Sbjct: 1 MNKPIPAKKRGLGRGLEALLGPKGAAAAAAPGTASEEALQPGDSLRQLPVAELQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L +SIK+ G+IQP++ R + ++I+AGERR+RA+++A L+EVPV++R
Sbjct: 61 RREMDEIKLAELAESIKAQGVIQPIVARELAPAQFEIVAGERRWRASQLAGLTEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR
Sbjct: 121 ELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAGAVGRSRASVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD-- 230
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q+
Sbjct: 181 LLELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAG 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+K + + LE ++S +G + H KG+ I Y + L +
Sbjct: 241 KVPGSLRKGKPAPVAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|148555758|ref|YP_001263340.1| chromosome segregation DNA-binding protein [Sphingomonas wittichii
RW1]
gi|148500948|gb|ABQ69202.1| chromosome segregation DNA-binding protein [Sphingomonas wittichii
RW1]
Length = 298
Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 121/296 (40%), Positives = 188/296 (63%), Gaps = 4/296 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS + +R LGRGL++L+GEV + + P P I I I PNP PR +F+
Sbjct: 1 MSADGPRRGLGRGLSSLLGEV--ATEQPIAPGAERPSGIRMIQIADIKPNPSQPRRHFDD 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L SI + G+IQP++VR + Y+IIAGERR+RAA+ A + E+P I+R + +
Sbjct: 59 TALDELAASIGARGLIQPIVVRPHPSAGGYQIIAGERRWRAAQRARIHELPAIVRELSDA 118
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+LE+AIVENVQR+DLN +EEA Y++LIS++G+TQ +G +VGKSRSHVAN++R+L LP
Sbjct: 119 QTLELAIVENVQRQDLNAIEEAEAYQRLISDFGHTQEVLGKLVGKSRSHVANLMRLLDLP 178
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQ-EQDNKKEKRKK 238
VR+M+ +S+GHAR LV+ + LA+ +V++++SVRD E+L Q + +
Sbjct: 179 KPVRDMVADGRLSMGHARALVTAPNAEELAEQVVTQQLSVRDAEKLAQAGRPGGTAPKPA 238
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
++ + + LE+ + +GL ++I+H G+ I Y T +QL ++C L
Sbjct: 239 APRPAQPADADIAALERHLGDILGLKVTIEHGEKGGRIGIAYSTLDQLDLVCQRLS 294
>gi|163869375|ref|YP_001610631.1| chromosome partitioning protein ParB [Bartonella tribocorum CIP
105476]
gi|161019078|emb|CAK02636.1| chromosome partitioning protein ParB [Bartonella tribocorum CIP
105476]
Length = 298
Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 139/302 (46%), Positives = 200/302 (66%), Gaps = 11/302 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVN-----QSIDSPEKKTETIPESQDCISIHSIVPNPHNPR 55
M+++ SK+RLGRGLAALIG++N S +K TE+ S+ +S+ +I NPHNPR
Sbjct: 1 MNDDLSKKRLGRGLAALIGDINLNNNLARSSSFDKLTESGSISERFVSLEAISCNPHNPR 60
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVII 113
+F L++L QSI HG++QP++VR +++IAGERR+RAAK A+LS++PVII
Sbjct: 61 RHFTEIELDNLAQSICQHGVVQPVVVRPLKDHPHRFELIAGERRWRAAKRANLSQLPVII 120
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
R+VD+K++LE+AI+ENVQR DLNP+EEA GYE L++E+ YTQ D+ ++GKSRSHVAN L
Sbjct: 121 RDVDDKTALELAIIENVQRADLNPIEEAKGYEMLLNEHDYTQVDLAQVIGKSRSHVANTL 180
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
R+LKLP V++ + ++S GHAR L++ +P LA+ I+ + +SVR TE L EQ N
Sbjct: 181 RLLKLPEKVQQFLMDGQLSAGHARCLITVDNPQDLAEKIIREGLSVRQTEILAYEQAN-- 238
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + EK+ LEK ++ +G+ + I+H G I Y + EQL IC L
Sbjct: 239 --PKTKKRTTIEKDAETKSLEKLLADVIGMKVIIRHGKKGGDLKIHYSSLEQLDEICRRL 296
Query: 294 GE 295
Sbjct: 297 QS 298
>gi|78043063|ref|YP_358882.1| stage 0 sporulation protein J [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995178|gb|ABB14077.1| stage 0 sporulation protein J [Carboxydothermus hydrogenoformans
Z-2901]
Length = 286
Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 106/293 (36%), Positives = 178/293 (60%), Gaps = 15/293 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K+ LGRGL ALI E +++ I++ IVPNP PR F E L+
Sbjct: 2 KNKKGLGRGLNALIPEGKINLERE--------NGLVEINVEKIVPNPKQPRTIFSEEALK 53
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SI+ HG++QP++VR I Y+++AGERR+RAA++A L ++P ++++ ++ + +
Sbjct: 54 ELAESIQKHGVLQPIVVRKIAEDKYELVAGERRWRAAQLAGLKQIPAVVKDFSDEEATVV 113
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNPLE+A ++LI E+G TQ ++ + KSR++V N+LR+L LP ++E
Sbjct: 114 ALMENLQREDLNPLEQAKALKRLIEEFGLTQEEVAENLAKSRTYVTNLLRLLNLPPVIQE 173
Query: 185 MIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
M+ K E++ GHARTL+ +A+ I+ + +SVR TEELV++ N E
Sbjct: 174 MVEKGELTYGHARTLLALDDPLKMSEVAREIIKEGLSVRATEELVKKIKNSPEV---KVR 230
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
R+ + ++E K+ + + IK +G+ I+Y + E+L+ I LL
Sbjct: 231 TKRQVAPEIQEIEDKLRAFFATKVEIKSTAKGRGKITIEYYSPEELQRILDLL 283
>gi|114571499|ref|YP_758179.1| chromosome segregation DNA-binding protein [Maricaulis maris MCS10]
gi|114341961|gb|ABI67241.1| chromosome segregation DNA-binding protein [Maricaulis maris MCS10]
Length = 306
Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 122/303 (40%), Positives = 178/303 (58%), Gaps = 7/303 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP-----ESQDCISIHSIVPNPHNPR 55
MS + +RLGRGL+AL+GE + S + I I I PNP PR
Sbjct: 1 MSASEKNKRLGRGLSALLGETDTEGYSAPDVEAAPASGPSRDGVRMIPIELIAPNPDQPR 60
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIR 114
L L +SI GI+QP++VR +D ++I+AGERR+RAA+ A L EVP ++R
Sbjct: 61 KTITEPELNALAESIADKGIVQPILVRPVDGGDRFQIVAGERRWRAAQRARLHEVPALVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+ ++ +LEI IVENVQR DLNP+EEA Y QLI +G+TQ D+ V KSRSHVAN++R
Sbjct: 121 ELTDRETLEIGIVENVQRADLNPVEEAQAYRQLIDRFGHTQEDVAHAVSKSRSHVANMMR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+L LP+ V + +IS GHAR + + DP +L + I+++ +SVRD E+L ++ N
Sbjct: 181 LLALPNPVLAHLASGQISAGHARAIANAPDPEALCEQIIARGLSVRDAEKLARDAQNPPA 240
Query: 235 KRKKIF-EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + K+ LE I++++GL + IKH N G+ ++Y+T EQL +C L
Sbjct: 241 PEIKTGGREAGSKDADTRALEADITARLGLAVEIKHGNKGGELRVQYKTLEQLDDVCRRL 300
Query: 294 GEN 296
+
Sbjct: 301 SAD 303
>gi|166713821|ref|ZP_02245028.1| chromosome partitioning protein [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 309
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 167/304 (54%), Gaps = 11/304 (3%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNP 54
M+ KR LGRGL AL+G + + + +S + + + P + P
Sbjct: 1 MNKPMPAKKRGLGRGLEALLGPKGAAAAAAPSAASEDALQPGDSLRQLPVTQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L +SIK+ G+IQP++ RA+ G ++I+AGERR+RA+++A L+EVPV++R
Sbjct: 61 RREMDQVKLSELAESIKAQGVIQPIVARALAPGQFEIVAGERRWRASQLAGLTEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR
Sbjct: 121 ELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAGAVGRSRASVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD-- 230
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q+
Sbjct: 181 LLELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAG 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+K + + LE ++S +G + H KG+ I Y + L +
Sbjct: 241 KVPSALRKGKPAPVAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|319409461|emb|CBI83110.1| chromosome partitioning protein ParB [Bartonella schoenbuchensis
R1]
Length = 302
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 132/306 (43%), Positives = 200/306 (65%), Gaps = 15/306 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE---------KKTETIPESQDCISIHSIVPNP 51
M+++ SK+RLGRGLAALIG+V+ + D K S+ +SI I NP
Sbjct: 1 MNDDQSKKRLGRGLAALIGDVSLNNDPAHLLNSARFTMKSNMDSIVSERLVSIELISRNP 60
Query: 52 HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEV 109
+NPR +F LE+L QSI+ HG++QP++VR + +++IAGERR+RAA+ A+L+++
Sbjct: 61 NNPRRHFTDLELENLAQSIRQHGVVQPVLVRPSPHHPGRFELIAGERRWRAAQRANLNQL 120
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
PVIIR+VD+K++LE+AI+EN+QR DLNP+EEA+GYE L++E+GYTQ D+ ++GKSRS+V
Sbjct: 121 PVIIRDVDDKTALELAIIENIQRADLNPIEEAMGYEMLLNEHGYTQADLAQVIGKSRSYV 180
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
N LR+LKLP V++ + ++S GHAR L++ ++P LA+ I+ + +SVR E L EQ
Sbjct: 181 TNTLRLLKLPPEVQKFLIDGQLSAGHARCLITVNNPQDLAEKIIHEGLSVRQAEVLTHEQ 240
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
N K EK+ LEK ++ +G+ ++I+H + G I Y + E+L I
Sbjct: 241 ANPKL----KKRTLMEKDTETKSLEKLLTDMIGMKVAIRHGKDGGDLKIHYSSLEELDDI 296
Query: 290 CSLLGE 295
C L
Sbjct: 297 CRRLQS 302
>gi|71899894|ref|ZP_00682042.1| ParB-like partition protein [Xylella fastidiosa Ann-1]
gi|71730334|gb|EAO32417.1| ParB-like partition protein [Xylella fastidiosa Ann-1]
Length = 310
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 169/304 (55%), Gaps = 11/304 (3%)
Query: 1 MSNNY---SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQ-DCISIHSIVPNPHNPRN 56
M+ KR LGRGL AL+G S P E +P + + P+ + PR
Sbjct: 1 MNKPSLPLKKRGLGRGLEALLGSKGGSSVPPTVAQEQLPGEVLRTLQTTQLQPSKYQPRR 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L +L SIK+ G+IQP+IVR +D +++I+AGERR+RA+++A L+EVPVI+R +
Sbjct: 61 EMSEAKLAELADSIKAQGVIQPIIVRELDVDMFEIVAGERRWRASQLAGLTEVPVIVREL 120
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR+L
Sbjct: 121 DDRTVVAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAEAVGRSRAAVSNLLRLL 180
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+LP +R ++ ++ +GHAR L ++ LA+ + SVR+ E Q+ K
Sbjct: 181 ELPLGIRTLLESHQLEMGHARALLTLTPELAAKLAKEAADQGWSVREVEHRAQQFAAGKV 240
Query: 235 KRKKIFEGSR----EKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKII 289
+ + + + LE ++S ++G ++I H KG+ I Y + L +
Sbjct: 241 PDIRDKKSKSLASAPAQPDIASLETELSERLGTKVAINHGRAGKGKLVIHYTDLDVLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|28199201|ref|NP_779515.1| chromosome partitioning protein [Xylella fastidiosa Temecula1]
gi|182681931|ref|YP_001830091.1| parB-like partition protein [Xylella fastidiosa M23]
gi|32129836|sp|Q87BY1|PARB_XYLFT RecName: Full=Probable chromosome-partitioning protein parB
gi|28057307|gb|AAO29164.1| chromosome partitioning protein [Xylella fastidiosa Temecula1]
gi|182632041|gb|ACB92817.1| parB-like partition protein [Xylella fastidiosa M23]
gi|307578187|gb|ADN62156.1| chromosome partitioning protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 310
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 169/304 (55%), Gaps = 11/304 (3%)
Query: 1 MSNNY---SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQ-DCISIHSIVPNPHNPRN 56
M+ KR LGRGL AL+G S P E +P + + P+ + PR
Sbjct: 1 MNKPSLPLKKRGLGRGLEALLGSKGGSSVPPTVAQEQLPGEVLRTLQTTQLQPSKYQPRR 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L +L SIK+ G+IQP+IVR +D +++I+AGERR+RA+++A L+EVPVI+R +
Sbjct: 61 EMSEAKLAELADSIKAQGVIQPIIVRELDVDMFEIVAGERRWRASQLAGLTEVPVIVREL 120
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR+L
Sbjct: 121 DDRTVVAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAEAVGRSRAAVSNLLRLL 180
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+LP +R ++ ++ +GHAR L ++ LA+ + SVR+ E Q+ K
Sbjct: 181 ELPLGIRTLLESHQLEMGHARALLTLTPELAAKLAKEAADQGWSVREVEHRAQQFAAGKV 240
Query: 235 KRKKIFEGSR----EKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKII 289
+ + + + LE ++S ++G ++I H KG+ I Y + L +
Sbjct: 241 PDIRDKKSKSLASAPAQPDIASLETELSERLGTKVAINHGRTGKGKLVIHYTDLDVLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|254483155|ref|ZP_05096388.1| ParB-like nuclease domain family protein [marine gamma
proteobacterium HTCC2148]
gi|214036526|gb|EEB77200.1| ParB-like nuclease domain family protein [marine gamma
proteobacterium HTCC2148]
Length = 297
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 176/304 (57%), Gaps = 17/304 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPES-------QDCISIHSIVPNPHN 53
MS KR LGRGL AL+G + ++ E T+ E + + I +
Sbjct: 1 MS---KKRSLGRGLDALLGASATASEAAEASESTVSEVAADPDKLLKELPVDLIQRGKYQ 57
Query: 54 PRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVII 113
PR E L++L SIK+ G++QP++VR I + Y+IIAGERR+RA ++A L +P +I
Sbjct: 58 PRRDMVPESLQELADSIKAQGVMQPIVVRPISDRKYEIIAGERRWRATQLAGLDTIPAVI 117
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
R+V +++++ +A++EN+QR+DLNP+EEA ++L E+ TQ ++ VGKSRS VAN+L
Sbjct: 118 RDVPDEAAIAMALIENIQREDLNPIEEAASLQRLQQEFELTQQEVADAVGKSRSTVANLL 177
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDN 231
R++ L VR+++ ++ +GHAR L++ D A +V K MSVR TE +V+
Sbjct: 178 RLMSLQEDVRKLVEHGDLEMGHARALLALEGGDQSHAAGQVVGKAMSVRQTEAMVRSLLA 237
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIIC 290
K++ + ++ + + L+ ++ ++G + I+H KG+ + Y + ++L I
Sbjct: 238 GKDR----PKENKTLDPNIRHLQDDLAQRLGTKVQIQHSAKGKGKLVLNYSSLDELDGIL 293
Query: 291 SLLG 294
+ +
Sbjct: 294 AHIK 297
>gi|315497185|ref|YP_004085989.1| parb-like partition protein [Asticcacaulis excentricus CB 48]
gi|315415197|gb|ADU11838.1| parB-like partition protein [Asticcacaulis excentricus CB 48]
Length = 294
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 112/295 (37%), Positives = 173/295 (58%), Gaps = 9/295 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS +R LGRGL+AL+ + S+ P + P + I + PNP PR +F
Sbjct: 1 MSE--KQRGLGRGLSALLSDNQGSV--PIATNDGKPAATLEKPIELLQPNPDQPRRFFSE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
++DL SIK G++ P++VR + ++IIAGERR+RAA+ A L VPVI+R +D+
Sbjct: 57 AEIDDLSASIKEKGVLSPILVRPLPGQAGQFQIIAGERRWRAAQKAGLKTVPVIVRELDD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
LEI I+ENVQR+DLNP+EEA Y+ L+ +G TQ+ + +V KSRSH+AN++R+L L
Sbjct: 117 LEVLEIGIIENVQREDLNPIEEARAYKVLMERFGRTQDAVAQVVSKSRSHIANMMRLLGL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P +++ + +S GHAR + + S+P +LA+VI+ K +SVR E L + + K
Sbjct: 177 PEGIQDHVIHGRLSAGHARAIATASNPEALAEVIIQKGLSVRQAEMLARTALS---GETK 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + LE+ + +GLN+ + + KG+ I Y + EQL +C L
Sbjct: 234 PARPKAQTNADVLSLEQDLQELLGLNVKLDDKGGKGEVRIAYASLEQLDDVCRRL 288
>gi|292493912|ref|YP_003529351.1| parB-like partition protein [Nitrosococcus halophilus Nc4]
gi|291582507|gb|ADE16964.1| parB-like partition protein [Nitrosococcus halophilus Nc4]
Length = 289
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 97/297 (32%), Positives = 176/297 (59%), Gaps = 11/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+G + ID E K + E + + I + PR
Sbjct: 1 MA--VKKRGLGRGLDALLGAADLPIDIGESKAK---EELRRLPLDQIRLGKYQPRMEICP 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L SI++ GI+QP++VR +G +++IAGERR+RAA+M L E+P ++R+V +++
Sbjct: 56 TALEELADSIRAQGIVQPIVVRPGGSGTFELIAGERRWRAAQMVGLDEIPAVVRDVPDQT 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA ++LI+E+G T + VG+SR+ V+N+LR+L L +
Sbjct: 116 AVAMALIENIQREDLNPIEEANALQRLINEFGITHQEASQAVGRSRAAVSNLLRLLTLEN 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ K ++ +GHAR L +S A+ + + +SVR+TE LV ++
Sbjct: 176 EVKHLVEKGDLEMGHARALLALSDEVQRKAARTVAQQGLSVRETERLV---KRLQQAPPP 232
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ + + L+++++ ++G + ++H + G+ I Y + ++L I + +
Sbjct: 233 RRSKEKSLDPDIRRLQEELAERLGAVVRLQHHPSGSGKLLIHYHSVDELDGILAHIK 289
>gi|114049509|ref|YP_740059.1| chromosome segregation DNA-binding protein [Shewanella sp. MR-7]
gi|113890951|gb|ABI45002.1| chromosome segregation DNA-binding protein [Shewanella sp. MR-7]
Length = 292
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 94/293 (32%), Positives = 175/293 (59%), Gaps = 10/293 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETI--PESQDCISIHSIVPNPHNPRNYFESEGL 63
KR LG+GL AL+ + + ++ + E + + + P + PR E L
Sbjct: 4 KKRGLGKGLDALLSNSHAASKKHTEEVVVVDKKEELIHLDLDLLQPGKYQPRKDMSPEAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SI++ GIIQP++VR + + Y+IIAGERR+RA+++A + ++P I++ V +++++
Sbjct: 64 EELAHSIRNQGIIQPIVVRPVSDSQYEIIAGERRWRASQLAGIEKIPCIVKPVPDEAAVA 123
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR+DLN +EEA+ ++L+ E+ T + +VGKSR+ V+N+LR+ L V+
Sbjct: 124 IALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGLNEPVK 183
Query: 184 EMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ +I +GHAR L + + +LA+++ +K+++VR+TE L+ + N
Sbjct: 184 RLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLN-----PPKPV 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ K++ + LE+++ ++G +SI H KG+ I Y+ +L I S +
Sbjct: 239 ETTTKDQDVCRLEQQLIERLGAKVSIAHSSKGKGKIVINYQNLAELDGILSKI 291
>gi|24376227|ref|NP_720271.1| ParB family protein [Shewanella oneidensis MR-1]
gi|24351287|gb|AAN57714.1|AE015907_12 ParB family protein [Shewanella oneidensis MR-1]
Length = 292
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 94/293 (32%), Positives = 174/293 (59%), Gaps = 10/293 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETI--PESQDCISIHSIVPNPHNPRNYFESEGL 63
KR LG+GL AL+ + + ++ + E + + + P + PR E L
Sbjct: 4 KKRGLGKGLDALLSHSHAANKKQTEEVAVVEKKEELIHLDLDLLQPGKYQPRKDMSPEAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SI++ GIIQP++VR + Y+IIAGERR+RA+++A + ++P I++ V +++++
Sbjct: 64 EELAHSIRNQGIIQPIVVRPVSETQYEIIAGERRWRASQLAGVDKIPCIVKPVPDEAAVA 123
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR+DLN +EEA+ ++L+ E+ T + +VGKSR+ V+N+LR+ L V+
Sbjct: 124 IALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGLNEPVK 183
Query: 184 EMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ +I +GHAR L + + +LA+++ +K+++VR+TE L+ + N
Sbjct: 184 RLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLN-----PPKPV 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ K++ + LE+++ ++G +SI H KG+ I Y+ +L I S +
Sbjct: 239 ETTTKDQDVCRLEQQLIERLGAKVSIAHSSKGKGKIVINYQNLAELDGILSKI 291
>gi|117922569|ref|YP_871761.1| chromosome segregation DNA-binding protein [Shewanella sp. ANA-3]
gi|117614901|gb|ABK50355.1| chromosome segregation DNA-binding protein [Shewanella sp. ANA-3]
Length = 292
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 94/293 (32%), Positives = 175/293 (59%), Gaps = 10/293 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETI--PESQDCISIHSIVPNPHNPRNYFESEGL 63
KR LG+GL AL+ + + ++ + E + + + P + PR E L
Sbjct: 4 KKRGLGKGLDALLSNSHAASKKHTEEVVVVDKKEELIHLDLDLLQPGKYQPRKDMSPEAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SI++ GIIQP++VR + + Y+IIAGERR+RA+++A + ++P I++ V +++++
Sbjct: 64 EELAHSIRNQGIIQPIVVRPVSDSQYEIIAGERRWRASQLAGVEKIPCIVKPVPDEAAVA 123
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR+DLN +EEA+ ++L+ E+ T + +VGKSR+ V+N+LR+ L V+
Sbjct: 124 IALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGLNEPVK 183
Query: 184 EMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ +I +GHAR L + + +LA+++ +K+++VR+TE L+ + N
Sbjct: 184 RLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLN-----PPKPV 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ K++ + LE+++ ++G +SI H KG+ I Y+ +L I S +
Sbjct: 239 ETTTKDQDVCRLEQQLIERLGAKVSIAHSSKGKGKIVINYQNLAELDGILSKI 291
>gi|258507240|ref|YP_003169991.1| ParB-like partition protein [Lactobacillus rhamnosus GG]
gi|257147167|emb|CAR86140.1| ParB-like partition protein [Lactobacillus rhamnosus GG]
gi|259648606|dbj|BAI40768.1| chromosome partitioning protein ParB [Lactobacillus rhamnosus GG]
Length = 290
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 98/297 (32%), Positives = 160/297 (53%), Gaps = 10/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+N SK LGRG+ A+ + E + + + + + I PNP+ PR F+
Sbjct: 1 MANKNSK-GLGRGIDAIFKDF-------ESPDLSANNTVEELPLVDIRPNPYQPRKTFDQ 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
EGL++L SIK G+ QP+IVR Y+II GERRFRA+K+A +P I+R+ ++
Sbjct: 53 EGLKELADSIKQTGVFQPIIVRK-SVSGYEIITGERRFRASKLAGKETIPTIVRDFNDPE 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DL PL+EA Y+ LI TQ ++ + +GKSR ++AN LR+L LP
Sbjct: 112 MMEIAVLENLQREDLTPLDEAQAYDTLIKRLNLTQAEVSARLGKSRPYIANYLRLLTLPQ 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V++M+ ++S+G ARTL+S D + V +L + + +
Sbjct: 172 PVKQMLSANQLSMGQARTLLSLKDKTKMVAVAKKTISENLTVRQLERLINQMNAGTNRPA 231
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ K Y+ E ++ + G ++I KG+ I + + + L I ++L N
Sbjct: 232 TKEKPKSPYVRATENQLGERFGTKVNINEGSKGKGKIEIDFSSEKDLNRILAMLDVN 288
>gi|199597915|ref|ZP_03211340.1| Spo0J-like protein, ParB-like nuclease domain [Lactobacillus
rhamnosus HN001]
gi|229550861|ref|ZP_04439586.1| chromosome partitioning protein, DNA-binding exonuclease
[Lactobacillus rhamnosus LMS2-1]
gi|258538427|ref|YP_003172926.1| ParB-like partition protein [Lactobacillus rhamnosus Lc 705]
gi|199591172|gb|EDY99253.1| Spo0J-like protein, ParB-like nuclease domain [Lactobacillus
rhamnosus HN001]
gi|229315686|gb|EEN81659.1| chromosome partitioning protein, DNA-binding exonuclease
[Lactobacillus rhamnosus LMS2-1]
gi|257150103|emb|CAR89075.1| ParB-like partition protein [Lactobacillus rhamnosus Lc 705]
Length = 290
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 98/297 (32%), Positives = 160/297 (53%), Gaps = 10/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+N SK LGRG+ A+ + E + + + + + I PNP+ PR F+
Sbjct: 1 MANKNSK-GLGRGIDAIFKDF-------ESPDLSANNTVEELPLVDIRPNPYQPRKTFDQ 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
EGL++L SIK G+ QP+IVR Y+II GERRFRA+K+A +P I+R+ ++
Sbjct: 53 EGLKELADSIKQTGVFQPIIVRK-SVSGYEIITGERRFRASKLAGKETIPAIVRDFNDPE 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DL PL+EA Y+ LI TQ ++ + +GKSR ++AN LR+L LP
Sbjct: 112 MMEIAVLENLQREDLTPLDEAQAYDTLIKRLNLTQAEVSARLGKSRPYIANYLRLLTLPQ 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V++M+ ++S+G ARTL+S D + V +L + + +
Sbjct: 172 PVKQMLSANQLSMGQARTLLSLKDKTKMVAVAKKTISENLTVRQLERLINQMNAGTNRPA 231
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ K Y+ E ++ + G ++I KG+ I + + + L I ++L N
Sbjct: 232 TKEKPKSPYVRATENQLGERFGTKVNINEGSKGKGKIEIDFSSEKDLNRILAMLDVN 288
>gi|119776784|ref|YP_929524.1| ParB family protein [Shewanella amazonensis SB2B]
gi|119769284|gb|ABM01855.1| chromosome segregation DNA-binding protein [Shewanella amazonensis
SB2B]
Length = 292
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 101/293 (34%), Positives = 174/293 (59%), Gaps = 10/293 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPES--QDCISIHSIVPNPHNPRNYFESEGL 63
KR LG+GL AL+ + + E++ + + + + P + PR E L
Sbjct: 4 KKRGLGKGLDALLSTSHAASRKLEQEAARADKQDDLVHLDVDLLQPGKYQPRKDMSPEAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L +SI++ GIIQP++VR + Y+IIAGERR+RA+++A L +VP II+ V ++S++
Sbjct: 64 EELAESIRAQGIIQPIVVRKVAEQKYEIIAGERRWRASQLAKLEKVPCIIKQVPDESAVA 123
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR+DLN +EEA+ +L+ E+ T + VGKSR+ V N+LR+ L V+
Sbjct: 124 IALIENIQREDLNAMEEAIALHRLLEEFELTHQQVADAVGKSRTTVTNLLRLNSLNEPVK 183
Query: 184 EMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ +I +GHAR L V + +LA+++ +K+++VR+TE L+ N ++ +K
Sbjct: 184 RLLEYGDIDMGHARALLAVEGEEQTNLARLVAAKELTVRETERLINRTLNPAKEAEKPV- 242
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
K+ ++ LE+++ K+G +SI H KG+ I Y+ +L I S +
Sbjct: 243 ----KDHDVSRLEQQLIEKLGAKVSIAHGSKGKGKIVINYQNLAELDGILSKI 291
>gi|329847390|ref|ZP_08262418.1| chromosome-partitioning protein parB [Asticcacaulis biprosthecum
C19]
gi|328842453|gb|EGF92022.1| chromosome-partitioning protein parB [Asticcacaulis biprosthecum
C19]
Length = 294
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 114/299 (38%), Positives = 177/299 (59%), Gaps = 9/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGE--VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS R LGRGL+AL+G+ V + + P +K+ + I +V NP PR F
Sbjct: 1 MSE--KNRGLGRGLSALLGDPVVVATAEKPVEKSAEAGRNSLEQPIELLVRNPDQPRKVF 58
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNV 116
+E+L SI+ G++QP++VR+ Y+IIAGERR+RAA+ A L VPVI+R +
Sbjct: 59 NDTEVEELSNSIREKGVLQPILVRSAPGQPGKYQIIAGERRWRAAQKAGLHTVPVIVREL 118
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++ LE+ I+ENVQR DLNP+EE+ Y+ L+ +G TQ+ + +VGKSRSH+AN LR+
Sbjct: 119 NDLEVLEVGIIENVQRADLNPIEESRAYKILMERFGRTQDALAQVVGKSRSHIANTLRLS 178
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
LP +V++ + + IS GHARTLV+ +P +LA I+ K +SVR E LV+ ++ +
Sbjct: 179 TLPEAVQDHVLQGRISAGHARTLVTAENPEALAATIIDKGLSVRQAEALVR---DEGKDV 235
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + + LE+ + +GL + + KG+ + Y+T EQL +C L +
Sbjct: 236 VPVVKTKPAVNADVQSLEQDLQEALGLQVKLSDAGGKGELRLTYKTLEQLDELCRKLMK 294
>gi|295691568|ref|YP_003595261.1| parb-like partition protein [Caulobacter segnis ATCC 21756]
gi|295433471|gb|ADG12643.1| parB-like partition protein [Caulobacter segnis ATCC 21756]
Length = 304
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 122/295 (41%), Positives = 174/295 (58%), Gaps = 7/295 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +R LGRGL+AL+GEV + I + NP PR F
Sbjct: 11 MAE--GRRGLGRGLSALLGEVETAPAQAPGDQTA---GSREAPIELLKRNPDQPRRTFRE 65
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E LEDL SI+ G++QP++VR G Y+I+AGERR+RAA+ A L VP+++R +D+
Sbjct: 66 EDLEDLSNSIREKGVLQPILVRPAPGAPGEYQIVAGERRWRAAQRAGLRSVPIMVRELDD 125
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ LEI I+ENVQR DLN LEEAL Y+ L+ ++ TQ+ I +GKSRSHVAN LR+L L
Sbjct: 126 LAVLEIGIIENVQRADLNVLEEALSYKVLMEKFERTQDAIAQTIGKSRSHVANTLRLLAL 185
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+ + E+S GHAR + + +DP++LA+ I+ +SVR+TE L ++ + K
Sbjct: 186 PEEVQSYLVSGELSAGHARAIAAAADPVALAKQIIEGGLSVRETEALARKTPTAPSAKNK 245
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ K+ LE +SS +GL++SI HR G I Y T EQL +C+ L
Sbjct: 246 GGRPPKVKDTDTQALEADLSSVLGLDVSIDHRGAAGSITISYATLEQLDDLCNRL 300
>gi|85375441|ref|YP_459503.1| chromosome partitioning protein [Erythrobacter litoralis HTCC2594]
gi|84788524|gb|ABC64706.1| chromosome partitioning protein [Erythrobacter litoralis HTCC2594]
Length = 330
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 113/312 (36%), Positives = 176/312 (56%), Gaps = 15/312 (4%)
Query: 1 MSNNY-SKRRLGRGLAALIGEV------------NQSIDSPEKKTETIPESQDCISIHSI 47
M + K++LGRGL AL+GE+ ++ + I + SI
Sbjct: 18 MGKSTDKKKKLGRGLGALMGEMRREEPLVQPASDDKDGSGAPQPAVPPNGGLGTIPVSSI 77
Query: 48 VPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLS 107
P P PR++F+ L++L SI + G+IQP+IVR G Y+++AGERR+RAA+ A L
Sbjct: 78 SPLPGQPRSHFDEAALDELAASIAARGVIQPIIVRPDGEGRYQLVAGERRWRAAQKARLH 137
Query: 108 EVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRS 167
++P I+R++D + + +A++EN+QR+DLNP+EEA Y +L + G +Q +I +V KSRS
Sbjct: 138 QIPAIVRDLDQREVMALALIENIQREDLNPIEEARAYHRLSEDEGMSQAEIAKLVDKSRS 197
Query: 168 HVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQ 227
HVAN+ R+L LP V M+ ++S+GHAR L+ + + LA+ VS KMSVRD E+ V+
Sbjct: 198 HVANLQRLLALPDEVIAMVESGDLSMGHARALIGYENAVGLAREAVSNKMSVRDVEKRVR 257
Query: 228 EQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN--NKGQFCIKYETNEQ 285
+ + RK K + ++ + +GL + IK G I+Y T +Q
Sbjct: 258 GETAPSKDRKSGPSSDPVKNADIAAVQNHLEEFLGLPVKIKTDRDPRSGAVTIRYRTLDQ 317
Query: 286 LKIICSLLGEND 297
L +IC L D
Sbjct: 318 LDLICQRLTGGD 329
>gi|254467812|ref|ZP_05081218.1| chromosome segregation DNA-binding protein [beta proteobacterium
KB13]
gi|207086622|gb|EDZ63905.1| chromosome segregation DNA-binding protein [beta proteobacterium
KB13]
Length = 291
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 103/298 (34%), Positives = 176/298 (59%), Gaps = 10/298 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL+AL G + S E + ES + I ++P + PR+
Sbjct: 1 MAKE---KGLGRGLSALFGSEVEEKSSLE---PVVGESIQQVDIDQLIPGRYQPRSVMNE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L +L +SI G++QP+I R +D+G Y+IIAGERR+RAA++A + EVPVI+R + ++S
Sbjct: 55 DALNELAESIAEQGLMQPIIARQLDDG-YEIIAGERRWRAAQIAKIKEVPVIVREISDRS 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L +A++EN+QR+DL+ LEEA G ++I E+ T +GKSR V+N+LR+L L
Sbjct: 114 ALAMALIENIQREDLSALEEANGIRRMIDEFEMTHEQAADALGKSRVTVSNLLRLLNLTP 173
Query: 181 SVREMIRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
VR+ + +++I +GHAR L+ + L + I + +SVR+ E LV +D +
Sbjct: 174 HVRKALAEKKIEMGHARALLPLNPDRQIMLCEKIARESLSVREVEVLVNGEDRSAFAKPS 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGE 295
+ + K+ + +E ++S ++G ++ I + +NN G+ I Y +QL ++ L +
Sbjct: 234 SRKKEQTKDADVQAIENELSDQLGFSVKINNKKNNSGEIRISYRNLDQLDVLIEKLKK 291
>gi|300791158|ref|YP_003771449.1| chromosome partitioning protein ParB [Amycolatopsis mediterranei
U32]
gi|299800672|gb|ADJ51047.1| chromosome partitioning protein ParB [Amycolatopsis mediterranei
U32]
Length = 333
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 100/326 (30%), Positives = 164/326 (50%), Gaps = 32/326 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEV---------------------------NQSIDSPEKKTE 33
M+ + LGRGLAALI + + + E
Sbjct: 1 MTE--RRGGLGRGLAALIPTGPTGGGPLPAPGDTTAADKKAAEDKGWFAANGQAQQHAGE 58
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
I + SI PNP PR F+ E L +L SI++ G++QP++VR + N Y+++
Sbjct: 59 VAGAVYREIPVSSIKPNPKQPRQVFDEEALAELEHSIRAFGLMQPIVVRELGNDEYELVM 118
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR RA++ A L +P I+R ++S L A++EN+ R LNPLEEA Y+QL+ E+
Sbjct: 119 GERRLRASQQAELEAIPAIVRQTADESMLRDALLENIHRVQLNPLEEAAAYQQLLDEFAV 178
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQ 210
T ++ S +G+SR + N +R+LKLP V+ + +S GHAR L+ LA
Sbjct: 179 THEELASRIGRSRPVITNTIRLLKLPLPVQRRVAAGVLSAGHARALLSLEDAESQEELAA 238
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
IV++ MSVR TEE V + ++K + K + L +L ++S + + +
Sbjct: 239 RIVAEGMSVRATEEAVTLKKSEKPAKPKPAPRKPIQAPGLQELANRLSDRFDTRVKVDLG 298
Query: 271 NNKGQFCIKYETNEQLKIICSLLGEN 296
KG+ +++ + + L+ I +++ N
Sbjct: 299 RRKGRITLEFGSVDDLERIVAIIDAN 324
>gi|296114343|ref|ZP_06832997.1| parB-like partition protein [Gluconacetobacter hansenii ATCC 23769]
gi|295979104|gb|EFG85828.1| parB-like partition protein [Gluconacetobacter hansenii ATCC 23769]
Length = 299
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 112/294 (38%), Positives = 182/294 (61%), Gaps = 4/294 (1%)
Query: 3 NNYSKRRLGRGLAALIGE-VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ ++ RLGRGLAAL+G+ VN +P + + + + + P P PR + E
Sbjct: 5 KDAARPRLGRGLAALLGDQVNMLNPAPGLEPRKNMDGGSVLPVDVLEPGPFQPRQHMAPE 64
Query: 62 GLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
LE+L SI++ GI+QP++VR +++IIAGERR+RAA++ASL EVPV IR +D+
Sbjct: 65 ALEELADSIRTRGILQPILVRPHPDRPNMFQIIAGERRWRAAQLASLHEVPVHIRALDDG 124
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++ A+VEN+QR DLN +EEA G ++L+ +Y TQ ++ +GKSR HVAN++R+L+LP
Sbjct: 125 DAMAAALVENLQRADLNAMEEAEGLQRLLDDYRLTQEELAGAIGKSRPHVANMVRLLQLP 184
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
VR+ +R E+S GHAR L++ DP++ +V++ + ++VR TE L ++ D K + K
Sbjct: 185 PPVRDAVRDRELSAGHARALLAHPDPVAALKVVLKQGLNVRQTEALSKKTDAKNKVAAK- 243
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
E K+ + LE+ +++K+GL + I G + Y + +Q + LL
Sbjct: 244 REEQAHKDPEIGSLERDLTAKLGLKVQITFDGKGGSLRVDYRSLDQFDGLLRLL 297
>gi|167626207|ref|YP_001676501.1| parB-like partition protein [Shewanella halifaxensis HAW-EB4]
gi|167356229|gb|ABZ78842.1| parB-like partition protein [Shewanella halifaxensis HAW-EB4]
Length = 296
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 105/297 (35%), Positives = 176/297 (59%), Gaps = 14/297 (4%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPES------QDCISIHSIVPNPHNPRNYFE 59
KR LG+GL AL+ + E T E + I + P + PR
Sbjct: 4 KKRGLGKGLDALLSTSQAANQRAEPTVATEVEQDIRNDDLITLDIDRLQPGKYQPRKDMS 63
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
SE LE+L +SI++ GIIQP++VR I Y+IIAGERR+RA+++A L ++P I++ V ++
Sbjct: 64 SEALEELAESIRAQGIIQPIVVRKISPESYEIIAGERRWRASQLAGLPKIPCIVKQVADE 123
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+++ IA++EN+QR+DLN +EEA+ +LI E+ T I VGKSR+ V+N+LR+ L
Sbjct: 124 AAVAIALIENIQREDLNAMEEAIALNRLIEEFKLTHQQIADAVGKSRATVSNLLRLNGLN 183
Query: 180 SSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M+ +I +GH R L +S + +LA+++V+K+++VR+TE LV + N+ E +
Sbjct: 184 EPVKRMLEYGDIDMGHGRALLAISGDEQTNLARLVVAKELTVRETERLVNKTLNQTEIAE 243
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
K K+ + LE ++ ++G +++ H + KG+ I Y+ +L+ I S +
Sbjct: 244 K-----PAKDHDVVRLETQLIERLGAKVTLTHNKKGKGKVVINYQNLAELEGIISKI 295
>gi|227550627|ref|ZP_03980676.1| stage 0 DNA-binding protein [Enterococcus faecium TX1330]
gi|257888107|ref|ZP_05667760.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,141,733]
gi|257896274|ref|ZP_05675927.1| chromosome partitioning protein ParB family [Enterococcus faecium
Com12]
gi|257899261|ref|ZP_05678914.1| chromosome partitioning protein ParB family [Enterococcus faecium
Com15]
gi|293379355|ref|ZP_06625499.1| ParB-like protein [Enterococcus faecium PC4.1]
gi|293572708|ref|ZP_06683672.1| ParB-like partition protein [Enterococcus faecium E980]
gi|227180228|gb|EEI61200.1| stage 0 DNA-binding protein [Enterococcus faecium TX1330]
gi|257824161|gb|EEV51093.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,141,733]
gi|257832839|gb|EEV59260.1| chromosome partitioning protein ParB family [Enterococcus faecium
Com12]
gi|257837173|gb|EEV62247.1| chromosome partitioning protein ParB family [Enterococcus faecium
Com15]
gi|291607200|gb|EFF36558.1| ParB-like partition protein [Enterococcus faecium E980]
gi|292641878|gb|EFF60044.1| ParB-like protein [Enterococcus faecium PC4.1]
Length = 296
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 106/294 (36%), Positives = 180/294 (61%), Gaps = 9/294 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRG+ AL ++ + + ++ + ++ + PNP+ PR FE L+
Sbjct: 2 KKSKGLGRGIDALFQDLENL-----ETVDVKDDTVVQLPLNELRPNPYQPRKTFEEVSLQ 56
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ G+ QP+IVR Y+IIAGERRFRA+K+A +P I+R+ D ++ +++
Sbjct: 57 ELANSIEQSGVFQPIIVRRSAVKGYEIIAGERRFRASKLAEKETIPAIVRDFDEEAMMQV 116
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNPLEEA YE L+ TQ ++ S +GKSR ++AN LR+L LP V+E
Sbjct: 117 AVLENLQREDLNPLEEAEAYEMLMKNLKLTQAEVASRLGKSRPYIANYLRLLSLPDLVKE 176
Query: 185 MIRKEEISLGHARTLVSTSDPL---SLAQVIVSKKMSVRDTEELVQEQD-NKKEKRKKIF 240
M++ + +S+G ARTL+ + LA V++ ++VR E++V E + N +++KKI
Sbjct: 177 MVQDQRLSMGQARTLLGLKNKSLILKLANRAVTENLTVRQLEQIVSELNQNDGKEKKKIP 236
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
++EK Y+ + E ++ K G +++I+ +N KG+ I+Y + + L I +L
Sbjct: 237 RLAKEKPYYIRESEDRLMDKFGTSVAIQEKNGKGKIEIEYLSQKDLTRILDILN 290
>gi|258512898|ref|YP_003186332.1| parB-like partition protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479624|gb|ACV59943.1| parB-like partition protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 282
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 104/292 (35%), Positives = 171/292 (58%), Gaps = 18/292 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+KR LGRGL ALI ++N S + + I I + PNP+ PR F E L+
Sbjct: 1 MAKRGLGRGLDALIPQLNVSDE----------DQIVQIDIRDLRPNPYQPRRTFNEEKLQ 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+LC SI+ HGI+QPLIVR + I+AGERR+RAAKMA L VP ++R++ + +EI
Sbjct: 51 ELCNSIREHGILQPLIVRRSQVKGFDIVAGERRYRAAKMAGLQVVPAVVRDLSDVLLMEI 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+E A Y +LI + TQ+++ VG+SRSH+ N+LR+L+LP+ +++
Sbjct: 111 ALIENLQREDLNPIEIADAYAKLIEKCHLTQDELAKRVGQSRSHITNMLRLLQLPAQIQD 170
Query: 185 MIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
M+ + +++GHAR L+S D A+ V + SVR E ++ + + K
Sbjct: 171 MVSRGTLTMGHARALLSVEDAEEQLRLAEQTVKEAWSVRKLEMVIYQPKKVSRETDKPAL 230
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++++ + +G ++ I+ +G+ I Y + + L+ I L+
Sbjct: 231 PT-----EYRRYQEQVQAYLGTSVRIQPGKKRGKIEIDYYSEDDLRRIMDLM 277
>gi|329113879|ref|ZP_08242650.1| Putative chromosome-partitioning protein ParB [Acetobacter pomorum
DM001]
gi|326696889|gb|EGE48559.1| Putative chromosome-partitioning protein ParB [Acetobacter pomorum
DM001]
Length = 307
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 113/299 (37%), Positives = 184/299 (61%), Gaps = 7/299 (2%)
Query: 3 NNYSKRRLGRGLAALIGEV---NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
+ ++ +LGRGLAAL+G+V ++ S K + + I + P P PR E
Sbjct: 8 KSSARPKLGRGLAALLGDVASVDEPASSANKSASKAAPTASSLPIEVLAPGPFQPRQDME 67
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L++L +SI+ GI+QP++VR + Y+IIAGERR+RAA++A +VPV +RN+
Sbjct: 68 PEALQELAESIRERGILQPILVRPDPHKTGHYQIIAGERRWRAAQLAQCHDVPVHVRNLS 127
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ A+VEN+QR DLNP+EEA G+ +L+ EY TQ+++ +GKSR HVAN LR+L+
Sbjct: 128 EADAMAAALVENLQRADLNPVEEAEGFSRLMEEYSLTQDELAKAIGKSRPHVANTLRLLR 187
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK-KEKR 236
LP +R+ ++K +S GHAR L++ DP+ A ++SK +SVR TE LVQ+ + K +
Sbjct: 188 LPDVLRQELKKGALSAGHARALLAHPDPIQAAAEVISKGLSVRQTEALVQKALEQAKNTK 247
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQLKIICSLLG 294
+ E K+ ++ LE+ + +++GL + + K G I Y++ +QL + ++L
Sbjct: 248 VETKEPKVMKDPEISALERDLGTRLGLKVHVHFDGRKGGSLQIHYKSLDQLDAVLAMLK 306
>gi|113972260|ref|YP_736053.1| chromosome segregation DNA-binding protein [Shewanella sp. MR-4]
gi|113886944|gb|ABI40996.1| chromosome segregation DNA-binding protein [Shewanella sp. MR-4]
Length = 292
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 94/293 (32%), Positives = 175/293 (59%), Gaps = 10/293 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETI--PESQDCISIHSIVPNPHNPRNYFESEGL 63
KR LG+GL AL+ + + ++ + E + + + P + PR E L
Sbjct: 4 KKRGLGKGLDALLSNSHAASKKHTEEVVVVDKKEELIHLDLDLLQPGKYQPRKDMSPEAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SI++ GIIQP++VR + + Y+IIAGERR+RA+++A + ++P I++ V +++++
Sbjct: 64 EELAHSIRNQGIIQPIVVRPVSDSQYEIIAGERRWRASQLAGIEKIPCIVKPVPDEAAVA 123
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR+DLN +EEA+ ++L+ E+ T + +VGKSR+ V+N+LR+ L V+
Sbjct: 124 IALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGLNEPVK 183
Query: 184 EMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ +I +GHAR L + + +LA+++ +K+++VR+TE L+ + N
Sbjct: 184 RLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLN-----PSKPV 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ K++ + LE+++ ++G +SI H KG+ I Y+ +L I S +
Sbjct: 239 ETTTKDQDVCRLEQQLIERLGAKVSIAHSSKGKGKIVINYQNLAELDGILSKI 291
>gi|218291083|ref|ZP_03495106.1| parB-like partition protein [Alicyclobacillus acidocaldarius LAA1]
gi|218238968|gb|EED06175.1| parB-like partition protein [Alicyclobacillus acidocaldarius LAA1]
Length = 282
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 104/292 (35%), Positives = 171/292 (58%), Gaps = 18/292 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+KR LGRGL ALI ++N S + + I I + PNP+ PR F E L+
Sbjct: 1 MAKRGLGRGLDALIPQLNVSDE----------DQIVQIDIRDLRPNPYQPRRTFNEEKLQ 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+LC SI+ HGI+QPLIVR + I+AGERR+RAAKMA L VP ++R++ + +EI
Sbjct: 51 ELCDSIREHGILQPLIVRKSQVKGFDIVAGERRYRAAKMAGLQVVPAVVRDLSDVLLMEI 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+E A Y +LI + TQ+++ VG+SRSH+ N+LR+L+LP +++
Sbjct: 111 ALIENLQREDLNPIEIADAYAKLIEKCHLTQDELAKRVGQSRSHITNMLRLLQLPVQIQD 170
Query: 185 MIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
M+ + +++GHAR L+S D A+ V + SVR E ++ + + +K
Sbjct: 171 MVSRGTLTMGHARALLSVEDADEQLRLAEQTVKEAWSVRKLEMVIYQPKKVSRETEKPAL 230
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++++ + +G ++ I+ +G+ I Y + + L+ I L+
Sbjct: 231 PT-----EYRRYQEQVQAYLGTSVRIQPGKKRGKIEIDYYSEDDLRRIMDLM 277
>gi|94501610|ref|ZP_01308127.1| chromosome partitioning protein Spo0J [Oceanobacter sp. RED65]
gi|94426293|gb|EAT11284.1| chromosome partitioning protein Spo0J [Oceanobacter sp. RED65]
Length = 298
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 20/306 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP-----EKKTETIPESQDCISIHSIVPNPHNPR 55
M+ KR LG GL AL+ S E T + E+ + I + P + PR
Sbjct: 1 MA---KKRGLGTGLDALLAGAASSKSQQTDAPQESDTPQVRETLKQLPIEYLQPGRYQPR 57
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAID----NGLYKIIAGERRFRAAKMASLSEVPV 111
E LE+L SI++ GI+QP++VR I + Y+IIAGERR+RAA++A L EVPV
Sbjct: 58 KDMHPEALEELAASIRAQGIMQPIVVRPISSTSADTRYEIIAGERRWRAAQIAELHEVPV 117
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
II++V +++++ +A++EN+QR++LNP+EEA +L E+ TQ + VGKSR V N
Sbjct: 118 IIKDVPDEAAIAMALIENIQRENLNPMEEARALHRLQEEFALTQQQVADAVGKSRVTVTN 177
Query: 172 ILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
+LR++ L VR ++ +I +GHAR L + + A+ +VSK ++VR TE LV +
Sbjct: 178 LLRLMNLNEDVRTLLEHGDIDMGHARALLGLQGENQSEAARQVVSKALTVRQTEALVSKW 237
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKI 288
K + K + LE K+ ++G + +KH KGQ I Y + ++L
Sbjct: 238 -----HEPKKTKKEEPKNPDIDRLESKLGERLGAKVELKHNQKGKGQLVISYSSLDELDG 292
Query: 289 ICSLLG 294
I + +
Sbjct: 293 ILNHIK 298
>gi|255994561|ref|ZP_05427696.1| stage 0 sporulation protein J [Eubacterium saphenum ATCC 49989]
gi|255993274|gb|EEU03363.1| stage 0 sporulation protein J [Eubacterium saphenum ATCC 49989]
Length = 290
Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 103/293 (35%), Positives = 168/293 (57%), Gaps = 6/293 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ ++ LG+GL AL +VN + + +E E + I I I PN PR F
Sbjct: 1 MAE---RKGLGKGLGALFEDVNID-STEIEGSEANKEDINFIEIDEIAPNESQPRKTFNK 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L +SIK+HG+IQP++VR Y+++AGERR+RAA++A LSEVP I+R + ++
Sbjct: 57 EKLEELARSIKTHGVIQPIVVRKQG-SHYEVVAGERRWRAARIAGLSEVPCIVRELTDEQ 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +AI+ENVQR+DLNP+EEA G +I +Y TQ+++ V KSR ++ N LR+LKLP
Sbjct: 116 NMLVAIIENVQREDLNPIEEARGIRAMIEDYELTQDEVAKAVSKSRPYITNALRMLKLPD 175
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+V +M+ ++S GHAR ++S + + + E + +K
Sbjct: 176 AVLDMVSAGKLSAGHARAILSAKEEEQTEIAKHVETKGLS-VREAEKLSKKGLSFDRKKP 234
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + +E ++SS +G +++ NKG+ I+Y + E+L+ + L
Sbjct: 235 GKHPTKNAAVKQIESELSSALGTKVNLSQNGNKGKIEIEYYSREELEGLIEAL 287
>gi|88797175|ref|ZP_01112765.1| ParB-like partition protein [Reinekea sp. MED297]
gi|88780044|gb|EAR11229.1| ParB-like partition protein [Reinekea sp. MED297]
Length = 296
Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 98/300 (32%), Positives = 172/300 (57%), Gaps = 10/300 (3%)
Query: 1 MSNNYSKRRLGRGLAALI---GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
MS K+ LGR +LI EV + ++P + + I + + PR
Sbjct: 1 MS--PKKKGLGRNFGSLITTQAEVKEIAETPVDHVKASDSVLKELPIEWLQRGRYQPRRD 58
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E LE+L SI++ GI+QP++VR I Y++IAGERR+RA+++ L +P +IR+V
Sbjct: 59 MSDEALEELATSIRAQGIMQPVVVRPIGPQSYELIAGERRWRASQLVGLETIPAVIRDVP 118
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ ++ +A++EN+QR++LNP+EEA+ ++L E+ TQ ++ VGKSR V N+LR++
Sbjct: 119 DEDAIAMALIENIQRENLNPIEEAMALQRLQKEFELTQAEVAEAVGKSRVTVTNLLRLMT 178
Query: 178 LPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L ++M+ ++ +GHAR L ++ SD + A+ +V+K M+VR TE LV+ +
Sbjct: 179 LEPDTKKMLEHGDLEMGHARALLGLNGSDQVDAARQVVAKGMTVRQTENLVRTLSR--KS 236
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ + + + + LE+ +S ++G ++ IKH KG IKY + ++L I +
Sbjct: 237 KVALPKDDSRNDANIKRLEEMLSKRLGASVQIKHGAGGKGSLTIKYTSLDELDGILEHVK 296
>gi|300115600|ref|YP_003762175.1| parB-like partition protein [Nitrosococcus watsonii C-113]
gi|299541537|gb|ADJ29854.1| parB-like partition protein [Nitrosococcus watsonii C-113]
Length = 291
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 92/297 (30%), Positives = 170/297 (57%), Gaps = 9/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+G + + + E + + I + PR
Sbjct: 1 MA--VKKRGLGRGLDALLG-LGATELPLDISEAKAKEELRRLPLDQIRRGKYQPRMEICP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L SI++ GI+QP++VR +G +++IAGERR+RAA+M L E+P ++R+V +++
Sbjct: 58 TALEELADSIRAQGIVQPIVVRPGGHGTFELIAGERRWRAAQMVGLDEIPAVVRDVPDQA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA ++LI E+G T + VG+SR+ V+N+LR+L L
Sbjct: 118 AVAMALIENIQREDLNPIEEANALQRLIDEFGITHQEASQAVGRSRAAVSNLLRLLALED 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ ++ +GHAR L +S A+++ + +SVR+TE LV+ +
Sbjct: 178 EVKRLVENGDLEMGHARALLALSGESQRKTARMVAQQGLSVRETERLVRRLQQ---PERP 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ + + L+++++ ++G + +H + G+ I Y + ++L I + +
Sbjct: 235 KRSKEKSLDPDIHRLQEELAERLGAVVRFQHTASGSGKLLIHYHSIDELDGILAHIK 291
>gi|304570814|ref|YP_002519241.2| chromosome partitioning protein ParB [Caulobacter crescentus
NA1000]
Length = 304
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 7/295 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS +R LGRGL+AL+GEV+ + + I + NP PR F
Sbjct: 11 MSE--GRRGLGRGLSALLGEVDAAPAQAPGEQ---LGGSREAPIEILQRNPDQPRRTFRE 65
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E LEDL SI+ G++QP++VR + Y+I+AGERR+RAA+ A L VP+++R +D+
Sbjct: 66 EDLEDLSNSIREKGVLQPILVRPSPDTAGEYQIVAGERRWRAAQRAGLKTVPIMVRELDD 125
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ LEI I+ENVQR DLN LEEAL Y+ L+ ++ TQ +I +GKSRSHVAN +R+L L
Sbjct: 126 LAVLEIGIIENVQRADLNVLEEALSYKVLMEKFERTQENIAQTIGKSRSHVANTMRLLAL 185
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+ + E++ GHAR + + +DP++LA+ I+ +SVR+TE L ++ N + K
Sbjct: 186 PDEVQSYLVSGELTAGHARAIAAAADPVALAKQIIEGGLSVRETEALARKAPNLSAGKSK 245
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
R K+ LE +SS +GL++SI HR + G I Y T EQL +C+ L
Sbjct: 246 GGRPPRVKDTDTQALESDLSSVLGLDVSIDHRGSTGTLTITYATLEQLDDLCNRL 300
>gi|16127982|ref|NP_422546.1| chromosome partitioning protein ParB [Caulobacter crescentus CB15]
gi|239977516|sp|B8GW30|PARB_CAUCN RecName: Full=Chromosome-partitioning protein parB
gi|239977517|sp|P0CAV8|PARB_CAUCR RecName: Full=Chromosome-partitioning protein parB
gi|13425526|gb|AAK25714.1| chromosome partitioning protein ParB [Caulobacter crescentus CB15]
gi|220965977|gb|ACL97333.1| chromosome partitioning protein parB [Caulobacter crescentus
NA1000]
Length = 294
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 7/295 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS +R LGRGL+AL+GEV+ + + I + NP PR F
Sbjct: 1 MSE--GRRGLGRGLSALLGEVDAAPAQAPGEQ---LGGSREAPIEILQRNPDQPRRTFRE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E LEDL SI+ G++QP++VR + Y+I+AGERR+RAA+ A L VP+++R +D+
Sbjct: 56 EDLEDLSNSIREKGVLQPILVRPSPDTAGEYQIVAGERRWRAAQRAGLKTVPIMVRELDD 115
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ LEI I+ENVQR DLN LEEAL Y+ L+ ++ TQ +I +GKSRSHVAN +R+L L
Sbjct: 116 LAVLEIGIIENVQRADLNVLEEALSYKVLMEKFERTQENIAQTIGKSRSHVANTMRLLAL 175
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+ + E++ GHAR + + +DP++LA+ I+ +SVR+TE L ++ N + K
Sbjct: 176 PDEVQSYLVSGELTAGHARAIAAAADPVALAKQIIEGGLSVRETEALARKAPNLSAGKSK 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
R K+ LE +SS +GL++SI HR + G I Y T EQL +C+ L
Sbjct: 236 GGRPPRVKDTDTQALESDLSSVLGLDVSIDHRGSTGTLTITYATLEQLDDLCNRL 290
>gi|150392467|ref|YP_001322516.1| parB-like partition protein [Alkaliphilus metalliredigens QYMF]
gi|149952329|gb|ABR50857.1| parB-like partition protein [Alkaliphilus metalliredigens QYMF]
Length = 289
Score = 162 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 108/292 (36%), Positives = 165/292 (56%), Gaps = 4/292 (1%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
KR LGRGL ALI ++ S ++K E ISI I PN PR F+
Sbjct: 2 TKLKKRGLGRGLEALIPDMIIMEASHDEKQ---VEKLQLISIEEISPNEDQPRKTFDETA 58
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
LE+L +SI+ HG+IQP+IV + + Y+IIAGERR+RAA+ L EVP IIR + L
Sbjct: 59 LEELAKSIERHGMIQPIIV-SKEKRGYQIIAGERRWRAARKIQLKEVPCIIREYSRRQLL 117
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
EIA++EN+QR++L+ +EEA Y+ LI EY TQ+ + +GKSR H+ N+LR+L+L +
Sbjct: 118 EIALIENLQRENLSIIEEAKAYKYLIDEYDVTQDQLAEALGKSRPHITNMLRLLQLDERI 177
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+MI+ E I+ GH R L+S D Q+ + + + ++ E +K+ +
Sbjct: 178 IDMIQGERITGGHGRALLSIKDSERQYQIALKVESERLNVRQVEGLVKALLENQKEKKKK 237
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+EK+ + ++E + G +SI KG+ I+Y +E L+ I +L
Sbjct: 238 KQEKDLIIVEIEDNLKKLFGTKVSIVKGQKKGKIEIEYYNDEDLERILEMLN 289
>gi|121999216|ref|YP_001004003.1| parB-like partition proteins [Halorhodospira halophila SL1]
gi|121590621|gb|ABM63201.1| chromosome segregation DNA-binding protein [Halorhodospira
halophila SL1]
Length = 297
Score = 162 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 94/301 (31%), Positives = 165/301 (54%), Gaps = 13/301 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MSN KR LGRGL AL+G + + + + PH PR +F+
Sbjct: 1 MSN--KKRGLGRGLDALLG---AEPGAVAAGHPVDGGELRDLPVDLLERGPHQPRRHFDD 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L++L SI++ G++QPL+VR D G ++IIAGERR+RAA+ A + VP ++R++ +++
Sbjct: 56 QALQELADSIRAQGVVQPLVVRPTDTGRFEIIAGERRWRAAQRAGIDTVPALVRDIPDEA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ + ++EN+QR+DLNPLE A ++LI E+G + VG+SR+ V N+LR+L+L
Sbjct: 116 AIAVGLIENLQREDLNPLEAAGALQRLIHEFGLSHQKTADAVGRSRTSVTNLLRLLELNE 175
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ +I + + GHA+ L + + A + ++VR TE LV+ +
Sbjct: 176 DVQRLISEGRLEAGHAKALAGLTGTAQSEAAARVARDHLTVRQTETLVRRYQQAADTSAD 235
Query: 239 IFEGS----REKEKYLTDLEKKISSKVGLNISIKHRN--NKGQFCIKYETNEQLKIICSL 292
+G+ + + + L ++ ++G + I+H KG+ I+Y + E+L I
Sbjct: 236 DAKGAAGEGKRLDPDVERLRDTLADRLGAPVDIQHSRRQGKGRLVIRYSSLEELDGILGR 295
Query: 293 L 293
+
Sbjct: 296 I 296
>gi|316931728|ref|YP_004106710.1| parB-like partition protein [Rhodopseudomonas palustris DX-1]
gi|315599442|gb|ADU41977.1| parB-like partition protein [Rhodopseudomonas palustris DX-1]
Length = 296
Score = 162 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 128/298 (42%), Positives = 184/298 (61%), Gaps = 11/298 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + + RLGRGLA+LIG+V E+ P +Q + I I NP NPR F
Sbjct: 1 MADEH-RSRLGRGLASLIGDVGGEATQAER-----PRAQRKVPIEFIKANPRNPRRTFTD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SIK HG+IQP++VR + Y+IIAGERR+RAA+ A L EVP++ +V +
Sbjct: 55 AELGELSDSIKQHGVIQPIVVRPVKGAADRYEIIAGERRWRAAQRAGLHEVPIVPVDVSD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LEIAIVENVQR+DLNPLEEALGY+ L +E+ +Q +I IVGKSRSHVAN++R++KL
Sbjct: 115 ALALEIAIVENVQREDLNPLEEALGYQALAAEFNRSQEEIAKIVGKSRSHVANMMRLIKL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+ +I E++ GHAR L+ DP ++A+ IV++ ++VR TE L E+ + K +K
Sbjct: 175 PDDVKSLIASGELTAGHARALIGLPDPSAIAKRIVAEGLNVRQTEALAHEEGVPERKPQK 234
Query: 239 IFEG---SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K+ LEK++S +G+ ++I G I+Y +QL I L
Sbjct: 235 PRATAAAKSVKDADTLALEKRLSDALGMKVTIDDHEGAGALQIRYADLDQLDDIIRRL 292
>gi|86747514|ref|YP_484010.1| parB-like partition proteins [Rhodopseudomonas palustris HaA2]
gi|86570542|gb|ABD05099.1| chromosome segregation DNA-binding protein [Rhodopseudomonas
palustris HaA2]
Length = 296
Score = 162 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 127/298 (42%), Positives = 184/298 (61%), Gaps = 11/298 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + + RLGRGLA+LIG+V E+ P +Q + I I NP NPR F
Sbjct: 1 MADEH-RSRLGRGLASLIGDVGGEAAHVER-----PRAQRKVPIEFIKANPRNPRRSFTD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SIK HG+IQP++VR + N ++IIAGERR+RAA+ A L EVP++ +V +
Sbjct: 55 AELGELSDSIKQHGVIQPIVVRPVKGTNDRFEIIAGERRWRAAQRAGLHEVPIVPVDVSD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LEIAIVENVQR++LNPLEEA GY L +E+ +Q++I IVGKSRSHVAN++R+ KL
Sbjct: 115 ALALEIAIVENVQRENLNPLEEAQGYHALANEFKRSQDEIAKIVGKSRSHVANMMRLTKL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V E+I ++S GHAR L+ DP + A+ IV++ ++VR TE L ++ + K +K
Sbjct: 175 PDDVLELIAAGQLSAGHARALIGVPDPSAAAKRIVAEGLNVRQTEALAHDEGVPERKPQK 234
Query: 239 IFEG---SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K+ LEK++S +G+ ++I R+ G I+Y +QL I L
Sbjct: 235 PRASASAKPAKDADTLALEKRVSDALGMKVTIDDRDGTGSLQIRYADLDQLDDIIRRL 292
>gi|288956856|ref|YP_003447197.1| chromosome partitioning protein [Azospirillum sp. B510]
gi|288909164|dbj|BAI70653.1| chromosome partitioning protein [Azospirillum sp. B510]
Length = 303
Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 118/308 (38%), Positives = 190/308 (61%), Gaps = 16/308 (5%)
Query: 1 MSNNYSKRR-----LGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR 55
M ++ + LGRGL+AL GE + + +K ++ + I + P + PR
Sbjct: 1 MIDDTKQGGARRASLGRGLSALFGEATEDYSALDKVRQS-----KQVPIEFVHPGKYQPR 55
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVII 113
F+ E L+ L +SI+ GI+QPL+VR D Y++IAGERR+RAA++A L EVPVII
Sbjct: 56 RTFDEEALQGLVESIRDKGILQPLLVRRDAEDANSYELIAGERRWRAAQIAGLHEVPVII 115
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
R++ ++ +LEIA++EN+QR+DL PLEEA GY +L+ E+ +TQ D+ VGKSRSHVAN++
Sbjct: 116 RDLSDREALEIALIENIQRQDLTPLEEAEGYRRLMEEFEHTQEDLARAVGKSRSHVANMM 175
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELV----QEQ 229
R+L LP V+ M++ ++ GHAR L++ DP+ +A+ +V + ++VR TE+L+ +
Sbjct: 176 RLLALPEPVKTMVQDGALTAGHARALLTAPDPVEMAREVVIRGLNVRQTEDLMRGDQPKA 235
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
K K+ L +LE++IS+++GL ++I + +G I Y+T +QL +
Sbjct: 236 KKGKGANGAAGSAPAMKDVDLINLEEEISARIGLKVAINPQGQRGTITIHYQTLDQLDDV 295
Query: 290 CSLLGEND 297
LG +
Sbjct: 296 LHRLGGEE 303
>gi|188993429|ref|YP_001905439.1| chromosome partitioning protein [Xanthomonas campestris pv.
campestris str. B100]
gi|167735189|emb|CAP53401.1| chromosome partitioning protein [Xanthomonas campestris pv.
campestris]
Length = 309
Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 96/304 (31%), Positives = 168/304 (55%), Gaps = 11/304 (3%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQSIDSP----EKKTETIPESQDCISIHSIVPNPHNP 54
MS KR LGRGL AL+G + + ++ ++ + + + P + P
Sbjct: 1 MSKPTPAKKRGLGRGLEALLGPKGAAAAAAPAGADESALQPGDTLRQLPVTQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L +SIK+ G+IQP++ R + G ++I+AGERR+RA+++A L+EVPV++R
Sbjct: 61 RREMDEVKLAELAESIKAQGVIQPIVARELAPGQFEIVAGERRWRASQLAGLTEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR
Sbjct: 121 ELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAEAVGRSRASVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD-- 230
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q+
Sbjct: 181 LLELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAG 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+K + + + LE ++S +G + H KG+ I Y + L +
Sbjct: 241 KVPGSLRKGKPAAVAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|116493784|ref|YP_805518.1| Spo0J-like protein [Lactobacillus casei ATCC 334]
gi|191637026|ref|YP_001986192.1| Chromosome partitioning protein, DNA-binding exonuclease
[Lactobacillus casei BL23]
gi|227534575|ref|ZP_03964624.1| stage 0 DNA-binding protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239631039|ref|ZP_04674070.1| chromosome segregation DNA-binding protein [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|301065360|ref|YP_003787383.1| Spo0J-like protein, ParB-like nuclease domain [Lactobacillus casei
str. Zhang]
gi|116103934|gb|ABJ69076.1| chromosome segregation DNA-binding protein [Lactobacillus casei
ATCC 334]
gi|190711328|emb|CAQ65334.1| Chromosome partitioning protein, DNA-binding exonuclease
[Lactobacillus casei BL23]
gi|227187824|gb|EEI67891.1| stage 0 DNA-binding protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239527322|gb|EEQ66323.1| chromosome segregation DNA-binding protein [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|300437767|gb|ADK17533.1| Spo0J-like protein, ParB-like nuclease domain [Lactobacillus casei
str. Zhang]
gi|327381053|gb|AEA52529.1| ParB-like partition protein [Lactobacillus casei LC2W]
gi|327384228|gb|AEA55702.1| ParB-like partition protein [Lactobacillus casei BD-II]
Length = 290
Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 96/297 (32%), Positives = 160/297 (53%), Gaps = 10/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + + LGRG+ A+ + E + + + + + I PNP+ PR F+
Sbjct: 1 MA-NKNNKGLGRGIDAIFKDF-------ESPDLSANNTVEELPLIDIRPNPYQPRKTFDE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
EGL++L SIK G+ QP+IVR Y+II GERRFRA+K+A +P I+R+ ++
Sbjct: 53 EGLKELAGSIKQTGVFQPIIVRK-SVSGYEIITGERRFRASKLAGKETIPSIVRDFNDPE 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DL PL+EA Y+ LI TQ ++ + +GKSR ++AN LR+L LP
Sbjct: 112 MMEIAVLENLQREDLTPLDEAQAYDTLIKRLNLTQAEVSARLGKSRPYIANYLRLLTLPQ 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V++M+ ++S+G ARTL+S D + V +L + + +
Sbjct: 172 QVKQMLSANQLSMGQARTLLSLKDKSKMVSVAKKTINENLTVRQLERLINQMNAGNTRPA 231
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ K Y+ E ++ + G ++I KG+ I + + + L I ++L N
Sbjct: 232 TKEKPKSPYVRATENQLGERFGTKVNINEGNKGKGKIEIDFTSEKDLNRILAMLDVN 288
>gi|157964059|ref|YP_001504093.1| parB-like partition protein [Shewanella pealeana ATCC 700345]
gi|157849059|gb|ABV89558.1| parB-like partition protein [Shewanella pealeana ATCC 700345]
Length = 294
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 104/295 (35%), Positives = 178/295 (60%), Gaps = 12/295 (4%)
Query: 6 SKRRLGRGLAALIGEVNQSI----DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
KR LG+GL AL+ + + E + + + + I + P + PR SE
Sbjct: 4 KKRGLGKGLDALLSTSQAASQRVAPAIEVEQDIKNDDLITLDIDRLQPGKYQPRKDMSSE 63
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LE+L +SI++ GIIQP++VR + Y+IIAGERR+RA+++A LS +P I++ V ++++
Sbjct: 64 ALEELAESIRAQGIIQPIVVRKVSPESYEIIAGERRWRASQLAGLSAIPCIVKQVADEAA 123
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+ IA++EN+QR+DLN +EEA+ +LI E+ T I VGKSR+ V+N+LR+ L
Sbjct: 124 VAIALIENIQREDLNAMEEAIALNRLIEEFDLTHQQIADAVGKSRATVSNLLRLNGLNEP 183
Query: 182 VREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+ M+ +I +GH R L +S + +LA+++V+K+++VR+TE LV + N+ E +K
Sbjct: 184 VKRMLEYGDIDMGHGRALLAISGDEQTNLARLVVAKELTVRETERLVSKTLNQTEIVEK- 242
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
K+ + LE ++ ++G +S+ H + KG+ I Y+ +L+ I S +
Sbjct: 243 ----PAKDHDVVRLESQLIERLGAKVSLTHNKKGKGKMVINYQNLSELEGIISKI 293
>gi|328541704|ref|YP_004301813.1| ParB-like nuclease domain family [polymorphum gilvum SL003B-26A1]
gi|326411456|gb|ADZ68519.1| ParB-like nuclease domain family [Polymorphum gilvum SL003B-26A1]
Length = 305
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 133/301 (44%), Positives = 198/301 (65%), Gaps = 7/301 (2%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTE-TIPESQDCISIHSIVPNPHNPRNYF 58
M+ + + +RLGRGLAALIG+ + E T P + I + PNP NPR F
Sbjct: 1 MAEDGGRNKRLGRGLAALIGDAGIGTSAEPASGERTPPRDSRKVPIEFLEPNPRNPRKSF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ L DL +SI+ GIIQP++VR G ++IIAGERR+RAA+ A L E PVI+R++
Sbjct: 61 NEKDLGDLTESIREKGIIQPILVRPAAGKAGRFEIIAGERRWRAAQKAGLHEAPVIVRDI 120
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++ +LE+AI+ENVQR DLNP+EEALGYEQL +E+ Y+Q ++ ++GKSRSHVAN LR+L
Sbjct: 121 TDQEALELAIIENVQRADLNPIEEALGYEQLTAEFNYSQGELAKVIGKSRSHVANTLRLL 180
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN-KKEK 235
KLP++V++ + + I+ GHAR L++ DP +LA++IV K +SVR+ E+L Q+ + K
Sbjct: 181 KLPNAVKDYLAEGLITAGHARALITLEDPSALAELIVEKGLSVREAEKLAQDPEILSKLS 240
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLL 293
K + EK+ LEK+++ +GL +++ H+ K G+ I+Y + EQL +C L
Sbjct: 241 SPKKTAAALEKDADTRALEKRLADTLGLKVAVGHKAGKESGELKIRYGSLEQLDDLCRRL 300
Query: 294 G 294
G
Sbjct: 301 G 301
>gi|261410100|ref|YP_003246341.1| parB-like partition protein [Paenibacillus sp. Y412MC10]
gi|329925118|ref|ZP_08280062.1| stage 0 sporulation protein J [Paenibacillus sp. HGF5]
gi|261286563|gb|ACX68534.1| parB-like partition protein [Paenibacillus sp. Y412MC10]
gi|328940237|gb|EGG36569.1| stage 0 sporulation protein J [Paenibacillus sp. HGF5]
Length = 279
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 103/289 (35%), Positives = 172/289 (59%), Gaps = 16/289 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLG+GL ALI ++ D + I + + NP+ PR F E +++L
Sbjct: 3 KRLGKGLDALIPSLSIHDD----------DKVVEIPLSQLRANPYQPRKTFNDEAIQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI+ HG+IQP+IVR++ Y+IIAGERRFRA++ + +P ++R+ ++ +EIA++
Sbjct: 53 ESIRQHGVIQPIIVRSV-LKGYEIIAGERRFRASQYCGKATIPAVVRSFSDQQVMEIALI 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR++LN +E A+ Y+ L+ ++ TQ ++ VGKSRSH+AN LR+L LP V+E +
Sbjct: 112 ENLQRENLNAMEIAVAYQGLMEQFSLTQEELSLKVGKSRSHIANFLRLLSLPEEVKENVS 171
Query: 188 KEEISLGHARTLVSTSDP---LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ +S+GHAR +V DP LA+ V ++ SVR+ EE V+ D K K +
Sbjct: 172 RGTLSMGHARAIVGIKDPILVKQLAKQCVEQEWSVRELEEAVKNLDRK--PADKAKPKVK 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ Y+ LE+ + + + IKH +KG+ + Y + + L+ + LL
Sbjct: 230 NRDPYIDHLEEDLRERFKTTVKIKHNKDKGKIELNYYSKQDLERLLELL 278
>gi|304313409|ref|YP_003813007.1| ParB-like partition protein [gamma proteobacterium HdN1]
gi|301799142|emb|CBL47385.1| ParB-like partition protein [gamma proteobacterium HdN1]
Length = 305
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 95/311 (30%), Positives = 166/311 (53%), Gaps = 23/311 (7%)
Query: 1 MSNNYSKRRLGRGLAALIG-------------EVNQSIDSPEKKTETIPESQDCISIHSI 47
MS K+ LGRGL AL+ +++ D ++E + + + +
Sbjct: 1 MS--TKKKGLGRGLDALLSMAAAPAPMPLLSEPKSEAADIAVAESEIVQGEMRHLPVEFL 58
Query: 48 VPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK-IIAGERRFRAAKMASL 106
+ PR + L++L SIK+ G++QP+IVR + IIAGERR+RA+++A L
Sbjct: 59 ERGRYQPRRDMNQDALQELADSIKAQGLMQPIIVRPLPTKNRYEIIAGERRWRASQLAEL 118
Query: 107 SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSR 166
VP I+R+V + ++L +A++EN+QR+DLNP+EEA+ +L E+ T ++ VGKSR
Sbjct: 119 DTVPCIVRDVPDNAALAMALIENIQREDLNPIEEAVALTRLQEEFELTHQEVADAVGKSR 178
Query: 167 SHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEE 224
V N+LR++ L R M+ ++ +GHAR + + A++I +K +SVR TE
Sbjct: 179 VTVTNLLRLMGLSPEARRMLEHGDLEMGHARAILALDQHRQTEAAKIISAKGLSVRQTEA 238
Query: 225 LVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETN 283
LV+ + + + + L+ +++K+G + I+H KG+ I+Y +
Sbjct: 239 LVRHLQTAQPDAPIRY----TVDPDVRSLQDDLATKIGAPVLIQHSAKGKGKLVIRYNSL 294
Query: 284 EQLKIICSLLG 294
++L I S +
Sbjct: 295 DELDGILSHIK 305
>gi|302035748|ref|YP_003796070.1| chromosomal partitioning protein ParB [Candidatus Nitrospira
defluvii]
gi|300603812|emb|CBK40144.1| Chromosomal partitioning protein ParB [Candidatus Nitrospira
defluvii]
Length = 283
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 102/292 (34%), Positives = 170/292 (58%), Gaps = 15/292 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K+ LGRGL AL+ + E + + +IVPN PR F L
Sbjct: 1 MEKKALGRGLDALLP-------TGRTTAEPERGDVQELRLEAIVPNRFQPRQQFSEVELA 53
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L S+K +G++QP++VR +G+Y++IAGERR RAAK+A + ++P ++RNV ++ S+ +
Sbjct: 54 ELTASLKQNGLLQPILVRRKGDGIYELIAGERRLRAAKLAGMQKIPALVRNVSDQESMVL 113
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR DLNP+E A Y+++++E+G TQ I V RS VAN+LR++ LPS V+
Sbjct: 114 ALVENLQRDDLNPMETARAYQRMLNEFGLTQEAIAQKVACDRSSVANLLRLMSLPSEVQH 173
Query: 185 MIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
MI +++S GHA+ + ++ + +SLA IV ++SVR+ E LVQE ++ K+
Sbjct: 174 MIESDQLSTGHAKVILGLMTPAAQISLATQIVDGQLSVREAERLVQEHAEARKPGKRPVR 233
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ LE+++ ++G + ++ G+ I Y + E+L + L
Sbjct: 234 APLRSD-----LEERLQKRLGTRVDVQRGRRGGKIVIHYFSPEELDGVVERL 280
>gi|288939802|ref|YP_003442042.1| parB-like partition protein [Allochromatium vinosum DSM 180]
gi|288895174|gb|ADC61010.1| parB-like partition protein [Allochromatium vinosum DSM 180]
Length = 324
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 106/316 (33%), Positives = 176/316 (55%), Gaps = 25/316 (7%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP-----------------ESQDCISIH 45
N K+ LGRGL AL+G + ++ P E+ + +
Sbjct: 8 NTPRKKGLGRGLDALLGAARPPASRLDPVSDGTPTTLSGGGVGPNPGLSPVETVRRLPLE 67
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG-----LYKIIAGERRFRA 100
I + PR F+ E L +L SI++ G+IQP++VR + Y+IIAGERR+RA
Sbjct: 68 YIQRGRYQPRRDFDPEALRELADSIRAQGVIQPIVVRPLAEPGATGARYEIIAGERRWRA 127
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
++ A L+E+PV++R VD +++L IA++EN+QR DLNPLEEA E+LI+E+ T D+
Sbjct: 128 SQQAGLAEIPVVVREVDERTALAIALIENIQRADLNPLEEAGALERLITEFDLTHQDVAE 187
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMS 218
VGKSR+ V+N+LR+L+L + V+E++ + ++ +GHAR L + A +V+ +S
Sbjct: 188 AVGKSRATVSNLLRLLELNADVKELVAQSQLEMGHARALLGLKGDIQSQTAHQVVAAGLS 247
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFC 277
VR+TE LV+ E + + S + + L+ ++ ++G ++ I+H G+
Sbjct: 248 VRETERLVRRVQQADEPSRATPKPSSADDPNIRQLQNDLTDRLGAHVWIQHGQRGSGKLV 307
Query: 278 IKYETNEQLKIICSLL 293
I Y T ++L I S +
Sbjct: 308 IAYNTLDELDGILSRI 323
>gi|257885577|ref|ZP_05665230.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,231,501]
gi|261206907|ref|ZP_05921596.1| chromosome partitioning protein ParB family [Enterococcus faecium
TC 6]
gi|289567294|ref|ZP_06447673.1| stage 0 sporulation protein J [Enterococcus faecium D344SRF]
gi|294616669|ref|ZP_06696440.1| ParB-like partitioning protein [Enterococcus faecium E1636]
gi|257821433|gb|EEV48563.1| chromosome partitioning protein ParB family [Enterococcus faecium
1,231,501]
gi|260078535|gb|EEW66237.1| chromosome partitioning protein ParB family [Enterococcus faecium
TC 6]
gi|289160913|gb|EFD08834.1| stage 0 sporulation protein J [Enterococcus faecium D344SRF]
gi|291590489|gb|EFF22227.1| ParB-like partitioning protein [Enterococcus faecium E1636]
Length = 296
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 106/293 (36%), Positives = 180/293 (61%), Gaps = 9/293 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRG+ AL ++ + + ++ + ++ + PNP+ PR FE L+
Sbjct: 2 KKSKGLGRGIDALFQDLENL-----ETVDVKDDTVVQLPLNELRPNPYQPRKTFEEVSLQ 56
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ G+ QP+IVR Y+IIAGERRFRA+K+A +P I+R+ D ++ +++
Sbjct: 57 ELANSIEQSGVFQPIIVRRSAVKGYEIIAGERRFRASKLAEKETIPAIVRDFDEEAMMQV 116
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNPLEEA YE L+ TQ ++ S +GKSR ++AN LR+L LP V+E
Sbjct: 117 AVLENLQREDLNPLEEAEAYEMLMKNLKLTQAEVASRLGKSRPYIANYLRLLSLPDLVKE 176
Query: 185 MIRKEEISLGHARTLVSTSDPL---SLAQVIVSKKMSVRDTEELVQEQD-NKKEKRKKIF 240
M++ + +S+G ARTL+ + LA V++ ++VR E+LV E + N +++KKI
Sbjct: 177 MVQDQRLSMGQARTLLGLKNKTLILKLANRAVTENLTVRQLEQLVSELNQNDGKEKKKIP 236
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++EK Y+ + E ++ K G +++I+ ++ KG+ I+Y + + L I +L
Sbjct: 237 RLAKEKPYYIRESEDRLMDKFGTSVAIQEKDGKGKIEIEYLSQKDLTRILDIL 289
>gi|148251786|ref|YP_001236371.1| chromosome segregation DNA-binding protein [Bradyrhizobium sp.
BTAi1]
gi|146403959|gb|ABQ32465.1| chromosome segregation DNA-binding protein [Bradyrhizobium sp.
BTAi1]
Length = 298
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 128/303 (42%), Positives = 189/303 (62%), Gaps = 12/303 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ S+ RLGRGLA+LIG+V + +P ++ P +Q + I + PNP NPR F
Sbjct: 1 MAD-ESRSRLGRGLASLIGDVGREAGAPPER----PRNQRKVPIEFLKPNPRNPRKTFSD 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SIK HG+IQP++VR + Y+IIAGERR+RA++ A L EVP++ +V +
Sbjct: 56 SELAELSASIKQHGVIQPIVVRPVKGQQDRYEIIAGERRWRASQAAGLHEVPIVPVDVSD 115
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LE+AI+ENVQR+DLNP+EEA GY L +E+ Q +I IVGKSRSHVAN++R+ KL
Sbjct: 116 SDALELAIIENVQREDLNPMEEAQGYHALANEFKRNQEEIAKIVGKSRSHVANMMRLTKL 175
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P+ V+ I EIS GHAR L++ DPL+ A+ I+++ ++VR TE L ++ + K +K
Sbjct: 176 PAEVQGFIATGEISAGHARALINLPDPLTAAKKIIAEGLNVRQTEALAHDEGVPERKPQK 235
Query: 239 IFEG-----SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ LEK++ +GL +SI HR+ G I Y + EQL + L
Sbjct: 236 PRSSGGGAAPEKKDADTLALEKRVGDALGLTVSISHRDPGGTVQITYRSLEQLDEVMRRL 295
Query: 294 GEN 296
+
Sbjct: 296 EQG 298
>gi|225873768|ref|YP_002755227.1| chromosome partitioning protein parB [Acidobacterium capsulatum
ATCC 51196]
gi|225793895|gb|ACO33985.1| chromosome partitioning protein parB [Acidobacterium capsulatum
ATCC 51196]
Length = 310
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 162/302 (53%), Gaps = 9/302 (2%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP-----ESQDCISIHSIVPNPHNPRNY 57
++ +R LG+GL +L+ V + K I + I NP R +
Sbjct: 9 DSAKRRALGKGLESLLPRVQAKAEPEAPKAGITAPVFEVGKPREIPVGEIERNPWQTRTH 68
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
F+ E L +L SI + G++QP++VR + G +++IAGERR+ A++ A +P I+R V
Sbjct: 69 FDEEQLAELTASITATGVVQPILVRTLPTGRFQLIAGERRWLASQRAGKETIPAILRQVT 128
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ ++E+ IVEN+QR DLNP+E+A YE+L E+ TQ + GK R+ V+N LR+LK
Sbjct: 129 DQQAMEMTIVENLQRTDLNPMEQARAYERLGREFQMTQEQMAKRTGKDRASVSNFLRLLK 188
Query: 178 LPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
LP V+ + ++S GHARTL+ AQ +++ MSVR TE VQ + +
Sbjct: 189 LPGEVQAKVESGDLSFGHARTLLALEDPESIQKAAQKVLALSMSVRQTESYVQGILHPER 248
Query: 235 KRKK-IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K+ K E + + + + ++ +GL + I+ + +G+ I+Y E + +L
Sbjct: 249 KQAKGGEEKKPAIDPNVREAQDQMQRALGLRVRIEDKKGRGRVIIEYSGLEDFDALLEML 308
Query: 294 GE 295
+
Sbjct: 309 TK 310
>gi|21244625|ref|NP_644207.1| chromosome partitioning protein [Xanthomonas axonopodis pv. citri
str. 306]
gi|21110308|gb|AAM38743.1| chromosome partitioning protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 308
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 97/303 (32%), Positives = 167/303 (55%), Gaps = 10/303 (3%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQSIDSPEKKTET---IPESQDCISIHSIVPNPHNPR 55
M+ KR LGRGL AL+G + +P +E +S + + + P + PR
Sbjct: 1 MNKPIPAKKRGLGRGLEALLGPKGAAAAAPGAASEETLQPGDSLRQLPVAQLQPGKYQPR 60
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
+ L +L +SIK+ G+IQP++ R + ++I+AGERR+RA+++A L+EVPV++R
Sbjct: 61 REMDEVKLAELAESIKAQGVIQPIVARELAPAQFEIVAGERRWRASQLAGLTEVPVVVRE 120
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR+
Sbjct: 121 LDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAGAVGRSRASVSNLLRL 180
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD--N 231
L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q+
Sbjct: 181 LELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAGK 240
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIIC 290
+K + + LE ++S +G + H KG+ I Y + L +
Sbjct: 241 VPGSLRKGKPAPVAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGVL 300
Query: 291 SLL 293
L
Sbjct: 301 ERL 303
>gi|254283857|ref|ZP_04958825.1| chromosome partitioning protein Spo0J [gamma proteobacterium
NOR51-B]
gi|219680060|gb|EED36409.1| chromosome partitioning protein Spo0J [gamma proteobacterium
NOR51-B]
Length = 298
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 85/299 (28%), Positives = 170/299 (56%), Gaps = 8/299 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP-----EKKTETIPESQDCISIHSIVPNPHNPR 55
MS K++L RGL AL+G ++S+ +P + + + + + + ++ + PR
Sbjct: 1 MS--VKKKKLNRGLDALLGAGSRSVTTPGTSDHDAVSTSGDDQLKNLPLDTLQRGKYQPR 58
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
F+ L +L SI++ G++QP++ RA++ G ++IIAGERR+RAA++A + +P +IR+
Sbjct: 59 RDFDDAALAELADSIRAQGVMQPIVARALEPGRFEIIAGERRWRAAQLAGIETIPAVIRD 118
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
V +++++ +A++EN+QR++LNP+EEA ++L +E+ +Q ++ VGKSRS VAN++R+
Sbjct: 119 VSDEAAIAMALIENIQRENLNPIEEASALKRLQNEFELSQEEVAKAVGKSRSAVANLMRL 178
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L L RE++ + I GHA+ L++ ++ K ++ + + +
Sbjct: 179 LSLEPETRELLASKGIDTGHAKVLLALEGQSQVSMAKEVAKKALSVRQTETRVKQALAAS 238
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ E + + LE+ + ++G ++I H + G+ I Y + + L I + +
Sbjct: 239 EPAVAEPKSGVDPDIQRLEQDLGERLGAAVAIDHLHHGAGKLTINYSSLDHLDGILNKI 297
>gi|253573868|ref|ZP_04851210.1| predicted protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846345|gb|EES74351.1| predicted protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 281
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 101/292 (34%), Positives = 173/292 (59%), Gaps = 16/292 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLG+GL ALI ++ D + I ++ + NP+ PR F+ E + +L
Sbjct: 3 KRLGKGLDALIPALSIQDD----------DKVIEIPLNQLRANPYQPRKTFDEEAIRELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI+ HG+IQP+IVR++ Y+IIAGERRFRA++ + +P ++R+ ++ +EIA++
Sbjct: 53 ESIRQHGVIQPIIVRSV-LKGYEIIAGERRFRASQYCGNATIPAVVRSFSDQQVMEIALI 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR++LN +E A+ Y+ L+ ++ TQ ++ VGKSRSH+AN LR+L LP V+E +
Sbjct: 112 ENLQRENLNAMEVAVAYQGLMDQFQLTQEELSLKVGKSRSHIANFLRLLSLPDEVKECVS 171
Query: 188 KEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ +S+GHAR L LAQ + + SVRD E VQ+ D KK ++K +
Sbjct: 172 RGTLSMGHARALVGLKDPDTIKQLAQQCIDHEWSVRDLENAVQQLDRKK--QEKPKPAGK 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+++ Y+ ++E+ + + + IK +KG+ I Y + + L+ + +L
Sbjct: 230 KRDPYIEEVEESLRERYKTTVKIKANKDKGKIEINYYSQQDLQRLLDMLTSG 281
>gi|192288724|ref|YP_001989329.1| parB-like partition protein [Rhodopseudomonas palustris TIE-1]
gi|192282473|gb|ACE98853.1| parB-like partition protein [Rhodopseudomonas palustris TIE-1]
Length = 296
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 128/298 (42%), Positives = 184/298 (61%), Gaps = 11/298 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + + RLGRGLA+LIG+V E+ P +Q + I I NP NPR F
Sbjct: 1 MADEH-RSRLGRGLASLIGDVGGEATQVER-----PRAQRKVPIEFIKANPRNPRRTFTD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SIK HG+IQP++VR + Y+IIAGERR+RAA+ A L EVP++ +V +
Sbjct: 55 AELGELSDSIKQHGVIQPIVVRPVKGSADRYEIIAGERRWRAAQRAGLHEVPIVPVDVSD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LEIAIVENVQR+DLNPLEEALGY+ L +E+ +Q +I IVGKSRSHVAN++R++KL
Sbjct: 115 ALALEIAIVENVQREDLNPLEEALGYQALAAEFNRSQEEIAKIVGKSRSHVANMMRLIKL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+ +I E++ GHAR L+ DP ++A+ IV++ ++VR TE L E+ + K +K
Sbjct: 175 PDDVKSLIASGELTAGHARALIGLPDPSTIAKRIVAEGLNVRQTEALAHEEGVPERKPQK 234
Query: 239 IF---EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K+ LEK++S +G+ ++I G I+Y +QL I L
Sbjct: 235 PRATASAKSVKDADTLALEKRLSDALGMKVTIDDHEGTGAVQIRYADLDQLDDIIRRL 292
>gi|169830192|ref|YP_001700350.1| stage 0 sporulation protein J [Lysinibacillus sphaericus C3-41]
gi|168994680|gb|ACA42220.1| Stage 0 sporulation protein J [Lysinibacillus sphaericus C3-41]
Length = 282
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 85/291 (29%), Positives = 150/291 (51%), Gaps = 11/291 (3%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL + + I + IV NP PR F+ E L++L
Sbjct: 3 KGLGKGIGALFPGESLEQS----------GQVEEIQLDLIVANPFQPRKIFDEEALQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SI HGI+Q I ++I+AGERR+RA +A L +PVII+ + + +E+AI+
Sbjct: 53 DSINEHGILQ-PIAVRKKGRKFEIVAGERRYRACLLAGLDVIPVIIKELSDAQMMELAIL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL +EEA Y+ L+ TQ ++ +GKSR H+AN +R+L LP VR+ +
Sbjct: 112 ENLQREDLTVIEEAEAYQSLMENLKLTQEELSKRLGKSRPHIANHVRLLALPEDVRKFMN 171
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S+G R L+ + +++V + + ++ E+ + ++K+
Sbjct: 172 DGTLSMGQGRALLGLKNKRRISEVAMKVMNQGLNVRQVEMLVQTLNEEVSRETIPPKKKD 231
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
++ E ++ G N+ I+ NNKG+ I++ + + L+ I +L +
Sbjct: 232 IFVAAKESQLRDYFGTNVQIRKNNNKGKIEIEFYSEDDLERILEILNLQEE 282
>gi|257057909|ref|YP_003135741.1| chromosome segregation DNA-binding protein [Saccharomonospora
viridis DSM 43017]
gi|256587781|gb|ACU98914.1| chromosome segregation DNA-binding protein [Saccharomonospora
viridis DSM 43017]
Length = 328
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 99/325 (30%), Positives = 163/325 (50%), Gaps = 30/325 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSID-------------------------SPEKKTETI 35
MS K LGRGLAALI + + S E E
Sbjct: 1 MSE--RKGGLGRGLAALIPTGPINTERGRGEGASSAVGVRGVPGSFAVSGASQEHGGEVA 58
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
I + ++ PNP PR F+ E L +L SI+ G++QP++VR + Y+++ GE
Sbjct: 59 GAVYREIPVEAVKPNPKQPRQVFDQEALAELEHSIREFGLMQPIVVRRLSADEYELVMGE 118
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAA+ A L +P I+RN + + L A++EN+ R LNPLEEA Y+QL+ E+G T
Sbjct: 119 RRLRAAQQAGLKNIPAIVRNTSDDAMLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 178
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVI 212
++ + +G+SR + N +R+L+LP V+ + +S GHAR L+ LA I
Sbjct: 179 EELAARIGRSRPVITNTIRLLRLPLPVQRRVAAGVLSAGHARALLSLDDPDQQEELAGRI 238
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
V++ +SVR TEE V ++ + +++ + + L +++S + +
Sbjct: 239 VAEGLSVRATEEAVTLAKSESKPKQRKAARKPVQAPGVEALAERLSDAFDTRVKVDVGRR 298
Query: 273 KGQFCIKYETNEQLKIICSLLGEND 297
KG+ +++ + E L+ I +L+ N
Sbjct: 299 KGRIVVEFGSLEDLERIVALMTPNS 323
>gi|209544082|ref|YP_002276311.1| parB-like partition protein [Gluconacetobacter diazotrophicus PAl
5]
gi|209531759|gb|ACI51696.1| parB-like partition protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 296
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 108/298 (36%), Positives = 179/298 (60%), Gaps = 7/298 (2%)
Query: 1 MS--NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS + ++ RLGRGLAAL+G+ T + + + + P P PR
Sbjct: 1 MSTKKDQARPRLGRGLAALLGD-QAPTAIARVSGRTEQDRAGTLPVDLLEPGPFQPRQVM 59
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNV 116
E + L +L SI++ GI+QP++VR + Y+IIAGERR+RAA+MASL EVPV IR +
Sbjct: 60 EPDALAELADSIRTRGILQPILVRPHPDHADRYQIIAGERRWRAAQMASLHEVPVHIRAL 119
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D+ ++ A+VEN+QR DLN +EEA G ++L+ +Y TQ ++ +GKSRSHVAN++R+L
Sbjct: 120 DDGDAMAAALVENLQRADLNAIEEAEGLQRLLQDYSLTQEELAGALGKSRSHVANMVRLL 179
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
LP VR +R +++ GHAR L+ DP++ ++++ + ++VR TE L+Q ++++
Sbjct: 180 NLPPPVRAALRDGKLTAGHARALLGHPDPVAALKIVLEQGLNVRQTEALIQ--KATRQQQ 237
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + K+ + LE+ +S+++GL + I G I Y + +Q + + L
Sbjct: 238 QAPAKAAERKDPEIQVLERDLSARLGLKVQIAFDGRGGSIRILYHSLDQFDTVLARLN 295
>gi|241762354|ref|ZP_04760434.1| parB-like partition protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241373148|gb|EER62787.1| parB-like partition protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 311
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 181/306 (59%), Gaps = 10/306 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSI--DSPEKKTETIPES-QDCISIHSIVPNPHNPRNYF 58
+ K LGRGL+AL+GE+ + D+P+ E P + + +I P+P PR F
Sbjct: 7 NRPRKKGGLGRGLSALLGEIAEETLGDNPDTGNENAPSGAVRSLPVAAIFPHPDQPRRIF 66
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ L +L +SI G++QP++VR +G +I+AGERR+RAA+ A L ++PVI+R D
Sbjct: 67 DETALNELTESIAQRGVLQPIVVRPKGSGW-QIVAGERRWRAAQRARLHDIPVIVREFDE 125
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LE+A++EN+QR +LN +EEA Y++L ++G++ + +V KSRSH+ N+LR+L L
Sbjct: 126 SETLEVALIENIQRSELNAIEEAKAYQRLAEQFGHSPEALSKLVRKSRSHITNLLRLLDL 185
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ + ++++GHAR L++ DP LA+ ++ K +SVRDTE+LVQE N K K
Sbjct: 186 PEVVQDALITRQLTMGHARALITAPDPQKLAEKVIEKGLSVRDTEKLVQEIKNGKSKEPP 245
Query: 239 IFEGSREK------EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
+ + + L++ ++ + L ++I + G + Y + ++L +
Sbjct: 246 SKAKKGQTLAADGDDADILALQQLLTESLKLPVTIAYNGESGTISLDYSSMDELDFLFQR 305
Query: 293 LGENDF 298
L +DF
Sbjct: 306 LSGSDF 311
>gi|162147020|ref|YP_001601481.1| chromosome partitioning protein parB [Gluconacetobacter
diazotrophicus PAl 5]
gi|161785597|emb|CAP55168.1| putative chromosome partitioning protein parB [Gluconacetobacter
diazotrophicus PAl 5]
Length = 296
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 108/298 (36%), Positives = 179/298 (60%), Gaps = 7/298 (2%)
Query: 1 MS--NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS + ++ RLGRGLAAL+G+ T + + + + P P PR
Sbjct: 1 MSTKKDQARPRLGRGLAALLGD-QAPTAIARVSGRTEQDRAGTLPVDLLEPGPFQPRQVM 59
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNV 116
E + L +L SI++ GI+QP++VR + Y+IIAGERR+RAA+MASL EVPV IR +
Sbjct: 60 EPDALAELADSIRTRGILQPILVRPHPDHADRYQIIAGERRWRAAQMASLHEVPVHIRVL 119
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D+ ++ A+VEN+QR DLN +EEA G ++L+ +Y TQ ++ +GKSRSHVAN++R+L
Sbjct: 120 DDGDAMAAALVENLQRADLNAIEEAEGLQRLLQDYSLTQEELAGALGKSRSHVANMVRLL 179
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
LP VR +R +++ GHAR L+ DP++ ++++ + ++VR TE L+Q ++++
Sbjct: 180 NLPPPVRAALRDGKLTAGHARALLGHPDPVAALKIVLEQGLNVRQTEALIQ--KATRQQQ 237
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + K+ + LE+ +S+++GL + I G I Y + +Q + + L
Sbjct: 238 QAPAKAAERKDPEIQVLERDLSARLGLKVQIAFDGRGGSIRILYHSLDQFDTVLARLN 295
>gi|56552874|ref|YP_163713.1| parB-like partition protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753426|ref|YP_003226319.1| parB-like partition protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|56544448|gb|AAV90602.1| parB-like partition protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|258552789|gb|ACV75735.1| parB-like partition protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 311
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 181/306 (59%), Gaps = 10/306 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSI--DSPEKKTETIPES-QDCISIHSIVPNPHNPRNYF 58
+ K LGRGL+AL+GE+ + D+P+ E P + + +I P+P PR F
Sbjct: 7 NRPRKKGGLGRGLSALLGEIAEETSGDNPDTGNENAPSGAVRSLPVAAIFPHPDQPRRIF 66
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ L +L +SI G++QP++VR +G +I+AGERR+RAA+ A L ++PVI+R D
Sbjct: 67 DETALNELTESIAQRGVLQPIVVRPKGSGW-QIVAGERRWRAAQRARLHDIPVIVREFDE 125
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LE+A++EN+QR +LN +EEA Y++L ++G++ + +V KSRSH+ N+LR+L L
Sbjct: 126 SETLEVALIENIQRSELNAIEEAKAYQRLAEQFGHSPEALSKLVRKSRSHITNLLRLLDL 185
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ + ++++GHAR L++ DP LA+ ++ K +SVRDTE+LVQE N K K
Sbjct: 186 PEVVQDALITRQLTMGHARALITAPDPQKLAEKVIEKGLSVRDTEKLVQEIKNGKSKEPP 245
Query: 239 IFEGSREK------EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
+ + + L++ ++ + L ++I + G + Y + ++L +
Sbjct: 246 SKAKKGQTLAADGDDADILALQQLLTESLKLPVTIAYNGESGTISLDYSSMDELDFLFQR 305
Query: 293 LGENDF 298
L +DF
Sbjct: 306 LSGSDF 311
>gi|39933368|ref|NP_945644.1| parB-like partition proteins [Rhodopseudomonas palustris CGA009]
gi|39652993|emb|CAE25735.1| chromosome partitioning protein, ParB [Rhodopseudomonas palustris
CGA009]
Length = 296
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 128/298 (42%), Positives = 184/298 (61%), Gaps = 11/298 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + + RLGRGLA+LIG+V E+ P +Q + I I NP NPR F
Sbjct: 1 MADEH-RSRLGRGLASLIGDVGGEATQVER-----PRAQRKVPIEFIKANPRNPRRTFTD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SIK HG+IQP++VR + Y+IIAGERR+RAA+ A L EVP++ +V +
Sbjct: 55 AELGELSDSIKQHGVIQPIVVRPVKGSADRYEIIAGERRWRAAQRAGLHEVPIVPVDVSD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LEIAIVENVQR+DLNPLEEALGY+ L +E+ +Q +I IVGKSRSHVAN++R++KL
Sbjct: 115 ALALEIAIVENVQREDLNPLEEALGYQALAAEFNRSQEEIAKIVGKSRSHVANMMRLIKL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+ +I E++ GHAR L+ DP ++A+ IV++ ++VR TE L E+ + K +K
Sbjct: 175 PDDVKSLIASGELTAGHARALIGLPDPSAIAKRIVAEGLNVRQTEALAHEEGVPERKPQK 234
Query: 239 IF---EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K+ LEK++S +G+ ++I G I+Y +QL I L
Sbjct: 235 PRATASAKSVKDADTLALEKRLSDALGMKVTIDDHEGTGAVQIRYADLDQLDDIIRRL 292
>gi|121602744|ref|YP_988353.1| chromosome partitioning protein ParB [Bartonella bacilliformis
KC583]
gi|120614921|gb|ABM45522.1| chromosome partitioning protein ParB [Bartonella bacilliformis
KC583]
Length = 303
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 133/305 (43%), Positives = 195/305 (63%), Gaps = 16/305 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPES----------QDCISIHSIVPN 50
M+ + SK+RLGRGLAALIG++N +S + S + +SI I PN
Sbjct: 1 MNEDQSKKRLGRGLAALIGDINLDGNSVYQSEYQPDFSGLSVKSEIAFEKIVSIELISPN 60
Query: 51 PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSE 108
P NPR YF L+DL QSI+ HG+IQP++VR +++IAGERR+RAA+ A+LS+
Sbjct: 61 PCNPRRYFTDLELDDLAQSIRQHGVIQPIVVRPSRNYPNRFELIAGERRWRAAQRANLSQ 120
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
+PVIIR+VD+K++LE+AI+EN+QR DLN +EE GYE L++E+GYTQ ++ I+GKSRSH
Sbjct: 121 LPVIIRDVDDKTALELAIIENIQRTDLNSIEEGKGYELLLNEHGYTQVELAQIIGKSRSH 180
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
+AN LR+LKLP V++ + + ++S GHAR L++ +P LA I+ + +SVR E L
Sbjct: 181 IANTLRLLKLPPEVQQFVIEGQLSAGHARCLITVDNPRDLANKIIREGLSVRQAEMLA-- 238
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKI 288
N++ + + +EK+ LEK +S +G+ + I+H G I Y + EQL
Sbjct: 239 --NERMDSENKKKIVKEKDAETESLEKLLSDIIGMKVIIQHSKKGGNLKIHYSSLEQLDD 296
Query: 289 ICSLL 293
IC L
Sbjct: 297 ICRRL 301
>gi|126651985|ref|ZP_01724177.1| Spo0J [Bacillus sp. B14905]
gi|126591254|gb|EAZ85363.1| Spo0J [Bacillus sp. B14905]
Length = 282
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 85/291 (29%), Positives = 150/291 (51%), Gaps = 11/291 (3%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL + + I + IV NP PR F+ E L++L
Sbjct: 3 KGLGKGIGALFPGESLEQS----------GLVEEIQLDLIVANPFQPRKIFDEEALQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SI HGI+Q I ++I+AGERR+RA +A L +PVII+ + + +E+AI+
Sbjct: 53 DSINEHGILQ-PIAVRKKGRKFEIVAGERRYRACLLAGLDVIPVIIKELSDAQMMELAIL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL +EEA Y+ L+ TQ ++ +GKSR H+AN +R+L LP VR +
Sbjct: 112 ENLQREDLTVIEEAEAYQSLMENLHLTQEELSKRLGKSRPHIANHVRLLALPEDVRNFMN 171
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S+G R L+ + +++V + + ++ + E+ + ++K+
Sbjct: 172 DGTLSMGQGRALLGLKNKRRISEVAMKVMKQGLNVRQVEMLVQSLNEEVSRETIPPKKKD 231
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
++ E ++ G N+ I+ NNKG+ I++ + + L+ I +L +
Sbjct: 232 IFVAAKESQLRDYFGTNVQIRKNNNKGKIEIEFYSEDDLERILEILNVQEE 282
>gi|325917538|ref|ZP_08179741.1| chromosome segregation DNA-binding protein [Xanthomonas vesicatoria
ATCC 35937]
gi|325536254|gb|EGD08047.1| chromosome segregation DNA-binding protein [Xanthomonas vesicatoria
ATCC 35937]
Length = 309
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 95/304 (31%), Positives = 169/304 (55%), Gaps = 11/304 (3%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQSIDSP----EKKTETIPESQDCISIHSIVPNPHNP 54
M+ KR LGRGL AL+G + + + ++ + + + P + P
Sbjct: 1 MNKPIPAKKRGLGRGLEALLGPKGAAAAAAPGATSEDALQPGDTLRQLPVDQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L +SIK+ G+IQP++ RA+ G ++I+AGERR+RA+++A L+EVPV++R
Sbjct: 61 RREMDEVKLAELAESIKAQGVIQPIVARALAPGQFEIVAGERRWRASQLAGLTEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR
Sbjct: 121 ELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAEAVGRSRASVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD-- 230
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q+
Sbjct: 181 LLELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAG 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+K + + + L+ ++S +G + H KG+ I Y + L+ +
Sbjct: 241 KVPGSLRKGKPVTAAPQADIASLQTELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLEGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|83591331|ref|YP_431340.1| chromosome segregation DNA-binding protein [Moorella thermoacetica
ATCC 39073]
gi|83574245|gb|ABC20797.1| chromosome segregation DNA-binding protein [Moorella thermoacetica
ATCC 39073]
Length = 294
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 113/296 (38%), Positives = 180/296 (60%), Gaps = 11/296 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+KR LGRGL AL+ P++ + I+I IV H PR F++ LE
Sbjct: 1 MAKRGLGRGLEALLP--------PKEVDPETHAAITRIAIDRIVAGKHQPRKDFDNAKLE 52
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK HG+IQP++V+ +G Y+IIAGERR+RA + A L E+P II+ +D++++ EI
Sbjct: 53 ELAQSIKVHGVIQPIVVKPAGSGKYEIIAGERRWRACRQAGLKEIPAIIKTLDDRATAEI 112
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+++EN+QR+DLNPLEEA YE LI+E+ TQ +I VGKSR +AN LR+L+LP+ +++
Sbjct: 113 SLIENLQREDLNPLEEAEAYEALITEHHLTQEEIAGRVGKSRPVIANALRLLQLPTEIQK 172
Query: 185 MIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
M+R EIS GHAR L++ D A+ I + +SVR+TE ++++ ++ E +K
Sbjct: 173 MLRSNEISSGHARALLALKDAEHQVALAKKIKEENLSVRETEAIIKKIQSEGELARKKQN 232
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ + + +E+++ + + +KH G+ I Y E L+ I +L +
Sbjct: 233 PEKRESLEVRQVEERLQQVLSTRVKLKHGKKSGKIEIFYFGPEDLERIIMVLTGEN 288
>gi|295133322|ref|YP_003583998.1| ParB-like chromosome partition protein [Zunongwangia profunda
SM-A87]
gi|294981337|gb|ADF51802.1| ParB-like chromosome partition protein [Zunongwangia profunda
SM-A87]
Length = 299
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 95/299 (31%), Positives = 158/299 (52%), Gaps = 2/299 (0%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE-KKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I+S E K + + + + SI NP PR F
Sbjct: 1 MAKATKKQALGRGLSALLKDPQNDINSAEDKNADKLVGHIVELELSSIEVNPFQPRTSFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ L +L SIK G+IQP+ VR +D Y++++GERR+RA+K+ L +P IR +++
Sbjct: 61 EDALRELGSSIKELGVIQPITVRKLDFDKYQLVSGERRYRASKLIGLETIPAYIRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E AL Y++LI E TQ + VGK+RS +AN LR+LKL
Sbjct: 121 ESLEMALVENIQRQDLDPIEIALSYQRLIDEISLTQEQLSERVGKNRSTIANYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++ +R + +GH R L++ DP ++ + + + K +
Sbjct: 181 PIIQTGMRDGFLGMGHGRALINVDDPQIQLEIYEKILKNSLSVRDTEKLVKEAKNGPEPK 240
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEND 297
K+ + +G + +K +N KG+ I + + E+ I L+ +
Sbjct: 241 TVSKPAIPVTYKKSIKEFTDYLGTKVDVKVQKNGKGKLTIPFSSEEEFNRIKKLIQGEE 299
>gi|220936468|ref|YP_002515367.1| ParB-like partition protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219997778|gb|ACL74380.1| ParB-like partition protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 286
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 168/296 (56%), Gaps = 14/296 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL L+ + + E + I + I + PR + +
Sbjct: 1 MAR--RKTGLGRGLDVLLSSAGAA------QREQEDSNLRQIPVDQIRRGKYQPRIHIKQ 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LEDL SI++ G++QP++VR + G Y++IAGERR+RAA++A L EVP ++R++ +++
Sbjct: 53 EALEDLAASIRAQGVVQPVVVRPMGQG-YELIAGERRWRAAQLAGLHEVPAVVRDIPDQA 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++LNP+EEA +LI E+ T VG+SR+ V N+LR+L+L
Sbjct: 112 AAAMALIENIQRENLNPIEEARALHRLIQEFEMTHQQAAESVGRSRTGVTNLLRLLELGE 171
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ + ++ +GHAR ++ A+ +V+K +SVR+TE LVQ + R K
Sbjct: 172 VASRLLDEGQMEMGHARALLVLPAELQDETARKVVAKGLSVRETERLVQNLLKQ--DRHK 229
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
S + LE+ +S ++G ++I+ + KG+ I+Y + ++L I +
Sbjct: 230 TEVKSPAGNPDVRRLEESLSERLGAPVNIQYNNKGKGKLVIQYNSLDELDGILEHI 285
>gi|194467506|ref|ZP_03073493.1| parB-like partition protein [Lactobacillus reuteri 100-23]
gi|194454542|gb|EDX43439.1| parB-like partition protein [Lactobacillus reuteri 100-23]
Length = 294
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 107/301 (35%), Positives = 169/301 (56%), Gaps = 18/301 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N K LGRG+ AL E + TE E+ I + I PNP+ PR F+
Sbjct: 1 MAKN-KKGGLGRGIEALFAE--------NEVTELTDETVQDIKLSLIHPNPYQPRRTFDK 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L +L SI+ G+ QP+I+R D Y++IAGERRFRA+K+A +P I+R + +
Sbjct: 52 EALAELASSIEKSGVFQPIILRQTDPKINRYELIAGERRFRASKIAKQKTIPAIVRKMSD 111
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+EIA++EN+QR+DL PLEEA Y+ L+ + TQ + + +GKSR ++AN LR+L L
Sbjct: 112 DQMMEIAVLENLQREDLTPLEEAQAYQMLMDKLSLTQAQVANRLGKSRPYIANYLRLLGL 171
Query: 179 PSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P ++E + ++S+G ART+ + + LAQ V + ++VR EE+V + +
Sbjct: 172 PKVIKEFLNTGKLSMGQARTILGLKDKTKLVPLAQRAVEQNLTVRQLEEIVTQTNG--TA 229
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISI--KHRNNKGQFCIKYETNEQLKIICSLL 293
+KK ++ K Y+ + E ++ SK G +++ + G+ I Y +NE I LL
Sbjct: 230 KKKEERRTQRKPVYIREAESQLQSKFGTKVAVAQSRKKGAGKIEIPYTSNEDFTRILELL 289
Query: 294 G 294
Sbjct: 290 N 290
>gi|90023649|ref|YP_529476.1| chromosome segregation DNA-binding protein [Saccharophagus
degradans 2-40]
gi|89953249|gb|ABD83264.1| chromosome segregation DNA-binding protein [Saccharophagus
degradans 2-40]
Length = 304
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 100/306 (32%), Positives = 173/306 (56%), Gaps = 17/306 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKK---------TETIPESQDCISIHSIVPNP 51
M+ ++ LGRGL AL+ + + K T + + I +
Sbjct: 1 MA---KRKGLGRGLDALLSSGAAATPAEAIKAATSAAADVTTNVDGILKNLPIEFLQRGK 57
Query: 52 HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPV 111
+ PR E LE+L +SIKS G++QP++VR I + Y+IIAGERR+RA ++A L +P
Sbjct: 58 YQPRRDMHQEALEELAESIKSQGVMQPIVVRPIGDNKYEIIAGERRWRATQLAGLDTIPA 117
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
+IR V +++++ +A++EN+QR+DLNP+EEA ++L E+ T ++ VGKSR+ V N
Sbjct: 118 VIREVPDETAIAMALIENIQREDLNPMEEAFALKRLQDEFELTHQEVADAVGKSRTAVTN 177
Query: 172 ILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
+LR++ L VR ++ ++ +GHAR+L ++ + A+ IV+K +SVR E LV+
Sbjct: 178 LLRLINLTEDVRTLLEHGDLEMGHARSLLSLNEGQQRTAAREIVAKGLSVRQAEALVRRL 237
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKI 288
E ++ E + + + LE+K++ VG+ + ++H KG+ +KY ++L
Sbjct: 238 QQ--EAEQEKSETKTKIDPDIQKLEEKLAEHVGVPVIVQHSAKGKGRLVLKYNNLDELDG 295
Query: 289 ICSLLG 294
I + L
Sbjct: 296 ILAHLK 301
>gi|148543346|ref|YP_001270716.1| chromosome segregation DNA-binding protein [Lactobacillus reuteri
DSM 20016]
gi|184152756|ref|YP_001841097.1| chromosome partitioning protein ParB [Lactobacillus reuteri JCM
1112]
gi|227364420|ref|ZP_03848510.1| stage 0 DNA-binding protein [Lactobacillus reuteri MM2-3]
gi|325683619|ref|ZP_08163135.1| chromosome partition ParB protein [Lactobacillus reuteri MM4-1A]
gi|148530380|gb|ABQ82379.1| chromosome segregation DNA-binding protein [Lactobacillus reuteri
DSM 20016]
gi|183224100|dbj|BAG24617.1| chromosome partitioning protein ParB [Lactobacillus reuteri JCM
1112]
gi|227070513|gb|EEI08846.1| stage 0 DNA-binding protein [Lactobacillus reuteri MM2-3]
gi|324977969|gb|EGC14920.1| chromosome partition ParB protein [Lactobacillus reuteri MM4-1A]
Length = 294
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 109/301 (36%), Positives = 169/301 (56%), Gaps = 18/301 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N K LGRG+ AL E + TE E+ I + I PNP+ PR F+
Sbjct: 1 MAKN-KKGGLGRGIEALFAE--------NEVTELADETVQDIKLSLIHPNPYQPRRTFDK 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L +L SI+ G+ QP+I+R D Y++IAGERRFRA+K+A +P I+R + +
Sbjct: 52 EALAELASSIEKSGVFQPIILRQTDPKINRYELIAGERRFRASKIAKQKTIPAIVRKMSD 111
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+EIA++EN+QR+DL PLEEA Y+ L+ + TQ + S +GKSR ++AN LR+L L
Sbjct: 112 DQMMEIAVLENLQREDLTPLEEAQAYQMLMDKLSLTQAQVASRLGKSRPYIANYLRLLGL 171
Query: 179 PSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P ++E + ++S+G ART+ S + LAQ V + ++VR EE+V + +
Sbjct: 172 PKVIKEFLNTGKLSMGQARTILGLKDKSKLVPLAQRAVGQNLTVRQLEEIVTQTNG--TA 229
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISI--KHRNNKGQFCIKYETNEQLKIICSLL 293
+KK ++ K Y+ + E ++ SK G +++ + G+ I Y +NE I LL
Sbjct: 230 KKKEERRTQRKPIYIREAESQLQSKFGTKVAVAQSRKKGAGKIEIPYTSNEDFTRILELL 289
Query: 294 G 294
Sbjct: 290 N 290
>gi|304412695|ref|ZP_07394298.1| parB-like partition protein [Shewanella baltica OS183]
gi|307305840|ref|ZP_07585586.1| parB-like partition protein [Shewanella baltica BA175]
gi|304348905|gb|EFM13320.1| parB-like partition protein [Shewanella baltica OS183]
gi|306911333|gb|EFN41759.1| parB-like partition protein [Shewanella baltica BA175]
Length = 292
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 96/293 (32%), Positives = 175/293 (59%), Gaps = 10/293 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSID--SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
KR LG+GL AL+ + + + E E + + + P + PR E L
Sbjct: 4 KKRGLGKGLDALLSNSHAASKKHTDEANVVDKKEELIHLDLDLLQPGKYQPRKDMSPEAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SI++ GIIQP++VR + N +Y+IIAGERR+RA+++A L+++P I++ V +++++
Sbjct: 64 EELAHSIRNQGIIQPIVVRQVANDMYEIIAGERRWRASQLAGLNKIPCIVKQVPDEAAVA 123
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR+DLN +EEA+ ++L+ E+ T + +VGKSR+ V+N+LR+ L V+
Sbjct: 124 IALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGLNEPVK 183
Query: 184 EMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ +I +GHAR L + + +LA+++ +K+++VR+TE L+ + N
Sbjct: 184 RLLEYGDIDMGHARALLAIDGEEQTNLARLVAAKELTVRETERLINQTLN-----PPKQA 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ K++ + LE+++ ++G +SI H G+ I Y+ +L I S +
Sbjct: 239 ETTTKDQDVCRLEQQLIERLGAKVSIAHSSKGTGKIVINYQNLAELDGILSKI 291
>gi|299133191|ref|ZP_07026386.1| parB-like partition protein [Afipia sp. 1NLS2]
gi|298593328|gb|EFI53528.1| parB-like partition protein [Afipia sp. 1NLS2]
Length = 296
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 123/301 (40%), Positives = 177/301 (58%), Gaps = 11/301 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + RLGRGLA+LIG+V E+ + + I I NP+NPR F
Sbjct: 1 MAEE--RSRLGRGLASLIGDVGGEAAHVERPSRAA----RKVPIEFIKANPNNPRRTFAD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L++L SI+ HG+IQP++VR + ++IIAGERR+RA++ A L EVP++ +
Sbjct: 55 AELDELSASIRQHGVIQPIVVRTVKGATDRFEIIAGERRWRASQRAGLHEVPIVTVEASD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++LEIAI+ENVQR DLN +EEALGY L + Y ++ +DI +VGKSRSHVAN +R+ KL
Sbjct: 115 SAALEIAIIENVQRSDLNAMEEALGYHALATTYNHSADDIAKLVGKSRSHVANTMRLTKL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P SV+ +I + ++S GHAR L++ DP + A+ V + +SVR E L E+ +K
Sbjct: 175 PDSVQALISEGKLSAGHARALINAKDPAAAAKQAVEQGLSVRQVEALSHEEGVPSRGAQK 234
Query: 239 IFEGSR---EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
S +K+ LEK+IS +GL +S+ HRN G I Y +QL I L
Sbjct: 235 ARGKSSGAAKKDADTLALEKRISDVLGLKVSVDHRNPGGSVHIAYRDLDQLDEILRRLES 294
Query: 296 N 296
Sbjct: 295 G 295
>gi|227543814|ref|ZP_03973863.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
reuteri CF48-3A]
gi|300908882|ref|ZP_07126345.1| plasmid partition ParB protein [Lactobacillus reuteri SD2112]
gi|146142503|gb|ABQ01721.1| Spo0J-like protein [Lactobacillus reuteri]
gi|227186191|gb|EEI66262.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
reuteri CF48-3A]
gi|300894289|gb|EFK87647.1| plasmid partition ParB protein [Lactobacillus reuteri SD2112]
Length = 294
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 108/301 (35%), Positives = 169/301 (56%), Gaps = 18/301 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N K LGRG+ AL E + TE E+ I + I PNP+ PR F+
Sbjct: 1 MAKN-KKGGLGRGIEALFAE--------NEVTELTDETVQDIKLSLIHPNPYQPRRTFDK 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L +L SI+ G+ QP+I+R D Y++IAGERRFRA+K+A +P I+R + +
Sbjct: 52 EALAELASSIEKSGVFQPIILRQTDPKINRYELIAGERRFRASKIAKQKTIPAIVRKMSD 111
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+EIA++EN+QR+DL PLEEA Y+ L+ + TQ + S +GKSR ++AN LR+L L
Sbjct: 112 DQMMEIAVLENLQREDLTPLEEAQAYQMLMDKLSLTQAQVASRLGKSRPYIANYLRLLGL 171
Query: 179 PSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P ++E + ++S+G ART+ + + LAQ V + ++VR EE+V + +
Sbjct: 172 PKMIKEFLNTGKLSMGQARTILGLKDKTKLVPLAQRAVEQNLTVRQLEEIVTQTNG--TA 229
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISI--KHRNNKGQFCIKYETNEQLKIICSLL 293
+KK ++ K Y+ + E ++ SK G +++ + G+ I Y +NE I LL
Sbjct: 230 KKKEERRTQRKPIYIREAESQLQSKFGTKVAVAQSRKKGAGKIEIPYTSNEDFTRILELL 289
Query: 294 G 294
Sbjct: 290 N 290
>gi|126176555|ref|YP_001052704.1| parB-like partition protein [Shewanella baltica OS155]
gi|153002869|ref|YP_001368550.1| parB-like partition protein [Shewanella baltica OS185]
gi|160877616|ref|YP_001556932.1| parB-like partition protein [Shewanella baltica OS195]
gi|217975456|ref|YP_002360207.1| parB-like partition protein [Shewanella baltica OS223]
gi|125999760|gb|ABN63835.1| chromosome segregation DNA-binding protein [Shewanella baltica
OS155]
gi|151367487|gb|ABS10487.1| parB-like partition protein [Shewanella baltica OS185]
gi|160863138|gb|ABX51672.1| parB-like partition protein [Shewanella baltica OS195]
gi|217500591|gb|ACK48784.1| parB-like partition protein [Shewanella baltica OS223]
gi|315269814|gb|ADT96667.1| parB-like partition protein [Shewanella baltica OS678]
Length = 292
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 96/293 (32%), Positives = 175/293 (59%), Gaps = 10/293 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSID--SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
KR LG+GL AL+ + + + E E + + + P + PR E L
Sbjct: 4 KKRGLGKGLDALLSNSHAASKKHTDEANVVDKKEELIHLDLDLLQPGKYQPRKDMSPEAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SI++ GIIQP++VR + N +Y+IIAGERR+RA+++A L+++P I++ V +++++
Sbjct: 64 EELAHSIRNQGIIQPIVVRQVANDMYEIIAGERRWRASQLAGLNKIPCIVKQVPDEAAVA 123
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR+DLN +EEA+ ++L+ E+ T + +VGKSR+ V+N+LR+ L V+
Sbjct: 124 IALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGLNEPVK 183
Query: 184 EMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ +I +GHAR L + + +LA+++ +K+++VR+TE L+ + N
Sbjct: 184 RLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLN-----PPKQA 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ K++ + LE+++ ++G +SI H G+ I Y+ +L I S +
Sbjct: 239 ETTTKDQDVCRLEQQLIERLGAKVSIAHSSKGTGKIVINYQNLAELDGILSKI 291
>gi|170729224|ref|YP_001763250.1| parB-like partition protein [Shewanella woodyi ATCC 51908]
gi|169814571|gb|ACA89155.1| parB-like partition protein [Shewanella woodyi ATCC 51908]
Length = 296
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 174/299 (58%), Gaps = 14/299 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSID------SPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
KR LG+GL AL+ + + S + + + + + + PR
Sbjct: 3 VKKRGLGKGLDALLSTSSAASAKLNQGQSDSTDQDIKNDDLIMLDVDMMQSGKYQPRKDM 62
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L++L +SIK+ G+IQP++VR + +Y+IIAGERR+RAA++A LS+VP I++ V +
Sbjct: 63 SPEALDELSESIKAQGVIQPILVRKVSPTMYEIIAGERRWRAAQLAKLSKVPCIVKQVPD 122
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+S++ IA++EN+QR+DLN +EEA+ E+L+ E+ T I VGKSR+ V+N+LR+ L
Sbjct: 123 ESAVVIALIENIQREDLNAMEEAIALERLMQEFNLTHQLIADAVGKSRATVSNLLRLNGL 182
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+ M+ +I +GHAR L + + +A+++ +K+++VR+TE LV + N E
Sbjct: 183 NEPVKRMLEYGDIDMGHARALLAIDGEEQTVIARMVAAKELTVRETERLVNKTLNPPEIA 242
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
K K+ + LE ++ ++G +SI H + KG+ I Y+ +L I S +G
Sbjct: 243 DK-----PAKDHDVARLESQLIERLGAKVSITHNKKGKGKLVINYQDLAELDGIISKIG 296
>gi|115522415|ref|YP_779326.1| parB-like partition proteins [Rhodopseudomonas palustris BisA53]
gi|115516362|gb|ABJ04346.1| chromosome segregation DNA-binding protein [Rhodopseudomonas
palustris BisA53]
Length = 300
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 124/295 (42%), Positives = 183/295 (62%), Gaps = 8/295 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + RLGRGLA+LIG+V E+ P +Q + I + NP NPR F
Sbjct: 8 MADEQ-RSRLGRGLASLIGDVGGEAAHLER-----PRAQRKVPIEFLKANPRNPRRAFAD 61
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SIK HG+IQP++VR + Y+IIAGERR+RAA+ A L EVP++ +V +
Sbjct: 62 AELIELSDSIKQHGVIQPIVVRPVKGVQDRYEIIAGERRWRAAQQAGLHEVPIVPLDVSD 121
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LEIAI+ENVQR+DLN +EEALGY L +++ ++Q+++ IVGKSRSHVAN++R+ KL
Sbjct: 122 AQALEIAIIENVQREDLNAMEEALGYHALANDFNHSQDEVAKIVGKSRSHVANMMRLTKL 181
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P SV+ +I E+S GHAR L+ DP + A+ IV++ ++VR E L E+ + K +K
Sbjct: 182 PDSVQALISSGELSAGHARALIGVPDPEAAAKRIVAEGLNVRQAEALAHEEGVPERKPQK 241
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
G K LEK++S +G+ ++I R+ G I+Y +QL + L
Sbjct: 242 PRAGKAAKAPDTVALEKRVSDCLGMKVTIDDRDGSGALHIRYADLDQLDDLVRRL 296
>gi|260576113|ref|ZP_05844106.1| parB-like partition protein [Rhodobacter sp. SW2]
gi|259021593|gb|EEW24896.1| parB-like partition protein [Rhodobacter sp. SW2]
Length = 305
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 114/299 (38%), Positives = 177/299 (59%), Gaps = 7/299 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCI--SIHSIVPNPHNPRNYF 58
M +R LGRGL+AL+ ++N + ++ I + ++PNP+ PR F
Sbjct: 1 MEKKSERRGLGRGLSALMADINITAEARNVNEPGAQGRTGNILVPVEKLIPNPNQPRRTF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII-AGERRFRAAKMASLSEVPVIIRNVD 117
E L DL +SI+ G++QPLIVR I I AGERR+RAA++A L E+PVIIR+ D
Sbjct: 61 SPEALSDLSESIRQKGVLQPLIVRPIPGSDGYEIVAGERRWRAAQLAQLHELPVIIRDFD 120
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ LE+AI+EN+QR DLN +EEA+G+ QL+ +G+TQ + + KSRSH+AN+LR+L
Sbjct: 121 DVEVLEVAIIENIQRADLNAIEEAVGFRQLMDGFGHTQEKLAQALSKSRSHIANLLRLLN 180
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP V+ ++R +S GHAR LV+T + LA+ +V++ +SVR+TE L + K
Sbjct: 181 LPDDVQALVRDGALSAGHARALVTTPNASELARQVVARGLSVRETERLAKAPAATKPAGH 240
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLG 294
+ EK+ LE +++ +G+++ I H G ++Y T + L +C +L
Sbjct: 241 RPKR--FEKDADTRALEADLAANLGMSVRIDHEPGGEAGTLTVRYNTLDDLDALCRVLS 297
>gi|289209754|ref|YP_003461820.1| parB-like partition protein [Thioalkalivibrio sp. K90mix]
gi|288945385|gb|ADC73084.1| parB-like partition protein [Thioalkalivibrio sp. K90mix]
Length = 280
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 96/292 (32%), Positives = 171/292 (58%), Gaps = 16/292 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+KR LGRGL AL+ D + S + I I + PR + L
Sbjct: 1 MAKRGLGRGLDALLSGAQSGGDESD--------SLAQLPIDQIRRGQYQPRVHMSEPALA 52
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SI++ GI+QP++VR ++ G +++IAGERR+RAA++A L VP ++R++ ++++ +
Sbjct: 53 ELAESIRAQGIVQPVVVRRVEGG-FELIAGERRWRAAQIAGLESVPAVVRDIPDQAAAAM 111
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+++EN+QR+DLNPLEEA +LI E+ T VG+SR+ V N+LR+L+L V+E
Sbjct: 112 SLIENIQREDLNPLEEAQAIRRLIDEFEMTHQAAADAVGRSRTSVTNLLRLLELHDVVKE 171
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ + + +GHAR+L + D +A +V + M+VR TE+LV++ + + + +K
Sbjct: 172 HVNEGRLEMGHARSLLALPLDDQPGVAATVVKRDMTVRATEQLVKKVLSAQPEPRKEAGP 231
Query: 243 SREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
S + LE ++S ++G + ++ +R KG+ I+Y + ++L I +
Sbjct: 232 S----PEVRQLESRLSDRLGAPVQVRYNRQGKGRLVIEYNSLDELDGILEHI 279
>gi|90415386|ref|ZP_01223320.1| chromosome partitioning protein ParB [marine gamma proteobacterium
HTCC2207]
gi|90332709|gb|EAS47879.1| chromosome partitioning protein ParB [marine gamma proteobacterium
HTCC2207]
Length = 294
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 167/299 (55%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIG--EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ ++ LG+GL AL+G + + + + + + PR
Sbjct: 1 MA--PKRQSLGKGLDALLGMADDTSFDAFDAPASNAADGQLRQLPVELLQRGKYQPRRDI 58
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
++ LE+L SI++ G++QPL+VR + + Y+IIAGERR+RAA+ A L VPVI+R V +
Sbjct: 59 NADALEELASSIRAQGVMQPLVVRQLADDRYEIIAGERRWRAAQQAGLDTVPVIVREVSD 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++++ +A++EN+QR+DLN +EE+L ++L E+ TQ + VGKSRS V N++R+ L
Sbjct: 119 EAAIAMALIENIQREDLNAMEESLALQRLQQEFQLTQQQVADAVGKSRSAVTNLMRLTSL 178
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V++++ + ++ LGHA+ L + S ++ A+ + M+VR TE LV++ + R
Sbjct: 179 ELEVQKLLERGDLELGHAKCLLALDGSVQVNAARTVAGTSMTVRQTEALVKKLQSSDISR 238
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ S + LE IS K+G+ + I+H G+ KY + ++L I L
Sbjct: 239 PVTEDQS---SPDIKRLENDISEKIGVPVMIQHSAKGAGKLIFKYSSVDELDGILDHLK 294
>gi|299541775|ref|ZP_07052098.1| stage 0 sporulation protein J [Lysinibacillus fusiformis ZC1]
gi|298725513|gb|EFI66154.1| stage 0 sporulation protein J [Lysinibacillus fusiformis ZC1]
Length = 282
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 89/291 (30%), Positives = 153/291 (52%), Gaps = 11/291 (3%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL + + I + IV NP PR F+ E L++L
Sbjct: 3 KGLGKGIGALFPGESLEHS----------GQVEEIQLDLIVANPFQPRKIFDEESLQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+Q I ++I+AGERR+RA +A L +PVII+ + + +E+AI+
Sbjct: 53 DSIKEHGILQ-PIAVRKKARKFEIVAGERRYRACLLAGLEVIPVIIKELSDAQMMELAIL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL +EEA Y+ L+ TQ ++ +GKSR H+AN +R+L LP VR+++
Sbjct: 112 ENLQREDLTVIEEAEAYQSLMENLHLTQEELSKRLGKSRPHIANHVRLLALPEDVRKLMN 171
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S+G R L+ + +++V + ++ N E+ + ++K+
Sbjct: 172 DGTLSMGQGRALLGLKNKRRISEVANKVITLGLNVRQVELLVQNLNEEVSRETIPPKKKD 231
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
++T E ++ G N+ IK NNKG+ I++ + + L+ I +L +
Sbjct: 232 IFVTAKESQLRDYFGTNVQIKKTNNKGKIEIEFYSEDDLERILEILNIQEE 282
>gi|295398150|ref|ZP_06808199.1| plasmid partition ParB protein [Aerococcus viridans ATCC 11563]
gi|294973669|gb|EFG49447.1| plasmid partition ParB protein [Aerococcus viridans ATCC 11563]
Length = 327
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 107/322 (33%), Positives = 171/322 (53%), Gaps = 28/322 (8%)
Query: 1 MSN--NYSKRRLGRGLAALIG----------------------EVNQSIDSPEKKTETIP 36
M+ N + LGRG+ A G Q+ +
Sbjct: 1 MAKQTNKQNKGLGRGIDAFFGGETLFTQDETDQEQVDVKDTAETSKQTASEATIEAPATD 60
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+ IS+ I PNP+ PR+ F+ E L DL +SI+ GI QP+ +R Y+IIAGER
Sbjct: 61 KMVQEISVEDIRPNPYQPRHQFDEEALNDLAKSIQEQGIFQPITLRKSAVKGYEIIAGER 120
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRA+K+A L+ VP I+R ++ +E +I+EN+QR+DL LEEA+ Y+QLI TQ+
Sbjct: 121 RFRASKIAGLTTVPAIVREFSDEQMIEASIIENLQREDLTALEEAMAYQQLIDVLAITQD 180
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIV 213
+ +GKSR+++ N LR+L L ++ +++ +S G ART+ S D SLA+ +V
Sbjct: 181 EAAKRLGKSRTYITNHLRLLGLSDDIKALVQSGALSAGQARTILGLKSKKDQSSLAKKVV 240
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE-KEKYLTDLEKKISSKVGLNISIKHRNN 272
++ ++VR E++VQ + +K K +E Y+ + E ++ K G N+ I +R
Sbjct: 241 AEGITVRQLEKMVQALNQPADKDIKKDGDKKEVVPPYIRESEDRLMDKFGTNVQINNRGK 300
Query: 273 KGQFCIKYETNEQLKIICSLLG 294
+G+ I+Y + E L I +L
Sbjct: 301 RGKIEIEYLSEEDLTRILDILN 322
>gi|71280617|ref|YP_271682.1| parB family protein [Colwellia psychrerythraea 34H]
gi|71146357|gb|AAZ26830.1| parB family protein [Colwellia psychrerythraea 34H]
Length = 300
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 176/304 (57%), Gaps = 16/304 (5%)
Query: 1 MSNNYSK--RRLGRGLAALI------GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPH 52
MS K RLGRGL AL+ GE + + I +VP +
Sbjct: 1 MSTAKRKGASRLGRGLDALLSPAIPAGESQTETTEASNSVKATDNELIKLPISKLVPGKY 60
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI 112
PR GLE+L SI+S GIIQP++VR + + Y+IIAGERR+RAAK+A L +P +
Sbjct: 61 QPRREMSDAGLEELSLSIQSQGIIQPIVVRLVGDDQYEIIAGERRWRAAKLAQLDIIPCL 120
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
++NV ++S++ IA++EN+QR+DLN +EEA+ E+L+ E+ T ++ VGKSR+ V+N+
Sbjct: 121 VKNVPDESAVAIALIENIQREDLNAMEEAVALERLLVEFDLTHEEVAIAVGKSRTTVSNL 180
Query: 173 LRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
LR+ KL V+ ++ +I +GHAR L + S AQ + +K+++VR+TE L+++
Sbjct: 181 LRLNKLNDEVKTLLENGDIEMGHARALLALEGEVQTSAAQTVATKELTVRETESLIKKIQ 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
N +++K+ EK +LE+ ++ K G +SI H KG+ I Y ++L I
Sbjct: 241 NPVAEKEKV-----EKAIETIELEQGLAEKFGAKVSISHNQKGKGKLVISYTNLDKLDEI 295
Query: 290 CSLL 293
+ +
Sbjct: 296 LTKI 299
>gi|89890952|ref|ZP_01202461.1| chromosome partitioning protein parB [Flavobacteria bacterium
BBFL7]
gi|89517097|gb|EAS19755.1| chromosome partitioning protein parB [Flavobacteria bacterium
BBFL7]
Length = 300
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 5/299 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP-EKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + + I++ +K + I + +++ I NP PR F
Sbjct: 1 MAKATKKQALGRGLSALLKDPSNDINNANDKNADKIVGNVVDLNLSDIEMNPFQPRTSFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SIK G+IQP+ VR + Y++++GERR RA+K+ L +P +R +++
Sbjct: 61 EENLRELASSIKELGVIQPITVRKMGFNKYELVSGERRCRASKLLGLDTIPAYVRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E AL Y++LI E TQ + VGKSRS + N LR+LKL
Sbjct: 121 ESLEMALVENIQRQDLDPIEIALSYQRLIEEIDLTQEQMSDRVGKSRSAITNYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKEKR 236
++ +R IS+GH R L++ + +SVRDTE +V+ +
Sbjct: 181 PIIQTGMRDGFISMGHGRALIAIESLDKQLDIYQQILANGLSVRDTEAIVKAAKGGGDTL 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ + L D K++S+ +G + KG+ I +++ ++L+ I L
Sbjct: 241 PQKQTKTTNLPSDLVDATKELSNTLGAKVIATLDAKGKGKLTIAFKSQKELERIIKQLN 299
>gi|311742155|ref|ZP_07715965.1| chromosome partitioning protein SpoOJ [Aeromicrobium marinum DSM
15272]
gi|311314648|gb|EFQ84555.1| chromosome partitioning protein SpoOJ [Aeromicrobium marinum DSM
15272]
Length = 303
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 93/296 (31%), Positives = 158/296 (53%), Gaps = 5/296 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS S R LGRGL ALI + + + + I +I PNP PR F+
Sbjct: 1 MSGRKS-RGLGRGLEALIP-AGPAEAADTGLQQVDGARFAELPIGAITPNPRQPRAVFDE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ + +L SI G++QP++VR Y++I GERR+RA++ A L+ + I+R+ ++
Sbjct: 59 DHMAELVHSITEVGLLQPIVVREAGPDRYELIMGERRWRASQKAGLATIGAIVRDTSDED 118
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
L A++EN+ R LNPLEEA Y+QL+ ++G TQ ++ +G+SR ++N LR+L+L
Sbjct: 119 LLRDALLENLHRSQLNPLEEAAAYQQLLDDFGCTQEELAQRIGRSRPQISNTLRLLRLSP 178
Query: 181 SVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+V+ + +S GHAR T+ + LA +V++ +SVR EE+V +R+
Sbjct: 179 AVQRRVAAGVLSAGHARALVTVANPEIQERLATRVVAEGLSVRALEEIVTLGPADTPRRQ 238
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
L DL ++S + + + +KG+ +++ T + L+ I L+
Sbjct: 239 ATRSSPTISAPRLADLAARLSERYDTRVKVDLGRSKGKVTVEFATLDDLERIVHLM 294
>gi|332995868|gb|AEF05923.1| ParB family protein [Alteromonas sp. SN2]
Length = 292
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 101/298 (33%), Positives = 174/298 (58%), Gaps = 12/298 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI--DSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR LGRGL AL+ + ++ TE + I +VP + PR
Sbjct: 1 MS--ARKRGLGRGLDALLATSQSTSQRETDAAATEATQSELSKLPIEFLVPGKYQPRKDM 58
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ LEDL SI++ GIIQP++VR +D+ Y+IIAGERR+RA+++A L EVP ++++V +
Sbjct: 59 SPDALEDLASSIRAQGIIQPIVVRKVDDNKYEIIAGERRWRASQLAQLDEVPCLVKDVPD 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++++ IA++EN+QR+DLN +EEA ++L++E+ T ++ VGKSR+ V N+LR+ L
Sbjct: 119 EAAVAIALIENIQREDLNAMEEAQALDRLMNEFSLTHQEVAEAVGKSRTTVTNLLRLNNL 178
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+ ++ +I +GHAR L + A V+ K ++VRDTE+LV++
Sbjct: 179 NDDVKLLVEHGDIEMGHARALLALDGEQQSEAANVVSGKGLTVRDTEKLVKKLLE----- 233
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ + + +L ++S +G ++I H KG+ I ++ +QL I + +
Sbjct: 234 PEKPKQEKQIDPDVQNLMTRLSENLGAPVTIDHNAKGKGKLVISFDDLQQLDGIITKI 291
>gi|77166528|ref|YP_345053.1| ParB-like partition protein [Nitrosococcus oceani ATCC 19707]
gi|254436282|ref|ZP_05049789.1| ParB-like nuclease domain family [Nitrosococcus oceani AFC27]
gi|76884842|gb|ABA59523.1| chromosome segregation DNA-binding protein [Nitrosococcus oceani
ATCC 19707]
gi|207089393|gb|EDZ66665.1| ParB-like nuclease domain family [Nitrosococcus oceani AFC27]
Length = 291
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 93/297 (31%), Positives = 170/297 (57%), Gaps = 9/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+G ++ + + E + + I + PR
Sbjct: 1 MA--VKKRGLGRGLDALLG-LSAAELPVDIGEAKAKEELRRLPLDQIRRGKYQPRMEICP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L SI++ GI+QP++VR NG +++IAGERR+RAA+M L E+P ++R+V +++
Sbjct: 58 TALEELADSIRAQGIVQPIVVRPGGNGTFELIAGERRWRAAQMVGLDEIPAVVRDVPDQA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ IA++EN+QR+DLNP+EEA ++LI E+G T + VG+SR+ V+N+LR+L L
Sbjct: 118 AVAIALIENIQREDLNPIEEANALQRLIDEFGITHQEASQAVGRSRAAVSNLLRLLALED 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ ++ +GHAR L +S A+++ + +SVR+TE L++ +
Sbjct: 178 EVKCLVENGDLEMGHARALLALSGESQRKTARMVAQQGLSVRETERLMRRLQQ---TPRP 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ + L+++++ ++G + +H + G+ I Y + ++L I + +
Sbjct: 235 KHPKEESLDPDIHRLQEELAERLGAVVRFQHTASGSGKLLIHYHSIDELDGILAHIK 291
>gi|120600843|ref|YP_965417.1| parB-like partition protein [Shewanella sp. W3-18-1]
gi|146295044|ref|YP_001185468.1| parB-like partition protein [Shewanella putrefaciens CN-32]
gi|120560936|gb|ABM26863.1| chromosome segregation DNA-binding protein [Shewanella sp. W3-18-1]
gi|145566734|gb|ABP77669.1| chromosome segregation DNA-binding protein [Shewanella putrefaciens
CN-32]
gi|319428562|gb|ADV56636.1| chromosome partitioning protein, ParB [Shewanella putrefaciens 200]
Length = 292
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 95/293 (32%), Positives = 178/293 (60%), Gaps = 10/293 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCI--SIHSIVPNPHNPRNYFESEGL 63
KR LG+GL AL+ + + + I ++++ I + + P + PR E L
Sbjct: 4 KKRGLGKGLDALLSNSHAASKKHTDEMAVIDKNEELIHLDLDLLQPGKYQPRKDMSPEAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SI++ GIIQP++VR +++ Y+IIAGERR+RA+++A + ++P I++ V +++++
Sbjct: 64 EELAHSIRNQGIIQPIVVRQVNDTQYEIIAGERRWRASQLAGIDKIPCIVKQVPDEAAIA 123
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR+DLN +EEA+ ++L+ E+ T + +VGKSR+ V+N+LR+ L V+
Sbjct: 124 IALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGLNEPVK 183
Query: 184 EMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ +I +GHAR L + + +LA+++ +K+++VR+TE L+ + N
Sbjct: 184 RLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLN-----PPKQA 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ K++ + LE+++ ++G +SI H KG+ I Y+ +L I S +
Sbjct: 239 ETTTKDQDVCRLEQQLIERLGAKVSIAHSSKGKGKIVINYQNLAELDGILSKI 291
>gi|330991273|ref|ZP_08315224.1| putative chromosome-partitioning protein parB [Gluconacetobacter
sp. SXCC-1]
gi|329761292|gb|EGG77785.1| putative chromosome-partitioning protein parB [Gluconacetobacter
sp. SXCC-1]
Length = 300
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 109/301 (36%), Positives = 183/301 (60%), Gaps = 7/301 (2%)
Query: 1 MSNNYS---KRRLGRGLAALIGE-VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRN 56
M + RLGRGLAAL+GE VN +P + + + + + + P P PR
Sbjct: 1 MMKTKKDAGRPRLGRGLAALLGEQVNMLPPAPAVEGRRVSDVIASLPVDVMEPGPFQPRQ 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIR 114
E E LE+L SI+ GI+QP++VR +Y+IIAGERR+RA+++A L +VPV IR
Sbjct: 61 QMEPEALEELASSIRVRGILQPILVRPHPGRAGIYQIIAGERRWRASQIAGLHDVPVHIR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+D+ ++ A+VEN+QR DLN +EEA G ++L+ +Y TQ+++ S +GKSR HVAN++R
Sbjct: 121 PLDDGDAMAAALVENLQRADLNAIEEAEGLQRLLDDYELTQDELASAIGKSRPHVANMVR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+L+LP+ VR+ +R + +S GHAR L++ +DP++ ++++++ ++VR TE L ++ +K
Sbjct: 181 LLQLPAPVRDAVRHQSLSAGHARALLAHADPVAALKIVLAQGLNVRQTEALARQ-QERKS 239
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + LE+ +++++GL + I G I Y + EQ + LL
Sbjct: 240 AAAREKAEKAARNPEIASLERDLAARLGLKVQISFDGRGGSIKIDYRSLEQFDGLLRLLQ 299
Query: 295 E 295
+
Sbjct: 300 Q 300
>gi|307823027|ref|ZP_07653257.1| parB-like partition protein [Methylobacter tundripaludum SV96]
gi|307735802|gb|EFO06649.1| parB-like partition protein [Methylobacter tundripaludum SV96]
Length = 287
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 100/295 (33%), Positives = 165/295 (55%), Gaps = 9/295 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR L RGL AL+G V+ D E + + I + + PR
Sbjct: 1 MA--VKKRGLNRGLDALLGNVS---DKDEHREIGDVHQLQTLPIEYMQRGKYQPRKDMNP 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK GIIQP++VR I Y+I+AGERR+RAA++A L +VPV+I+ +D+++
Sbjct: 56 EKLQELADSIKVQGIIQPVVVRKIAPEKYEIVAGERRWRAAQLAGLQQVPVVIKEIDDRA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ IA++EN+QR+DLNPLEEA +L+ E+ T + VGKSR+ V N+LR++ L
Sbjct: 116 AMAIALIENIQREDLNPLEEAEALRRLLDEFEMTHQQVADAVGKSRATVTNLLRLIDLHP 175
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V++++ ++ +GHAR L+S P +A + E+ K + +
Sbjct: 176 EVKKLLINRQLEMGHARALLSLDGPKQVAAAHKIVR---DGLTVRAAERLVKDSQAEHKT 232
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+RE +K L++ +++K+G + I+H+ N G+ I Y + E+L I +
Sbjct: 233 PKTREIDKDTLRLQEDLTAKLGAKVLIEHKENGTGKLVIAYSSLEELDGILGQIK 287
>gi|212637841|ref|YP_002314366.1| ParB-like partition protein [Shewanella piezotolerans WP3]
gi|212559325|gb|ACJ31779.1| ParB-like partition protein [Shewanella piezotolerans WP3]
Length = 295
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 101/296 (34%), Positives = 179/296 (60%), Gaps = 13/296 (4%)
Query: 6 SKRRLGRGLAALIGEVNQS-----IDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
KR LG+GL AL+ + + + E + + + + I + P + PR +
Sbjct: 4 KKRGLGKGLDALLSTSHAASKRLEPKANEGEQDIKNDDLITLDIDRLQPGKYQPRKDMST 63
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L +SI++ G+IQP++VR + Y+IIAGERR+RA+++A L+++P I++ V +++
Sbjct: 64 EALEELAESIRAQGVIQPIVVRKVSAEGYEIIAGERRWRASQLAGLTQIPCIVKQVPDEA 123
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ IA++EN+QR+DLN +EEA+ +LI E+ T I VGKSR+ V+N+LR+ L
Sbjct: 124 AVAIALIENIQREDLNAMEEAIALNRLIEEFELTHQQIADAVGKSRATVSNLLRLNGLNE 183
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ +I +GH R L + + +LA+++VSK+++VR+TE LV + N+ E +K
Sbjct: 184 PVKRMLEYGDIDMGHGRALLAIEGDEQTNLARLVVSKELTVRETERLVNKTLNQTEIVEK 243
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
K+ + LE ++ ++G +S+ H + KG+ I Y+ +L+ I S +
Sbjct: 244 -----PAKDHDVVRLESQLIERLGAKVSLTHNKKGKGKMVINYQNLAELEGIISKI 294
>gi|146297968|ref|YP_001192559.1| parB-like partition protein [Flavobacterium johnsoniae UW101]
gi|146152386|gb|ABQ03240.1| parB-like partition protein [Flavobacterium johnsoniae UW101]
Length = 302
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 105/301 (34%), Positives = 167/301 (55%), Gaps = 7/301 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDS-PEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I S +K + + + + I +I NP PR+ F
Sbjct: 1 MTKAIKKQALGRGLSALLKDPENDIKSVEDKNADKVVGNIIELEISAIEINPFQPRSNFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SIK G+IQP+ VR +D Y++I+GERR RA+ + L+ VP IR ++
Sbjct: 61 EESLRELATSIKELGVIQPITVRKLDFNKYQLISGERRLRASTLIGLTHVPAYIRIANDN 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SL +A+VEN+QR DL+P+E AL Y++LI E TQ + VGK RS ++N LR+LKL
Sbjct: 121 ESLVMALVENIQRHDLDPIEIALSYQRLIDEIQLTQEQMSERVGKKRSTISNYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ IR IS+GH R +++ D + Q IVS+ +SVR+TE LV+ ++ +
Sbjct: 181 PIIQTGIRDGFISMGHGRAIINIEDLDVQTDIYQKIVSQNLSVRETEALVKNYHEGQQPK 240
Query: 237 KKIFEGSREKEKYLTDLEKK--ISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
++ ++ ++ +K + G + IK N KG+ I + + I L+
Sbjct: 241 EEGEGKAKPDSAFIVRETQKNTFNDYFGSKVDIKVAGNGKGKITIPFNSEADFNRIIKLI 300
Query: 294 G 294
Sbjct: 301 N 301
>gi|197106981|ref|YP_002132358.1| chromosome partitioning protein ParB [Phenylobacterium zucineum
HLK1]
gi|196480401|gb|ACG79929.1| chromosome partitioning protein ParB [Phenylobacterium zucineum
HLK1]
Length = 291
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 116/295 (39%), Positives = 165/295 (55%), Gaps = 9/295 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N +R LGRGL+AL+GE + + I I I NP PR +F
Sbjct: 1 MAEN--RRGLGRGLSALLGEAEEI-----EHAGDPTAGVREIPIELIHRNPDQPRVHFAE 53
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SI+ G++QP++VR Y+I+AGERR+RA + + L +P ++RNV +
Sbjct: 54 AELAELEASIRDKGVLQPILVRPSPKAPGEYEIVAGERRWRATQRSGLRTIPALVRNVAD 113
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ + EIAIVENVQR DLN +EEA Y L+ GYTQ VGKSRSHVAN LR+L+L
Sbjct: 114 EIAFEIAIVENVQRADLNAMEEARAYRSLMGRMGYTQEQAAEKVGKSRSHVANTLRLLQL 173
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V++ + +S GHAR L+ +P +LA+ I+ K +SVRD E L + KK
Sbjct: 174 PEGVQQHVVLGRLSAGHARALLGAENPEALAEQILEKGLSVRDAEALAKPGAAAGGAAKK 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
R K+ + LE + +G+++ I R G+ I+Y + EQL IC L
Sbjct: 234 ASGPKRSKDADTSALEADLEDALGMSVDIADRGGAGELKIRYASLEQLDEICRRL 288
>gi|167648982|ref|YP_001686645.1| parB-like partition protein [Caulobacter sp. K31]
gi|167351412|gb|ABZ74147.1| parB-like partition protein [Caulobacter sp. K31]
Length = 297
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 122/298 (40%), Positives = 174/298 (58%), Gaps = 10/298 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS +R LGRGL+AL+GEV ++P + I I NP PR F
Sbjct: 1 MSE--GRRGLGRGLSALLGEVE---NAPAQAPGDAVGGSREAPIELIRRNPDQPRRTFRE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ L +L SI+ G++QP++VR G Y+I+AGERR+RAA+ A L +P+++R +D+
Sbjct: 56 DDLVELSDSIREKGVLQPILVRPAPGAPGEYQIVAGERRWRAAQRAGLKTIPIMVRELDD 115
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ LEI I+ENVQR DLN +EEAL Y+ L+ ++ TQ I VGKSRSHVAN LR+L L
Sbjct: 116 LAVLEIGIIENVQRADLNAIEEALSYKVLMDKFARTQEAIAQTVGKSRSHVANTLRLLAL 175
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P +V+ + E++ GHAR + S DP +LA+ ++ K +SVRDTE L + N +
Sbjct: 176 PDAVQSYLTSGELTAGHARAIASAPDPTALAREVIDKGLSVRDTEALARRTPNADGGVRA 235
Query: 239 IF---EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
R K+ LE +SS +GL++ I HR G I+Y T EQL +C+ L
Sbjct: 236 KSAGGRPPRGKDTDTQALESDLSSVLGLDVEIDHRGGAGALTIRYVTLEQLDDLCNRL 293
>gi|299135912|ref|ZP_07029096.1| parB-like partition protein [Acidobacterium sp. MP5ACTX8]
gi|298602036|gb|EFI58190.1| parB-like partition protein [Acidobacterium sp. MP5ACTX8]
Length = 304
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 103/303 (33%), Positives = 169/303 (55%), Gaps = 9/303 (2%)
Query: 1 MSN--NYSKRRLGRGLAALIGEVNQSIDSP---EKKTETIPESQDCISIHSIVPNPHNPR 55
MS + +R LG+GL +L+ + P E T + I + I NP R
Sbjct: 1 MSTTHDPKRRALGKGLESLLPSRPAATPPPVKVEASPATPSGTPLEIPVELIDRNPFQTR 60
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
+F+ L +L SI S G++QP++VR +G Y +I GERR A+K A + +P I+R
Sbjct: 61 THFDEAKLVELAGSIASSGVVQPIVVRQGKDGRYTLIMGERRLLASKKAGKATIPAIVRE 120
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
V N ++E+ IVEN+QR DLNP+E+A YE+L ++ TQ + + GK R+ ++N LR+
Sbjct: 121 VSNVQAMEMTIVENLQRADLNPMEQARAYERLSRDFQMTQEQMATRTGKDRTSISNFLRL 180
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNK 232
LKLP SV++ + E+S GHAR L++ P ++ AQ +++ +SVR TE VQ N
Sbjct: 181 LKLPESVQKSVEAGELSFGHARVLLALDSPEAIAAAAQKVLALHLSVRMTENYVQGIMN- 239
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
E + K + + + + ++++ +GL +SI+ + +G+ I+Y E I +
Sbjct: 240 PESKVKADKPVVPVDPNVKEAQEQLRRSLGLKVSIEDKKGRGRVIIEYSGVEDFDAILTA 299
Query: 293 LGE 295
LG+
Sbjct: 300 LGD 302
>gi|315644285|ref|ZP_07897455.1| parB-like partition protein [Paenibacillus vortex V453]
gi|315280660|gb|EFU43949.1| parB-like partition protein [Paenibacillus vortex V453]
Length = 279
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 105/289 (36%), Positives = 172/289 (59%), Gaps = 16/289 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLG+GL ALI ++ D + I + + NP+ PR F E +++L
Sbjct: 3 KRLGKGLDALIPSLSIHDD----------DKVVEIPLSQLRANPYQPRKTFNDEAIQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI+ HG+IQP+IVR++ Y+IIAGERRFRA++ + VP ++R+ ++ +EIA++
Sbjct: 53 ESIRQHGVIQPIIVRSV-LKGYEIIAGERRFRASQYCGKATVPAVVRSFSDQQVMEIALI 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR++LN +E A+ Y+ L+ ++ TQ ++ VGKSRSH+AN LR+L LP V+E +
Sbjct: 112 ENLQRENLNAMEIAVAYQGLMEQFSLTQEELSLKVGKSRSHIANFLRLLSLPEEVKENVS 171
Query: 188 KEEISLGHARTLVSTSDP---LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ +S+GHAR +V DP LA+ V ++ SVR+ EE V+ D K + K R
Sbjct: 172 RGTLSMGHARAIVGIKDPILVKQLAKQCVEQEWSVRELEEAVKNLDRKPADKAKAKVKKR 231
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ Y+ LE+ + + + IKH +KG+ + Y + + L+ + LL
Sbjct: 232 --DPYIDHLEEDLRERFKTTVKIKHNKDKGKIELNYYSRQDLERLLELL 278
>gi|332291104|ref|YP_004429713.1| parB-like partition protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169190|gb|AEE18445.1| parB-like partition protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 301
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 102/299 (34%), Positives = 164/299 (54%), Gaps = 6/299 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE-KKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I S E K + + + + + I NP PR F
Sbjct: 1 MAKATKKQALGRGLSALLKDPENDIKSAEDKNADKVVGNIIELDLGDIDVNPFQPRTSFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SI+ G+IQP+ VR + G Y++++GERR+RA+K+ + +P IR ++
Sbjct: 61 EETLRELASSIRELGVIQPITVRKMSFGKYQLVSGERRYRASKLIGNATIPAYIRIANDN 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SL +A+VEN+QR+DL+P+E AL Y++LI E TQ + VGK+RS + N LR+LKL
Sbjct: 121 ESLTMALVENIQRQDLDPIEIALSYQRLIDEINLTQEQMSDRVGKNRSTITNYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+ +R +S+GH R L++ D + I+ +K+SVR TE LV+ +
Sbjct: 181 PIVQTGMRDGFLSMGHGRALINVDDTSDQLDIYEKILQEKLSVRQTEALVKNY-HATSNV 239
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ E E K++ K + G + IK +N +G+ I + + E + L+
Sbjct: 240 ETPTEQKEETPKFIKKGTKDFAEYFGAKVDIKVAKNGRGKISIPFSSEEDFNRLQKLIK 298
>gi|189347534|ref|YP_001944063.1| parB-like partition protein [Chlorobium limicola DSM 245]
gi|189341681|gb|ACD91084.1| parB-like partition protein [Chlorobium limicola DSM 245]
Length = 298
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 158/298 (53%), Gaps = 4/298 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPE-SQDCISIHSIVPNPHNPRNYFE 59
M + SK+ LG+GL ALI + +++ E + E S + + I NP PR F
Sbjct: 1 MMVDMSKKALGKGLKALIPDEGFVSSPKDEEQEPVNEGSIGSLPVEKIRANPFQPRKEFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDN 118
LE+L SI +G+IQP+ V D Y++I+GERR RA A +P I ++
Sbjct: 61 ETALEELKNSIIENGVIQPVTVCR-DGDGYQLISGERRLRAVTQAGFKYIPAYIIEAPED 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
S LE+A++EN+QR+DLN +E AL + L ++ TQ++I VGK+RS V+N LR+LKL
Sbjct: 120 SSKLELALIENIQREDLNAIEVALALKSLTTKCRLTQDEIAQKVGKNRSTVSNFLRLLKL 179
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P ++++ IR I+ GHAR L++ + + + +++ K
Sbjct: 180 PMAIQDSIRNRVITSGHARALINLPGESQQIKAWKQIVSRQLSVRQTEMLVNRMFKEQPK 239
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ E + ++ LE ++ ++ + I+ + KG+ I+Y +++ L I L+GE
Sbjct: 240 LTEVQAKPSPHINQLETRLRGRLATKVKIIEKKTGKGEIHIQYFSHDDLDRILDLMGE 297
>gi|302340761|ref|YP_003805967.1| parB-like partition protein [Spirochaeta smaragdinae DSM 11293]
gi|301637946|gb|ADK83373.1| parB-like partition protein [Spirochaeta smaragdinae DSM 11293]
Length = 297
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 109/298 (36%), Positives = 175/298 (58%), Gaps = 9/298 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SK+ LGRG+ ALI + + S++ PE+ + + + I NP PR +F+ E L
Sbjct: 1 MSKKALGRGIEALIHQADDSLELPEE----LKGDVSSLPLRKIRTNPDQPRKHFDEEALR 56
Query: 65 DLCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
+L SI++ G+IQP+IV ++GL+ I+AGERRFRAA++A L+E+PVIIR + LE
Sbjct: 57 ELADSIRNQGVIQPIIVDEESEHGLHTIVAGERRFRAARLAGLNEIPVIIRAFSEEDKLE 116
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
I++VENVQR+DLNP+EEA Y L+ +Q+ + VGK RS VAN LR+LKLP V+
Sbjct: 117 ISLVENVQREDLNPIEEAQAYRHLMEAMNLSQDAVAKKVGKKRSTVANSLRLLKLPEDVQ 176
Query: 184 EMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQ-DNKKEKRKKI 239
+ + K E++ GHAR ++++ +D L I+ +SVR+TE+ + +K
Sbjct: 177 DSLVKGELTAGHARAILSVLNPADQRILYGRILQHGLSVRETEDQASALNKGMRATEQKE 236
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ + L +E+K +G ++I+ KG+ I Y + + L+ + ++ D
Sbjct: 237 EKNPANRAPELRSIEQKFLDALGTKVTIRGSLKKGKIEIAYYSMDDLERLFDIISNRD 294
>gi|332654798|ref|ZP_08420540.1| stage 0 sporulation protein J [Ruminococcaceae bacterium D16]
gi|332516141|gb|EGJ45749.1| stage 0 sporulation protein J [Ruminococcaceae bacterium D16]
Length = 297
Score = 159 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 113/297 (38%), Positives = 173/297 (58%), Gaps = 15/297 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+G+ + E + I + P + PR F+
Sbjct: 1 MAKRKTDLGLGRGLNALLGDP---------ELPAQGEGSISLPISQVEPGLNQPRKRFDP 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L DL +SI+ HGIIQPL VR + +G Y+IIAGERR+RAAK A L+EVP +I D++
Sbjct: 52 ETLSDLAESIRVHGIIQPLTVRRLASGYYQIIAGERRWRAAKQAGLTEVPAVIIEADDRK 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+ ++EN+QR+DLNP EEA GY+ L+ EYG TQ + +GKSR +AN LR+L LP
Sbjct: 112 VMELGLIENLQREDLNPAEEARGYQVLMEEYGLTQEQVAEEMGKSRPAIANTLRLLALPE 171
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ +++ + +S GHAR + + + A+ +++ +SVR TE LV +++
Sbjct: 172 DLLKLVEEGTLSAGHARAILGAPTQAMQRQAAKQVIAHGLSVRQTESLV---KALQKQPA 228
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + E YL +LEK +SS +G ++I H KG+ ++Y E L+ + SLL
Sbjct: 229 EKKAANDEIALYLGELEKSLSSNLGRKVTISHHGKKGKIQLEYYNPEDLEALLSLLN 285
>gi|163756811|ref|ZP_02163920.1| chromosome partitioning protein [Kordia algicida OT-1]
gi|161323200|gb|EDP94540.1| chromosome partitioning protein [Kordia algicida OT-1]
Length = 301
Score = 159 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 109/301 (36%), Positives = 168/301 (55%), Gaps = 6/301 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDS-PEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I S +K + + + ++I +I NP PR F
Sbjct: 1 MAKATKKQALGRGLSALLKDPENDITSVSDKNADKVVGNIVELAIGTIEVNPFQPRTNFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SIK G+IQP+ VR + Y++++GERRFRA+K+ L +P +R +++
Sbjct: 61 EETLRELASSIKELGVIQPITVRKLGFEKYQLVSGERRFRASKLIGLETIPAYVRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR DL+P+E AL Y++LI E TQ + VGK RS +AN LR+LKL
Sbjct: 121 ESLEMALVENIQRADLDPIEIALSYQRLIDEISLTQEQMSQRVGKKRSTIANYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ +R +S+GH R LV+ + ++I+SK +SVRDTEE+V+ K
Sbjct: 181 PIIQTGMRDGFLSMGHGRALVNIENTNDQLEIYEMILSKSLSVRDTEEMVKNYKKDKTID 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
I E K++ + S G + +K +N KG+ I + + E I LL
Sbjct: 241 APITE-KENVPKFVKKGIRDFSEYFGHKVDVKVGKNGKGKITIPFHSEEDFSRIKKLLKS 299
Query: 296 N 296
Sbjct: 300 G 300
>gi|225181156|ref|ZP_03734602.1| parB-like partition protein [Dethiobacter alkaliphilus AHT 1]
gi|225168125|gb|EEG76930.1| parB-like partition protein [Dethiobacter alkaliphilus AHT 1]
Length = 282
Score = 159 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 111/292 (38%), Positives = 169/292 (57%), Gaps = 14/292 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SK+RLG+GL ALI E+ + S + + I NP+ PR +F+ E L
Sbjct: 1 MSKKRLGKGLQALIPEIEDTPLSDA----------VDVDVAQISVNPYQPRKHFDEEKLA 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +S++ HGI+QPLIVR D Y+++AGERR RAAK A L VPV+IR + +K +EI
Sbjct: 51 ELARSVEQHGILQPLIVRPSDGE-YELVAGERRLRAAKKAGLQRVPVVIRPLTDKEMMEI 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNPLEEA Y++L+ E+ YTQ + VGKSRS VAN LR+ L R
Sbjct: 110 ALIENLQRQDLNPLEEAQAYQRLMEEFNYTQEQLAERVGKSRSAVANTLRLTALHPEARN 169
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ +++S GHAR + + A+ V +SVRDTE + ++ KK RK
Sbjct: 170 FVANQQLSEGHARAILSLPLEKQPLAARKAVELGLSVRDTERMAGQEPKKKAARKPRAAT 229
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ Y+ DLE ++ G ++++ G+ I++ ++L+ +C +L
Sbjct: 230 GGATDSYIADLEDRLRQVCGTAVNVRMSAKGGGKLEIQFYDLDELERVCEIL 281
>gi|87198159|ref|YP_495416.1| chromosome segregation DNA-binding protein [Novosphingobium
aromaticivorans DSM 12444]
gi|87133840|gb|ABD24582.1| chromosome segregation DNA-binding protein [Novosphingobium
aromaticivorans DSM 12444]
Length = 315
Score = 159 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 112/303 (36%), Positives = 184/303 (60%), Gaps = 11/303 (3%)
Query: 7 KRRLGRGLAALIGEVNQSID--------SPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
+ LGRGL AL+GEV + E +++ SI P+P PR +F
Sbjct: 13 RTGLGRGLGALMGEVRREEPIVRISVSGESATGGEVRDGGLALLAVGSIEPHPEQPRRHF 72
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ E LE+L QSI + G+IQP++VR + Y+++AGERR+RAA+ A + E+P I+R +++
Sbjct: 73 DEEALEELAQSIAARGVIQPVVVRPLGGNRYQLVAGERRWRAAQKAQVHEIPAIVRKLND 132
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +A++EN+QR+DLNP+EEA Y++L G TQ +I V KSRSHVAN++R+L L
Sbjct: 133 RDVAALALIENLQREDLNPVEEAKAYQRLADSEGLTQAEIAKFVDKSRSHVANMMRLLGL 192
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V +M+ ++E+S+GHAR+L++ DP LA+ IV K +SVR+ E+LV++ + R++
Sbjct: 193 PDDVLDMVVRDELSMGHARSLINAPDPAGLAREIVGKGLSVREAEKLVRKASRPESGRRQ 252
Query: 239 IFEGS-REKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLGE 295
E + + +++ + +GL ++I + G I+Y+ +QL +IC L
Sbjct: 253 AREAKDPFGQADIAAIQQHLEDFLGLKVTINADADPTTGAVTIRYKNLDQLDLICQRLTG 312
Query: 296 NDF 298
+F
Sbjct: 313 GEF 315
>gi|88811301|ref|ZP_01126557.1| chromosome partitioning protein Spo0J [Nitrococcus mobilis Nb-231]
gi|88791840|gb|EAR22951.1| chromosome partitioning protein Spo0J [Nitrococcus mobilis Nb-231]
Length = 289
Score = 159 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 98/297 (32%), Positives = 176/297 (59%), Gaps = 11/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+N +R LGRGL AL+ V + + + E I + + + PR+ F+
Sbjct: 1 MTN--KRRGLGRGLDALLKNVPEEQSNIQPVAEH--GELRQIPLDLLQRGRYQPRSSFDP 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR +G Y+IIAGERR+RAA++A + VP ++R++ +++
Sbjct: 57 AALQELADSIRAQGVVQPIVVRPAHDGRYEIIAGERRWRAAQLAGIDGVPALVRDLPDEA 116
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA ++L SE+G T ++ + VG+SR+ V+N+LR+L+L
Sbjct: 117 VVAVALIENIQREDLNPLEEAGALQRLTSEFGMTHQEVANAVGRSRAAVSNLLRLLELAE 176
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ +I + +GHAR L + S + A +++K++SVR+TE LV+ +
Sbjct: 177 EVKSLIDARRLEMGHARALLALEPSRQVEAAHRVIAKELSVRETEALVRRLLEYRASPPI 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
+ + L+ +S+++G + I+H KG+ I+Y + E+L I +
Sbjct: 237 AAAS----DPNVRRLQDDLSARLGAEVCIQHGKAGKGRMIIRYNSVEELDGILERIK 289
>gi|322437340|ref|YP_004219552.1| parB-like partition protein [Acidobacterium sp. MP5ACTX9]
gi|321165067|gb|ADW70772.1| parB-like partition protein [Acidobacterium sp. MP5ACTX9]
Length = 301
Score = 159 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 93/299 (31%), Positives = 159/299 (53%), Gaps = 12/299 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S + +R LG+GL +L+ + P I + I NP R F+
Sbjct: 4 SPDPKRRALGKGLESLLPSLKAEAAPPST------GKPLEIPVGLIDRNPFQTRTTFDEA 57
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L +L QSI + G++QP++VR + Y++I GERR A+K A + +P I+R V ++ +
Sbjct: 58 KLTELAQSIAASGVVQPIVVRVLPGDRYQLITGERRLIASKQAGKATIPAIVREVSDEQA 117
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+ IVEN+QR DLNP+E+A Y +L ++ TQ + + GK R+ V N LR+LKLP +
Sbjct: 118 MEMTIVENLQRADLNPMEQARAYHRLSHDFKMTQEQMATRTGKDRASVGNFLRLLKLPET 177
Query: 182 VREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ + ++S GHARTL+ S S AQ +++ MSVR TE + N + + K
Sbjct: 178 IQARVEAGDLSFGHARTLLGLGSPEQIASAAQKVMALSMSVRQTETYIHGLMNPESRPGK 237
Query: 239 IFEGSRE---KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + ++ + + + ++ +GL + I+ + KG+ I+Y E + + L
Sbjct: 238 LEKQQIAEAGQDPNVHEAQTRLQRSLGLRVKIEDKKGKGKVIIEYANLEDFDALLTALN 296
>gi|86134028|ref|ZP_01052610.1| chromosome partitioning protein parB [Polaribacter sp. MED152]
gi|85820891|gb|EAQ42038.1| chromosome partitioning protein parB [Polaribacter sp. MED152]
Length = 294
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 103/297 (34%), Positives = 166/297 (55%), Gaps = 8/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL+AL+ E + +K + + + I + +I NP+ PR YF+
Sbjct: 1 MAKATKKQALGRGLSALLQESPNINSASDKNADKLVGNIIEIELSAIEVNPYQPRTYFDE 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L SIK G+IQP+ VR ++ +++++GERRFRA+K+ VP IR +++
Sbjct: 61 EALRELASSIKELGVIQPITVRKLEGNKFQLVSGERRFRASKLIGNKTVPAYIRIANDQE 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A+VEN+QRK+L+P+E AL Y++LI E TQ ++ + VGK RS V N LR+LKL
Sbjct: 121 MLEMALVENIQRKNLDPIEVALSYQRLIDEIQLTQEELSTRVGKKRSTVTNYLRLLKLDP 180
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ +R IS+GH R +++ + + I+ +K+SVR TEELV+ K
Sbjct: 181 ILQTGMRDGFISMGHGRAMINVDNTEDQLAIYEKILREKLSVRQTEELVKSLKTGKV--- 237
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ ++ + ++ + G I I N KG+ I + + E I LL
Sbjct: 238 -TKPKKKTIPAFVKNNKQTFNDFFGHKIDISVGSNGKGKITIPFHSEEDFNRIKKLL 293
>gi|163751414|ref|ZP_02158639.1| ParB family protein [Shewanella benthica KT99]
gi|161328717|gb|EDP99865.1| ParB family protein [Shewanella benthica KT99]
Length = 297
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 176/301 (58%), Gaps = 13/301 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDS-----PEKKTETIPESQDCISIHSIVPNPHNPR 55
M KR LG+GL AL+ + + + + ++I + P + PR
Sbjct: 1 MEMTLKKRGLGKGLDALLSTSHAASKKLYLAEEAAEVTVKTDDLLMLAIDLMQPGKYQPR 60
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
E LE+L +SIK+ GIIQP++VR + +++IIAGERR+RAA++A L +VP I++
Sbjct: 61 KDMSLEALEELAESIKAQGIIQPIVVRKVSATMFEIIAGERRWRAAQIAKLDKVPCIVKQ 120
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
V +++++ I+++EN+QR+DLN +EEA+ E+L+ E+ T I + VGKSR+ V+N+LR+
Sbjct: 121 VADEAAIAISLIENIQREDLNAMEEAIALERLMREFDLTHQQIATAVGKSRATVSNLLRL 180
Query: 176 LKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
L V+ M+ +I +GHAR L + + ++A+++ +K+++VR+TE LV + N
Sbjct: 181 NGLNEPVKRMLENGDIDMGHARALLAIEGDEQTNVARLVAAKELTVRETERLVSKTLNPP 240
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSL 292
+ K K+ +T LE + ++G +SI H + KG+ I Y+ +L I +
Sbjct: 241 KITDKPV-----KDYDVTRLEGLLVERLGAKVSITHNKKGKGKLIINYQDLAELDGIITK 295
Query: 293 L 293
+
Sbjct: 296 I 296
>gi|298293752|ref|YP_003695691.1| parB-like partition protein [Starkeya novella DSM 506]
gi|296930263|gb|ADH91072.1| parB-like partition protein [Starkeya novella DSM 506]
Length = 305
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 122/300 (40%), Positives = 188/300 (62%), Gaps = 7/300 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP-EKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + + RLGRGLAALIG++++ + ++ + + + PNP NPR F
Sbjct: 3 MAEDGGRSRLGRGLAALIGDMSEDAGAANDRGGRPSGGGARKVPLAFLAPNPRNPRRSFV 62
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E LEDL SI GIIQP++VR + + Y+I+AGERR+RAA+ A + EVP+++ V+
Sbjct: 63 EEDLEDLAASIHERGIIQPIVVRQVAGERDAYEIVAGERRWRAAQRAGIHEVPIVVVEVN 122
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ +LEIAI+ENVQR DLNPLEEA GY+ L ++GY+QND+ ++GKSRSHVAN +R+L+
Sbjct: 123 DREALEIAIIENVQRADLNPLEEAAGYQALSDQFGYSQNDLAKVIGKSRSHVANTMRLLR 182
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD----NKK 233
LP +V+ + +S GHAR L++ DP +LA+ IV + M+VR E L QE +
Sbjct: 183 LPETVKTYLADGRLSAGHARALLTQDDPETLARAIVEQGMNVRAIEALAQELNVAKAEAA 242
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + + + L++K+S ++GL + +KH G+ I+Y + +QL +C L
Sbjct: 243 GKPARKAKAIPALDADTAALQRKLSDELGLQVVLKHNGEAGEIRIRYSSLDQLDEVCRRL 302
>gi|149911790|ref|ZP_01900394.1| ParB family protein [Moritella sp. PE36]
gi|149805136|gb|EDM65158.1| ParB family protein [Moritella sp. PE36]
Length = 297
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 98/301 (32%), Positives = 170/301 (56%), Gaps = 13/301 (4%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTE------TIPESQDCISIHSIVPNPHNPRN 56
N KR LG+GL AL+G + + + T+ + I + P + PR
Sbjct: 1 MNVKKRGLGKGLDALLGTSAMARTKEQTADDLAQPIVTVENEFKKLPIEWLYPGKYQPRK 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ L++L SI + GIIQP++VR ++ ++IIAGERR+RAA++A LS+VP I+++V
Sbjct: 61 DMARDALDELAASITAQGIIQPIVVRELNPQQFEIIAGERRWRAAQLAGLSKVPCIVKDV 120
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+++ + ++++EN+QR+DLN +EE+ +LI E+ T + VGKSR+ V+N+LR+
Sbjct: 121 ADEAVMAMSLIENIQREDLNAMEESTALLRLIEEFSLTHQQVADAVGKSRASVSNLLRLN 180
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L + V+ ++ +I +GHAR L + A I + ++VRDTE+LV++ K
Sbjct: 181 SLNNDVKTLLEHGDIEMGHARALLALEGELQSQAASNIAQRGLTVRDTEKLVRKLLEPKA 240
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ I + K+ + +LE ++S ++ + IK N G+ I Y + +L I + L
Sbjct: 241 EISPI----KVKDPDVVNLEYRLSERLKAKVIIKQGANGCGKLTIDYTSLAELDDIVATL 296
Query: 294 G 294
G
Sbjct: 297 G 297
>gi|255262364|ref|ZP_05341706.1| chromosome-partitioning protein ParB [Thalassiobium sp. R2A62]
gi|255104699|gb|EET47373.1| chromosome-partitioning protein ParB [Thalassiobium sp. R2A62]
Length = 295
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 114/299 (38%), Positives = 189/299 (63%), Gaps = 10/299 (3%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + + R LGRGL+AL+ +V ++D+ + ++ +S + I ++ PNP PR F+
Sbjct: 1 MAKSSNNNRGLGRGLSALMADVAPNVDTDQ--NDSPAKSDLTVPIEAVFPNPDQPRRSFD 58
Query: 60 SEGLEDLCQSIKSHGIIQPLIVR-AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L++L +SI+ GIIQP++VR A +G Y+I+AGERR+RAA+ A L +VPV++R+ +
Sbjct: 59 DAALQELAESIREKGIIQPIVVRLAKKDGQYEIVAGERRWRAAQRAKLHQVPVVVRSFSD 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ LE+AI+EN+QR DLN ++EA G+ QL+ +YG+TQ + ++GKSRSH+AN +R+L L
Sbjct: 119 QEMLEVAIIENIQRADLNAIDEAAGFAQLVEKYGHTQEQLSQVLGKSRSHIANQMRLLSL 178
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+ ++ + ++S GHARTL+ + L+LA+ I+SK +SVR E L K K
Sbjct: 179 PQDVQALVEEGKLSAGHARTLIGSDQALTLAKTIISKGLSVRGAERLT---KAPKVSTKG 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN---NKGQFCIKYETNEQLKIICSLLG 294
+ K+ LE ++S+ +G+ ++I+ N G + Y+ +QL + S L
Sbjct: 236 RASKTLTKDADTVALEGELSANLGVAVTIEQSNLESGAGNLVLSYKNLDQLDDLLSKLS 294
>gi|269103810|ref|ZP_06156507.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163708|gb|EEZ42204.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Photobacterium damselae subsp. damselae CIP
102761]
Length = 293
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 101/298 (33%), Positives = 182/298 (61%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVN----QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL + + + + +T + + +++ + + PR
Sbjct: 1 MSKRGLGKGLDALFATSSVALAKQQAANQAQTLSNDGALRELAVSQLQSGKYQPRKDMAD 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L +SI++ GIIQP+IVR + N ++IIAGERR+RAA+ A L +VP I+++VD+++
Sbjct: 61 EALAELTESIRAQGIIQPIIVRELTNTHFEIIAGERRWRAARQAGLKQVPCIVKSVDDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ IA++EN+QR+DLN +EEA E+L SE+ T + VGKSR+ V+N+LR+ +L +
Sbjct: 121 TMAIALIENIQREDLNVMEEAQALERLQSEFSLTHQQLAQAVGKSRTAVSNLLRLNQLAT 180
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ ++I +GHAR L++ +AQ++VSK ++VR+TE LV++Q +
Sbjct: 181 EVKHLVETKQIEMGHARALLALPIEQQLAIAQIVVSKALTVRETEALVKKQLE-----PQ 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + + +E ++S + G ++I K +N KG+ I ++ + +L+ I +G+
Sbjct: 236 VEAKKVTRNPVVEAIENRLSEQFGTPVAISKQKNGKGKIVISFDQDHELQQILDKIGQ 293
>gi|163787908|ref|ZP_02182354.1| chromosome partitioning protein [Flavobacteriales bacterium ALC-1]
gi|159876228|gb|EDP70286.1| chromosome partitioning protein [Flavobacteriales bacterium ALC-1]
Length = 300
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 110/299 (36%), Positives = 168/299 (56%), Gaps = 7/299 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE-KKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I S E K + + + + I SI NP PR F
Sbjct: 1 MAKATKKQALGRGLSALLKDPENDIKSAEDKNADKVVGNIVELDIESIEVNPFQPRTNFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SI+ G+IQP+ VR + Y++++GERRFRA+K+ L +P IR +++
Sbjct: 61 EESLRELASSIRELGVIQPITVRKLAFNKYQLVSGERRFRASKLIGLEAIPAYIRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E AL Y++LI E TQ + VGK RS +AN LR+LKL
Sbjct: 121 ESLEMALVENIQRQDLDPIEIALSYQRLIDEINLTQAQMSERVGKKRSTIANYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ +R IS+GH R +V+ + + I++ K+SVR TE+LV+ ++ E
Sbjct: 181 PIIQTGMRDGFISMGHGRAMVNIESQIDQLEVYEKIITNKLSVRATEQLVKNLNS--ETP 238
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
S E KY+ K+ S G I +K +N G+ I + + E I L+
Sbjct: 239 TSTESDSNETPKYIKKGVKEFSEYFGHKIDVKLAKNGSGKITIPFHSEEDFNRIKKLVK 297
>gi|304320463|ref|YP_003854106.1| ParB-like partition protein [Parvularcula bermudensis HTCC2503]
gi|303299365|gb|ADM08964.1| ParB-like partition protein [Parvularcula bermudensis HTCC2503]
Length = 299
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 161/300 (53%), Gaps = 17/300 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+++ LGRGL ++G+ Q P + I + I P+P+ PR F+ E LE
Sbjct: 1 MARKGLGRGLETILGDERQESTGPGE------GGVALIPVTDIAPDPYQPRKRFDDEALE 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKI-IAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
+L SI++ G++QP++VR IAGERR+RAA A L E+P +IR E
Sbjct: 55 ELAASIRTRGVLQPILVRPTPGEKGYTLIAGERRWRAAGRAGLHEIPALIREPAEGDVAE 114
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+A++ENVQR+DLNP+EEA Y +L YG T DI +GKSR HVAN+LR+ LP ++
Sbjct: 115 MALIENVQRQDLNPIEEADAYARLRDSYGRTAKDIAESIGKSRPHVANMLRLTGLPDDIK 174
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK------ 237
++ E+++GHAR L+S + P LA+ I+ + +SVR+ E +
Sbjct: 175 GLVSAGELTMGHARALLSAAAPAELAKQIIEEGLSVREAERRAAGKTASGASSHAQRGEG 234
Query: 238 ----KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + S K+ LE+ +++ +GL +SI H G + Y +QL +C L
Sbjct: 235 ENGKKAAKASGRKDADTRSLEEDLAATLGLEVSIDHHGKGGTLTVSYGDLDQLDDLCRRL 294
>gi|224823524|ref|ZP_03696633.1| parB-like partition protein [Lutiella nitroferrum 2002]
gi|224603979|gb|EEG10153.1| parB-like partition protein [Lutiella nitroferrum 2002]
Length = 284
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 97/293 (33%), Positives = 172/293 (58%), Gaps = 19/293 (6%)
Query: 5 YSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+K + LGRGL AL+ V+ + D + I SI P + PR + + L
Sbjct: 1 MAKLKGLGRGLDALLATVDGADDR-----------LQTLPIDSIRPGKYQPRTHMSEDAL 49
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
++L SI+ G+IQP++VR I G Y++IAGERR+RA++ A L++VP +I++V ++++L
Sbjct: 50 DELAASIRVQGVIQPVVVREIGLGDYELIAGERRWRASRKAGLADVPAVIKSVPDEAALA 109
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+A++EN+QR++L+P+EEA G ++LI E+G T VG+SRS V+N+LR+L LP V+
Sbjct: 110 MALIENIQRQELDPIEEARGLQRLIDEFGLTHEAAADAVGRSRSAVSNLLRLLALPEPVQ 169
Query: 184 EMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ + ++ +GHAR L+ + AQ +V + SVR+ E +Q + + +
Sbjct: 170 TLVHQGQLEMGHARALLPLEVIDQIALAQQVVEQGWSVREVERRIQRLNA----PRPEGK 225
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + L + +S +G +SI+H G+ I+Y + ++L ++ + L
Sbjct: 226 PQPRLDPDIQRLAETLSESLGAAVSIRHGARGHGKLTIEYASLDELDVVLAKL 278
>gi|254455789|ref|ZP_05069218.1| chromosome partitioning protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082791|gb|EDZ60217.1| chromosome partitioning protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 280
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 120/297 (40%), Positives = 173/297 (58%), Gaps = 21/297 (7%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+ K+ LGRGL++LIGE + ++ + + +VPN + PR F+
Sbjct: 1 MDKIKKGLGRGLSSLIGETRVEV------------QKNLLPVSDLVPNKYQPRKNFDEAN 48
Query: 63 LEDLCQSIKSHGIIQPLIVR--AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LEDL SIK G+IQP+IVR N ++IIAGERR+ AA+ A + +VPV+I D+
Sbjct: 49 LEDLTNSIKERGMIQPIIVRKSNNKNSKFEIIAGERRWLAAQKAGIYKVPVVITEADDLK 108
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
SLE AIVENVQR DLNPLEEA GY++LI E+ Y Q + +GKSRS++ N LRIL LP+
Sbjct: 109 SLEFAIVENVQRHDLNPLEEAQGYKRLIDEFSYDQEKVSKFIGKSRSYITNSLRILTLPN 168
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V ++I ++S GHA+ LV + +A I+ K+SVR E VQ K
Sbjct: 169 EVIKLIETNKLSTGHAKILVGLDNASFVANKIIENKLSVRQAENFVQLFKK------KRQ 222
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLGEN 296
+ K+ + LE + +K+GLN+ IK+ N NKG+ +Y+ +QL I ++ N
Sbjct: 223 KSKITKDANIIALELSVLNKIGLNVEIKNNNRNKGKISFEYKDLDQLNKIIDIIKSN 279
>gi|308181812|ref|YP_003925940.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|308047303|gb|ADN99846.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 295
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 174/303 (57%), Gaps = 19/303 (6%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S + + LGRG+ AL +VN+ E+ + + I NP+ PR F+
Sbjct: 3 SKDKDNKALGRGIGALFADVNEPAS---------EEAVVDLDLKDIHANPYQPRRTFDQT 53
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L SI+ G+ QP+IVR D Y+IIAGERRFRA+K+A + +P I+R+V +
Sbjct: 54 ALKELASSIEKSGVFQPIIVRQPDAELNKYEIIAGERRFRASKLAHQTTIPAIVRDVTEE 113
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+E+A++EN+QR+DL PLEEA Y+ L+ + TQ ++ +GKSR ++AN LR+L LP
Sbjct: 114 QMMEVAVLENLQREDLTPLEEAAAYDSLMKKLKLTQAEVSKRLGKSRPYIANYLRLLGLP 173
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPL---SLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V++ I+K ++S+G ARTL+S D LA+ +V M+VR E++V + + ++
Sbjct: 174 DGVKQYIQKGQLSMGQARTLLSLKDKTKLAPLAKRVVKDNMTVRQLEQIVARYNGESKEP 233
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK---GQFCIKYETNEQLKIICSLL 293
K K Y+ E+++ K G +SI+ + NK G+ I Y +NE L I +L
Sbjct: 234 AKKVAPK--KSPYIRASEEQLQEKFGTAVSIQTKANKADQGKIEIPYLSNEDLTRILEIL 291
Query: 294 GEN 296
N
Sbjct: 292 SIN 294
>gi|90962565|ref|YP_536481.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
salivarius UCC118]
gi|90821759|gb|ABE00398.1| Chromosome partitioning protein, DNA-binding protein [Lactobacillus
salivarius UCC118]
Length = 291
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 106/299 (35%), Positives = 165/299 (55%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + LGRG+ AL K+ + E + I I PNP+ PR F
Sbjct: 1 MASRS--KGLGRGIDALF--------QESKEEQQPDEQVVELEISEIRPNPYQPRKTFNE 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L +SIK G+ QP+IVR Y+IIAGERR+RA+K+A +E+P IIR + +
Sbjct: 51 EALEELAKSIKKSGVFQPIIVRKSSVKGYEIIAGERRYRASKLAKKTEIPAIIREFNEEQ 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DL PLEEA Y L+ + TQ + +GKSR ++AN LR+L LP
Sbjct: 111 MMEVAVLENLQREDLTPLEEAEAYNTLMEKLNLTQTQVSERLGKSRPYIANYLRLLGLPG 170
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M++ +S+G ART + + LA+ V + ++VR E+LV + + KK K+
Sbjct: 171 KVKLMLQDGSLSMGQARTLLAVKDEQKLIELAEKTVKEGLTVRQLEQLVAQINGKKPKKA 230
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK--HRNNKGQFCIKYETNEQLKIICSLLG 294
K E Y+ E + K G +++K ++ KG+ I Y + + I +L
Sbjct: 231 KKQANP--YEPYIKQTENLLQEKFGTKVAVKANSKSGKGKIEIDYLSIDDFNRIMDILK 287
>gi|288554596|ref|YP_003426531.1| stage 0 sporulation protein J [Bacillus pseudofirmus OF4]
gi|288545756|gb|ADC49639.1| stage 0 sporulation protein J [Bacillus pseudofirmus OF4]
Length = 283
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 112/291 (38%), Positives = 179/291 (61%), Gaps = 16/291 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+GL A E N E+ P+S I+I+ I PNP+ PR F + +++L
Sbjct: 3 KGLGKGLKAFFPEHN----------ESAPDSVQEIAINEIRPNPYQPRKLFSEKAIDELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI+SHGI+QP+I R Y+I+ GERRFRAA+ A L VPV++R +D + +E+A++
Sbjct: 53 ESIQSHGILQPIIARK-SIKGYEIVVGERRFRAAQKAGLKAVPVVVRELDEQKMMELALI 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ YE+L+ GYTQ + S +G SR H+AN +R+L+LP V+E I
Sbjct: 112 ENLQREDLNPIEEAMAYEKLMEHLGYTQEQLASRLGMSRPHIANHIRLLQLPKPVQEFIS 171
Query: 188 KEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ +S+GH R L+ D LA + I+++ +SVR+ EELV + +++ ++
Sbjct: 172 EGTLSMGHGRALLGVKDKQKLAVLVETIINESLSVREVEELVNKMNDR--VSRETSRKKI 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L + + + S+ G ++SIK NKG+ I Y + + L+ I +LL
Sbjct: 230 QLTPQLKEYQDTLRSRFGTSVSIKPGKNKGKIEIDYFSEDDLERILALLKS 280
>gi|226315521|ref|YP_002775417.1| stage 0 sporulation protein J [Brevibacillus brevis NBRC 100599]
gi|226098471|dbj|BAH46913.1| stage 0 sporulation protein J [Brevibacillus brevis NBRC 100599]
Length = 281
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 111/287 (38%), Positives = 169/287 (58%), Gaps = 11/287 (3%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
R LG+GL ALI E +SI+ I PNP+ PR FE +E+L
Sbjct: 3 RGLGKGLNALI----------TSNLIEEGEQVKEVSINEIRPNPYQPRKEFEQSAIEELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSIK HGIIQPLIVR Y+++AGERR RAAK+A L EVPV+++ ++ +EIA++
Sbjct: 53 QSIKEHGIIQPLIVRK-SIKGYELVAGERRLRAAKLAGLKEVPVVVKAYTDQQLMEIALI 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR++LNPLEEA Y++LIS + YTQ + +GKSR HVAN+LR+L+LP +R+M+
Sbjct: 112 ENLQRENLNPLEEAEAYDKLISHHDYTQEQLAQKIGKSRPHVANMLRLLQLPEKIRKMVS 171
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
E+S+GH+R L+ +D Q+ +L + R+ + S + E
Sbjct: 172 AAELSMGHSRALLGVTDKKVQQQLANDVVEKGLSVRQLEEIVKQLNVSRETKKKKSAKNE 231
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
L ++E+++ S+ G ++ IK + +G+ I + + E L+ I +L
Sbjct: 232 PVLIEMEERLRSRFGTSVKIKKGSKRGKIEIDFYSQEDLERIIEMLN 278
>gi|187933628|ref|YP_001887729.1| stage 0 sporulation protein J [Clostridium botulinum B str. Eklund
17B]
gi|187721781|gb|ACD23002.1| stage 0 sporulation protein J [Clostridium botulinum B str. Eklund
17B]
Length = 292
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 163/290 (56%), Gaps = 1/290 (0%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LG+GL ALI + E + + IS++ I + PR F+SE +
Sbjct: 2 VKKFGLGKGLGALIPDEIDENVKQENIIDNSKSNNMLISLNKIRSDKEQPRKAFDSEKIV 61
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK HGIIQPLIVR ++ + I+AGERR+RAAK+A L E+P I ++ +K LEI
Sbjct: 62 ELAQSIKQHGIIQPLIVRQVNKSEFVIVAGERRWRAAKIAGLKELPCITMDISDKDILEI 121
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+++EN+QR+DLNP+EEAL Y++L+ ++ TQ+++ + +GKSR +AN +R++ L V++
Sbjct: 122 SLIENIQREDLNPIEEALAYKKLLEDFRITQSELSNRIGKSRVTIANTMRLMNLDERVQQ 181
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ + I+ GH R L++ + + + EL + N K E R
Sbjct: 182 YLIEGIITEGHGRALLAIENSDLQYEFAQKVIDNKLSVRELERLIKN-ISVEKANKELLR 240
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E Y D+ ++ G ++I + NKG+ I+Y + E L+ I ++
Sbjct: 241 ELNPYYKDVRNQLQDYFGTKVNILDKKNKGKIEIEYYSEEDLQRILDIIN 290
>gi|29377739|ref|NP_816893.1| ParB family chromosome partitioning protein [Enterococcus faecalis
V583]
gi|227518146|ref|ZP_03948195.1| chromosome partitioning protein, DNA-binding protein [Enterococcus
faecalis TX0104]
gi|227555648|ref|ZP_03985695.1| chromosome partitioning protein, DNA-binding protein [Enterococcus
faecalis HH22]
gi|229547166|ref|ZP_04435891.1| chromosome partitioning protein, DNA-binding protein [Enterococcus
faecalis TX1322]
gi|229550736|ref|ZP_04439461.1| chromosome partitioning protein, DNA-binding protein [Enterococcus
faecalis ATCC 29200]
gi|255971515|ref|ZP_05422101.1| chromosome partitioning protein ParB [Enterococcus faecalis T1]
gi|255974465|ref|ZP_05425051.1| ParB family chromosome partitioning protein [Enterococcus faecalis
T2]
gi|256618562|ref|ZP_05475408.1| chromosome partitioning protein ParB [Enterococcus faecalis ATCC
4200]
gi|256761820|ref|ZP_05502400.1| chromosome partitioning protein ParB family [Enterococcus faecalis
T3]
gi|256854947|ref|ZP_05560308.1| chromosome partitioning protein ParB family [Enterococcus faecalis
T8]
gi|256957050|ref|ZP_05561221.1| chromosome partitioning protein ParB [Enterococcus faecalis DS5]
gi|256960914|ref|ZP_05565085.1| chromosome partitioning protein ParB [Enterococcus faecalis Merz96]
gi|256963948|ref|ZP_05568119.1| chromosome partitioning protein ParB [Enterococcus faecalis
HIP11704]
gi|257078727|ref|ZP_05573088.1| chromosome partitioning protein ParB [Enterococcus faecalis JH1]
gi|257081313|ref|ZP_05575674.1| ParB family chromosome partitioning protein [Enterococcus faecalis
E1Sol]
gi|257083971|ref|ZP_05578332.1| ParB family chromosome partitioning protein [Enterococcus faecalis
Fly1]
gi|257087801|ref|ZP_05582162.1| chromosome partitioning protein ParB family [Enterococcus faecalis
D6]
gi|257088446|ref|ZP_05582807.1| chromosome partitioning protein parB [Enterococcus faecalis CH188]
gi|257417388|ref|ZP_05594382.1| chromosome partitioning protein ParB [Enterococcus faecalis
AR01/DG]
gi|257418875|ref|ZP_05595869.1| chromosome partitioning protein parB [Enterococcus faecalis T11]
gi|257421310|ref|ZP_05598300.1| chromosome partitioning protein parB [Enterococcus faecalis X98]
gi|293384809|ref|ZP_06630654.1| spoOJ protein [Enterococcus faecalis R712]
gi|293388231|ref|ZP_06632750.1| spoOJ protein [Enterococcus faecalis S613]
gi|294781214|ref|ZP_06746561.1| ParB-like protein [Enterococcus faecalis PC1.1]
gi|300861576|ref|ZP_07107660.1| ParB-like protein [Enterococcus faecalis TUSoD Ef11]
gi|307268877|ref|ZP_07550242.1| ParB-like partition protein [Enterococcus faecalis TX4248]
gi|307273952|ref|ZP_07555162.1| ParB-like partition protein [Enterococcus faecalis TX0855]
gi|307277347|ref|ZP_07558445.1| ParB-like partition protein [Enterococcus faecalis TX2134]
gi|307284001|ref|ZP_07564171.1| ParB-like partition protein [Enterococcus faecalis TX0860]
gi|307286503|ref|ZP_07566602.1| ParB-like partition protein [Enterococcus faecalis TX0109]
gi|307289976|ref|ZP_07569902.1| ParB-like partition protein [Enterococcus faecalis TX0411]
gi|312901336|ref|ZP_07760617.1| ParB-like partition protein [Enterococcus faecalis TX0470]
gi|312902983|ref|ZP_07762172.1| ParB-like partition protein [Enterococcus faecalis TX0635]
gi|312908851|ref|ZP_07767790.1| ParB-like partition protein [Enterococcus faecalis DAPTO 512]
gi|312952969|ref|ZP_07771825.1| ParB-like partition protein [Enterococcus faecalis TX0102]
gi|312979506|ref|ZP_07791188.1| ParB-like partition protein [Enterococcus faecalis DAPTO 516]
gi|29345207|gb|AAO82963.1| chromosome partitioning protein ParB family [Enterococcus faecalis
V583]
gi|227074414|gb|EEI12377.1| chromosome partitioning protein, DNA-binding protein [Enterococcus
faecalis TX0104]
gi|227175225|gb|EEI56197.1| chromosome partitioning protein, DNA-binding protein [Enterococcus
faecalis HH22]
gi|229304169|gb|EEN70165.1| chromosome partitioning protein, DNA-binding protein [Enterococcus
faecalis ATCC 29200]
gi|229307748|gb|EEN73735.1| chromosome partitioning protein, DNA-binding protein [Enterococcus
faecalis TX1322]
gi|255962533|gb|EET95009.1| chromosome partitioning protein ParB [Enterococcus faecalis T1]
gi|255967337|gb|EET97959.1| ParB family chromosome partitioning protein [Enterococcus faecalis
T2]
gi|256598089|gb|EEU17265.1| chromosome partitioning protein ParB [Enterococcus faecalis ATCC
4200]
gi|256683071|gb|EEU22766.1| chromosome partitioning protein ParB family [Enterococcus faecalis
T3]
gi|256709460|gb|EEU24507.1| chromosome partitioning protein ParB family [Enterococcus faecalis
T8]
gi|256947546|gb|EEU64178.1| chromosome partitioning protein ParB [Enterococcus faecalis DS5]
gi|256951410|gb|EEU68042.1| chromosome partitioning protein ParB [Enterococcus faecalis Merz96]
gi|256954444|gb|EEU71076.1| chromosome partitioning protein ParB [Enterococcus faecalis
HIP11704]
gi|256986757|gb|EEU74059.1| chromosome partitioning protein ParB [Enterococcus faecalis JH1]
gi|256989343|gb|EEU76645.1| ParB family chromosome partitioning protein [Enterococcus faecalis
E1Sol]
gi|256992001|gb|EEU79303.1| ParB family chromosome partitioning protein [Enterococcus faecalis
Fly1]
gi|256995831|gb|EEU83133.1| chromosome partitioning protein ParB family [Enterococcus faecalis
D6]
gi|256997258|gb|EEU83778.1| chromosome partitioning protein parB [Enterococcus faecalis CH188]
gi|257159216|gb|EEU89176.1| chromosome partitioning protein ParB [Enterococcus faecalis
ARO1/DG]
gi|257160703|gb|EEU90663.1| chromosome partitioning protein parB [Enterococcus faecalis T11]
gi|257163134|gb|EEU93094.1| chromosome partitioning protein parB [Enterococcus faecalis X98]
gi|291077891|gb|EFE15255.1| spoOJ protein [Enterococcus faecalis R712]
gi|291082378|gb|EFE19341.1| spoOJ protein [Enterococcus faecalis S613]
gi|294451677|gb|EFG20132.1| ParB-like protein [Enterococcus faecalis PC1.1]
gi|295112315|emb|CBL30952.1| chromosome segregation DNA-binding protein [Enterococcus sp. 7L76]
gi|300849037|gb|EFK76790.1| ParB-like protein [Enterococcus faecalis TUSoD Ef11]
gi|306498970|gb|EFM68462.1| ParB-like partition protein [Enterococcus faecalis TX0411]
gi|306502376|gb|EFM71653.1| ParB-like partition protein [Enterococcus faecalis TX0109]
gi|306503372|gb|EFM72621.1| ParB-like partition protein [Enterococcus faecalis TX0860]
gi|306505981|gb|EFM75153.1| ParB-like partition protein [Enterococcus faecalis TX2134]
gi|306509260|gb|EFM78320.1| ParB-like partition protein [Enterococcus faecalis TX0855]
gi|306514793|gb|EFM83343.1| ParB-like partition protein [Enterococcus faecalis TX4248]
gi|310625289|gb|EFQ08572.1| ParB-like partition protein [Enterococcus faecalis DAPTO 512]
gi|310629110|gb|EFQ12393.1| ParB-like partition protein [Enterococcus faecalis TX0102]
gi|310633651|gb|EFQ16934.1| ParB-like partition protein [Enterococcus faecalis TX0635]
gi|311287688|gb|EFQ66244.1| ParB-like partition protein [Enterococcus faecalis DAPTO 516]
gi|311291569|gb|EFQ70125.1| ParB-like partition protein [Enterococcus faecalis TX0470]
gi|315026606|gb|EFT38538.1| ParB-like partition protein [Enterococcus faecalis TX2137]
gi|315030100|gb|EFT42032.1| ParB-like partition protein [Enterococcus faecalis TX4000]
gi|315033593|gb|EFT45525.1| ParB-like partition protein [Enterococcus faecalis TX0017]
gi|315036258|gb|EFT48190.1| ParB-like partition protein [Enterococcus faecalis TX0027]
gi|315143572|gb|EFT87588.1| ParB-like partition protein [Enterococcus faecalis TX2141]
gi|315148289|gb|EFT92305.1| ParB-like partition protein [Enterococcus faecalis TX4244]
gi|315151254|gb|EFT95270.1| ParB-like partition protein [Enterococcus faecalis TX0012]
gi|315153739|gb|EFT97755.1| ParB-like partition protein [Enterococcus faecalis TX0031]
gi|315155035|gb|EFT99051.1| ParB-like partition protein [Enterococcus faecalis TX0043]
gi|315158676|gb|EFU02693.1| ParB-like partition protein [Enterococcus faecalis TX0312]
gi|315163399|gb|EFU07416.1| ParB-like partition protein [Enterococcus faecalis TX0645]
gi|315165662|gb|EFU09679.1| ParB-like partition protein [Enterococcus faecalis TX1302]
gi|315168468|gb|EFU12485.1| ParB-like partition protein [Enterococcus faecalis TX1341]
gi|315172086|gb|EFU16103.1| ParB-like partition protein [Enterococcus faecalis TX1342]
gi|315576181|gb|EFU88372.1| ParB-like partition protein [Enterococcus faecalis TX0309B]
gi|315579760|gb|EFU91951.1| ParB-like partition protein [Enterococcus faecalis TX0630]
gi|315582992|gb|EFU95183.1| ParB-like partition protein [Enterococcus faecalis TX0309A]
gi|323479205|gb|ADX78644.1| stage 0 sporulation protein J [Enterococcus faecalis 62]
gi|327536396|gb|AEA95230.1| plasmid partition ParB protein [Enterococcus faecalis OG1RF]
gi|329577029|gb|EGG58504.1| stage 0 sporulation protein J [Enterococcus faecalis TX1467]
Length = 296
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 106/297 (35%), Positives = 175/297 (58%), Gaps = 12/297 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRG+ AL ++ + D + E I ++ + PNP+ PR F+
Sbjct: 1 MNKG---KGLGRGIDALFQDIAKLED-----VDVKNEQVTEILLNELRPNPYQPRKTFDE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI G+ QP+IVR Y+IIAGERRFRA+K+A ++P IIR D +S
Sbjct: 53 TSLQELANSILHSGVFQPIIVRKSAVKGYEIIAGERRFRASKLAGKEKIPAIIREFDEES 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+++A++EN+QR+DLNPLEEA YE L+ TQ ++ +GKSR ++AN LR+L LP
Sbjct: 113 MMQVAVLENLQREDLNPLEEAEAYEMLMKNLKLTQAEVAERLGKSRPYIANYLRLLTLPD 172
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+V+ M++K+ +S+G ART L + L LA + ++VR E+LV E + + K+
Sbjct: 173 AVKAMVQKQSMSMGQARTLLGLKNKEQLLPLANRCIKDNLTVRQLEQLVAELNETQGKKG 232
Query: 238 KIFEGSREKEK-YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + + +++ Y+ + E ++ K G ++I+ + KG+ I+Y ++ L I +L
Sbjct: 233 KKAKKAIKEKPIYIRESEDRLMDKFGTTVAIQEKEGKGKIEIEYLSSSDLARILDIL 289
>gi|317123167|ref|YP_004103170.1| parB-like partition protein [Thermaerobacter marianensis DSM 12885]
gi|315593147|gb|ADU52443.1| parB-like partition protein [Thermaerobacter marianensis DSM 12885]
Length = 296
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 169/301 (56%), Gaps = 20/301 (6%)
Query: 1 MSNNYSKRRLGRG-----LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR 55
MS SKR L RG L AL+ V + E + I + I PNP+ PR
Sbjct: 1 MSK--SKRGLARGIDVKGLDALLPGVRPDPATA-------GEQVEQIPVDRIQPNPYQPR 51
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
F+ E L +L +S++ HGI+QPL+VR + Y+++AGERR+RAA+ A L VP ++R
Sbjct: 52 RQFDPEALAELVESVRQHGIVQPLLVRP-EGEGYRLVAGERRWRAAQAAGLETVPAVVRE 110
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+ +EIA+VEN+QR+DLNP+EEA GY L E G TQ I VGKSRSHVAN++R+
Sbjct: 111 FSDVEMMEIALVENLQREDLNPIEEAQGYRMLSEELGLTQEQISQRVGKSRSHVANLMRL 170
Query: 176 LKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
L LP +R ++ ++S GHA+ + S ++ LA +++SK ++VR EE V
Sbjct: 171 LSLPEDLRRLVADGKLSTGHAKVLLGVGSVAEMRRLAALVLSKGLTVRQLEEQV--AKAA 228
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
K ++ + DL ++ + ++++ R +GQ I+Y + + L+ I +
Sbjct: 229 ATKPRRPRADVLPPSPEVEDLVNRLQRALNTRVTLRGRGPRGQIVIEYYSWDDLERILAR 288
Query: 293 L 293
L
Sbjct: 289 L 289
>gi|315174219|gb|EFU18236.1| ParB-like partition protein [Enterococcus faecalis TX1346]
Length = 296
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 107/297 (36%), Positives = 175/297 (58%), Gaps = 12/297 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRG+ AL ++ + D + E I ++ + PNP+ PR F+
Sbjct: 1 MNKG---KGLGRGIDALFQDIAKLED-----VDVKNEQVTEILLNELRPNPYQPRKTFDE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI G+ QP+IVR Y+IIAGERRFRA+K+A ++P IIR D +S
Sbjct: 53 TSLQELANSILHSGVFQPIIVRKSAVKGYEIIAGERRFRASKLAGKEKIPAIIREFDEES 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+++A++EN+QR+DLNPLEEA YE L+ TQ ++ +GKSR ++AN LR+L LP
Sbjct: 113 MMQVAVLENLQREDLNPLEEAEAYEMLMKNLKLTQAEVAERLGKSRPYIANYLRLLTLPD 172
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+V+ M++K+ IS+G ART L + L LA + ++VR E+LV E + + K+
Sbjct: 173 AVKAMVQKQSISMGQARTLLGLKNKEQLLPLANRCIKDNLTVRQLEQLVAELNETQGKKG 232
Query: 238 KIFEGSREKEK-YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + + +++ Y+ + E ++ K G ++I+ + KG+ I+Y ++ L I +L
Sbjct: 233 KKAKKAIKEKPIYIRESEDRLMDKFGTTVAIQEKEGKGKIEIEYLSSSDLARILDIL 289
>gi|54310650|ref|YP_131670.1| putative ParB family protein [Photobacterium profundum SS9]
gi|46915093|emb|CAG21868.1| Putative ParB family protein [Photobacterium profundum SS9]
Length = 297
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 181/300 (60%), Gaps = 12/300 (4%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTE----TIPESQDCISIHSIVPNPHNPRNYF 58
N SKR LG+GL AL+ + + + + + + + IH + P + PR
Sbjct: 1 MNMSKRGLGKGLDALLATSSVAQAKQQSAEKAQSLSADGTLRELPIHLLQPGKYQPRKDM 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L +L SI++ GIIQP++VR + + Y+IIAGERR+RAA+ A L +P II++V++
Sbjct: 61 SDEALAELSDSIRAQGIIQPIVVRRLASQQYEIIAGERRWRAARQAGLQNIPCIIKDVND 120
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++ + IA++EN+QR+DLN +EEA +E+L SE+ T I VGKSR+ V+N+LR+ +L
Sbjct: 121 RAVIAIALIENIQREDLNSIEEAQAFERLQSEFSLTHQQIAEAVGKSRAAVSNLLRLNQL 180
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ V+ M+ + ++ +GHAR L+S + A+ +V+K ++VRDTE+LV++ N +R
Sbjct: 181 EAPVKRMLERRQLDMGHARALLSLDADMQLEAAETVVTKMLNVRDTEKLVKKLLNPVSER 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGE 295
+ E + LE +S ++G ++I H +N KG+ I ++ + K + ++ G+
Sbjct: 241 VRPVE-----NLEIKALENSLSERLGTQVAINHQKNGKGKIVISFDEAHKFKQLIAIFGQ 295
>gi|71909715|ref|YP_287302.1| chromosome segregation DNA-binding protein [Dechloromonas aromatica
RCB]
gi|71849336|gb|AAZ48832.1| chromosome segregation DNA-binding protein [Dechloromonas aromatica
RCB]
Length = 284
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 98/294 (33%), Positives = 173/294 (58%), Gaps = 22/294 (7%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRGL AL+ ++ + Q + + + P + PR + + E L +L
Sbjct: 5 KGLGRGLDALLSGSDKP----------QGDEQRNLPVERLRPGKYQPRTHMDQESLAELA 54
Query: 68 QSIKSHGIIQPLIV----RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
SI++ G++QP++V Y+I+AGERR+RA+++A LSEVPV++R++ ++ +L
Sbjct: 55 ASIRTQGVMQPILVRAVDHTPGAERYEIVAGERRWRASQLAGLSEVPVLVRSIPDEQALA 114
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+A++EN+QR++LNPLEEA G ++LI E+G T VG+SR N+LR+L+L + V+
Sbjct: 115 MALIENIQRENLNPLEEAQGLQRLIDEFGLTHQQAADAVGRSRPAATNLLRLLQLSTPVQ 174
Query: 184 EMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
EM+ ++ +GHAR L+ + +++AQ IV K +SVR+ E LVQ+ N
Sbjct: 175 EMLMTGKLDMGHARALLPLTGAQQVAVAQRIVQKGLSVREAERLVQQITN-----PPKKS 229
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
G ++ L L++ ++ +G N+ I+ ++ G+ I++ + +QL + S L
Sbjct: 230 GETPIDRDLLRLQENLADGLGANVQIRTNKKGAGKVTIEFGSLDQLDGLISRLS 283
>gi|332687255|ref|YP_004457029.1| chromosome (plasmid) partitioning protein ParB/ stage 0 sporulation
protein J [Melissococcus plutonius ATCC 35311]
gi|332371264|dbj|BAK22220.1| chromosome (plasmid) partitioning protein ParB/ stage 0 sporulation
protein J [Melissococcus plutonius ATCC 35311]
Length = 297
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 101/298 (33%), Positives = 172/298 (57%), Gaps = 13/298 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS N + LGRG+ AL + ++ + E + ++ + PNP+ PR F+
Sbjct: 1 MSKN---KGLGRGIDALFQDFANL-----EEVDMQKEEVIEVPLNELRPNPYQPRKTFDE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI+ G+ QP+I+R Y+IIAGERRFRA+K+A+ ++P I+R+ D ++
Sbjct: 53 TSLQELANSIQQSGVFQPIIIRKSTVKGYEIIAGERRFRASKLANKEKIPAIVRDFDEEA 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+++A++EN+QR+DLNP+EEA Y+ L+ TQ ++ + +GKSR ++AN LR+L LP
Sbjct: 113 MMQVAVLENLQREDLNPMEEAEAYDMLMKNLKLTQIEVSTRLGKSRPYIANYLRLLTLPE 172
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLS---LAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M+++E +S+G ARTL+ D LA V + ++VR E++V + + K+
Sbjct: 173 QVKNMVQRETLSMGQARTLLGLKDKKQLLSLANRSVKENLTVRQLEQIVTSLNENQGKQS 232
Query: 238 KIFEGS--REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+EK Y+ + E + K G + I+ + KG+ I+Y + L I +L
Sbjct: 233 TKKNNKLIKEKPYYIRESEDHLMDKFGTTVEIQEKEGKGKIEIEYLSASDLARILDIL 290
>gi|325919695|ref|ZP_08181697.1| chromosome segregation DNA-binding protein [Xanthomonas gardneri
ATCC 19865]
gi|325549803|gb|EGD20655.1| chromosome segregation DNA-binding protein [Xanthomonas gardneri
ATCC 19865]
Length = 309
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 167/304 (54%), Gaps = 11/304 (3%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNP 54
MS KR LGRGL AL+G + + + +S + + + P + P
Sbjct: 1 MSKPIPAKKRGLGRGLEALLGPKGAAAAAAPSAASEDALQPGDSLRQLPVTQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L +SIK+ G+IQP++ R + G ++I+AGERR+RA+++A L+EVPV++R
Sbjct: 61 RKEMDEVKLAELAESIKAQGVIQPIVARELAPGQFEIVAGERRWRASQLAGLTEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR
Sbjct: 121 ELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAGAVGRSRASVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD-- 230
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q+
Sbjct: 181 LLELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEYRAQQFAAG 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+K + + + LE ++S +G + H KG+ I Y + L +
Sbjct: 241 KVPGSLRKGKPAAAAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|331007810|ref|ZP_08330915.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [gamma proteobacterium IMCC1989]
gi|330418377|gb|EGG92938.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [gamma proteobacterium IMCC1989]
Length = 305
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 174/307 (56%), Gaps = 18/307 (5%)
Query: 1 MSNNYSKRRLGRGLAALIG----------EVNQSIDSPEKKTETIPESQDCISIHSIVPN 50
M+ ++ LGRGL AL+G V +I+ + + I + + I
Sbjct: 1 MA--TRRKGLGRGLDALMGAGTRQQEPAVSVQDAIEQVQSPSADINGQLKYVPVELIQRG 58
Query: 51 PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
+ PR E LE+L SI+S G++QP+++R I Y+IIAGERR+RA+++A L ++P
Sbjct: 59 KYQPRRDINQEALEELASSIRSQGVMQPIVIRPIAENKYEIIAGERRWRASQLAGLDKIP 118
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
+IR+V +++++ +A++EN+QR+DLNPLEEA+ ++L E+ T + VGKSR+ V
Sbjct: 119 AVIRDVPDEAAIAMALIENIQREDLNPLEEAVALKRLQDEFELTHQQVAEAVGKSRTAVT 178
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
N+LR++ L V++++ +I +GHAR + ++ +A +V+K +SVR E LV+
Sbjct: 179 NLLRLIALDEEVKKLLEHGDIEMGHARAMLSLTNDRQRIVASEVVAKSLSVRQAEALVR- 237
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLK 287
E+ K E L LE+ IS KVG+ + ++H KG+ +KY ++L
Sbjct: 238 --RTIEEINKPAEQKTFHNPDLEKLEQGISEKVGVPVMLQHSAKGKGKLVLKYNNLDELD 295
Query: 288 IICSLLG 294
I LG
Sbjct: 296 GILHHLG 302
>gi|188589225|ref|YP_001922712.1| stage 0 sporulation protein J [Clostridium botulinum E3 str. Alaska
E43]
gi|251779505|ref|ZP_04822425.1| stage 0 sporulation protein J [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|188499506|gb|ACD52642.1| stage 0 sporulation protein J [Clostridium botulinum E3 str. Alaska
E43]
gi|243083820|gb|EES49710.1| stage 0 sporulation protein J [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 292
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 164/290 (56%), Gaps = 1/290 (0%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LG+GL ALI + E ++ + IS++ I + PR F+SE +
Sbjct: 2 VKKFGLGKGLGALIPDEIDENVKHENIIDSSKSNNMLISLNKIRSDKEQPRKAFDSEKIV 61
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK HGIIQPLIVR ++ + I+AGERR+RAAK+A L E+P I ++ +K LEI
Sbjct: 62 ELAQSIKQHGIIQPLIVRQVNKSEFVIVAGERRWRAAKIAGLKELPCITMDISDKDILEI 121
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+++EN+QR+DLNP+EEAL Y++L+ ++ TQ+++ + +GKSR +AN +R++ L V++
Sbjct: 122 SLIENIQREDLNPIEEALAYKKLLEDFRITQSELSNRIGKSRVTIANTMRLMNLDERVQQ 181
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ + I+ GH R L++ + + + EL + N K E R
Sbjct: 182 YLIEGIITEGHGRALLAIENNDLQYEFAQKVIDNKLSVRELERLIKN-ISIEKANKELLR 240
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E Y D+ ++ G ++I + NKG+ I+Y + E L+ I ++
Sbjct: 241 ELNPYYKDVRNQLQDYFGTKVNILDKKNKGKIEIEYYSEEDLQRILDIIN 290
>gi|110596957|ref|ZP_01385247.1| parB-like partition proteins [Chlorobium ferrooxidans DSM 13031]
gi|110341644|gb|EAT60104.1| parB-like partition proteins [Chlorobium ferrooxidans DSM 13031]
Length = 295
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 109/296 (36%), Positives = 163/296 (55%), Gaps = 9/296 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTE-TIPESQDCISIHSIVPNPHNPRNYFESEGL 63
SK LGRGL ALI + S E+ E S + I I NP PR F+ L
Sbjct: 1 MSKNALGRGLKALIPDEGFDSGSREEPEELARDGSIGSLPIEKIRANPFQPRKEFDETAL 60
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSL 122
E+L SI +G+IQP+ V D Y++I+GERR RA +A +P + D+ S L
Sbjct: 61 EELKNSIIENGVIQPVTVCR-DGEGYQLISGERRLRAVTLAGFKFIPAYVIEAHDDSSKL 119
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR+DLN +E AL + L ++ TQ++I VGK+RS V+N LR+LKLP +
Sbjct: 120 ELALIENIQREDLNAIEVALALKSLTTKCRLTQDEIAQKVGKNRSTVSNFLRLLKLPLQI 179
Query: 183 REMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++ IR EIS GHAR L L + + ++S ++SVR TE LV KE+ K
Sbjct: 180 QDSIRNREISSGHARALINLPGEQQQLKVWKQVLSHELSVRQTETLVNRM--FKEQSKPA 237
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLG 294
S ++ ++T LE + K+ + I + + KG+ I+Y +N+ L + +L
Sbjct: 238 QATSPDRSLHITQLESHLRDKLATKVRIVEKKGGKGEIHIQYFSNDDLDRVLEILN 293
>gi|312794886|ref|YP_004027808.1| Chromosome partitioning protein parB [Burkholderia rhizoxinica HKI
454]
gi|312166661|emb|CBW73664.1| Chromosome partitioning protein parB [Burkholderia rhizoxinica HKI
454]
Length = 297
Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 103/296 (34%), Positives = 179/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ +++ S + + + P + PR +
Sbjct: 3 MNAAVKKKGLGRGLDALLGGSADITEAVKQQ-----GSPSVLPLDRLQPGKYQPRTRMDE 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR + Y+IIAGERRFRAA++A L EVPV+++ V +++
Sbjct: 58 GALQELAASIRAQGLMQPILVRPVAAQRYEIIAGERRFRAARLAGLDEVPVLVKQVADEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T +G+SRS V+N+LR+L L
Sbjct: 118 AAAMALIENIQREDLNPLEEAQGIQRLLDEFKFTHEQAAESLGRSRSAVSNLLRLLNLAQ 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V++++SVR+TE+LV + K
Sbjct: 178 PVQTMLLAGDLDMGHARALLAVDGATQITLANQVVNRRLSVRETEKLVAATAKQIPPSAK 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
S+E+ + + LE+++S V + IK R +GQ I + + + L I + L
Sbjct: 238 --RASQERSRDIMRLEEEVSDLVAATVRIKMGRRGRGQLTIDFGSLDALDGILARL 291
>gi|254472229|ref|ZP_05085629.1| chromosome partitioning protein, ParB [Pseudovibrio sp. JE062]
gi|211958512|gb|EEA93712.1| chromosome partitioning protein, ParB [Pseudovibrio sp. JE062]
Length = 299
Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 132/305 (43%), Positives = 193/305 (63%), Gaps = 14/305 (4%)
Query: 1 MSNNY----SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRN 56
M+ + +RLGRGLA L+G+VN P T + I + PNP NPR
Sbjct: 1 MAKTEEAGRTNKRLGRGLATLLGDVNSE---PVVSTPERNRDVRKVPIEYLQPNPRNPRK 57
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIR 114
F + L +L +S++ GI+QP++VR N ++IIAGERR+RAA+ A L E PV+IR
Sbjct: 58 SFVEDDLNNLTESVREKGIVQPILVRPRPNKPGHFEIIAGERRWRAAQKAGLHEAPVVIR 117
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
V ++ +LE+AI+ENVQR DLNP+EEALGY+QLI E+ Y+Q ++ ++GKSRSHVAN LR
Sbjct: 118 EVTDQEALELAIIENVQRADLNPIEEALGYDQLIEEFSYSQVELSKVIGKSRSHVANTLR 177
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+LKLP+SV++ + + ++ GHAR L++ DP +LA++IV K ++VRD E L N
Sbjct: 178 LLKLPNSVKDYLAEGLLTAGHARALITAEDPAALAELIVEKGLTVRDAERLA---QNPDL 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR--NNKGQFCIKYETNEQLKIICSL 292
+KK EK+ LEK+++ +GL ++I H+ G+ IKY+ EQL +C L
Sbjct: 235 FQKKEAAPKPEKDADTRALEKRLTDGLGLKVAIAHKTEKGTGELKIKYKNVEQLDEVCRL 294
Query: 293 LGEND 297
LG +
Sbjct: 295 LGIQN 299
>gi|227891374|ref|ZP_04009179.1| stage 0 DNA-binding protein [Lactobacillus salivarius ATCC 11741]
gi|227866763|gb|EEJ74184.1| stage 0 DNA-binding protein [Lactobacillus salivarius ATCC 11741]
Length = 291
Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 106/299 (35%), Positives = 165/299 (55%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + LGRG+ AL K+ + E + I I PNP+ PR F
Sbjct: 1 MASRS--KGLGRGIDALF--------QESKEEQQPDEQVVELEISEIRPNPYQPRKTFNE 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L +SIK G+ QP+IVR Y+IIAGERR+RA+K+A +E+P IIR + +
Sbjct: 51 EALEELAKSIKKSGVFQPIIVRKSSVKGYEIIAGERRYRASKLAKKTEIPAIIREFNEEQ 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DL PLEEA Y L+ + TQ + +GKSR ++AN LR+L LP
Sbjct: 111 MMEVAVLENLQREDLTPLEEAEAYNTLMEKLNLTQTQVSERLGKSRPYIANYLRLLGLPG 170
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M++ +S+G ART + + LA+ V + ++VR E+LV + + KK K+
Sbjct: 171 KVKLMLQDGSLSMGQARTLLAVKDKEKLMELAEKTVKEGLTVRQLEQLVAQINGKKPKKA 230
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK--HRNNKGQFCIKYETNEQLKIICSLLG 294
K E Y+ E + K G +++K ++ KG+ I Y + + I +L
Sbjct: 231 KKQTNP--YEPYIKQTENLLQEKFGTKVAVKANAKSGKGKIEIDYLSIDDFNRIMDILK 287
>gi|78049575|ref|YP_365750.1| chromosome partitioning protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325924902|ref|ZP_08186334.1| chromosome segregation DNA-binding protein [Xanthomonas perforans
91-118]
gi|78038005|emb|CAJ25750.1| chromosome partitioning protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325544689|gb|EGD16040.1| chromosome segregation DNA-binding protein [Xanthomonas perforans
91-118]
Length = 309
Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 96/304 (31%), Positives = 168/304 (55%), Gaps = 11/304 (3%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQSIDSP----EKKTETIPESQDCISIHSIVPNPHNP 54
MS KR LGRGL AL+G + + +++ ++ + + + P + P
Sbjct: 1 MSKPPLAKKRGLGRGLEALLGPKGAAAAAAPAGADEQALQPGDTLRTLVVTQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L +SIK+ G+IQP++ R + G ++I+AGERR+RA+++A L+EVPV++R
Sbjct: 61 RREMDEVKLAELAESIKAQGVIQPIVARELAPGQFEIVAGERRWRASQLAGLTEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR
Sbjct: 121 ELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAGAVGRSRASVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD-- 230
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q+
Sbjct: 181 LLELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAG 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+K + + LE ++S +G + H KG+ I Y + L +
Sbjct: 241 KVPGSLRKGKPAPVAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|196249883|ref|ZP_03148579.1| parB-like partition protein [Geobacillus sp. G11MC16]
gi|196210759|gb|EDY05522.1| parB-like partition protein [Geobacillus sp. G11MC16]
Length = 286
Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 107/289 (37%), Positives = 172/289 (59%), Gaps = 14/289 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL ++ + + E+ +SI + PNP+ PR F+ E +E+L
Sbjct: 3 KGLGKGINALFNNLSLNGE---------EETIFEVSISDLHPNPYQPRKTFQPEAIEELK 53
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI HGI+QPLIVR ++I+ GERR+RAAK A+L VPV++R + ++ +E A++
Sbjct: 54 QSILQHGILQPLIVRR-SLKGFEIVVGERRYRAAKEANLPSVPVVVRELTDEQMMEFALL 112
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L+ + TQ +I S VGKSR H+AN LR+L LP V++++
Sbjct: 113 ENLQREDLNPIEEAMAYKMLMDKLHLTQEEIASRVGKSRPHIANHLRLLSLPPEVQKLLI 172
Query: 188 KEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+S+GH R L+ + + V + ++VR E+LVQ+ N+ R+
Sbjct: 173 DGTLSMGHGRALLGLKKKGKMKSIVERTVREGLNVRQLEKLVQQM-NENVSRETSKRKPP 231
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
EK ++ + E + K G N++IK KG+ I++ + E L+ I LL
Sbjct: 232 EKSVFIRESESLLREKFGTNVTIKQSKKKGKIEIEFFSPEDLERILELL 280
>gi|158426336|ref|YP_001527628.1| ParB-like partition protein [Azorhizobium caulinodans ORS 571]
gi|158333225|dbj|BAF90710.1| ParB-like partition protein [Azorhizobium caulinodans ORS 571]
Length = 292
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 118/295 (40%), Positives = 180/295 (61%), Gaps = 6/295 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP-ESQDCISIHSIVPNPHNPRNYFE 59
M+ + RLGRGLAALIG++ ++ + I + P+ NPR F
Sbjct: 1 MAE-EGRSRLGRGLAALIGDMGEADAPSRANAPAPKAGGTRKLPIEQVQPSARNPRRTFV 59
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
EGL++L SI+ GIIQP++VR + ++I+AGERR+RAA+ ASL EVPV++ ++++
Sbjct: 60 EEGLDELAASIREKGIIQPIVVRPMGTDRFEIVAGERRWRAAQRASLHEVPVVVVELNDR 119
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+LEIAI+ENVQR DLN LEEA GYE L++++ YTQ D+ ++GKSR H+AN +R+LKLP
Sbjct: 120 EALEIAIIENVQRSDLNALEEAQGYEALMAQFEYTQGDLAKVIGKSRPHIANTIRLLKLP 179
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
SV+ + +S GHAR L++ DP L + +V K++SVRD E L + + +
Sbjct: 180 ESVKAYLADGRLSAGHARALLAHDDPERLVRAVVEKRLSVRDVEALTKTKKA----LTEK 235
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+K+ LEK++ +GL + ++ + G+ I+Y EQL +C LG
Sbjct: 236 AGAPLQKDADTKALEKRLGDVLGLAVQLQSKGEAGELRIRYTDLEQLDQLCRRLG 290
>gi|332520988|ref|ZP_08397448.1| parB-like partition protein [Lacinutrix algicola 5H-3-7-4]
gi|332043518|gb|EGI79714.1| parB-like partition protein [Lacinutrix algicola 5H-3-7-4]
Length = 302
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 106/297 (35%), Positives = 164/297 (55%), Gaps = 5/297 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE-KKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + + I S E K + + + + + +I NP PR F
Sbjct: 1 MAKATKKQALGRGLSALLKDPSNDIQSAEDKNADKVVGNIIELELSAIEMNPFQPRTNFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SIK G+IQP+ VR + Y++++GERRFRA+ + L +P IR +++
Sbjct: 61 EESLRELASSIKELGVIQPITVRKLGYDKYQLVSGERRFRASTLIGLETIPAYIRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E AL Y++LI E TQ + VGK RS +AN LR+LKL
Sbjct: 121 ESLEMALVENIQRQDLDPIEIALSYQRLIDEINLTQEQMSERVGKKRSTIANYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ +R +S+GH R +++ D + I+S K+SVR+TE LV+ + E
Sbjct: 181 PIIQTGMRDGFLSMGHGRAIINIEDQTIQLDIYEKILSNKLSVRETEALVKNFNATSEVE 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+ K++ K S G I +K N KG+ I + + E I L
Sbjct: 241 IPKKPVEADIPKFVKKGIKDFSEYFGHKIDVKISNNGKGKITIPFHSEEDFNRIKKL 297
>gi|294143114|ref|YP_003559092.1| ParB family protein [Shewanella violacea DSS12]
gi|293329583|dbj|BAJ04314.1| ParB family protein [Shewanella violacea DSS12]
Length = 295
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 97/297 (32%), Positives = 172/297 (57%), Gaps = 13/297 (4%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSI-----VPNPHNPRNYFES 60
KR LG+GL AL+ + + + + + P + PR
Sbjct: 4 KKRGLGKGLDALLSTSHAATKKLNAVENAAEVTVKTDDLLMLDIDLMQPGKYQPRKDMSP 63
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L +SI + GIIQP++VR + +++IIAGERR+RAA++A L +VP I++ V +++
Sbjct: 64 EALEELAESIVAQGIIQPIVVRKVSASMFEIIAGERRWRAAQIAKLDKVPCIVKQVADEA 123
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ I+++EN+QR+DLN +EEA+ ++L+ E+ T I + VGKSR+ V+N+LR+ L
Sbjct: 124 AVAISLIENIQREDLNAMEEAIALDRLMREFELTHQQIATAVGKSRATVSNLLRLNGLNE 183
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ +I +GHAR L + + ++A+++ +K+++VR+TE LV + N + K
Sbjct: 184 PVKRMLEYGDIDMGHARALLAIEGDEQTNIARLVAAKELTVRETERLVTKTLNPPQIADK 243
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
K+ +T LE + ++G +SI H + KG+ I Y+ ++L I + +
Sbjct: 244 -----PAKDHDVTRLESLLIERLGAKVSITHNKKGKGKLVINYQDLDELDGIINRIN 295
>gi|323340449|ref|ZP_08080705.1| chromosome partitioning protein ParB [Lactobacillus ruminis ATCC
25644]
gi|323092138|gb|EFZ34754.1| chromosome partitioning protein ParB [Lactobacillus ruminis ATCC
25644]
Length = 293
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 107/293 (36%), Positives = 171/293 (58%), Gaps = 14/293 (4%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
+ LGRGL AL E + +T T E+ +++ I NP+ PR F+ L +
Sbjct: 5 KNKGLGRGLDALFTEFD--------ETATADETVVELNLDDIRSNPYQPRKTFDETSLSE 56
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SI+ G+ QP+IVR Y+IIAGERR+RA+KMA + +P I+R+++ + +EIA
Sbjct: 57 LSDSIRKQGVFQPIIVRQSKVSGYEIIAGERRYRASKMAKRTTIPAIVRDLNEEEMMEIA 116
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL PLEEA Y L+ TQ + +GKSR ++AN LR+L LP +V++
Sbjct: 117 VLENLQREDLTPLEEAQAYNTLMENLNLTQAQVSEKLGKSRPYIANYLRLLSLPKAVKDF 176
Query: 186 IRKEEISLGHARTLVSTSDPLS---LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++K +S+G ARTL+S D LA+ V + ++VR E +V E + +K K++K+ +
Sbjct: 177 LQKGSLSMGQARTLLSVKDKKKLVALAEKTVEEGLTVRQLESIVNELNGEKGKQRKVKKP 236
Query: 243 SREKEKYLTDLEKKISSKVGLNISIK--HRNNKGQFCIKYETNEQLKIICSLL 293
++ YL E+ + K ++IK + KG+ I Y +N+ L I +L
Sbjct: 237 AK-LSPYLKHSEELLREKFSTKVAIKSSQKTGKGKIEIDYLSNDDLNRILEIL 288
>gi|163796494|ref|ZP_02190454.1| ParB-like partition protein [alpha proteobacterium BAL199]
gi|159178344|gb|EDP62888.1| ParB-like partition protein [alpha proteobacterium BAL199]
Length = 362
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 120/305 (39%), Positives = 188/305 (61%), Gaps = 16/305 (5%)
Query: 1 MSNNYSKRR---LGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
M+++ ++RR LGRGL+AL+G+ + ++ +T + + + P P PR
Sbjct: 1 MTDDPTRRRTNKLGRGLSALLGDEEEDQAQLDRLRQT-----RTLPVERLGPGPFQPRRR 55
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRA-IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
F+ E L +L +SI+ G++QP++VR D Y+IIAGERR+RAA++A L EVPV++R
Sbjct: 56 FDQEDLAELAESIREQGVLQPILVRRSPDGENYEIIAGERRWRAAQLAQLHEVPVLVREF 115
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D+++++EIA+VENVQR+DL LEEA GY +LI EYG++Q D+ VGKSRSHVAN LR+L
Sbjct: 116 DDRTAMEIALVENVQRRDLTALEEADGYHRLIDEYGHSQEDVARAVGKSRSHVANTLRLL 175
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
LP VR ++ +++ GHAR L+ D ++LA+ +V++K++VRDTE LVQ + + R
Sbjct: 176 NLPDEVRTLLEDGQLTAGHARALLGQDDAVALAREVVTRKLNVRDTERLVQRGRSDQPPR 235
Query: 237 KKIFEGSRE-----KEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKII 289
+ K+ +E+ + ++GL +SI H G + Y EQL ++
Sbjct: 236 PPKPPRAASSSQVIKDADTLAVERDLREQLGLAVSIDHDPGTGGGSVVVNYTDLEQLDLV 295
Query: 290 CSLLG 294
L
Sbjct: 296 IERLS 300
>gi|167571769|ref|ZP_02364643.1| stage 0 sporulation protein J, putative [Burkholderia oklahomensis
C6786]
Length = 295
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 179/299 (59%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVAKKKGLGRGLEALLGGSADITEAV-----KIDGAPNVLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLDEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFSFTHEQAAESVGRSRSAVSNLLRLLNLAM 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTHTTKAEPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + N+ IK R +GQ I + + L+ I + L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGN 292
>gi|329894820|ref|ZP_08270620.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [gamma proteobacterium IMCC3088]
gi|328922714|gb|EGG30048.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [gamma proteobacterium IMCC3088]
Length = 295
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 173/301 (57%), Gaps = 13/301 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP----ESQDCISIHSIVPNPHNPRN 56
MS KR LGRGL AL+ E N + E + + + I + PR
Sbjct: 1 MS--AKKRGLGRGLNALLREANNEVSPSESHEAGQALGDYATLKKLPVELIQRGKYQPRR 58
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
E E LE+L +SIK+ G++QP++VR I Y+IIAGERR+RA ++A L +P ++R +
Sbjct: 59 DIEPEALEELAESIKAQGVMQPIVVREIAPQKYEIIAGERRWRATQLAGLDTIPALVREL 118
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++++L +A++EN+QR+DLN +EEA+ +L +E+ TQ ++ + VGKSRS VAN LR++
Sbjct: 119 SDETALAMALIENIQREDLNAMEEAIALHRLQTEFELTQQEVATAVGKSRSTVANFLRLM 178
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
LP + ++ + +I +GHA+TL + + A+ +V+K ++VR+TE V
Sbjct: 179 SLPKETQTLLERGDIEMGHAKTLLGLPQDQQAAAARWVVAKGLTVRETEGYVARLLEGGT 238
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ + LE +++SK+G + I+H KG+ + Y + ++L I + +
Sbjct: 239 QNNE----KPSQDPNIRALELELASKLGAKVQIQHGRKGKGKLVLAYNSLDELDGILAHI 294
Query: 294 G 294
Sbjct: 295 K 295
>gi|219670946|ref|YP_002461381.1| parB-like partition protein [Desulfitobacterium hafniense DCB-2]
gi|219541206|gb|ACL22945.1| parB-like partition protein [Desulfitobacterium hafniense DCB-2]
Length = 283
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 93/288 (32%), Positives = 150/288 (52%), Gaps = 11/288 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SK+ LGRGL ALIG ++ S I + I NP PR F E LE
Sbjct: 1 MSKKALGRGLEALIGAEPVGNEA----------SVQEIELDKIRVNPDQPRRSFNQESLE 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L S+K+HG++QP++V+ D + AGERR+RAA +A L+++P +I+ + E
Sbjct: 51 ELAASLKTHGLLQPILVQLKDEEYIIV-AGERRYRAAILAGLAKIPCLIKTGSEQELAEK 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR DL+P+EE L Y +LI EY TQ + VGK R VAN+LRI++LP V
Sbjct: 110 ALIENIQRSDLSPVEEGLAYARLIKEYDLTQEQVAERVGKGRPTVANLLRIIQLPDPVLH 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+I++ ++SLGHA+ L+ D + EL E+++ +
Sbjct: 170 LIQEGKLSLGHAKVLLGIKDSSLQVLLAQKVAKESLPVRELESLILKYTEQQETPKKAKT 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
+ T +E ++ S + +K +G+ I+Y + ++ + +
Sbjct: 230 KNSFLFTQIEDQLRSSFQTKVKVKGDAGRGKIEIEYFSEDEFNRLLEI 277
>gi|83721551|ref|YP_443809.1| stage 0 sporulation protein J [Burkholderia thailandensis E264]
gi|167620983|ref|ZP_02389614.1| stage 0 sporulation protein J, putative [Burkholderia thailandensis
Bt4]
gi|83655376|gb|ABC39439.1| stage 0 sporulation protein J, putative [Burkholderia thailandensis
E264]
Length = 295
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 180/299 (60%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVAKKKGLGRGLEALLGGSADITEAV-----KIEGAPNVLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + ++IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKFEIIAGERRFRAARLAGLEEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAM 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTHTTKSEPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + N+ IK R +GQ I + + L+ I + L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGN 292
>gi|114322024|ref|YP_743707.1| parB-like partition proteins [Alkalilimnicola ehrlichii MLHE-1]
gi|114228418|gb|ABI58217.1| parB-like partition protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 287
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 87/291 (29%), Positives = 161/291 (55%), Gaps = 11/291 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
KR LGRGL AL+G + + + + + + PR F+ L++
Sbjct: 4 KKRGLGRGLDALLGLPEDDAGEAGRAS----AELRDLPLDCLERGRYQPRTAFDPAALQE 59
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SI++ G++QPL+VR + ++I+AGERR+RAA++A L VP I+R++ +++++ +A
Sbjct: 60 LADSIQAQGVVQPLVVRPLAEQRWEIVAGERRWRAAQLAGLETVPAIVRDIPDEAAVAVA 119
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNPLE A ++L+ E+G T + VG+SR+ V N+LR+L+L V+ +
Sbjct: 120 LIENLQREDLNPLEAATALQRLVHEFGLTHQAVAEAVGRSRAAVTNLLRLLELNEPVKAL 179
Query: 186 IRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
I + + +GHAR L A + + +SVR TE LV+ + ++
Sbjct: 180 IGEGRLEMGHARALAALKGDIQTRAAGQVAERGLSVRQTEALVRRLQEEADQ----TREP 235
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
++ + L+ ++ ++G + I+ +G+ I+Y + ++L I +
Sbjct: 236 PREDPDVRRLQDDLTRRLGAPVRIQQGVRGRGKVVIQYSSLDELDGILDRI 286
>gi|254194771|ref|ZP_04901202.1| ParB family protein [Burkholderia pseudomallei S13]
gi|254201528|ref|ZP_04907892.1| putative stage 0 sporulation protein J [Burkholderia mallei FMH]
gi|254206866|ref|ZP_04913217.1| putative stage 0 sporulation protein J [Burkholderia mallei JHU]
gi|147747422|gb|EDK54498.1| putative stage 0 sporulation protein J [Burkholderia mallei FMH]
gi|147752408|gb|EDK59474.1| putative stage 0 sporulation protein J [Burkholderia mallei JHU]
gi|169651521|gb|EDS84214.1| ParB family protein [Burkholderia pseudomallei S13]
Length = 308
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 106/299 (35%), Positives = 180/299 (60%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 14 MNAVAKKKGLGRGLEALLGGSADITEAV-----KIEGAPNVLALGKLQAGKYQPRTRMDE 68
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 69 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQA 128
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L
Sbjct: 129 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAM 188
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 189 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKAEPAVKA 248
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + N+ IK R +GQ I + + L+ I + L N
Sbjct: 249 RAKDDGGRD--TRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGN 305
>gi|53721012|ref|YP_109998.1| chromosome partitioning protein ParB [Burkholderia pseudomallei
K96243]
gi|53724006|ref|YP_104452.1| stage 0 sporulation protein J [Burkholderia mallei ATCC 23344]
gi|76811421|ref|YP_331603.1| chromosome partitioning protein ParB [Burkholderia pseudomallei
1710b]
gi|121599697|ref|YP_994643.1| putative stage 0 sporulation protein J [Burkholderia mallei SAVP1]
gi|124384893|ref|YP_001027576.1| putative stage 0 sporulation protein J [Burkholderia mallei NCTC
10229]
gi|126438424|ref|YP_001060972.1| ParB family protein [Burkholderia pseudomallei 668]
gi|126448276|ref|YP_001082526.1| putative stage 0 sporulation protein J [Burkholderia mallei NCTC
10247]
gi|126452714|ref|YP_001068272.1| ParB family protein [Burkholderia pseudomallei 1106a]
gi|134281586|ref|ZP_01768294.1| ParB family protein [Burkholderia pseudomallei 305]
gi|167001261|ref|ZP_02267060.1| chromosome-partitioning protein ParB [Burkholderia mallei PRL-20]
gi|167721833|ref|ZP_02405069.1| ParB family protein [Burkholderia pseudomallei DM98]
gi|167740805|ref|ZP_02413579.1| ParB family protein [Burkholderia pseudomallei 14]
gi|167818020|ref|ZP_02449700.1| ParB family protein [Burkholderia pseudomallei 91]
gi|167826383|ref|ZP_02457854.1| ParB family protein [Burkholderia pseudomallei 9]
gi|167847902|ref|ZP_02473410.1| ParB family protein [Burkholderia pseudomallei B7210]
gi|167896459|ref|ZP_02483861.1| ParB family protein [Burkholderia pseudomallei 7894]
gi|167904861|ref|ZP_02492066.1| ParB family protein [Burkholderia pseudomallei NCTC 13177]
gi|167913139|ref|ZP_02500230.1| ParB family protein [Burkholderia pseudomallei 112]
gi|167921076|ref|ZP_02508167.1| ParB family protein [Burkholderia pseudomallei BCC215]
gi|217423890|ref|ZP_03455390.1| ParB family protein [Burkholderia pseudomallei 576]
gi|226193062|ref|ZP_03788672.1| ParB family protein [Burkholderia pseudomallei Pakistan 9]
gi|237814355|ref|YP_002898806.1| chromosome segregation DNA-binding protein [Burkholderia
pseudomallei MSHR346]
gi|238561560|ref|ZP_00441831.2| chromosome-partitioning protein ParB [Burkholderia mallei GB8 horse
4]
gi|242315055|ref|ZP_04814071.1| ParB family protein [Burkholderia pseudomallei 1106b]
gi|254175189|ref|ZP_04881850.1| putative stage 0 sporulation protein J [Burkholderia mallei ATCC
10399]
gi|254184033|ref|ZP_04890624.1| ParB family protein [Burkholderia pseudomallei 1655]
gi|254186498|ref|ZP_04893015.1| ParB family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254260567|ref|ZP_04951621.1| ParB family protein [Burkholderia pseudomallei 1710a]
gi|254357418|ref|ZP_04973692.1| putative stage 0 sporulation protein J [Burkholderia mallei
2002721280]
gi|52211426|emb|CAH37417.1| chromosome partitioning protein ParB [Burkholderia pseudomallei
K96243]
gi|52427429|gb|AAU48022.1| stage 0 sporulation protein J, putative [Burkholderia mallei ATCC
23344]
gi|76580874|gb|ABA50349.1| chromosome partitioning protein ParB [Burkholderia pseudomallei
1710b]
gi|121228507|gb|ABM51025.1| putative stage 0 sporulation protein J [Burkholderia mallei SAVP1]
gi|124292913|gb|ABN02182.1| chromosome-partitioning protein ParB [Burkholderia mallei NCTC
10229]
gi|126217917|gb|ABN81423.1| ParB family protein [Burkholderia pseudomallei 668]
gi|126226356|gb|ABN89896.1| ParB family protein [Burkholderia pseudomallei 1106a]
gi|126241146|gb|ABO04239.1| chromosome-partitioning protein ParB [Burkholderia mallei NCTC
10247]
gi|134247253|gb|EBA47339.1| ParB family protein [Burkholderia pseudomallei 305]
gi|148026482|gb|EDK84567.1| putative stage 0 sporulation protein J [Burkholderia mallei
2002721280]
gi|157934183|gb|EDO89853.1| ParB family protein [Burkholderia pseudomallei Pasteur 52237]
gi|160696234|gb|EDP86204.1| putative stage 0 sporulation protein J [Burkholderia mallei ATCC
10399]
gi|184214565|gb|EDU11608.1| ParB family protein [Burkholderia pseudomallei 1655]
gi|217392953|gb|EEC32975.1| ParB family protein [Burkholderia pseudomallei 576]
gi|225934662|gb|EEH30639.1| ParB family protein [Burkholderia pseudomallei Pakistan 9]
gi|237505574|gb|ACQ97892.1| chromosome segregation DNA-binding protein [Burkholderia
pseudomallei MSHR346]
gi|238524331|gb|EEP87764.1| chromosome-partitioning protein ParB [Burkholderia mallei GB8 horse
4]
gi|242138294|gb|EES24696.1| ParB family protein [Burkholderia pseudomallei 1106b]
gi|243062884|gb|EES45070.1| chromosome-partitioning protein ParB [Burkholderia mallei PRL-20]
gi|254219256|gb|EET08640.1| ParB family protein [Burkholderia pseudomallei 1710a]
Length = 295
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 106/299 (35%), Positives = 180/299 (60%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVAKKKGLGRGLEALLGGSADITEAV-----KIEGAPNVLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAM 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKAEPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + N+ IK R +GQ I + + L+ I + L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGN 292
>gi|161170273|gb|ABX59243.1| predicted transcriptional regulator [uncultured marine bacterium
EB000_55B11]
gi|297183802|gb|ADI19925.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 296
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 122/297 (41%), Positives = 182/297 (61%), Gaps = 10/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS ++ LGRGL+AL+ +++ D+ S + + I ++ NP+ PR F
Sbjct: 1 MSMKKDRKGLGRGLSALMADIDH--DTKIISNTVSNTSSNMLPIEKVIANPNQPRQDFXK 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E LEDL +SI S GIIQP+IVR Y+I+AGERR+RAA+ A L EVPV++R+ +
Sbjct: 59 EDLEDLTRSIASRGIIQPIIVRVSKENNDLYQIVAGERRWRAAQXAQLHEVPVVVRDFTD 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ LE+AI+ENVQR +LNP+EEAL Y+ LI + YTQ + + +GKSRSHVAN+LR+L L
Sbjct: 119 EELLEVAIIENVQRSNLNPVEEALAYKALIDNFNYTQEQVATGLGKSRSHVANLLRLLNL 178
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V + +R +S GHARTLV L+LA +++ + MSVR+ E V+++ ++K KK
Sbjct: 179 PEKVLKYVRVGSLSSGHARTLVGXKQALALANIMIEENMSVREAEIYVKQRLDRKNLNKK 238
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR--NNKGQFCIKYETNEQLKIICSLL 293
I K+ LE + + + + +SI H+ G+ I Y + L +CS+L
Sbjct: 239 INR----KDADTRALEADLFTNIKMKVSIDHKEIKGSGKLIISYNDLDXLDKLCSIL 291
>gi|51894466|ref|YP_077157.1| ParB-like nuclease domain-containing protein [Symbiobacterium
thermophilum IAM 14863]
gi|51858155|dbj|BAD42313.1| ParBc, ParB-like nuclease domain [Symbiobacterium thermophilum IAM
14863]
Length = 298
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 97/290 (33%), Positives = 162/290 (55%), Gaps = 9/290 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SK+ LGRG+ ALI ++ + + + I I PNP PR F+ LE
Sbjct: 1 MSKKGLGRGIGALIPGIDPA--------DRERLGVVELEIGVIRPNPDQPRKEFDEVRLE 52
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SIK HGI+QP++VR +G Y+I+AGERR+RAA++A L++VP ++R + +EI
Sbjct: 53 ELALSIKEHGIVQPILVRKAGDG-YEIVAGERRWRAAQLAGLTKVPALVREFSDAERMEI 111
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEA Y L+ +G TQ + +G+SRS VAN LR+L+LP+ V++
Sbjct: 112 ALIENLQREDLNPMEEAEAYRTLMESFGLTQEALAQRLGRSRSQVANTLRLLQLPAQVQD 171
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+R +S+GHA+ L DP + + EL E ++ +++
Sbjct: 172 EVRAGRLSMGHAKVLCGVEDPARVVALAEMVIAKGLSVRELEDELTPRERRQRPRARAKG 231
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ L +E+++ ++G + + ++G+ I + + L + LG
Sbjct: 232 KLPPDLAAVEQQLREQLGTPVKLHWSGDRGRVEITFFDEDGLNRLLEALG 281
>gi|89897797|ref|YP_521284.1| hypothetical protein DSY5051 [Desulfitobacterium hafniense Y51]
gi|89337245|dbj|BAE86840.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 283
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 93/288 (32%), Positives = 149/288 (51%), Gaps = 11/288 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SK+ LGRGL ALIG ++ S I + I NP PR F E LE
Sbjct: 1 MSKKALGRGLEALIGAEPVGNEA----------SVQEIELDKIRVNPDQPRRSFNQESLE 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L S+K+HG++QP++V+ D + AGERR+RAA +A L+++P +I+ + E
Sbjct: 51 ELAASLKTHGLLQPILVQLKDEEYIIV-AGERRYRAAILAGLAKIPCLIKTGSEQELAEK 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR DL+P+EE L Y +LI EY TQ + VGK R VAN+LRI++LP V
Sbjct: 110 ALIENIQRSDLSPVEEGLAYARLIKEYDLTQEQVAERVGKGRPTVANLLRIIQLPDPVLH 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+I++ +SLGHA+ L+ D + EL E+++ +
Sbjct: 170 LIQEGRLSLGHAKVLLGIKDSSLQVLLAQKVAKESLPVRELESLILKYTEQQETPKKAKT 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
+ T +E ++ S + +K +G+ I+Y + ++ + +
Sbjct: 230 KNSFLFTQIEDQLRSSFQTKVKVKGDAGRGKIEIEYFSEDEFNRLLEI 277
>gi|167564627|ref|ZP_02357543.1| stage 0 sporulation protein J, putative [Burkholderia oklahomensis
EO147]
Length = 295
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 180/299 (60%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVAKKKGLGRGLEALLGGSADITEAV-----KIDGAPNVLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLDEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L +
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFSFTHEQAAESVGRSRSAVSNLLRLLNLAT 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTHTTKAEPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + N+ IK R +GQ I + + L+ I + L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGN 292
>gi|209883521|ref|YP_002287378.1| ParB family protein [Oligotropha carboxidovorans OM5]
gi|209871717|gb|ACI91513.1| ParB family protein [Oligotropha carboxidovorans OM5]
Length = 296
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 11/301 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + RLGRGLA+LIG+V E+ T + I + NP NPR F
Sbjct: 1 MAEE--RSRLGRGLASLIGDVGGEAAHVERPARTP----RKVPIEFLKANPRNPRRTFAD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L++L SIK HG+IQP++VRA+ ++IIAGERR+RA++ A L EVP++ V +
Sbjct: 55 TELDELSASIKQHGVIQPIVVRAVKGAADRFEIIAGERRWRASQRAGLHEVPIVTLEVTD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++LEIAI+ENVQR DLN +EEA GY L + Y ++ +DI +VGKSRSHVAN +R+ KL
Sbjct: 115 SAALEIAIIENVQRADLNAMEEAQGYHALATSYNHSADDIAKLVGKSRSHVANTMRLTKL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P SV+ +I + ++S GHAR L++ DP + A+ V + +SVR E L E K
Sbjct: 175 PESVQVLIAEGKLSAGHARALINAKDPAAAAKQAVEQGLSVRQVEALSHEAGVPARGTPK 234
Query: 239 IFEGSR---EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ +K+ LEK+IS +GL +S+ HR+ G I Y +QL I L
Sbjct: 235 ARGKASGADKKDADTLALEKRISDALGLKVSVDHRDPGGTVQIAYRDLDQLDEILRRLES 294
Query: 296 N 296
Sbjct: 295 G 295
>gi|89092255|ref|ZP_01165209.1| ParB family protein [Oceanospirillum sp. MED92]
gi|89083343|gb|EAR62561.1| ParB family protein [Oceanospirillum sp. MED92]
Length = 292
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 172/297 (57%), Gaps = 8/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LG+GL AL+ V+ + + + + + I + PR E
Sbjct: 1 MA---KKRGLGKGLDALLSSVSDVEEKVSTQEAETLDGYRLLPVDVIQRGRYQPRRDIEP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI++ G++QP++VR ID+ Y+IIAGERR+RA +MA L E+P I+++V +++
Sbjct: 58 QALEELSNSIRAQGVMQPIVVRPIDSDRYEIIAGERRWRATQMADLLEIPAIVKDVPDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR++LNP+EEA+ ++L E+ TQ ++ VGKSRS V N+LR++ L
Sbjct: 118 AIAMALIENIQRENLNPIEEAISLQRLQDEFELTQQEVADAVGKSRSAVTNLLRLMNLTD 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++M+ ++ +GHAR L + + AQ I + +SVR TE LV++ + ++
Sbjct: 178 EVKKMLEYGDLEMGHARALLSLEDDKQIEAAQEIAGQGLSVRQTEALVKKIQQGDKPAEE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + + L ++S + +SI + KG+ I Y+ E L I LL
Sbjct: 238 KAKPAPNERLNV--LSGELSQRFSAKVSISENAKGKGKITINYDDAEMLDGILQLLK 292
>gi|138897062|ref|YP_001127515.1| site-specific DNA-binding protein [Geobacillus thermodenitrificans
NG80-2]
gi|134268575|gb|ABO68770.1| Site-specific DNA-binding protein [Geobacillus thermodenitrificans
NG80-2]
Length = 305
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 107/289 (37%), Positives = 172/289 (59%), Gaps = 14/289 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL ++ + + E+ +SI + PNP+ PR F+ E +E+L
Sbjct: 22 KGLGKGINALFNNLSLNGE---------EETIFEVSISDLHPNPYQPRKTFQPEAIEELK 72
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI HGI+QPLIVR ++I+ GERR+RAAK A+L VPV++R + ++ +E A++
Sbjct: 73 QSILQHGILQPLIVRR-SLKGFEIVVGERRYRAAKEANLPSVPVVVRELTDEQMMEFALL 131
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L+ + TQ +I S VGKSR H+AN LR+L LP V++++
Sbjct: 132 ENLQREDLNPIEEAMAYKMLMDKLHLTQEEIASRVGKSRPHIANHLRLLSLPPEVQKLLI 191
Query: 188 KEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+S+GH R L+ + + V + ++VR E+LVQ+ N+ R+
Sbjct: 192 DGTLSMGHGRALLGLKKKGKMKSIVERTVREGLNVRQLEKLVQQM-NENVSRETSKRKPP 250
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
EK ++ + E + K G N++IK KG+ I++ + E L+ I LL
Sbjct: 251 EKSVFIRESESLLREKFGTNVTIKQSKKKGKIEIEFFSPEDLERILELL 299
>gi|71083060|ref|YP_265779.1| chromosome partitioning protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062173|gb|AAZ21176.1| chromosome partitioning protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 282
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 127/299 (42%), Positives = 179/299 (59%), Gaps = 21/299 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M N K+ LGRGL++LIGE I + + +SI +V N PR F++
Sbjct: 1 MDANKIKKGLGRGLSSLIGETKVEI------------NVNKVSISDLVRNKFQPRKTFDA 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L+DL SIK GIIQP+IVR DN Y+IIAGERR+ +A+ A L EVPV+I N+D+
Sbjct: 49 ESLQDLTNSIKERGIIQPIIVRRSSEDNSKYEIIAGERRWLSAQKAGLHEVPVVITNIDD 108
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
SLE AI+ENVQR DLN +EEA GY++LI E+ Y Q + +GKSRSH+AN LR+L L
Sbjct: 109 LKSLEFAIIENVQRNDLNVIEEAQGYQRLIEEFSYDQEKVAQFIGKSRSHIANCLRLLNL 168
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P +V ++I+ +++S GHA+ LV + +A I+ K +SVR +E V+ K
Sbjct: 169 PQAVLKLIQTQKLSAGHAKILVGLDNAEFVANKIIEKNLSVRQSENFVKIFKT------K 222
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEN 296
K+ L LE I K+GLN+ IK+ +NN G ++Y+ +QL I ++ N
Sbjct: 223 KHSLKTSKDINLQVLENSIREKIGLNVLIKNKKNNSGSLLLEYKDLDQLNKIIEIIKSN 281
>gi|134096561|ref|YP_001101636.1| chromosome partitioning protein [Herminiimonas arsenicoxydans]
gi|133740464|emb|CAL63515.1| Chromosome partitioning protein ParB [Herminiimonas arsenicoxydans]
Length = 299
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 104/296 (35%), Positives = 169/296 (57%), Gaps = 11/296 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++ LGRGL AL+G + IP + + + + + PR + L
Sbjct: 4 KKQKGLGRGLEALLGGATDF----NEAVAAIPGAPSTLQVSDMQAGKYQPRTRMDEGALN 59
Query: 65 DLCQSIKSHGIIQ----PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+L SIK+ G++Q I Y+IIAGERRFRAA++A L+EVPV+++ VD+++
Sbjct: 60 ELAASIKAQGLLQAILVRPIAAHNGRDRYEIIAGERRFRAAQLAGLTEVPVLVKEVDDEA 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G +LI+++ +T VG+SRS V+N+LR+L L
Sbjct: 120 AAAMALIENIQREDLNPLEEAQGIHRLIADFNFTHEQAAHAVGRSRSAVSNLLRLLNLAK 179
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ +I +GHAR L V ++LA +V+K+MSVR+ E+LV ++ K
Sbjct: 180 PVQTMLMAGDIDMGHARALLAVDAGTQITLANQVVAKRMSVREAEKLVVRATLEQATGSK 239
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+EK + + LE+++S + ++IK NKGQ I++ + L I + L
Sbjct: 240 PRANGKEKSRDIARLEEELSDALATQVAIKLGAKNKGQLVIEFAGLDALDGIIAKL 295
>gi|56422024|ref|YP_149342.1| stage 0 sporulation protein J [Geobacillus kaustophilus HTA426]
gi|261420897|ref|YP_003254579.1| parB-like partition protein [Geobacillus sp. Y412MC61]
gi|297531682|ref|YP_003672957.1| parB-like partition protein [Geobacillus sp. C56-T3]
gi|319768568|ref|YP_004134069.1| parB-like partition protein [Geobacillus sp. Y412MC52]
gi|56381866|dbj|BAD77774.1| stage 0 sporulation protein J (antagonist of Soj) [Geobacillus
kaustophilus HTA426]
gi|261377354|gb|ACX80097.1| parB-like partition protein [Geobacillus sp. Y412MC61]
gi|297254934|gb|ADI28380.1| parB-like partition protein [Geobacillus sp. C56-T3]
gi|317113434|gb|ADU95926.1| parB-like partition protein [Geobacillus sp. Y412MC52]
Length = 289
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 109/289 (37%), Positives = 179/289 (61%), Gaps = 11/289 (3%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G++AL ++ + + E+ +SIH + PNP+ PR F+ E +E+L
Sbjct: 3 KGLGKGISALFDNLSLN------ELNGKEETVREVSIHDLHPNPYQPRKTFQPEAIEELK 56
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI HGI+QPLIVR + NG ++I+ GERR+RAAK A+L VPV++R + ++ +E A++
Sbjct: 57 QSILQHGILQPLIVRRVPNG-FEIVVGERRYRAAKEANLPSVPVVVRELTDEQMMEFALL 115
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L+ + TQ ++ S VGKSR H+AN LR+L LPS V++++
Sbjct: 116 ENLQREDLNPIEEAMAYKMLMDKLHLTQEEVASRVGKSRPHIANHLRLLSLPSDVQKLLI 175
Query: 188 KEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+S+GH R L S S+ + + + ++VR E+L+Q+ N+ R+
Sbjct: 176 DGTLSMGHGRALLGLKQKSKMKSIVERTIREGLNVRQLEKLIQQA-NENVSRETSKRKPP 234
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
EK ++ + E + K G N++IK +G+ I++ + E L+ I LL
Sbjct: 235 EKSVFIRESESLLREKFGTNVTIKQTRKRGKIEIEFFSPEDLERILELL 283
>gi|305666519|ref|YP_003862806.1| putative chromosome partitioning protein parB [Maribacter sp.
HTCC2170]
gi|88708786|gb|EAR01021.1| putative chromosome partitioning protein parB [Maribacter sp.
HTCC2170]
Length = 300
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 96/298 (32%), Positives = 166/298 (55%), Gaps = 6/298 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP-EKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I S +K + + + + + +I NP PR+ F
Sbjct: 1 MAKATKKQALGRGLSALLKDPENDIKSASDKNADKVVGNIVELDVDAIEVNPFQPRSNFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L++L SI+ G+IQP+ VR +D Y++++GERRFRA+K+ L +P IR +++
Sbjct: 61 DEALQELATSIRELGVIQPITVRKLDFNKYQLVSGERRFRASKLIGLKTIPAYIRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E AL Y++LI E TQ + VGK RS + N +R+L+L
Sbjct: 121 ESLEMALVENIQRQDLDPIEIALSYQRLIDEIQLTQEKLSERVGKKRSTITNYMRLLRLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ IR +S+GH RTLV+ + I+ + +SVR+TE V + ++
Sbjct: 181 PIIQTGIRDGFVSMGHGRTLVNIEKKEDQISLYEKIIGESLSVRETERAV-KAYHEGGTN 239
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
K + K+++ + +++ KG+ I + + E+ + I ++
Sbjct: 240 SKEVRKIAVLPVFAKKASKELTEHLSTKVAVNASEKGKGKITIPFNSEEEFQRIKKMI 297
>gi|315925599|ref|ZP_07921809.1| stage 0 sporulation protein J [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621140|gb|EFV01111.1| stage 0 sporulation protein J [Pseudoramibacter alactolyticus ATCC
23263]
Length = 300
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 173/304 (56%), Gaps = 14/304 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQ--------SIDSPEKKTETIPESQDCISIHSIVPNPH 52
M+ K LG+GLAALI E + D + + ++I I P+
Sbjct: 1 MATRKHK-GLGKGLAALISEDVHFDDSGDIIAGDQAGSEAPAPDQLVFEVAIDKIRPSKG 59
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI 112
PR F+ + LE+L SI+ HGI+QPL+V+ D G I AGERR+RA+++A L +VPVI
Sbjct: 60 QPRKQFDKQALEELSVSIREHGILQPLVVKPEDKGYSII-AGERRWRASRIAGLKQVPVI 118
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
+R++ + +EIA++ENVQR+DLNP+EEA+ YE L Y TQ +IG +GKSR+ V N
Sbjct: 119 VRDLPARDVIEIALIENVQREDLNPIEEAMAYEHLTKAYHLTQGEIGIRIGKSRTAVTNT 178
Query: 173 LRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
+R+LKLP SVREM+ ++ +S GHAR L+ DP +A +++K++ + E+ +
Sbjct: 179 MRLLKLPESVREMVLEDLLSSGHARALLGLEDPRQMA--VLAKEIVQKKYSVRETEKKVQ 236
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI--KHRNNKGQFCIKYETNEQLKIIC 290
K K E++ Y+ D+E + + + I + + KG+ + Y + E L I
Sbjct: 237 ALKNPKKPRPKIERDPYIVDVEDHLRDQFKTGVRIIPQGKKGKGKIELAYYSLEDLNRIL 296
Query: 291 SLLG 294
LL
Sbjct: 297 DLLK 300
>gi|326797860|ref|YP_004315679.1| parB-like partition protein [Sphingobacterium sp. 21]
gi|326548624|gb|ADZ77009.1| parB-like partition protein [Sphingobacterium sp. 21]
Length = 309
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 172/308 (55%), Gaps = 16/308 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTET---------IPESQDCISIHSIVPNP 51
M+ K LG+GL+AL+ + ++ + ++ P S I I +I NP
Sbjct: 1 MAQ-QRKTGLGKGLSALLNDTDEVVKQTAASQQSTAVGIGKDVPPGSISQIKIDAIEVNP 59
Query: 52 HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPV 111
PR F++E L +L SIK G+IQP+ VR + NG Y++I+GERR RA+++A L+E+P
Sbjct: 60 FQPRTDFDAEALNELADSIKLQGLIQPITVRKMGNGNYQLISGERRLRASRIAGLTEIPA 119
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
IR +++ LE+A++EN+QR++LN +E AL ++++I E Q ++G V K+RS V N
Sbjct: 120 YIRTANDQQMLEMALIENIQRENLNAIEVALSFQRMIDECNLKQEELGDRVSKNRSTVTN 179
Query: 172 ILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
LR+LKLP +++ IR ++S+GHAR + L + Q I+ K +SVR EELV+
Sbjct: 180 YLRLLKLPPAIQASIRDGKLSMGHARALINVADVDKQLYIFQEIIEKGLSVRKVEELVRL 239
Query: 229 QD-NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS--IKHRNNKGQFCIKYETNEQ 285
+ + + + K + ++ ++SK + +K + KG I + + +
Sbjct: 240 VNDSTYKNKAKPDTKEKPLSFEFQKIQDDLASKFSTKVKLNVKSKGGKGTIEIPFMSEDD 299
Query: 286 LKIICSLL 293
L I LL
Sbjct: 300 LSRILELL 307
>gi|28379583|ref|NP_786475.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum WCFS1]
gi|254557726|ref|YP_003064143.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum JDM1]
gi|300769522|ref|ZP_07079408.1| stage 0 DNA-binding protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|28272423|emb|CAD65347.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum WCFS1]
gi|254046653|gb|ACT63446.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum JDM1]
gi|300492937|gb|EFK28119.1| stage 0 DNA-binding protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 296
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 109/301 (36%), Positives = 173/301 (57%), Gaps = 19/301 (6%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S + + LGRG+ AL +VN+ E+ + + I NP+ PR F+
Sbjct: 3 SKDKDNKALGRGIGALFADVNEPAS---------EEAVVDLDLKDIHANPYQPRRTFDQT 53
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L SI+ G+ QP+IVR D Y+IIAGERRFRA+K+A + +P I+R+V +
Sbjct: 54 ALKELASSIEKSGVFQPIIVRQPDAELNKYEIIAGERRFRASKLAHQTTIPAIVRDVTEE 113
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+E+A++EN+QR+DL PLEEA Y+ L+ + TQ ++ +GKSR ++AN LR+L LP
Sbjct: 114 QMMEVAVLENLQREDLTPLEEAAAYDSLMKKLKLTQAEVSKRLGKSRPYIANYLRLLGLP 173
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPL---SLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V++ I+K ++S+G ARTL+S D LA+ +V M+VR E++V + + ++
Sbjct: 174 DGVKQYIQKGQLSMGQARTLLSLKDKTKLAPLAKRVVKDNMTVRQLEQIVARYNGESKEP 233
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK---GQFCIKYETNEQLKIICSLL 293
K K Y+ E+++ K G +SI+ + NK G+ I Y +NE L I +L
Sbjct: 234 AKKVAPK--KSPYIRASEEQLQEKFGTAVSIQTKANKADQGKIEIPYLSNEDLTRILEIL 291
Query: 294 G 294
Sbjct: 292 S 292
>gi|325285164|ref|YP_004260954.1| parB-like partition protein [Cellulophaga lytica DSM 7489]
gi|324320618|gb|ADY28083.1| parB-like partition protein [Cellulophaga lytica DSM 7489]
Length = 301
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 99/298 (33%), Positives = 167/298 (56%), Gaps = 5/298 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE-KKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I+S + K + + + + + I NP PR++F
Sbjct: 1 MAKATKKQALGRGLSALLKDPENDINSADDKNADKVVGNIIELDLDLIEVNPFQPRSHFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SIK G+IQP+ VR ++ Y++++GERRFRA+K+ L +P IR +++
Sbjct: 61 EEALVELSTSIKELGVIQPITVRKLEFNKYQLVSGERRFRASKLLGLETIPAYIRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E AL Y++LI E TQ + VGK RS + N LR+LKL
Sbjct: 121 ESLEMALVENIQRQDLDPIEIALSYQRLIDEIQLTQEKMSERVGKKRSTITNYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ IR +S+GH R L++ + IV+ +SVR+TE+ V+E +
Sbjct: 181 PIIQTGIRDGFVSMGHGRALINVEKKSDQIDLYEKIVANNLSVRETEKAVKEHQEGGKSA 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
K + + + ++ + KI + +++ KG+ I + + E + L+
Sbjct: 241 KPTAKKTTKSPDFVKEGSAKIEKHLATKVAVTATEKGKGKITISFTSAEDFDRLKKLI 298
>gi|91762514|ref|ZP_01264479.1| chromosome partitioning protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718316|gb|EAS84966.1| chromosome partitioning protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 282
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 125/299 (41%), Positives = 176/299 (58%), Gaps = 21/299 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M N K+ LGRGL++LIGE + + + +SI +V N PR F+
Sbjct: 1 MDANKIKKGLGRGLSSLIGETKAEV------------NINKVSISDLVSNKFQPRKIFDE 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L+DL SIK GIIQP+IVR DN Y+IIAGERR+ +A+ A L EVPV+I VD+
Sbjct: 49 ESLQDLTNSIKERGIIQPIIVRKSSEDNSKYEIIAGERRWLSAQKAGLHEVPVVITKVDD 108
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
SLE AI+ENVQR DLN +EEA GY++LI E+ Y Q + +GKSRSH+ N LR+L L
Sbjct: 109 LKSLEFAIIENVQRNDLNVIEEAQGYQRLIEEFSYDQEKVAQFIGKSRSHITNCLRLLNL 168
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P +V ++I+ +++S GHA+ LV + +A I+ K +SVR +E V+ K
Sbjct: 169 PQAVLKLIQTQKLSAGHAKILVGLDNAEFVANKIIEKNLSVRQSENFVKIFKT------K 222
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEN 296
K+ L LE I K+GLN+ IK+ +NN G ++Y+ +QL I ++ N
Sbjct: 223 KHSLKTSKDINLQVLENSIREKIGLNVLIKNKKNNSGSLLLEYKDLDQLNKIIEIIKSN 281
>gi|110835595|ref|YP_694454.1| chromosome partitioning protein ParB [Alcanivorax borkumensis SK2]
gi|110648706|emb|CAL18182.1| chromosome partitioning protein ParB [Alcanivorax borkumensis SK2]
Length = 328
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 95/309 (30%), Positives = 173/309 (55%), Gaps = 20/309 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGE-------------VNQSIDSPEKKTETIPESQDCISIHSI 47
M+ KR L +GL AL+ NQ S E + + +
Sbjct: 25 MA-AKRKRGLSKGLDALLSSNESYQRHQEEVSLQNQGETSGEPSLRPRDGELRHLPVECM 83
Query: 48 VPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLS 107
+ PR + LE+L +SI++ G++QP++VR + + Y+IIAGERR+RAA+MA L
Sbjct: 84 ERGRYQPRRDMSPDALEELAESIRAQGVMQPIVVRPLGDKRYEIIAGERRWRAAQMAELD 143
Query: 108 EVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRS 167
+P +IR V +++++ +A++EN+QR++LNP+EEA+ +L E+G T + VGKSR+
Sbjct: 144 TIPAVIREVPDEAAIAMALIENIQRENLNPMEEAIALGRLKEEFGLTHQQVADAVGKSRA 203
Query: 168 HVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEEL 225
V N+LR++ L + V++++ ++ +GHAR L ++ + + A+ +V+K +SVR TEEL
Sbjct: 204 MVTNLLRLMSLETDVKKLLEHGDLEMGHARALLALTGNKQVEAARTVVAKGLSVRQTEEL 263
Query: 226 VQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQ 285
V++ + K + + + + L +S ++G + I+ + KG+ I Y + ++
Sbjct: 264 VRDFEKAKPAKPAAPKE----DPNVKALISDLSDRLGAPVQIQQQGKKGKLVISYNSLDE 319
Query: 286 LKIICSLLG 294
L I + +
Sbjct: 320 LDGILAHIK 328
>gi|284034932|ref|YP_003384863.1| parB-like partition protein [Kribbella flavida DSM 17836]
gi|283814225|gb|ADB36064.1| parB-like partition protein [Kribbella flavida DSM 17836]
Length = 325
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 96/318 (30%), Positives = 164/318 (51%), Gaps = 30/318 (9%)
Query: 9 RLGRGLAALIGE-------------VNQSIDSPEKKTETIPESQD--------------C 41
RLGRGL ALI + +P + ++
Sbjct: 4 RLGRGLGALIPSNPAPGSNASLGSKSSSIPGAPPVRQDSAGAGVRGSGELAAVPGAEFAE 63
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
I++ I PNP PR+ F+ + + +L S+K G++QP++VR ++ Y+++ GERR+RA
Sbjct: 64 IAVDKITPNPKQPRSVFDEDAMAELVHSVKEIGLLQPIVVRRLEEDRYELVMGERRWRAT 123
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
+ A L+ +P I+R+ + L A++EN+ R LNPLEEA Y+Q++ ++G TQ + +
Sbjct: 124 QEAGLTTIPAIVRDTSDDVMLRDALLENLHRSQLNPLEEAAAYQQMLDDFGCTQEVLATR 183
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMS 218
+G+SR ++N LR+LKLP+SV+ + +S GHAR L S LAQ IV++ +S
Sbjct: 184 IGRSRPQISNTLRLLKLPASVQRRVAAGVLSAGHARALLGLPSGDAIERLAQRIVAEGLS 243
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCI 278
VR EE+V D + ++ L DL ++S + + + KG+ +
Sbjct: 244 VRTVEEIVAMGDLSADDPVPARRRNKPVAPRLIDLADRLSDRFETRVKVDLGKTKGKITV 303
Query: 279 KYETNEQLKIICSLLGEN 296
++ + + L+ I L+ N
Sbjct: 304 EFASIDDLERIVGLMDPN 321
>gi|296134490|ref|YP_003641737.1| parB-like partition protein [Thermincola sp. JR]
gi|296033068|gb|ADG83836.1| parB-like partition protein [Thermincola potens JR]
Length = 288
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 106/291 (36%), Positives = 170/291 (58%), Gaps = 11/291 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K+ LG+GL ALI N D ++I IV N PR F+ E LE
Sbjct: 1 MNKKGLGKGLNALIRSNNDFEDRA---------GIVELNISDIVRNAKQPRQEFDQEKLE 51
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ +GIIQP+IVR + N Y++IAGERR+RAA++A L ++P +I+ V ++ E+
Sbjct: 52 ELAASIRQYGIIQPVIVRRLTNKKYELIAGERRWRAARLAGLDKIPAVIKEVSDREITEL 111
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEAL Y+QL+ E+G TQ ++ VGKSRS +AN +R+L LP ++
Sbjct: 112 ALIENIQREDLNPIEEALAYKQLMEEFGLTQEELSKRVGKSRSFIANSVRLLNLPPEAQQ 171
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
M++ ++S GHAR L+ + A + ++ Q + KK R
Sbjct: 172 MVQTGQLSAGHARALLVIERAIDQANLAKKIVEKNLSVRQIEQLVKKITSEGKKKIPRKR 231
Query: 245 EKEKYL--TDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + L D+E+++ K+G + IKH + +G I+Y +++ L+ I L+
Sbjct: 232 RESESLIVKDIEEQMQGKLGTKVRIKHGSKRGMIEIEYYSDDDLQRIVDLI 282
>gi|167582843|ref|ZP_02375717.1| stage 0 sporulation protein J, putative [Burkholderia thailandensis
TXDOH]
Length = 295
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 179/299 (59%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G + I + + +++ + + PR +
Sbjct: 1 MNAVAKKKGLGRGLEALLGGSADITEVV-----KIEGAPNVLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + ++IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKFEIIAGERRFRAARLAGLEEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAM 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTHTTKSEPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + N+ IK R +GQ I + + L+ I + L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGN 292
>gi|119718910|ref|YP_925875.1| chromosome segregation DNA-binding protein [Nocardioides sp. JS614]
gi|119539571|gb|ABL84188.1| chromosome segregation DNA-binding protein [Nocardioides sp. JS614]
Length = 318
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 92/314 (29%), Positives = 159/314 (50%), Gaps = 19/314 (6%)
Query: 1 MSN--NYSKRRLGRGLAALIGEVNQS------------IDSPEKKTETIPESQDCISIHS 46
MS +R LGRGL +LI Q+ S + + + +
Sbjct: 1 MSTHRPAQRRGLGRGLGSLIPTAPQADRDDGSAPAGRAPGSGVELAPVLGAHFAEVPVGH 60
Query: 47 IVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL 106
I PN PR F+ E + +L SI+ G++QP++VR Y+++ GERR+RA++ A L
Sbjct: 61 IRPNRVQPRQVFDEEAMAELVHSIREIGVLQPVVVRRHGPEDYELVMGERRWRASQEAGL 120
Query: 107 SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSR 166
VP I+R D+ L A++EN+ R LNPLEEA Y Q++ ++G T ++ S +G+SR
Sbjct: 121 DTVPAIVRETDDDDMLRDALLENLHRAQLNPLEEAAAYSQMLEDFGCTHEELASRIGRSR 180
Query: 167 SHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTE 223
++N LR+LKL +V+ + +S GHAR+L+ LAQ +V++ +SVR E
Sbjct: 181 PQISNTLRLLKLSPAVQRRVAAGVLSAGHARSLLAIEDPELQDRLAQRVVAEGISVRGLE 240
Query: 224 ELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETN 283
E+V ++ L DL +++S ++ + + KG+ +++ +
Sbjct: 241 EIV--ALRDVGAPAPRAARAKPVAPGLADLAERLSDRLETRVKVDLGRTKGKITVEFASL 298
Query: 284 EQLKIICSLLGEND 297
+ L+ I ++ +
Sbjct: 299 DDLRRIVDIMDPRN 312
>gi|313902795|ref|ZP_07836192.1| parB-like partition protein [Thermaerobacter subterraneus DSM
13965]
gi|313466915|gb|EFR62432.1| parB-like partition protein [Thermaerobacter subterraneus DSM
13965]
Length = 298
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 103/303 (33%), Positives = 169/303 (55%), Gaps = 19/303 (6%)
Query: 1 MSNNYSKRRLGRG-----LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR 55
MS N KR L RG L AL+ V + + + + + I PNP+ PR
Sbjct: 1 MSRN--KRGLARGIDVKGLDALLPGVRPEAAAA-------GQQVEQVPVDRIRPNPYQPR 51
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
F+ + L +L +S++ HGI+QPL++R +G ++AGERR+RAA+ A L VP ++R
Sbjct: 52 RQFDPDALAELVESVRQHGIVQPLLLRPEGDGYR-LVAGERRWRAAQAAGLETVPAVVRE 110
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+ +EIA+VEN+QR+DLNP+EEA GY L E G TQ + VGKSRSH+AN++R+
Sbjct: 111 FSDVEMMEIALVENLQREDLNPIEEAQGYRMLCEELGLTQEQVSQRVGKSRSHIANLMRL 170
Query: 176 LKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
L LP +R ++ + ++S GHA+ ++ S + LA ++S+ ++VR E+ V
Sbjct: 171 LSLPDDLRRLVAEGKLSTGHAKVLLSVPSPVEMRRLAAEVLSEGLTVRQLEQRVAGGGK- 229
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
+R+ E + DL ++ + ++++ R +GQ I+Y + + L+ I +
Sbjct: 230 APRRRPGASRQPAPEPEVQDLIDRLQRALNTRVALRGRGPRGQIVIEYYSWDDLERILAR 289
Query: 293 LGE 295
L
Sbjct: 290 LES 292
>gi|295697827|ref|YP_003591065.1| parB-like partition protein [Bacillus tusciae DSM 2912]
gi|295413429|gb|ADG07921.1| parB-like partition protein [Bacillus tusciae DSM 2912]
Length = 287
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 110/296 (37%), Positives = 174/296 (58%), Gaps = 17/296 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ LG+GL ALI ++N S D P + + + PNP+ PR F
Sbjct: 1 MAK-GKGPSLGKGLGALIPQINVSPDDP----------VSSVPLEELRPNPYQPRREFAE 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L +S++ +GI+QPL+VR + Y+I+AGERRFRAA+ A L+EVPV++RN+ ++
Sbjct: 50 EKLAELVESVREYGILQPLVVRRV-LSGYEIVAGERRFRAAERAGLAEVPVVVRNLSDRE 108
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DLNP+E A Y L+ E+ TQ + VG+SRSHVAN+LR+L LPS
Sbjct: 109 VMEIALIENLQREDLNPIEVAEAYATLMREFSMTQEMVAERVGQSRSHVANMLRLLNLPS 168
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
VRE + + +++GHAR L LA+ IV + +SVR E LV ++ +
Sbjct: 169 EVRESVSRGTLTMGHARALLALSDPDQQTKLAERIVEEDLSVRAVEHLVHRLNSF--VSR 226
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + + + L E+ + +G + I +G+ I+Y +N+ L+ + +LL
Sbjct: 227 ETRKPAPRENPTLRHYEEVLRVSLGTGVKIYQGKKRGKIEIEYYSNDDLQRLLALL 282
>gi|209966082|ref|YP_002298997.1| chromosome partitioning protein ParB [Rhodospirillum centenum SW]
gi|209959548|gb|ACJ00185.1| chromosome partitioning protein ParB [Rhodospirillum centenum SW]
Length = 299
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 113/298 (37%), Positives = 183/298 (61%), Gaps = 16/298 (5%)
Query: 3 NNYSKR--RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+ KR LGRGL+AL G+ + P + + I + P + PR F+
Sbjct: 7 EDSRKRPGGLGRGLSALFGDAAPAEGEPADRARLT----RLVPIDQLHPGRYQPRRRFDD 62
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGL-----YKIIAGERRFRAAKMASLSEVPVIIRN 115
E + L S++ G++QPL+VR ++ Y+IIAGERR+RAA++A L EVPV++R
Sbjct: 63 EEMRALVDSVRERGVLQPLLVRKDEDSPPGAPSYEIIAGERRWRAAQLAGLHEVPVLVRT 122
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+ ++ +LEIA++EN+QR+DL PLEEA G+ +L+ E+ +TQ D+ VGKSRSHVAN+LR+
Sbjct: 123 LTDREALEIALIENIQRQDLTPLEEAEGFRRLMDEFSHTQEDLARAVGKSRSHVANMLRL 182
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L LP V+ ++++ ++S+GHAR L++ DP +LAQ +V + ++VR TE+LV++
Sbjct: 183 LALPDEVKRLVQEGQLSMGHARALLTAHDPAALAQEVVKRGLNVRQTEQLVKDAAA---- 238
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + K LE+++S+ +GL + + R KG I Y+T +QL + S +
Sbjct: 239 -GRQAKLPAVKPPDTVALEREVSTALGLKVVVAGRGPKGVLQIHYKTLDQLDGVLSRI 295
>gi|254520707|ref|ZP_05132763.1| stage 0 sporulation protein J [Clostridium sp. 7_2_43FAA]
gi|226914456|gb|EEH99657.1| stage 0 sporulation protein J [Clostridium sp. 7_2_43FAA]
Length = 283
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 112/292 (38%), Positives = 179/292 (61%), Gaps = 15/292 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI N S ++ + ISI+ I N PR F+ E + +
Sbjct: 3 KKSALGKGLGALIPNDNGSKENNKPSV---------ISINLIRSNEDQPRKAFDDEKIAE 53
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSIK HGIIQP+I+ DN + AGERR+RAAK+ L E+P II + K+ LE++
Sbjct: 54 LAQSIKEHGIIQPIILNKKDNSYIIV-AGERRWRAAKLLGLKEIPAIIMELTEKNILEVS 112
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEA+ Y++L+S++ TQ ++ VGKSR ++N++R+ L +V++
Sbjct: 113 LIENIQRQDLNPIEEAIAYKKLLSDFNLTQEELSKRVGKSRVAISNVIRLTNLCETVKQY 172
Query: 186 IRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ E I+ GH R L+S DP AQ ++ +K+SVR+ E LV+ ++K+++ K
Sbjct: 173 LIDEVITEGHGRVLLSIEDPEIQCEVAQKVIDEKLSVRELERLVRYLGSEKKEKDKEKV- 231
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
RE Y D+ +++ + G +SI ++NNKG+ I+Y +NE L+ I ++
Sbjct: 232 -REINPYYKDVTERLQNYFGTKVSISNKNNKGKIEIEYYSNEDLQRILEIIN 282
>gi|298208002|ref|YP_003716181.1| putative ParB-like chromosome partitioning protein [Croceibacter
atlanticus HTCC2559]
gi|83850643|gb|EAP88511.1| putative ParB-like chromosome partitioning protein [Croceibacter
atlanticus HTCC2559]
Length = 303
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 165/301 (54%), Gaps = 7/301 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE-KKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I + E K + + + + + I NP PR F
Sbjct: 1 MAKATKKQALGRGLSALLKDPENDIKTAEDKNADKVVGNIVELELDVIEVNPFQPRTSFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SI+ G+IQP+ VR +D Y++++GERRFRA+K+ L +P IR +++
Sbjct: 61 EETLRELATSIRELGVIQPITVRKLDFNKYQLVSGERRFRASKLVGLETIPAYIRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QRKDL+P+E AL Y++L+ E TQ + VGK RS ++N LR+LKL
Sbjct: 121 ESLEMALVENIQRKDLDPIEIALSYQRLMDEINLTQEQLSDRVGKKRSTISNYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ +R +S+GH R L++ D + ++ +SVRDTE LV++ K
Sbjct: 181 PIIQTGMRDGFVSMGHGRALINIDDTSQQLDIYEKVIEDSLSVRDTEALVRDLQQGKSST 240
Query: 237 KKIFE--GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
KK +E K ++ S G +++K + G I + + E K + L+
Sbjct: 241 KKKASANPPQELSKPFQKAQQNFSEYFGAKVNVKVQKKGNGNIVIPFSSEEDFKRLKKLI 300
Query: 294 G 294
Sbjct: 301 S 301
>gi|238926666|ref|ZP_04658426.1| stage 0 DNA-binding protein [Selenomonas flueggei ATCC 43531]
gi|238885612|gb|EEQ49250.1| stage 0 DNA-binding protein [Selenomonas flueggei ATCC 43531]
Length = 332
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 102/310 (32%), Positives = 159/310 (51%), Gaps = 15/310 (4%)
Query: 3 NNYSKRRLGRGLAAL--------IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNP 54
LGRGL A + S T + + I +I PN P
Sbjct: 2 KKAKTGGLGRGLGAFGLGKNAMPLPPAAVSEKYNAPPAATSAGTPAALPIDAIQPNRFQP 61
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R F+ LE+L +SI HGI+QPL VR I +G Y++IAGERR RAAK+A L+ VP + R
Sbjct: 62 RCEFDEAALEELRESIVRHGILQPLTVREIGDGKYELIAGERRLRAAKLAGLTSVPALFR 121
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
++ E+A++EN+QR+DLNP+EEA +++L++E+G +Q + V +SRS +AN +R
Sbjct: 122 AANDAEMAEMALIENLQREDLNPIEEAHAFQRLLTEFGLSQEQLAHCVARSRSAIANSVR 181
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDN 231
+L+L V+ I +++G AR L++ A+ I ++S R E LV+
Sbjct: 182 LLRLAKEVQAFIANGVLTMGQARPLLALETAALQREAAEYIQEHELSARGAEALVKRLIK 241
Query: 232 KKEKRKKIFEGSREKEKYL--TDLEKKISSKVGLNISI--KHRNNKGQFCIKYETNEQLK 287
KK EK L + E +++ +G + I + KG+ I Y + E L+
Sbjct: 242 DPHALKKAERPKTEKNPDLFMREAEDRLTHSLGTKVRIHASSKEGKGRLEISYFSAEDLE 301
Query: 288 IICSLLGEND 297
+ +LL D
Sbjct: 302 RLLALLTALD 311
>gi|116630295|ref|YP_815525.1| Spo0J-like protein [Lactobacillus gasseri ATCC 33323]
gi|238853717|ref|ZP_04644084.1| stage 0 sporulation protein J [Lactobacillus gasseri 202-4]
gi|300362902|ref|ZP_07059072.1| chromosome partitioning protein SpoOJ [Lactobacillus gasseri
JV-V03]
gi|116095877|gb|ABJ61029.1| chromosome segregation DNA-binding protein [Lactobacillus gasseri
ATCC 33323]
gi|238833653|gb|EEQ25923.1| stage 0 sporulation protein J [Lactobacillus gasseri 202-4]
gi|300352952|gb|EFJ68830.1| chromosome partitioning protein SpoOJ [Lactobacillus gasseri
JV-V03]
Length = 293
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 105/296 (35%), Positives = 163/296 (55%), Gaps = 11/296 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S KR LGRGL AL E Q ++ E I + I PNP+ PR F+++
Sbjct: 5 SKEPKKRGLGRGLEALFDESPQVQETEE---------ITEIPLDEIRPNPYQPRKTFDNK 55
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L +SIK +G+ QP+I+R Y+IIAGERRFRA+K+A +P IIR D
Sbjct: 56 SLKELSESIKENGVFQPIIIRK-SVNGYEIIAGERRFRASKLAKKETIPAIIRKFDEAQM 114
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A++EN+QR+DL PLEEA YE L G TQ ++ +GKSR ++AN LR+L LP
Sbjct: 115 MEVAVLENLQREDLTPLEEAQAYEMLQKNLGLTQAEVSKRLGKSRPYIANYLRLLTLPQK 174
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ ++++ E+S+G ARTL+ D + + + +L EK KK +
Sbjct: 175 TKRLLQRGELSMGQARTLLGLKDKDGIDDLAKKVVKNGITVRQLESLVAKLNEKEKKPKK 234
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ +K ++ E +++ K G +++I + G I + + ++L I LLG N
Sbjct: 235 KAIKKSAFIRASESQLTDKFGTSVNITESKKGNGHLAIDFASTDELNRILDLLGIN 290
>gi|167838434|ref|ZP_02465293.1| stage 0 sporulation protein J, putative [Burkholderia thailandensis
MSMB43]
Length = 295
Score = 155 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 104/296 (35%), Positives = 178/296 (60%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVAKKKGLGRGLEALLGGSADITEAV-----KIEGAPNVLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFDFTHEQAAESVGRSRSAVSNLLRLLNLAM 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTHTTKAEPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ ++ LE+++S + N+ IK R +GQ I + + L+ I + L
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARL 289
>gi|269129159|ref|YP_003302529.1| parB-like partition protein [Thermomonospora curvata DSM 43183]
gi|268314117|gb|ACZ00492.1| parB-like partition protein [Thermomonospora curvata DSM 43183]
Length = 312
Score = 155 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 100/300 (33%), Positives = 167/300 (55%), Gaps = 9/300 (3%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD-----CISIHSIVPNPHNPRNYFESE 61
+R LGRGL ALI S E E + ++SI PNP PR++F+ E
Sbjct: 5 RRGLGRGLGALIPTGPPPGASKEGTAAPEMEPVAGAHFAELPVNSITPNPRQPRSHFDEE 64
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LE+L +SI+ G++QP++VR Y+++ GERR+RA++ A L +P I+R+ +
Sbjct: 65 ALEELAESIRIVGLLQPIVVRRTGPDSYELVMGERRWRASQRAGLETIPAIVRDTADNDM 124
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
L A++EN+ R+ LNPLEEA Y+QL+ ++G T + + +G+SR H+ N LR+L LP +
Sbjct: 125 LRDALMENLHRQQLNPLEEAAAYQQLLEDFGATHEQLAARIGRSRPHITNTLRLLNLPPA 184
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + ++ GHAR L+S P + A IV++ +SVR EE++ +D + E KK
Sbjct: 185 VQRRVAAGVLTAGHARALLSLDSPEAQEALAHRIVAEGLSVRAVEEIIAMRDLEGETPKK 244
Query: 239 IFEG-SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+G R L +L ++S + + + KG+ +++ + E L I + ++
Sbjct: 245 PRQGRKRTIAPELRELADRLSDRYETKVRVDMGRTKGKIVVEFASLEDLDRIIKAMAPDE 304
>gi|302531350|ref|ZP_07283692.1| chromosome partitioning [Streptomyces sp. AA4]
gi|302440245|gb|EFL12061.1| chromosome partitioning [Streptomyces sp. AA4]
Length = 338
Score = 155 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 33/330 (10%)
Query: 1 MSNNYSKRRLGRGLAALIG----------------------------EVNQSIDSPEKKT 32
M+ + LGRGLAALI N +
Sbjct: 1 MTE--RRGGLGRGLAALIPTGPATPPPAATEAVTSADKAAREDKGWFAANGAAGQQVAGG 58
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
E I + S+ PNP PR F+ E L +L SI+ G++QP++VR + Y+++
Sbjct: 59 EVAGAVYREIPVSSVKPNPKQPRQVFDEEALAELEHSIREFGLMQPIVVRELGEDEYELV 118
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
GERR RA++ A L +P I+R ++S L A++EN+ R LNPLEEA Y+QL+ E+
Sbjct: 119 MGERRLRASQQAELEAIPAIVRQTADESMLRDALLENIHRVQLNPLEEAAAYQQLLDEFA 178
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLA 209
T ++ +G+SR + N +R+LKLP V+ + +S GHAR L+ LA
Sbjct: 179 VTHEELAGRIGRSRPVITNTIRLLKLPLPVQRRVAAGVLSAGHARALLSLEDPDSQEELA 238
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH 269
IV++ MSVR TEE V + ++K + K + L +L ++S + + +
Sbjct: 239 ARIVAEGMSVRATEEAVTLKKSEKPPKPKAAPRKPIQAPGLQELANRLSDRFDTRVKVDL 298
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGENDFE 299
KG+ +++ + + L+ I ++ N E
Sbjct: 299 GRRKGRIVLEFGSVDDLERIVGIIDANSGE 328
>gi|120435162|ref|YP_860848.1| ParB-like chromosome partition protein [Gramella forsetii KT0803]
gi|117577312|emb|CAL65781.1| ParB-like chromosome partition protein [Gramella forsetii KT0803]
Length = 301
Score = 155 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 178/302 (58%), Gaps = 6/302 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE-KKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + + I S E K + + + + SI NP PR F
Sbjct: 1 MAKATKKQALGRGLSALLKDPDNDIKSAEDKNADKLVGHIVELEMSSIEVNPFQPRTSFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ L++L SI+ G+IQP+ VR +D G +++++GERRFRA+K+ L +P IR +++
Sbjct: 61 EDSLKELASSIRELGVIQPITVRKLDFGKFQLVSGERRFRASKLVGLDSIPAYIRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E +L Y++LI E TQ + +GK+RS +AN LR+LKL
Sbjct: 121 ESLEMALVENIQRQDLDPIEISLSYQRLIDEIQLTQEQLSERIGKNRSTIANYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ +R +S+GH RTL++ +D + I+ K +SVR+TE+LV+E + + +
Sbjct: 181 PIIQTGMRDGFLSMGHGRTLININDTQKQLEIYEKILQKSLSVRETEQLVRELNAEGKPA 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
I + + + Y + K+ + +G + +K + G+ I + + E + I L+
Sbjct: 241 SAISKKAAVPKTYKKGI-KEFTEYLGAKVDVKVTKKGSGKLTIPFSSEEDFERIKKLIRG 299
Query: 296 ND 297
+
Sbjct: 300 EE 301
>gi|149279993|ref|ZP_01886118.1| chromosome partitioning protein [Pedobacter sp. BAL39]
gi|149229190|gb|EDM34584.1| chromosome partitioning protein [Pedobacter sp. BAL39]
Length = 309
Score = 155 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 168/307 (54%), Gaps = 14/307 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDC----------ISIHSIVPN 50
M++ K LG+GL+AL+ + + + E++ ISI I N
Sbjct: 1 MTSFQRKTGLGKGLSALLDDSDAVNPPKNSGVNPVSETRTERNNPGNPIGHISISDIETN 60
Query: 51 PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
P PR F+ L +L +SIK G+IQP+ VR Y++I+GERR RA+K+A L+E+P
Sbjct: 61 PFQPRTEFDQVALLELAESIKVQGLIQPITVRQQSGNKYQLISGERRLRASKLAGLTEIP 120
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
IR+ +++ LE+A++EN+QR++LN +E AL +++++ E Q +G VGK+R+ V
Sbjct: 121 AYIRSANDQQMLEMALIENIQRENLNAIEVALSFQRMLDECNLKQEQLGERVGKNRTTVT 180
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV---SKKMSVRDTEELVQ 227
N LR+LKLP +++ IR ++IS+GHAR L++ + K +SVR EELV+
Sbjct: 181 NYLRLLKLPPAIQISIRDQKISMGHARALINVEQVEKQLFIHQEIIDKGLSVRKVEELVR 240
Query: 228 EQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQL 286
++ + K + + L+K ++SK + +K N KG I + + + L
Sbjct: 241 SINSVEVKPSRFERTPKAFSFEYQKLQKDLASKFATKVKLKVGENGKGAIEIPFVSEDDL 300
Query: 287 KIICSLL 293
I LL
Sbjct: 301 SRILELL 307
>gi|255533412|ref|YP_003093784.1| parB-like partition protein [Pedobacter heparinus DSM 2366]
gi|255346396|gb|ACU05722.1| parB-like partition protein [Pedobacter heparinus DSM 2366]
Length = 307
Score = 155 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 103/306 (33%), Positives = 171/306 (55%), Gaps = 14/306 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDC---------ISIHSIVPNP 51
M++ K LGRGL+AL+ + + + E++ I+I I NP
Sbjct: 1 MTSFQRKTGLGRGLSALLDDSESTNPPKNNGVNPVSETRQETSSNNGIGLINISEIETNP 60
Query: 52 HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPV 111
+ PR F+ L +L +SIK G+IQP+ VR Y++I+GERR RA+K+A L+++P
Sbjct: 61 YQPRTEFDQVALNELSESIKVQGLIQPITVRKQSANHYQLISGERRLRASKLAGLTQIPA 120
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
IR +++ LE+A++EN+QR++LN +E AL +++++ E Q +G VGK+R+ V N
Sbjct: 121 YIRLANDQQMLEMALIENIQRENLNAIEVALSFQRMLDECNLKQEQLGERVGKNRTTVTN 180
Query: 172 ILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV---SKKMSVRDTEELVQE 228
LR+LKLP +++ IR ++IS+GHAR L++ P + K +SVR EELV+
Sbjct: 181 YLRLLKLPPAIQISIRDQKISMGHARALINVEQPDKQLFIHQEIIDKGLSVRKVEELVRS 240
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLK 287
++ E + K ++ L+K ++SK + +K N KG I + +++ L
Sbjct: 241 INS-VEVKPKFQLKTKSVPAEYQKLQKDLASKFATKVKLKVGENGKGAIEIPFMSDDDLN 299
Query: 288 IICSLL 293
I LL
Sbjct: 300 RILELL 305
>gi|302390786|ref|YP_003826607.1| chromosome segregation DNA-binding protein [Thermosediminibacter
oceani DSM 16646]
gi|302201414|gb|ADL08984.1| chromosome segregation DNA-binding protein [Thermosediminibacter
oceani DSM 16646]
Length = 284
Score = 155 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 99/291 (34%), Positives = 170/291 (58%), Gaps = 12/291 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K+ LGRGL ALI +++ D + ISI I PN H PR F+ E L
Sbjct: 1 MTKKGLGRGLGALIPMMDEKTDEK---------NIQEISISEIRPNEHQPRKAFDDEKLS 51
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SIK HG++QP+I+R + NG Y+I+AGERR+RAA++A + ++P +++ + + ++I
Sbjct: 52 ELAASIKEHGVLQPVILRKVKNG-YEIVAGERRWRAARIAGIDKIPAVVKELTDAEVMQI 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNPLEEA Y++L+ E+G TQ ++ + +GKSRS +AN +R+L L +++
Sbjct: 111 ALIENLQREDLNPLEEAAAYKRLMEEFGMTQEELAARIGKSRSQIANTVRLLNLEPEIQQ 170
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
MI++ ++ GHAR L++ DP ++ E + K K E R
Sbjct: 171 MIKQGRLTAGHARALLAVDDPRERMKIARRITEENISVRETEEIAKTVALKAGKKREKGR 230
Query: 245 --EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
E L + +++ +G + +K KG+ I++ + ++L+ I ++
Sbjct: 231 GEEINPALLHVTEQLQKVLGTKVRVKGSERKGRIEIEFYSEDELERILEII 281
>gi|157377624|ref|YP_001476224.1| ParB family protein [Shewanella sediminis HAW-EB3]
gi|157319998|gb|ABV39096.1| ParB family protein [Shewanella sediminis HAW-EB3]
Length = 294
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 104/297 (35%), Positives = 177/297 (59%), Gaps = 14/297 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD-----CISIHSIVPNPHNPRNYFE 59
KR LG+GL AL+ + + +S + +E + ES + + + P + PR
Sbjct: 3 VKKRGLGKGLDALLS-TSHAANSKQAASEVVDESVKNDDLLILDVDLMQPGKYQPRKDMS 61
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E LE+L +SIK GIIQP++VR I +++IIAGERR+RAA++A L +VP I++ V ++
Sbjct: 62 PEALEELSESIKVQGIIQPIVVRKISPEMFEIIAGERRWRAAQLAKLDKVPCIVKQVPDE 121
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
S++ IA++EN+QR+DLN +EEA+ ++L+ E+ T I VGKSR+ V+N+LR+ L
Sbjct: 122 SAVAIALIENIQREDLNAMEEAIALQRLMEEFNLTHQQIAGAVGKSRATVSNLLRLNGLN 181
Query: 180 SSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M+ +I +GHAR L + + ++A+++ +K+++VR+TE LV + N +
Sbjct: 182 EPVKRMLEYGDIDMGHARALLAIEGDEQTTIARLVAAKELTVRETERLVTKTLNPPKTVD 241
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
K K+ + LE ++ ++G +SI H + KG+ I Y+ +L I +
Sbjct: 242 K-----PAKDHDVARLESQLVERLGAKVSITHNKKGKGKLVINYQDLAELDGIIDRI 293
>gi|220921035|ref|YP_002496336.1| parB-like partition protein [Methylobacterium nodulans ORS 2060]
gi|219945641|gb|ACL56033.1| parB-like partition protein [Methylobacterium nodulans ORS 2060]
Length = 297
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 120/298 (40%), Positives = 194/298 (65%), Gaps = 9/298 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + RLGRGLAALIG+V++ + Q + I + PNP NPR +F
Sbjct: 1 MADEVVRPRLGRGLAALIGDVSEDAPPANAD----RKGQRRVPIEFLRPNPRNPRRHFAE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LE+L SI++ G+IQP++VR++ ++I+AGERR+RAA+ A L EVPV+ +D+
Sbjct: 57 AELEELAASIRARGVIQPIVVRSVAKVPDTFEIVAGERRWRAAQRAGLHEVPVVEVEIDD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++SLE AI+ENVQR DLNP+EEA GYE+L+SE+ Y+Q+++ I+GKSRSH+AN LR+L L
Sbjct: 117 RTSLEYAILENVQRADLNPIEEAAGYERLMSEFRYSQSELAEIIGKSRSHLANTLRLLNL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD---NKKEK 235
P +V+E + ++ GHAR L+S +DP ++A+ +V++ ++VR+ E L +
Sbjct: 177 PPAVQEQVIAGALTAGHARALLSVNDPEAVARRVVAEGLTVREVEALAASEQPTEAGPRP 236
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + + EK+ LE+++ +G+ +SI+HR + G+ ++Y + EQL +C L
Sbjct: 237 GRPRSKQAPEKDADTRALERRLEDVLGVTVSIEHRGSGGEVRLRYGSLEQLDGLCRRL 294
>gi|251800240|ref|YP_003014971.1| parB-like partition protein [Paenibacillus sp. JDR-2]
gi|247547866|gb|ACT04885.1| parB-like partition protein [Paenibacillus sp. JDR-2]
Length = 285
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 107/292 (36%), Positives = 176/292 (60%), Gaps = 15/292 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLGRGL ALI ++ S D + I + + PNP+ PR F+ E +++L
Sbjct: 3 KRLGRGLDALIPSLSVSED----------DKVIEIQLTQLRPNPYQPRKTFDDESIKELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SIK HG+IQP+IVR + Y+IIAGERRFRA+++ + VP ++R ++ +EIA++
Sbjct: 53 ESIKQHGVIQPIIVRTV-LKGYEIIAGERRFRASQLCGNATVPAVVRAFSDQQVMEIALI 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLN +E A+ Y+ L+ ++ TQ ++ VGKSRSH+AN LR+L LP+ +++ +
Sbjct: 112 ENLQREDLNAIETAMAYQGLMDKFKLTQEELSMKVGKSRSHIANFLRLLALPAEIKDNVS 171
Query: 188 KEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQD-NKKEKRKKIFEGS 243
+ IS+GHAR LV D +A VS SVRD EE +Q+ + + + K S
Sbjct: 172 RGTISMGHARALVGIKDAAVQKDMANRTVSLGWSVRDLEEAIQKLEVKETAEAAKAKAKS 231
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
++++ Y+ LE+ + + + IK + +KG+ ++Y + L+ + LL
Sbjct: 232 KKRDPYIESLEESLRDRFKTTVKIKQQKDKGKIELQYYNKQDLERLLELLQN 283
>gi|126724522|ref|ZP_01740365.1| ParB-like partition protein [Rhodobacterales bacterium HTCC2150]
gi|126705686|gb|EBA04776.1| ParB-like partition protein [Rhodobacterales bacterium HTCC2150]
Length = 303
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 117/286 (40%), Positives = 176/286 (61%), Gaps = 9/286 (3%)
Query: 1 MSNNYS-KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M++ +R LGRGL+AL+ +V + P + P+++ + + + PNP PR F
Sbjct: 1 MADKKQERRGLGRGLSALMADVKLD-EQPTSEEGRAPKAEHIVPVERLSPNPDQPRRQFV 59
Query: 60 SEGLEDLCQSIKSHGIIQPLI--VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L DL +SI+ GIIQPLI V D Y+I+AGERR+RAA+ A + +VPVIIR D
Sbjct: 60 EEDLADLTESIREKGIIQPLIVRVNPRDENGYEIVAGERRWRAAQRAKVHQVPVIIREFD 119
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ LE+AI+EN+QR DLN +EEA+GY QL+ +G+TQ + + +GKSRSH+AN+LR+L
Sbjct: 120 DTEVLEVAIIENIQRADLNAVEEAMGYRQLMDRFGHTQEKMAAALGKSRSHIANLLRLLN 179
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP V E +R ++++GHAR LV + +P LA+ ++S +SVR+TE L K
Sbjct: 180 LPDDVLEYLRHGDLTMGHARALVPSENPSDLAKRVISGDLSVRETERLA---KGPLVKTG 236
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYE 281
K + K+ LE +++ +G+ +SI H K G+ I Y+
Sbjct: 237 KPAKPKAVKDSDTNALEGDLAANLGMKVSIDHTQGKESGKVTISYK 282
>gi|320527147|ref|ZP_08028334.1| ParB-like partition protein [Solobacterium moorei F0204]
gi|320132475|gb|EFW25018.1| ParB-like partition protein [Solobacterium moorei F0204]
Length = 297
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 110/299 (36%), Positives = 174/299 (58%), Gaps = 12/299 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI--DSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ ++ LGRGL ++ G + D E + I+I I PNP+ PR F
Sbjct: 1 MAE-KKQKGLGRGLDSIFGSNVEQFLDDIQSSAKEVPGRREVEIAIEEIRPNPYQPRKEF 59
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ L +L SI++HGI PL+VR Y +I GERR RAAK+A L VP I
Sbjct: 60 DQTALNELADSIRTHGIFTPLLVRK-SVSGYDLITGERRLRAAKIAGLKVVPAISVEFTE 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +EIAI+ENVQR+DLN +EEA Y+ L+ + GYTQ + VGKSR + ANI+R+LKL
Sbjct: 119 EQMMEIAILENVQREDLNAIEEAAAYDSLVKKLGYTQEKLAERVGKSREYCANIMRLLKL 178
Query: 179 PSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
PS V++++ +++++GH R L + L A+ I+ +KMSVR+ E V++ ++++ K
Sbjct: 179 PSEVQKLVVDKKLAMGHVRPLLGLKDEMEMLDAAEKIMKEKMSVREVEAYVRDINSEEVK 238
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
K + ++++ + DLE +IS K+G ++I+++ + I+Y E L I +L
Sbjct: 239 PNKT-KPEKKRDPIIHDLEHQISVKLGTKVTIQNK----KLTIRYTDTEDLNRILEILN 292
>gi|205371924|ref|ZP_03224744.1| site-specific DNA-binding protein [Bacillus coahuilensis m4-4]
Length = 283
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 91/289 (31%), Positives = 167/289 (57%), Gaps = 16/289 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+GL V + D E+ I ++ I PNP+ PR F+ + +E+L
Sbjct: 3 KGLGKGLDVFFSTVEDTTD----------ETVKLIPLNEIRPNPYQPRKVFDQDAIEELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SI HG++QP+I+R Y+I+ GERR+RA+K A LS +P ++R++ ++ +E+A++
Sbjct: 53 SSILQHGVLQPIILRKT-IKGYEIVVGERRYRASKEAKLSSIPAVVRDLSDQQMMELALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+P+EE Y+QL+ TQ ++ +GKSR H+AN +R+L LP S++++I
Sbjct: 112 ENLQREDLSPIEEGAAYQQLMQRLDVTQEELAKRLGKSRPHIANHVRLLLLPGSIQQLIS 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+S+GH R L ++ + +V ++++VR E+L+Q + ++ + +
Sbjct: 172 DGTLSMGHGRALLGLKKKDKLQAVTKKVVDERLNVRQLEQLIQGLNEN--VSRETTKETP 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ ++ + E + + G + IK KG+ I++ + + L I LL
Sbjct: 230 KKDVFIKERESFLRERFGTTVHIKQSAKKGKIEIEFFSKDDLDRILELL 278
>gi|296533440|ref|ZP_06896023.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Roseomonas
cervicalis ATCC 49957]
gi|296266220|gb|EFH12262.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Roseomonas
cervicalis ATCC 49957]
Length = 287
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 114/290 (39%), Positives = 175/290 (60%), Gaps = 12/290 (4%)
Query: 9 RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQ 68
RLG GL+AL+G+ N + + + +I P P PR + GL +L
Sbjct: 8 RLGMGLSALLGDQNAVTPASPGA-----SIPRSLPVEAIEPGPFQPRGPIDQSGLAELAA 62
Query: 69 SIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SI+ HG++QP++VR G Y+II GERR+RAA++A EVPV + +D++++L A+
Sbjct: 63 SIREHGVLQPILVRPKPGAPGTYQIIGGERRWRAAQLAQKHEVPVYVHELDDRAALAAAL 122
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
VEN+QR+DLN LEEA GY++L E+G TQ+ +G VGKSRSHVAN LR+L LP VR+M+
Sbjct: 123 VENLQREDLNALEEAQGYKRLTEEFGLTQDALGQAVGKSRSHVANTLRLLALPPKVRDML 182
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ +S GHAR L++ DP+ LA++++++ ++VR TE LV + K G
Sbjct: 183 ARGSLSAGHARALLTAPDPVKLAEMVITRGLNVRQTEALVATAEK-----LKPATGPVSP 237
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ LE+ + +++GL ++IKH G+ I Y+ +QL + LL
Sbjct: 238 DADTRALERDLMTRLGLKVAIKHGRKGGRVTIAYKDLDQLDGLVRLLSPG 287
>gi|94967071|ref|YP_589119.1| chromosome segregation DNA-binding protein [Candidatus Koribacter
versatilis Ellin345]
gi|94549121|gb|ABF39045.1| chromosome segregation DNA-binding protein [Candidatus Koribacter
versatilis Ellin345]
Length = 298
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 86/290 (29%), Positives = 154/290 (53%), Gaps = 3/290 (1%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPES--QDCISIHSIVPNPHNPRNYFESEGL 63
++ LGRGL +L+ + P + I I NP+ R ++ L
Sbjct: 7 KRKVLGRGLESLLPASRATAAPAVATAPAPPTGDMVRELPIDHIDRNPYQTRTQWDETAL 66
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
+L SI+ G++QP+ VR + +++I GERR+RA+++A + VP I+R V N+ ++E
Sbjct: 67 NELAASIRVSGVLQPVTVRPHGDR-FQLITGERRWRASQLAGKTTVPAIVRQVSNEQAME 125
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ I+EN+QR+DLNP+E+A YE+L E+ TQ + GK RS VAN +R+LKLP+ V+
Sbjct: 126 MTIIENLQREDLNPMEQARAYERLAREFSLTQEQMAQRTGKDRSSVANFMRLLKLPAEVQ 185
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
M+ ++S GHA+ L+ P ++ ++ + N +K
Sbjct: 186 AMVEGNKLSFGHAKALMPLESPEAIIRLAQRVATLSMSVRQTEGAVVNLLNPPEKKQPEE 245
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
R+ + + ++E+++ +G+ + I R KG+ I+Y++ E + +L
Sbjct: 246 RQVDPNVREVEREMERNLGVRVQIADRKGKGKIVIEYKSLEDFDRVVEVL 295
>gi|330815037|ref|YP_004358742.1| ParB-like partition protein [Burkholderia gladioli BSR3]
gi|327367430|gb|AEA58786.1| ParB-like partition protein [Burkholderia gladioli BSR3]
Length = 295
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 179/299 (59%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G +S I + + +S+ + + PR +
Sbjct: 1 MNAVAKKKGLGRGLEALLGGSADITESV-----KIEGALNTLSLDKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I ++IIAGERRFRAA++A L+EVPV+I+ V +++
Sbjct: 56 GALQELAASIRAQGVMQPILVRPIGAERFEIIAGERRFRAARLAGLAEVPVLIKEVTDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L +
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFSFTHEQAAEAVGRSRSAVSNLLRLLNLAA 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V++++SVR+TE+LV + + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNRRLSVRETEKLVAQTTKEAPALKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + N+ IK R +GQ I + + L+ I L N
Sbjct: 236 KAKDDGGRD--TRRLEEELSDMLASNVKIKLGRRGRGQLTIDFGDLDALEGILLRLRGN 292
>gi|78064755|ref|YP_367524.1| chromosome segregation DNA-binding protein [Burkholderia sp. 383]
gi|77965500|gb|ABB06880.1| chromosome segregation DNA-binding protein [Burkholderia sp. 383]
Length = 305
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 106/299 (35%), Positives = 179/299 (59%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 9 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALGKLQAGKYQPRTRMDE 63
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 64 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLDEVPVLVKDVSDQA 123
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L S
Sbjct: 124 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAS 183
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 184 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTHTTKEVPAVKA 243
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I L N
Sbjct: 244 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVTIDFGNLDALEGILVRLRGN 300
>gi|145221429|ref|YP_001132107.1| parB-like partition protein [Mycobacterium gilvum PYR-GCK]
gi|315446819|ref|YP_004079698.1| chromosome segregation DNA-binding protein [Mycobacterium sp.
Spyr1]
gi|145213915|gb|ABP43319.1| chromosome segregation DNA-binding protein [Mycobacterium gilvum
PYR-GCK]
gi|315265122|gb|ADU01864.1| chromosome segregation DNA-binding protein [Mycobacterium sp.
Spyr1]
Length = 331
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 96/329 (29%), Positives = 163/329 (49%), Gaps = 33/329 (10%)
Query: 1 MSNNYSKR-RLGRGLAALIGE-----------------------VNQSIDSPEKKTETIP 36
M+ KR LGRGLA+LI + + + T
Sbjct: 1 MNKQAGKRSGLGRGLASLIPTGPVESGESATLGPKMGGAAADVLLGGAPAPAQTDTNPAG 60
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA-----IDNGLYKI 91
I+ I PNP PR F+ E L +L SI+ G++QP++VRA ++ Y++
Sbjct: 61 AVYREIAPSQIDPNPRQPRQVFDEEALAELVHSIREFGLMQPIVVRAVPVDGDESPRYQL 120
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
+ GERR+RAA+ A ++ +P I+R + + L A++EN+ R LNPLEEA Y+QL+ E+
Sbjct: 121 VMGERRWRAAQQAGVATIPAIVRETADDNLLRDALLENIHRVQLNPLEEAAAYQQLLEEF 180
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS----TSDPLS 207
T ++ S +G+SR + N++R+L+LP V+ + +S GHAR L+S
Sbjct: 181 EVTHEELASRIGRSRPLITNMIRLLRLPIPVQRRVAAGVLSAGHARALLSLDGGPEVQEE 240
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
LA IV++ +SVR TEE V + + L D+ +++S+ +++
Sbjct: 241 LAARIVAEGLSVRATEEAVTLANRNGTTPPAAPRRKPIQMPGLQDVAEQLSTAFDTRVTV 300
Query: 268 KHRNNKGQFCIKYETNEQLKIICSLLGEN 296
KG+ +++ + + L+ I L+ +
Sbjct: 301 SLGKRKGKIVVEFGSVDDLQRIVELMNAS 329
>gi|304392705|ref|ZP_07374645.1| chromosome-partitioning protein ParB [Ahrensia sp. R2A130]
gi|303295335|gb|EFL89695.1| chromosome-partitioning protein ParB [Ahrensia sp. R2A130]
Length = 307
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 121/300 (40%), Positives = 190/300 (63%), Gaps = 12/300 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP-----EKKTETIPESQDCISIHSIVPNPHNPR 55
M+ K RLGRGLAALIG+++ + + + ++I I NP+NPR
Sbjct: 1 MAQEP-KPRLGRGLAALIGDMDSPASNQAGSVTSEAPAAPVMADTHVAIEKIRANPNNPR 59
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRA---IDNGLYKIIAGERRFRAAKMASLSEVPVI 112
F L+DL +S+K HG++QPL+VR + Y++IAGERR+RA++ A L VP++
Sbjct: 60 RTFSESDLDDLSRSLKEHGLLQPLLVRHTSGDPDHDYELIAGERRWRASQRAGLHSVPIV 119
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
+R+VD++ +LE+AI+ENVQR DLNP+EEA GYEQL+ ++ YTQND+ +GKSRSHVAN
Sbjct: 120 VRDVDDRQALELAIIENVQRADLNPVEEAQGYEQLMDDHSYTQNDLAQTIGKSRSHVANT 179
Query: 173 LRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
LR+LKL + VR ++ + +S GHAR L++ +P +AQ IV +SVR E++V + ++
Sbjct: 180 LRLLKLTAPVRALLVEGALSAGHARALITLDNPEEIAQRIVKDGLSVRQVEQIVADANDS 239
Query: 233 KEKRKKIFEGSREK--EKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+ + + + + LE+ +S +G+N+ + HR + KG+ I Y++ EQL +
Sbjct: 240 QPVSSATPKETNPRYDDANSRALERTLSDALGMNVKLTHRASGKGRLVIDYKSLEQLDEL 299
>gi|326329116|ref|ZP_08195445.1| ParB family protein [Nocardioidaceae bacterium Broad-1]
gi|325953198|gb|EGD45209.1| ParB family protein [Nocardioidaceae bacterium Broad-1]
Length = 346
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 91/339 (26%), Positives = 160/339 (47%), Gaps = 45/339 (13%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD-------------------- 40
MS KR LGRGL +LI + + + ++
Sbjct: 1 MSKQPPKRGLGRGLGSLIPTAPATSGNESTDSASVQPDVRHSDLSAGATSGPVVDPGSTG 60
Query: 41 ---------------------CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + I PN PR F+ E + +L SI G++QP+
Sbjct: 61 SAEGRQIENSDLAPVDGAYFAELPVKQIHPNHVQPRQVFDEEAMAELVHSISEIGLLQPI 120
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR +D Y+++ GERR+RA + A L +P I+R D+ L A++EN+ R LNPLE
Sbjct: 121 VVRKVDTDSYELVMGERRWRATQQAGLDVIPAIVRETDDTDMLRDALLENLHRSQLNPLE 180
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+QL++++ T +++ +G+SR ++N +R+LKL SV+ + +S GHAR L
Sbjct: 181 EAAAYQQLLNDFACTHDELAQRIGRSRPQISNTIRLLKLSPSVQRRVAAGVLSAGHARAL 240
Query: 200 VSTS---DPLSLAQVIVSKKMSVRDTEELVQEQD-NKKEKRKKIFEGSREKEKYLTDLEK 255
++ LAQ +V++ +SVR EE+V D + ++ L ++
Sbjct: 241 LAVDGEAQQDKLAQKVVAEGISVRGLEEIVALGDPDGDAFATPRVRRAKPSAPGLKEISD 300
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
++S + + + +KG+ +++ T + L+ I L+
Sbjct: 301 RLSDRFDTRVKVDLGRSKGKITVEFATLDDLRRIVELMS 339
>gi|331700387|ref|YP_004336626.1| parB-like partition protein [Pseudonocardia dioxanivorans CB1190]
gi|326955076|gb|AEA28773.1| parB-like partition protein [Pseudonocardia dioxanivorans CB1190]
Length = 320
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 164/321 (51%), Gaps = 27/321 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP---------------------EKKTETIPESQ 39
M+ K LGRGLAALI + P ++ +
Sbjct: 1 MAE--RKGGLGRGLAALIPTGPPAPAEPGTPTAANVPTSWSSRPPAPPVDEPMPVAGATY 58
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
+ + +I PNP PR F+ E L +L SI+ G++QP++VR G +++I GERR+R
Sbjct: 59 REVDVDAIEPNPKQPRTAFDDEALAELEHSIREFGLLQPVVVRETGPGRFQLIMGERRWR 118
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
A++ A L +P I+R+ + + L A++EN+ R LNPLEEA YEQL++E+G T +++
Sbjct: 119 ASQRAGLDRIPAIVRSTADDALLRDALLENIHRVQLNPLEEAAAYEQLLAEFGVTHSELA 178
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKK 216
+G+SR V N++R+L+LP +V+ + ++ GHAR L+ LA IV++
Sbjct: 179 DRIGRSRPVVTNMIRLLRLPVAVQRRVAAGVLTAGHARALLGLDDPDRQEELAARIVAEG 238
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQF 276
MSVR TEE V N+ + + L ++++ + + ++ KG+
Sbjct: 239 MSVRATEEAVVLARNETPAPVRKKRKT-IHAPGAERLAERLADRFDTRVRVELGQRKGRI 297
Query: 277 CIKYETNEQLKIICSLLGEND 297
+++ + E L+ I L+ D
Sbjct: 298 VVEFGSVEDLERIADLMNPGD 318
>gi|310817159|ref|YP_003965123.1| chromosome partitioning protein parB [Ketogulonicigenium vulgare
Y25]
gi|308755894|gb|ADO43823.1| chromosome partitioning protein parB [Ketogulonicigenium vulgare
Y25]
Length = 297
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 120/300 (40%), Positives = 181/300 (60%), Gaps = 11/300 (3%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + R LGRGL+AL+ +V + + E + I + PNP PR +F+
Sbjct: 1 MAEKPVRTRALGRGLSALMADV-----AADTNEEKPRRPDMRVPIEHVHPNPDQPRRHFD 55
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L++L SI+ GIIQPLIVRA G Y+I+AGERR+RAA+ A L EVPV+ R+
Sbjct: 56 EEALDELTASIREKGIIQPLIVRADPGRPGQYQIVAGERRWRAAQRARLHEVPVVHRSYS 115
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ LEIAI+EN+QR DLN ++EA GY QL+ +G+TQ + + +GKSRSH+AN++R+L+
Sbjct: 116 DTEVLEIAIIENIQRADLNAIDEAAGYRQLMERFGHTQEQMATALGKSRSHIANLIRLLQ 175
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
LP +V+E + +S GHARTL+ LAQ IV++ +SVR+ E L ++ + K +
Sbjct: 176 LPDTVQEKVVLGALSAGHARTLIGHPKAEELAQHIVTRNLSVREAERLTRDPASPGSKPR 235
Query: 238 KIFEGSRE-KEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLG 294
S + K+ LEK++S+ + ++ISI H G ++Y+ QL + LL
Sbjct: 236 PRATKSEQAKDADTVALEKELSATLKMDISIDHLPGQESGSITLRYKDLAQLDDVLRLLS 295
>gi|91974913|ref|YP_567572.1| parB-like partition proteins [Rhodopseudomonas palustris BisB5]
gi|91681369|gb|ABE37671.1| chromosome segregation DNA-binding protein [Rhodopseudomonas
palustris BisB5]
Length = 296
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 126/298 (42%), Positives = 183/298 (61%), Gaps = 11/298 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + + RLGRGLA+LIG+V E+ P +Q + I I NP NPR F
Sbjct: 1 MADEH-RSRLGRGLASLIGDVGGEAAHVER-----PRAQRKVPIEFIKANPRNPRRTFSD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SI+ HG+IQP++VR + ++IIAGERR+RAA+ A L EVP++ +V +
Sbjct: 55 AELGELSDSIRQHGVIQPIVVRPVKGAQDRFEIIAGERRWRAAQRAGLHEVPIVPVDVSD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+LEIAIVENVQR+DLNPLEEA GY L +E+ +Q+DI IVGKSRSHVAN++R+ +L
Sbjct: 115 ADALEIAIVENVQREDLNPLEEAQGYHALANEFKRSQDDIAKIVGKSRSHVANMMRLTRL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V +I ++S GHAR L+ DP + A+ IV++ ++VR TE L E+ + K +K
Sbjct: 175 PDDVLALIAAGQLSAGHARALIGVPDPSAAAKRIVAEGLNVRQTEALAHEEGVPERKPQK 234
Query: 239 IFEGSREKEKY---LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ K LEK++S +G+ ++I+ R+ G I+Y +QL I L
Sbjct: 235 PRASAAAKPAKDADTLALEKRVSDALGMKVTIEDRDGTGSLQIRYADLDQLDDIIRRL 292
>gi|310830132|ref|YP_003962489.1| parB-like partition protein [Eubacterium limosum KIST612]
gi|308741866|gb|ADO39526.1| parB-like partition protein [Eubacterium limosum KIST612]
Length = 299
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 122/301 (40%), Positives = 176/301 (58%), Gaps = 13/301 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + R LG+GL ALI + + TE + + I+ I PN PR F
Sbjct: 1 MAKS---RGLGKGLKALIPD-ESFMSIDNSDTENAEKLVFFLQINKIRPNADQPRKKFNR 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SIK HGI+QPL+VR +N Y IIAGERR+RAA MA L EVPVI++++ K
Sbjct: 57 EKLEELAASIKEHGILQPLVVRP-ENNGYTIIAGERRWRAATMAGLKEVPVIVKDLPAKD 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++ENVQR+DLN +EEA Y L+ + TQ +IG +GKSR+ + N +R+L LP
Sbjct: 116 VMELALIENVQREDLNAIEEAEAYGALMEHFNLTQGEIGIRIGKSRAAITNTMRLLNLPD 175
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
VR+ + + IS GHAR L+S D + + I+ KK+SVR+TE+ V+ N
Sbjct: 176 KVRQEVLDDHISSGHARALLSLEDQKQMESLCEKIIDKKLSVRETEKKVKLLKN----PP 231
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG-EN 296
K + EK Y+T +E + K + I + +KG+ +++ + E L I LLG EN
Sbjct: 232 KEDKAKPEKNPYITAVEDGLKQKFATKVKISGKKDKGKIELEFYSTEDLNRILDLLGYEN 291
Query: 297 D 297
D
Sbjct: 292 D 292
>gi|90413746|ref|ZP_01221734.1| Putative ParB family protein [Photobacterium profundum 3TCK]
gi|90325215|gb|EAS41712.1| Putative ParB family protein [Photobacterium profundum 3TCK]
Length = 297
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 103/297 (34%), Positives = 179/297 (60%), Gaps = 12/297 (4%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTE----TIPESQDCISIHSIVPNPHNPRNYF 58
N SKR LG+GL AL+ + + + + ++ + + IH + P + PR
Sbjct: 1 MNMSKRGLGKGLDALLATSSVAQAKQQNAEKAQSLSVDGTLRELPIHLLQPGKYQPRKEM 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L +L SI++ GIIQP++VR + + Y+IIAGERR+RA++ A L +P I+++V++
Sbjct: 61 SDEALAELSDSIRAQGIIQPIVVRKLASQQYEIIAGERRWRASRQAGLQSIPCIVKDVND 120
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++ + IA++EN+QR+DLN +EEA E+L SE+ T I VGKSR+ V+N+LR+ +L
Sbjct: 121 RAVIAIALIENIQREDLNSIEEAQALERLQSEFSLTHQQIAEAVGKSRAAVSNLLRLNQL 180
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ V+ M+ ++ +GHAR L+S + A+ +V+K +SVRDTE+LV++ N +R
Sbjct: 181 EAPVKRMLELRQLDMGHARALLSLDADMQLEAAETVVTKMLSVRDTEKLVKKLLNPVIER 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSL 292
K + + +LE +S ++G ++I H +N KG+ I ++ + K + ++
Sbjct: 241 VKPAD-----NLEVKELENSLSERLGTQVAINHQKNGKGKIVISFDEAHKFKQLIAI 292
>gi|325525642|gb|EGD03416.1| chromosome partitioning protein ParB [Burkholderia sp. TJI49]
Length = 297
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 106/299 (35%), Positives = 181/299 (60%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLDEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L S
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAS 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAQTTKEAPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I + L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVMIDFGNLDALEGILARLRGN 292
>gi|294625187|ref|ZP_06703829.1| chromosome partitioning protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600506|gb|EFF44601.1| chromosome partitioning protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 309
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 168/304 (55%), Gaps = 11/304 (3%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQSIDSP----EKKTETIPESQDCISIHSIVPNPHNP 54
M+ KR LGRGL AL+G + + ++ +S + + + P + P
Sbjct: 1 MNKPIPAKKRGLGRGLEALLGPKGAAAAAAPGAASEEALQPGDSLRQLPVAQLQPGKYQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R + L +L +SIK+ G+IQP++ R + G ++I+AGERR+RA+++A LSEVPV++R
Sbjct: 61 RREMDEIKLAELAESIKAQGVIQPIVARELAPGQFEIVAGERRWRASQLAGLSEVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+D+++ + +A++EN+QR+DLNPLEEA ++LI E+ T + VG+SR+ V+N+LR
Sbjct: 121 ELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAGAVGRSRASVSNLLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQD-- 230
+L+LP ++R ++ + +GHAR L++ + LAQ + SVR+ E Q+
Sbjct: 181 LLELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAG 240
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+K + + + LE ++S +G + H KG+ I Y + L +
Sbjct: 241 KVPGALRKGKPAAAAPQADIASLETELSESLGTKVVFNHGRGGKGKLVIHYTDLDTLDGV 300
Query: 290 CSLL 293
L
Sbjct: 301 LERL 304
>gi|325298621|ref|YP_004258538.1| parB-like partition protein [Bacteroides salanitronis DSM 18170]
gi|324318174|gb|ADY36065.1| parB-like partition protein [Bacteroides salanitronis DSM 18170]
Length = 299
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 159/302 (52%), Gaps = 15/302 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL ALI + E+ + S + I + I NP+ PR F+
Sbjct: 1 MAV-QKKFALGRGLDALIS-------TNEEIKTSGSSSINEIELSKISVNPNQPRREFDP 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R + Y+IIAGERR+RAA A L +P IR D+++
Sbjct: 53 IALQELADSIAEIGIIQPITLRQMSEDAYQIIAGERRYRAAIQAGLQTIPAYIRTADDEN 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN LE AL Y+ LI +YG TQ + VGK R+ +AN LR+LKLP+
Sbjct: 113 VMEMALIENIQREDLNSLEIALAYQHLIEQYGLTQERLSDRVGKKRATIANYLRLLKLPA 172
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIV------SKKMSVRDTEELVQEQDNKKE 234
++ ++ +EI +GHAR L++ DP + ++ V + + + ++ +
Sbjct: 173 QIQVALKNKEIDMGHARALLALDDPKTQIRIFNEIISQGYSVRKVEEIVKALSAGESVES 232
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
KKI + + L+ + S G + + KG+ I + L+ I +L
Sbjct: 233 GGKKIVPKGSKLSEEYALLQNHLCSFFGTKVQLSCSNKGKGKISIPFNNEADLERIMEIL 292
Query: 294 GE 295
Sbjct: 293 DS 294
>gi|88802439|ref|ZP_01117966.1| putative ParB-like chromosome partitioning protein [Polaribacter
irgensii 23-P]
gi|88781297|gb|EAR12475.1| putative ParB-like chromosome partitioning protein [Polaribacter
irgensii 23-P]
Length = 294
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 105/298 (35%), Positives = 172/298 (57%), Gaps = 8/298 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL+AL+ + + ++ + + S I++ I NP PR YF
Sbjct: 1 MAKATRKQALGRGLSALLQDAPNINSASDEHADKLVGSIIEIAMDLIDVNPFQPRTYFNE 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK G+IQP+ VR ++ +++++GERR+RA+K+ + +P IR +++
Sbjct: 61 EALQELGSSIKELGVIQPITVRKLEGNKFQLVSGERRYRASKLIGNTTIPAYIRLANDQE 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A+VEN+QRK+L+P+E AL Y++LI E TQ D+ + VGK RS V N LR+LKL
Sbjct: 121 MLEMALVENIQRKNLDPIEVALSYQRLIDEIQLTQEDLSTRVGKKRSTVTNYLRLLKLDP 180
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ +R IS+GH R ++S + I+ +K+SVR TE+ V+ N +
Sbjct: 181 ILQTGMRDGFISMGHGRAMISVESTSDQLAIYEKIIREKLSVRQTEDFVKNLKNGTD--- 237
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
I +E Y+ + +IS+ VG I++ + N KG+ I + + E I +LL
Sbjct: 238 -IKPIKKEIPSYIKNSLTEISTYVGHKIAVTVNTNGKGKISIPFHSEEDFNRIKNLLK 294
>gi|89067428|ref|ZP_01154941.1| chromosome partitioning protein parB [Oceanicola granulosus
HTCC2516]
gi|89046997|gb|EAR53051.1| chromosome partitioning protein parB [Oceanicola granulosus
HTCC2516]
Length = 296
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 114/296 (38%), Positives = 173/296 (58%), Gaps = 9/296 (3%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+ R LGRGL+AL+ +V+ + + + I + PNP+ PR F ++
Sbjct: 4 DRPKTRGLGRGLSALMADVSPEGPAQDAPRRPDAR----LPIERVHPNPNQPRRSFNADA 59
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L SI GIIQPLIVR Y+I+AGERR+RAA+ A L EVP ++R+ D+
Sbjct: 60 LAELASSIAEKGIIQPLIVRPAPGREGHYEIVAGERRWRAAQQAKLHEVPALVRDFDDTE 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+AI+EN+QR DLNP++EA GY QL+ +G+TQ + + +GKSRSH+AN LR+L LP
Sbjct: 120 VLEVAIIENIQRADLNPVDEAAGYRQLMDRFGHTQEQLATALGKSRSHIANQLRLLTLPP 179
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
++ ++ + +S GHARTLV D ++AQ IV + +SVR+ E+LV ++ + K
Sbjct: 180 PIQTLMIEGALSSGHARTLVGHEDAEAMAQKIVREGLSVREAEKLV-KKSREGGSEPKPP 238
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
EK+ +E ++S+ + + +SI HR G I+Y QL + L
Sbjct: 239 TRRSEKDADTRQIEAELSAALRMAVSIDHRPGTEGGTLTIRYNNFGQLDDLLRALS 294
>gi|227509066|ref|ZP_03939115.1| stage 0 DNA-binding protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227511972|ref|ZP_03942021.1| stage 0 DNA-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227524957|ref|ZP_03955006.1| stage 0 DNA-binding protein [Lactobacillus hilgardii ATCC 8290]
gi|227084780|gb|EEI20092.1| stage 0 DNA-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227087869|gb|EEI23181.1| stage 0 DNA-binding protein [Lactobacillus hilgardii ATCC 8290]
gi|227191453|gb|EEI71520.1| stage 0 DNA-binding protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 294
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 161/301 (53%), Gaps = 14/301 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M N LG+G+ AL + +T E+ I + I PNP+ PR+ F+
Sbjct: 1 MVNKKKPTGLGKGIEALFQD---------NTVDTSKENVIDIKVSEIKPNPYQPRHRFDQ 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ LEDL SIK+ G+ QP+IVR D + Y+++ GERR RA+K+A +P I+R+V+
Sbjct: 52 KALEDLALSIKNSGVFQPIIVRQPDPEVESYELLTGERRLRASKIAQQKMIPAIVRDVNE 111
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +EIA++EN+QR+DL LEEA Y L++ TQ + +GKSR ++AN LRIL L
Sbjct: 112 EQMMEIAVLENLQREDLTTLEEAEAYNMLMTRLDLTQAQVAQKLGKSRPYIANYLRILGL 171
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P+ V+EM+ ++S+G ARTL+S ++ L ++ +L Q K
Sbjct: 172 PTEVKEMLEDHKLSMGQARTLLSVNNKQELIKLARKSVTDSMTVRQLEQAAAKINGKTGN 231
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI---KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + K ++ E ++ K G +SI + KG+ I+Y + E L I +L
Sbjct: 232 RKKRVQRKSPFVRASEGQLQEKFGTPVSIVNSSRKKGKGKIEIEYVSTEDLNRILEMLDV 291
Query: 296 N 296
N
Sbjct: 292 N 292
>gi|92115407|ref|YP_575335.1| chromosome segregation DNA-binding protein [Chromohalobacter
salexigens DSM 3043]
gi|91798497|gb|ABE60636.1| chromosome segregation DNA-binding protein [Chromohalobacter
salexigens DSM 3043]
Length = 306
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 87/304 (28%), Positives = 164/304 (53%), Gaps = 15/304 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDS--------------PEKKTETIPESQDCISIHSIVPN 50
KR LGRGL ALIG + D+ + E + + +
Sbjct: 2 TRKRALGRGLDALIGAGARHRDTVGGEGLAGDVVLEPAQAPAGEEQERLMRLPLGQLSRG 61
Query: 51 PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
+ PR + E LE+L SI++ G++QP++VR + Y+IIAGERR+RAA++A L +P
Sbjct: 62 KYQPRRDIQPESLEELADSIRAQGVMQPIVVRPVGESRYEIIAGERRWRAAQLAELDVIP 121
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
++R V ++++L +A++EN+QR++LNP+EEA+ ++L+ ++ TQ + VGKSR+ VA
Sbjct: 122 AVVREVSDEAALALALIENIQRENLNPVEEAMALKRLLDDFELTQQQVADAVGKSRAQVA 181
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
N+LR+L L V+ ++ + ++ +GHAR L++ + + + + +
Sbjct: 182 NLLRLLSLDEEVQTLLERGDLDMGHARALLTLPAARQRSIAREVVERDLTVRQTEALAKR 241
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+ ++K + + + LE +++ +G + I+H + KG+ I+Y + ++L I
Sbjct: 242 DPRDKVADKPKSAARDNADVARLETRLAELLGAPVKIQHGASGKGRVTIRYTSLDELDGI 301
Query: 290 CSLL 293
+
Sbjct: 302 LGHI 305
>gi|312868955|ref|ZP_07729135.1| stage 0 sporulation protein J [Lactobacillus oris PB013-T2-3]
gi|311095519|gb|EFQ53783.1| stage 0 sporulation protein J [Lactobacillus oris PB013-T2-3]
Length = 295
Score = 154 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 104/301 (34%), Positives = 170/301 (56%), Gaps = 17/301 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRG+ AL + + E+ + + I PNP+ PR F+S
Sbjct: 1 MAKR-KKGGLGRGIEALF-------EENTIEEPVNGETVQDVKLSLIRPNPYQPRRTFDS 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L++L SIK G+ QP+I+R D Y++IAGERRFRA+KMA +P I+RN+ +
Sbjct: 53 AALQELADSIKETGVFQPVILRQPDAAVERYELIAGERRFRASKMARQETIPAIVRNMTD 112
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +E+A++EN+QR+DL PLEEA Y+ L+ + TQ + + +GKSR ++AN LR+L L
Sbjct: 113 EQMMEVAVLENLQREDLTPLEEAQAYQTLMDKLSLTQAQVANRLGKSRPYIANYLRLLGL 172
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLS---LAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P ++E + + +S+G ART++ D LA+ + K ++VR EE+V + +
Sbjct: 173 PPLIKEALNEGRLSMGQARTILGLKDKKQLVGLAKRAMDKNLTVRQLEEIVAQMNG--TS 230
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLL 293
+KK + + K YL + E ++ SK G +++ + G+ I Y +N+ L I +L
Sbjct: 231 KKKAQKKGQRKPVYLREAEAQLQSKFGAKVAVSQSRKRGAGKIEIPYTSNDDLTRILEVL 290
Query: 294 G 294
Sbjct: 291 N 291
>gi|169632022|ref|YP_001705671.1| chromosome partitioning protein ParB [Mycobacterium abscessus ATCC
19977]
gi|169243989|emb|CAM65017.1| Probable chromosome partitioning protein ParB [Mycobacterium
abscessus]
Length = 330
Score = 154 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 86/321 (26%), Positives = 157/321 (48%), Gaps = 28/321 (8%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTE-------------------------TIP 36
+++ K LGRGLA+LI S I
Sbjct: 5 ASSRRKGGLGRGLASLIPTAPVDGSSAPAGPSLGAAAADVVIGGGPAPAAPAATPAADIG 64
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
I + +I PNP PR F+ E L +L SI+ G++QP++VR +D+G Y+++ GER
Sbjct: 65 AVYREIPVTAIKPNPKQPRQVFDEEALAELVHSIREFGVMQPIVVRVVDDGDYQLVMGER 124
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA + A L +P I+R + + L A++EN+ R LNPLEEA Y+QL+ E+ T
Sbjct: 125 RWRATQEAGLDTIPAIVRETADDNLLRDALLENIHRAQLNPLEEAAAYQQLLDEFEVTHE 184
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ + +G+SR ++N++R+L+LP +V+ + +S GHAR L++ + + ++
Sbjct: 185 ELAARIGRSRPVISNMIRLLRLPIAVQRRVAAGVLSAGHARALLALEGGAGAQEELAARI 244
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKE---KYLTDLEKKISSKVGLNISIKHRNNK 273
++ + +E + R K L D+ +++S +++ K
Sbjct: 245 VAEGMSVRAAEEAVTLANRSDAPKPAPRRKPMQMPGLQDVAERLSGTFDTRVTVSLGKRK 304
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G+ +++ + + L+ I L+
Sbjct: 305 GKIVVEFGSVDDLQRIVDLMS 325
>gi|258404142|ref|YP_003196884.1| parB-like partition protein [Desulfohalobium retbaense DSM 5692]
gi|257796369|gb|ACV67306.1| parB-like partition protein [Desulfohalobium retbaense DSM 5692]
Length = 314
Score = 154 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 179/304 (58%), Gaps = 13/304 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ R LG+GL AL+ D + + + I PNP PR F
Sbjct: 1 MASMS--RGLGKGLDALLNSSASEPDDALAASAANTTDVQLLDLTQIKPNPQQPRRTFTE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L QSI G++QP++VR + +G Y+I+AGERR+RA+++A L +VP ++R++ +K
Sbjct: 59 ESLEELAQSITEQGVLQPILVRPVADG-YQIVAGERRWRASRLAGLEQVPALVRSLSDKE 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
SL +A++EN+QR+DLNPLEEA E+L E G +Q+++ V KSRS VAN LR+L+L
Sbjct: 118 SLVLALLENLQREDLNPLEEAQALERLQGEMGVSQSELAKHVCKSRSAVANSLRLLQLDE 177
Query: 181 SVREMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR- 236
+R+ + +S G+ARTL+ +D + L ++++ +++VR TE++V +
Sbjct: 178 EIRQAVLDGSLSAGNARTLMGVNDAAARMDLFEIVLMHELTVRQTEKIVSYWKEHGQFPA 237
Query: 237 ------KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
+ + +++++L DL++ + + I ++ KG+ + Y++ EQL+ I
Sbjct: 238 PYGGKSQHRAPAAAQRDRFLQDLQQVLKDHLPAKIQLRGGREKGKISMHYDSPEQLEQIL 297
Query: 291 SLLG 294
S+LG
Sbjct: 298 SMLG 301
>gi|116688120|ref|YP_833743.1| parB-like partition proteins [Burkholderia cenocepacia HI2424]
gi|254246689|ref|ZP_04940010.1| ParB-like partition protein [Burkholderia cenocepacia PC184]
gi|116646209|gb|ABK06850.1| chromosome segregation DNA-binding protein [Burkholderia
cenocepacia HI2424]
gi|124871465|gb|EAY63181.1| ParB-like partition protein [Burkholderia cenocepacia PC184]
Length = 305
Score = 154 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 106/299 (35%), Positives = 180/299 (60%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 9 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALGKLQAGKYQPRTRMDE 63
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 64 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLDEVPVLVKDVSDQA 123
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L S
Sbjct: 124 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAS 183
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 184 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVSHTTKEAPAVKA 243
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I + L N
Sbjct: 244 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVLIDFGNLDALEGILARLRGN 300
>gi|107024501|ref|YP_622828.1| parB-like partition proteins [Burkholderia cenocepacia AU 1054]
gi|170731468|ref|YP_001763415.1| parB-like partition protein [Burkholderia cenocepacia MC0-3]
gi|105894690|gb|ABF77855.1| chromosome segregation DNA-binding protein [Burkholderia
cenocepacia AU 1054]
gi|169814710|gb|ACA89293.1| parB-like partition protein [Burkholderia cenocepacia MC0-3]
Length = 297
Score = 154 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 106/299 (35%), Positives = 180/299 (60%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLDEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L S
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAS 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVSHTTKEAPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I + L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVLIDFGNLDALEGILARLRGN 292
>gi|297563776|ref|YP_003682750.1| parB-like partition protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848224|gb|ADH70244.1| parB-like partition protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 314
Score = 154 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 172/314 (54%), Gaps = 20/314 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGE------------VNQSIDSPEKKTETIPES--QDCISIHS 46
M + +R LG+GL ALI + + E + E +P+ + + + S
Sbjct: 1 MPVSQQRRGLGKGLGALIPQGPAAPAPAPVTVSEEETQPVEPRVEALPDGTYLEEVELSS 60
Query: 47 IVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA---IDNGLYKIIAGERRFRAAKM 103
I+PNP PR YF+ + LE+L SI G++QP++VR D Y++I GERR RA+K
Sbjct: 61 IIPNPRQPRKYFDDQALEELRDSISEVGLLQPIVVRKLEGEDGPRYELIMGERRMRASKE 120
Query: 104 ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVG 163
A L+ VP I+R+ D+ L A++EN+ R++L PLEEA Y+QL+ ++G T ++ +G
Sbjct: 121 AGLTRVPAIVRSTDDDELLRDALLENLHRQELTPLEEAAAYKQLLDDFGATHGELAQRIG 180
Query: 164 KSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVR 220
+SRSH+ N LR+L LP V+ + +S GHARTL+ LA +V + +SVR
Sbjct: 181 RSRSHITNTLRLLTLPPKVQTRVAAGVLSAGHARTLLKVEDPDLQDRLAARVVEEGISVR 240
Query: 221 DTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKY 280
EE+V ++ +E+R + + + ++S ++ + + KG+ +++
Sbjct: 241 SLEEMVALREEPEEERVRRAPTRTANPPQVEEWASRLSDRLDTTVKVNMGKRKGRIVVEF 300
Query: 281 ETNEQLKIICSLLG 294
T+E L+ I S +G
Sbjct: 301 ATHEDLERIISQMG 314
>gi|206558431|ref|YP_002229191.1| chromosome partitioning protein ParB [Burkholderia cenocepacia
J2315]
gi|198034468|emb|CAR50333.1| chromosome partitioning protein ParB [Burkholderia cenocepacia
J2315]
Length = 297
Score = 154 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 106/299 (35%), Positives = 180/299 (60%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLDEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L S
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAS 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKEAPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I + L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVLIDFGNLDALEGILARLRGN 292
>gi|313885476|ref|ZP_07819226.1| stage 0 sporulation protein J [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619206|gb|EFR30645.1| stage 0 sporulation protein J [Eremococcus coleocola
ACS-139-V-Col8]
Length = 297
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 104/301 (34%), Positives = 172/301 (57%), Gaps = 16/301 (5%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M N + R LGRG+ AL T E + I + I PNP+ PR +F
Sbjct: 1 MPKNTKRSRSLGRGMDALFSNFED--------TPGENEVVEEIDLADIRPNPYQPRKHFN 52
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L++L +SIK G+ QP+IVR Y++IAGERR RA+++A +P I+R +D +
Sbjct: 53 EEALQELAESIKQSGVFQPIIVRQSSIKGYELIAGERRVRASRLAGRETIPAIVRQLDEE 112
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+ +EIA+VEN+QR+DL+PLEEA Y + + TQ + +GKSR ++AN LR+L LP
Sbjct: 113 AMIEIAVVENLQREDLSPLEEAEAYSIFMDKLNLTQAQVAERIGKSRPYIANYLRLLSLP 172
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+++M+ ++++S+G ARTL+ D + A+ +++ ++VR EELVQ + KEK
Sbjct: 173 EEIKQMVSQDQLSMGQARTLLGLKDKSKMVALAKKVIAGNLTVRQLEELVQSSNQAKEKS 232
Query: 237 KK----IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
K + ++ K ++ +E+++ G I+ + ++G+ I++ + L I L
Sbjct: 233 AKEAEIKNKKAKVKSAHILAIEEQMQDYFGTQTRIQQKGDRGKIEIEFLSESDLIRILDL 292
Query: 293 L 293
L
Sbjct: 293 L 293
>gi|149370641|ref|ZP_01890330.1| chromosome partitioning protein [unidentified eubacterium SCB49]
gi|149356192|gb|EDM44749.1| chromosome partitioning protein [unidentified eubacterium SCB49]
Length = 299
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 160/299 (53%), Gaps = 2/299 (0%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP-EKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I S +K + + + + + SI NP PR F
Sbjct: 1 MAKATKKQALGRGLSALLKDPTNDIQSANDKNADKVVGNIVELELTSIEMNPFQPRTSFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SIK G+IQP+ VR + Y++++GERRFRA+K+ L +P IR +++
Sbjct: 61 EEALRELASSIKELGVIQPITVRKLSFNKYQLVSGERRFRASKLIGLETIPAYIRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E AL Y++LI E TQ ++ VGK+RS + N LR+LKL
Sbjct: 121 ESLEMALVENIQREDLDPIEIALSYQRLIDEIDLTQEEMSDRVGKNRSTITNYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++ +R IS+GH R L+S + + + + E K+ +
Sbjct: 181 PIIQTGMRDGFISMGHGRALISVENQDAQLDIYEKVLSNNLSVRETEAIVRGLKKNNESA 240
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGEND 297
+ K+ T+ + +S+ +++K N KGQ + + + E + I + +
Sbjct: 241 TTKKKVVPKFATEAQSSLSNYFDSKVNVKVSANGKGQLVVPFTSKEDFQRILKKIQGEN 299
>gi|325278807|ref|YP_004251349.1| parB-like partition protein [Odoribacter splanchnicus DSM 20712]
gi|324310616|gb|ADY31169.1| parB-like partition protein [Odoribacter splanchnicus DSM 20712]
Length = 300
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 110/305 (36%), Positives = 179/305 (58%), Gaps = 17/305 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL ALI + + + E + + +++ I PNP PR F+
Sbjct: 1 MA---KKNVLGRGLGALIADAAEEPVTR----EIVVSAIQELNLADIRPNPFQPRTEFDE 53
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L SIK+ GI+QP+ VRA++ G Y+IIAGERRFRA+K+A LS +P IR ++ S
Sbjct: 54 EALSELAASIKAIGIVQPITVRAVEEGKYEIIAGERRFRASKLAGLSTIPAYIRKTEDDS 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A++EN+QR+DLN +E A+ Y++LI E TQ+ + VGK R+ +AN LR+LKLP+
Sbjct: 114 LLELALIENIQREDLNAIEVAISYQRLIDECNLTQDGLSERVGKKRATIANYLRLLKLPA 173
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKEKRK 237
++ +R ++IS+GHAR ++ DP + + SVR EE+V+E + + +
Sbjct: 174 QIQLAVRDKKISMGHARAILGVEDPDTQLMIFEQILEYDFSVRKVEEIVRELVHPQVEEP 233
Query: 238 KIFEGSREKEK------YLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC 290
+K K +L+K +S + + +K + + KG+ I ++++ +L+ I
Sbjct: 234 AEAPVVEDKPKKSNEIGDYIELQKHLSRRFDTKVELKRNESGKGKIIIGFKSDAELEKII 293
Query: 291 SLLGE 295
LL +
Sbjct: 294 ELLDK 298
>gi|319944934|ref|ZP_08019196.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Lautropia
mirabilis ATCC 51599]
gi|319741504|gb|EFV93929.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Lautropia
mirabilis ATCC 51599]
Length = 318
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 104/311 (33%), Positives = 172/311 (55%), Gaps = 19/311 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP------------ESQDCISIHSIV 48
MS +K LGRGL +L+G +D P E + ++ +
Sbjct: 1 MSK-KAKGGLGRGLDSLLGGDGPMLDETPAPVAPQPVAVSSSPAAPAEEGIREMPLNLLQ 59
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
+ PR + L++L SI HG++QPL++R IDNG Y+IIAGERRFRAA +A L
Sbjct: 60 AGRYQPRTRMDESALQELADSIHEHGLLQPLVIRPIDNGRYEIIAGERRFRAAALAQLET 119
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
VPVII+ V ++++L +A++EN+QR+DLNPLEEA ++LI E+ YT +G+SRS
Sbjct: 120 VPVIIKEVSDENALALALIENIQREDLNPLEEASAIQRLIDEFHYTHEQAAQAIGRSRSA 179
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELV 226
+N+LR+L L +V+ M+ +I +GHAR L+S +A ++V +++SVR+TE LV
Sbjct: 180 TSNLLRLLNLADTVQTMLLAGDIEMGHARALLSLDRAEQILMAHLVVQRRLSVRETERLV 239
Query: 227 QEQDNKKEKRKKIFEGSRE---KEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYET 282
++ + + K + ++ + L ++I+ + + I N +G+ I + +
Sbjct: 240 SQKLEENKGLAKANQKRAADAVTDRDVARLRERIADHLNTTVEIISKANGRGKLVIHFSS 299
Query: 283 NEQLKIICSLL 293
N+ + L
Sbjct: 300 NDAFSGLLERL 310
>gi|42519768|ref|NP_965698.1| chromosome partitioning protein ParB [Lactobacillus johnsonii NCC
533]
gi|227889293|ref|ZP_04007098.1| stage 0 sporulation protein J [Lactobacillus johnsonii ATCC 33200]
gi|41584058|gb|AAS09664.1| chromosome partitioning protein ParB [Lactobacillus johnsonii NCC
533]
gi|227850095|gb|EEJ60181.1| stage 0 sporulation protein J [Lactobacillus johnsonii ATCC 33200]
gi|329668019|gb|AEB93967.1| chromosome partitioning protein ParB [Lactobacillus johnsonii DPC
6026]
Length = 293
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 107/296 (36%), Positives = 166/296 (56%), Gaps = 11/296 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S KR LGRGL AL E Q ++ E IS+ I PNP+ PR F+++
Sbjct: 5 SKEPKKRGLGRGLEALFDESPQVQETEE---------ITEISLDEIRPNPYQPRKTFDNK 55
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L +SIK +G+ QP+I+R Y+IIAGERRFRA+K+A +P IIR+ D
Sbjct: 56 SLKELSESIKENGVFQPIIIRK-SVNGYEIIAGERRFRASKLAKKKTIPAIIRDFDEAQM 114
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A++EN+QR+DL PLEEA YE L G TQ ++ +GKSR ++AN LR+L LP
Sbjct: 115 MEVAVLENLQREDLTPLEEAQAYEMLQKNLGLTQAEVSKRLGKSRPYIANYLRLLTLPQK 174
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ ++++ E+S+G ARTL+ D S+ + + +L EK KK +
Sbjct: 175 TKRLLQRGELSMGQARTLLGLKDKDSIDDLARKVVKNGITVRQLESLVAKLNEKEKKPKK 234
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ +K ++ E +++ K G +++I + G I + + ++L I LLG N
Sbjct: 235 KAIKKSAFIRASESQLTDKFGTSVNITEGKKGNGHLAIDFASTDELNRILDLLGIN 290
>gi|167587938|ref|ZP_02380326.1| ParB-like partition protein [Burkholderia ubonensis Bu]
Length = 297
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 180/299 (60%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALAKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L +
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFHFTHEQAAESVGRSRSAVSNLLRLLNLAA 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTQTTKEVPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I + L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVTIDFGNLDALEGILARLRGN 292
>gi|103488334|ref|YP_617895.1| parB-like partition proteins [Sphingopyxis alaskensis RB2256]
gi|98978411|gb|ABF54562.1| chromosome segregation DNA-binding protein [Sphingopyxis alaskensis
RB2256]
Length = 319
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 108/315 (34%), Positives = 182/315 (57%), Gaps = 21/315 (6%)
Query: 1 MSNNY--------SKR--RLGRGLAALIGEVNQSID------SPEKKTETIPESQDCISI 44
MS+ KR LGRGL AL G+V + ++ I++
Sbjct: 1 MSDKKEENAVTPPRKRPSGLGRGLNALFGDVAVEAPVLATPGGAARAAPVAGDAVQHIAV 60
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA-IDNGLYKIIAGERRFRAAKM 103
+I P P PR +F+ + +L SI S G++QP+IVR D ++++AGERR+RAA+
Sbjct: 61 GAIRPLPGQPRRHFDEAAIAELADSIGSRGLLQPIIVRRSPDGEGFQLVAGERRWRAAQR 120
Query: 104 ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVG 163
A L ++P ++R +D+ ++ EIA+VEN+QR+DLN +EEA Y +LI ++G+ Q + +VG
Sbjct: 121 AGLHQIPALVRELDDAATYEIALVENIQRQDLNAIEEASAYRRLIEDFGHNQEALAKLVG 180
Query: 164 KSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTE 223
KSRSHVAN++R+L LP +V+ ++ +++GHAR L+ DP ++A+ +V +SVR E
Sbjct: 181 KSRSHVANLMRLLDLPQAVQALVGDGSLAMGHARALIGADDPEAIARRVVRDGLSVRAVE 240
Query: 224 ELVQEQD---NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIK 279
LV+ K K +G ++ + +E+ +S +G+ ++I++ KG +K
Sbjct: 241 ALVRAGKEGGRKAPLEYKSIDGVGGRDPDIVAVERHLSELLGIAVAIQYAGGGKGALTLK 300
Query: 280 YETNEQLKIICSLLG 294
+ + +QL +IC L
Sbjct: 301 FASLDQLDMICQRLS 315
>gi|291526559|emb|CBK92146.1| Predicted transcriptional regulators [Eubacterium rectale DSM
17629]
Length = 296
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 114/294 (38%), Positives = 180/294 (61%), Gaps = 8/294 (2%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
+K+ LG+GL +LI + + P K I I+ + PN PR F+ + L +
Sbjct: 3 AKKGLGKGLDSLITD---KVSKPVKPKSNHAADAVMIDINKVEPNREQPRKKFDEDALIE 59
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK GI+QPL+ + D Y+I+AGERR+RAAK+A L EVPVII+ + N+ +EI+
Sbjct: 60 LSESIKQFGILQPLLCQERD-DYYEIVAGERRWRAAKLAGLKEVPVIIKKLTNQQIMEIS 118
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEAL Y++L+ E+ Q+D+ V KSR+ V N +R+LKL V++M
Sbjct: 119 LIENIQREDLNPIEEALAYKRLLEEFKLKQDDVAERVSKSRTAVTNSMRLLKLNEKVQQM 178
Query: 186 IRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ E ++ GHAR L+ + +AQ I +K+SVRDTE+LV+ K+K K
Sbjct: 179 VIDEMLTTGHARALLGIEDQNQQYVVAQQIFDQKLSVRDTEKLVKSLQKNKKKTKSEKPV 238
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLGE 295
+ + E DLE+K+ +G + I +N N G+ I+Y ++++L I ++L
Sbjct: 239 NPQMEAIYRDLEEKLKKNMGTKVLINRKNENSGKIEIEYYSHDELDRIVNMLNS 292
>gi|254418136|ref|ZP_05031860.1| ParB-like nuclease domain family [Brevundimonas sp. BAL3]
gi|196184313|gb|EDX79289.1| ParB-like nuclease domain family [Brevundimonas sp. BAL3]
Length = 278
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 102/275 (37%), Positives = 165/275 (60%), Gaps = 2/275 (0%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ +++++P T+P + I S+ PNP PR F E LE+L SI+ G++QP++
Sbjct: 1 MGEAVEAPTAAGATLPSGVQRVPIESLKPNPDQPRKIFTQEHLEELTASIRDKGVLQPIL 60
Query: 81 VRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
VR+ ++IIAGERR+RA++ A L+EVP+++ +D+ E+AI+ENVQR DLNPL
Sbjct: 61 VRSQPGEDGVWQIIAGERRWRASQAARLTEVPIVVHEMDDVEVFEVAIIENVQRADLNPL 120
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y L+ +G TQ+ + IVGKSRSH+AN LR+L+LP V +R +++ GHAR
Sbjct: 121 EEADAYRVLMERFGRTQDQVAGIVGKSRSHIANTLRLLQLPEEVLWYVRNGKLTAGHARA 180
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
L++ +LA+ ++ ++VR E L + + K E + L++ ++
Sbjct: 181 LITAPHAAALAEQAYNEGLNVRQVEALARRAAEGPKPVKPKPAEGGEGAADVAALQQDLA 240
Query: 259 SKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+GLN+ + R+ KG+ I+Y + EQL +C L
Sbjct: 241 DALGLNVQLNDRSGKGELTIRYGSLEQLDDLCRRL 275
>gi|1780762|emb|CAA71461.1| unnamed protein product [Coxiella burnetii]
Length = 289
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 167/296 (56%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS KR LGRGL+ L G + + ++I I P + PR +
Sbjct: 1 MSM-TQKRGLGRGLSDL-GLNELLTEINDASLADSKTELKKLTIDVIQPGRYQPRRQMDK 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI++ GIIQP++VR + Y+IIAGERR+RAA++A L EVP +IR + +++
Sbjct: 59 DALEELANSIRAQGIIQPIVVRPVGQR-YEIIAGERRWRAAQLAGLKEVPAVIRPITDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ ++++EN+QR++LN +EEA ++L+ E+ T +I VGKSR+ V N LR+LKL
Sbjct: 118 AITMSLIENIQRQNLNAIEEAAALQRLLDEFKMTHEEIAEAVGKSRTSVTNSLRLLKLNP 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ + + +GHAR L + A +I+ + +SVR+TE+L+ + K
Sbjct: 178 DVKALLEQGHLDMGHARALLALEGFQQSEAANIIIKRALSVRETEKLI----QHWQSEGK 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + L+ +S K+G ++I+H KG+ I Y + ++L+ I +
Sbjct: 234 SSANRPSMDPDVARLQHHLSDKLGAAVTIRHGAKGKGKLIIHYNSADELEGILDRI 289
>gi|291529201|emb|CBK94787.1| ParB-like partition proteins [Eubacterium rectale M104/1]
Length = 296
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 113/294 (38%), Positives = 180/294 (61%), Gaps = 8/294 (2%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
+K+ LG+GL +LI + + P K I I+ + PN PR F+ + L +
Sbjct: 3 AKKGLGKGLDSLITD---KVSKPVKPKSNHAADAVMIDINKVEPNREQPRKKFDEDALIE 59
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK GI+QPL+ + D Y+I+AGERR+RAAK+A L EVPVII+ + N+ +EI+
Sbjct: 60 LSESIKQFGILQPLLCQERD-DYYEIVAGERRWRAAKLAGLKEVPVIIKKLTNQQIMEIS 118
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR++LNP+EEAL Y++L+ E+ Q+D+ V KSR+ V N +R+LKL V++M
Sbjct: 119 LIENIQRENLNPIEEALAYKRLLEEFKLKQDDVAERVSKSRTAVTNSMRLLKLNEKVQQM 178
Query: 186 IRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ E ++ GHAR L+ + +AQ I +K+SVRDTE+LV+ K+K K
Sbjct: 179 VIDEMLTTGHARALLGIEDQNQQYVVAQQIFDQKLSVRDTEKLVKSLQKNKKKAKSEKPV 238
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLGE 295
+ + E DLE+K+ +G + I +N N G+ I+Y ++++L I ++L
Sbjct: 239 NPQMEAIYKDLEEKLKKNMGTKVLINRKNENSGKIEIEYYSHDELDRIVNMLNS 292
>gi|212211704|ref|YP_002302640.1| chromosome partitioning protein [Coxiella burnetii CbuG_Q212]
gi|212010114|gb|ACJ17495.1| chromosome partitioning protein [Coxiella burnetii CbuG_Q212]
Length = 290
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/296 (33%), Positives = 167/296 (56%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS KR LGRGL+ L G + + ++I I P + PR +
Sbjct: 1 MSM-TQKRGLGRGLSDL-GLNELLTEINDASLADSKTELKKLTIDVIQPGRYQPRRQMDK 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI++ GIIQP+IVR + Y+IIAGERR+RAA++A L EVP +IR + +++
Sbjct: 59 DALEELANSIRAQGIIQPIIVRPVGQR-YEIIAGERRWRAAQLAGLKEVPAVIRPITDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ ++++EN+QR++LN +EEA ++L+ E+ T +I VGKSR+ V N LR+LKL
Sbjct: 118 AIAMSLIENIQRQNLNAIEEAAALQRLLDEFKMTHEEIAEAVGKSRTSVTNSLRLLKLNP 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ + + +GHAR L + A +I+ + +SVR+TE+L+ + K
Sbjct: 178 DVKALLEQGHLDMGHARALLALEGFQQSEAANIIIKRALSVRETEKLI----QHWQSEGK 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + L+ +S K+G ++I+H KG+ I Y + ++L+ I +
Sbjct: 234 SSANRPSMDPDVARLQHHLSDKLGAAVTIRHGAKGKGKLIIHYNSADELEGILDRI 289
>gi|283768653|ref|ZP_06341565.1| ParB-like partition protein [Bulleidia extructa W1219]
gi|283105045|gb|EFC06417.1| ParB-like partition protein [Bulleidia extructa W1219]
Length = 294
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 109/292 (37%), Positives = 180/292 (61%), Gaps = 8/292 (2%)
Query: 4 NYSKRRLGRGLAALIG-EVNQSIDSPEKKTET-IPESQDCISIHSIVPNPHNPRNYFESE 61
+ + LGRGL +L G +V++ ++ E ++ + QD I + I PNP+ PR F+ +
Sbjct: 3 DKKRNGLGRGLDSLFGTDVSELMNQIENGSQNFVSTRQDEIPVDKIQPNPYQPRKEFDPK 62
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LEDL QSI+ HGI PL+V Y+++AGERR RAAKMA L +VPVII + ++
Sbjct: 63 ALEDLAQSIQEHGIFTPLLVIKR-RTDYQLVAGERRLRAAKMAHLEKVPVIIVDFSDEQM 121
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+EI+++EN+QR+DL+PLEEALG++ L+++ YTQ + VGKSR++ AN+LR+LKLP+
Sbjct: 122 MEISLLENIQREDLSPLEEALGFQTLMNQLHYTQEKLAERVGKSRAYCANLLRLLKLPAE 181
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
V+ +++ + +++GH R L++ D + + + + +++ K+EK KK
Sbjct: 182 VQSLLKNQSLTVGHVRPLLALQDENEM-IQLAHAMVREGLSVREAEKRCTKREKDKKPIH 240
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K+ L D++ ++S K+G + + + + I YE NE L I SLL
Sbjct: 241 VKVKKDPQLMDIQNQMSRKLGTKVELSPK----KISISYEDNEDLNRILSLL 288
>gi|150019902|ref|YP_001312156.1| parB-like partition protein [Clostridium beijerinckii NCIMB 8052]
gi|149906367|gb|ABR37200.1| parB-like partition protein [Clostridium beijerinckii NCIMB 8052]
Length = 286
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 104/292 (35%), Positives = 173/292 (59%), Gaps = 12/292 (4%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E + + I I+ I + PR F+SE + +
Sbjct: 3 KKFALGKGLGALIPEESDNTAQENNSL--------LIPINKIKSDEDQPRKLFDSEKIAE 54
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK+HG+IQPLI+R + + Y I+AGERR+RAAKM L EVP II + ++ LEI+
Sbjct: 55 LAESIKTHGVIQPLILRELKDDRYIIVAGERRWRAAKMVGLKEVPAIIMELSDRDILEIS 114
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEAL Y +L++++ TQ ++ +GKSR +AN +R++ L V++
Sbjct: 115 LIENIQRQDLNPIEEALAYRKLLNDFKITQEELSKRIGKSRVAIANTMRLMNLDERVQQY 174
Query: 186 IRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
I + I+ GH R L+ +AQ ++ +K+SVR+ E L++ N +++K E
Sbjct: 175 IIESIITEGHGRVLLSINDKQKQYEIAQQVIDEKLSVRELERLIKRI-NDDIEKEKNNEN 233
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E Y +++ ++ + G ++I ++ NKG+ I+Y + E L+ I ++
Sbjct: 234 IGEVNPYYKEIKNQLQNYFGTKVNILNKKNKGKIEIEYYSEEDLQRILDIIN 285
>gi|307547042|ref|YP_003899521.1| chromosome partitioning protein ParB [Halomonas elongata DSM 2581]
gi|307219066|emb|CBV44336.1| K03497 chromosome partitioning protein, ParB family [Halomonas
elongata DSM 2581]
Length = 308
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 97/308 (31%), Positives = 169/308 (54%), Gaps = 24/308 (7%)
Query: 6 SKRRLGRGLAALIG--------------EVNQSIDSPEKKTETIPES---QDCISIHSIV 48
+R LGRGL ALIG + + ++ + +P S + + + +
Sbjct: 4 KQRALGRGLDALIGANARRRDSLDLPEVDTSLEGAEQDEASRVLPGSEERLERLPLGQLT 63
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
+ PR + E LE+L SI++ G++QP++VR I Y+I+AGERR+RAA++A L
Sbjct: 64 RGRYQPRRDIQPEALEELADSIRAQGVMQPIVVRPIGEERYEIVAGERRWRAAQLAELDV 123
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
+P ++R V ++ +L +A++EN+QR+ LNP+EEA+ ++L+ E+ TQ VG+SR+
Sbjct: 124 IPAVVREVSDEVALALALIENIQRESLNPVEEAMAMKRLLDEFELTQQQAADAVGRSRAQ 183
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELV 226
VAN+LR+L L V+ ++ + ++ +GHAR L +S + A +V+K ++VR TE LV
Sbjct: 184 VANLLRLLALDPEVQTLLERGDLDMGHARALLALSGAKQRKAAHEVVNKDLTVRATEALV 243
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQ 285
++ E + LE ++ +G + I+H KG+ I+Y + E+
Sbjct: 244 KQLTAGGG----KKAAKSEPSPDVARLESRLGELLGAPVKIQHGQSGKGRVTIRYASLEE 299
Query: 286 LKIICSLL 293
L I +
Sbjct: 300 LDGILEHI 307
>gi|215919291|ref|NP_820904.2| chromosome partitioning protein [Coxiella burnetii RSA 493]
gi|218511747|sp|Q83AH2|PARB_COXBU RecName: Full=Probable chromosome-partitioning protein parB
gi|206584176|gb|AAO91418.2| chromosome partitioning protein [Coxiella burnetii RSA 493]
Length = 290
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 167/296 (56%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS KR LGRGL+ L G + + ++I I P + PR +
Sbjct: 1 MSM-TQKRGLGRGLSDL-GLNELLTEINDASLADSKTELKKLTIDVIQPGRYQPRRQMDK 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI++ GIIQP++VR + Y+IIAGERR+RAA++A L EVP +IR + +++
Sbjct: 59 DALEELANSIRAQGIIQPIVVRPVGQR-YEIIAGERRWRAAQLAGLKEVPAVIRPITDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ ++++EN+QR++LN +EEA ++L+ E+ T +I VGKSR+ V N LR+LKL
Sbjct: 118 AITMSLIENIQRQNLNAIEEAAALQRLLDEFKMTHEEIAEAVGKSRTSVTNSLRLLKLNP 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ + + +GHAR L + A +I+ + +SVR+TE+L+ + K
Sbjct: 178 DVKALLEQGHLDMGHARALLALEGFQQSEAANIIIKRALSVRETEKLI----QHWQSEGK 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + L+ +S K+G ++I+H KG+ I Y + ++L+ I +
Sbjct: 234 SSANRPSMDPDVARLQHHLSDKLGAAVTIRHGAKGKGKLIIHYNSADELEGILDRI 289
>gi|167748070|ref|ZP_02420197.1| hypothetical protein ANACAC_02814 [Anaerostipes caccae DSM 14662]
gi|167652062|gb|EDR96191.1| hypothetical protein ANACAC_02814 [Anaerostipes caccae DSM 14662]
Length = 297
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 113/294 (38%), Positives = 177/294 (60%), Gaps = 8/294 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCI--SIHSIVPNPHNPRNYFESEG 62
K LGRGL LI EK + + + I I + PNP+ PR F+ +
Sbjct: 4 KKKTGLGRGLNTLIPSAPVKDTESEKILKKEEQIKSEIVVPILKVEPNPNQPRRQFDEDS 63
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L++L S+K +GI+QPLIV+ D Y+IIAGERR+RAAK+A L EVPV+IR+ +
Sbjct: 64 LQELADSVKQYGILQPLIVKKHD-KFYEIIAGERRWRAAKLAGLKEVPVLIRDYAENEIV 122
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
EIA++EN+QR+DLNP+EEAL Y++L+ E+ Q+ + + V KSR+ + N LR+LKL V
Sbjct: 123 EIALIENIQREDLNPIEEALAYKRLMEEFSLKQDQVAAKVSKSRAAITNSLRLLKLDQRV 182
Query: 183 REMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ ++ +E I+ GHAR L+ A + +K+SVR+ E+LV++ KK++ K
Sbjct: 183 QNLLSEEMITTGHARALLAIEDPDQQYETAMKVFDEKLSVREIEKLVKQMSKKKKETPKE 242
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+E ++E+ + +G ++IK+RNNKG+ I+Y + E+L + +L
Sbjct: 243 ENKVQE--FLFANIEESLKQALGSKVNIKNRNNKGKIEIEYYSKEELDRLVDML 294
>gi|134294228|ref|YP_001117963.1| chromosome segregation DNA-binding protein [Burkholderia
vietnamiensis G4]
gi|134137385|gb|ABO53128.1| chromosome segregation DNA-binding protein [Burkholderia
vietnamiensis G4]
Length = 297
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 178/299 (59%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR + + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GNLQELAASIRAQGVMQPILVRPVSSDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L S
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAS 175
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L++ + A +V+K+MSVR+TE+LV + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQIALAHQVVNKRMSVRETEKLVAHTTKEAPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I + L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVLIDFGNLDALEGILARLRGN 292
>gi|317401631|gb|EFV82257.1| chromosome partitioning protein ParB [Achromobacter xylosoxidans
C54]
Length = 305
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 106/297 (35%), Positives = 173/297 (58%), Gaps = 6/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL AL+G +ID+ K + + + + PR +
Sbjct: 1 MATKKPK-GLGRGLDALLGADAPAIDNIGKAPAKPEGLPSTLPVSKMRAGKYQPRTRMDE 59
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L +SI++ GI+QP++VRA+ G Y+IIAGERRFRAA++A L EVPV++R V +
Sbjct: 60 GALGELAESIRTQGIMQPILVRALGDAPGHYEIIAGERRFRAAQLAGLKEVPVLVREVAD 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+++ +A++EN+QR+DLNPLEEA G +L+ E+G T +G+SRS +N+LR+L L
Sbjct: 120 ENAAVMALIENIQREDLNPLEEAHGVRRLLDEFGLTHEQAAQAIGRSRSATSNLLRLLNL 179
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
S+V+ M+ ++ +GHAR L V + + LA I+++++SVR+ E+LV + + E
Sbjct: 180 ASAVQTMLLAGDVDMGHARALLAVDAATQIQLANQIIARRLSVREAEKLVAKTAKEAESA 239
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+ + + LT LE+ +S +G +++K KGQ I + E L +
Sbjct: 240 ASPKKKANGVSRDLTRLEEALSDHLGTRVALKVGAKEKGQIVIDFHGWEHLNSLLER 296
>gi|209363708|ref|YP_001423620.2| chromosome partitioning protein [Coxiella burnetii Dugway
5J108-111]
gi|207081641|gb|ABS76555.2| chromosome partitioning protein [Coxiella burnetii Dugway
5J108-111]
Length = 290
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 167/296 (56%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS KR LGRGL+ L G + + ++I I P + PR +
Sbjct: 1 MSM-TQKRGLGRGLSDL-GLNELLTEINDASLADSKTELKKLTIDVIQPGRYQPRRQMDK 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI++ GIIQP++VR + Y+IIAGERR+RAA++A L EVP +IR + +++
Sbjct: 59 DALEELANSIRAQGIIQPIVVRPVGQR-YEIIAGERRWRAAQLAGLKEVPAVIRPITDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ ++++EN+QR++LN +EEA ++L+ E+ T +I VGKSR+ V N LR+LKL
Sbjct: 118 AIAMSLIENIQRQNLNAIEEAAALQRLLDEFKMTHEEIAEAVGKSRTSVTNSLRLLKLNP 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ + + +GHAR L + A +I+ + +SVR+TE+L+ + K
Sbjct: 178 DVKALLEQGHLDMGHARALLALEGFQQSEAANIIIKRALSVRETEKLI----QHWQSEGK 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + L+ +S K+G ++I+H KG+ I Y + ++L+ I +
Sbjct: 234 SSANRPSMDPDVARLQHHLSDKLGAAVTIRHGAKGKGKLIIHYNSADELEGILDRI 289
>gi|149182302|ref|ZP_01860781.1| stage 0 sporulation protein J (antagonist of Soj) [Bacillus sp.
SG-1]
gi|148849994|gb|EDL64165.1| stage 0 sporulation protein J (antagonist of Soj) [Bacillus sp.
SG-1]
Length = 283
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/292 (33%), Positives = 165/292 (56%), Gaps = 11/292 (3%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL V+ + + ES IS+ + PNP+ PR FE E +E+L
Sbjct: 3 KGLGKGINALFTNVDAAKE----------ESVQEISLRELRPNPYQPRKVFEPEAIEELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SIK HGI+QP+I R Y+I+ GERRFRAAK A L +VPV++R + +K +E+A++
Sbjct: 53 ESIKEHGILQPIIARK-SIKGYEIVVGERRFRAAKAAKLDKVPVVVRELTDKQMMELAVL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+P+EE Y+ LI + TQ + +GKSR H+AN +R+L LP ++++I
Sbjct: 112 ENLQREDLSPIEEGNAYQLLIDKLDLTQEQLAKRLGKSRPHIANHIRLLSLPPQIQQLII 171
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
++I++GH R L+ L V+ + +L + E + + +K+
Sbjct: 172 DDKITMGHGRALLGLRKKEKLQAVVEKIIKESLNVRQLEKLIHELNENVSRETKKPEKKD 231
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
++ + E + + G N+SIK KG+ ++ + + L I LL + + +
Sbjct: 232 VFIKEQETLLRERFGTNVSIKQSKKKGKIEFEFFSQDDLNRILELLSDLEDK 283
>gi|301301117|ref|ZP_07207274.1| ParB-like protein [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851246|gb|EFK78973.1| ParB-like protein [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 291
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 164/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + LGRG+ AL K+ + E + I I PNP+ PR F
Sbjct: 1 MASRS--KGLGRGIDALF--------QESKEEQQPDEQVVELEISEIRPNPYQPRKTFNE 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L +SIK G+ QP+IVR Y+IIAGERR+RA+K+A +E+P IIR + +
Sbjct: 51 EALEELAKSIKKSGVFQPIIVRKSSVKGYEIIAGERRYRASKLAKKTEIPAIIREFNEEQ 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DL PLEEA Y L+ + TQ + +GKSR ++AN LR+L LP
Sbjct: 111 MMEVAVLENLQREDLTPLEEAEAYNTLMEKLNLTQTQVSERLGKSRPYIANYLRLLGLPG 170
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M++ +S+G ART + + LA+ V + ++VR E+LV + + KK K+
Sbjct: 171 KVKLMLQDGSLSMGQARTLLAVKDKEKLMELAEKTVKEGLTVRQLEQLVAQINGKKPKKA 230
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK--HRNNKGQFCIKYETNEQLKIICSLLG 294
K E Y+ E + K +++K ++ KG+ I Y + + I +L
Sbjct: 231 KKQTNP--YEPYIKQTENLLQEKFRTKVAVKANAKSGKGKIEIDYLSIDDFNRIMDILK 287
>gi|114769777|ref|ZP_01447387.1| ParB-like partition protein [alpha proteobacterium HTCC2255]
gi|114549482|gb|EAU52364.1| ParB-like partition protein [alpha proteobacterium HTCC2255]
Length = 294
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 120/295 (40%), Positives = 180/295 (61%), Gaps = 10/295 (3%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
++ LGRGL+AL+ +++ D+ S + + I ++ NP+ PR F E
Sbjct: 1 MKKDRKGLGRGLSALMADIDH--DTKIISNTVSNTSSNMLPIEKVIANPNQPRQDFNKED 58
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LEDL +SI S GIIQP+IVR Y+I+AGERR+RAA+ A L EVPV++R+ ++
Sbjct: 59 LEDLTRSIASRGIIQPIIVRVSKENNDLYQIVAGERRWRAAQKAQLHEVPVVVRDFTDEE 118
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+AI+ENVQR +LNP+EEAL Y+ LI + YTQ + + +GKSRSHVAN+LR+L LP
Sbjct: 119 LLEVAIIENVQRSNLNPVEEALAYKALIDNFNYTQEQVATGLGKSRSHVANLLRLLNLPE 178
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V + +R +S GHARTLV L+LA +++ + MSVR E V+++ ++K KKI
Sbjct: 179 KVLKYVRVGSLSSGHARTLVGHKQALALANIMIEENMSVRKAEIYVKQRLDRKNLNKKIN 238
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHR--NNKGQFCIKYETNEQLKIICSLL 293
K+ LE + + + + +SI H+ G+ I Y ++L +CS+L
Sbjct: 239 R----KDADTRALEADLFTNIKMKVSIDHKEIKGSGKLIISYNDLDELDKLCSML 289
>gi|317472403|ref|ZP_07931728.1| ParB partition protein [Anaerostipes sp. 3_2_56FAA]
gi|316900123|gb|EFV22112.1| ParB partition protein [Anaerostipes sp. 3_2_56FAA]
Length = 297
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 115/294 (39%), Positives = 179/294 (60%), Gaps = 8/294 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEK--KTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
K LGRGL LI EK K E +S+ + I + PNP+ PR F+ +
Sbjct: 4 KKKTGLGRGLNTLIPSAPVKDTESEKILKKEEQIKSEIMVPILKVEPNPNQPRRQFDDDS 63
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L++L S+K +GI+QPLIV+ D Y+IIAGERR+RAAK+A L EVPV+IR+ +
Sbjct: 64 LQELADSVKQYGILQPLIVKKHD-KFYEIIAGERRWRAAKLAGLKEVPVLIRDYAENEIV 122
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
EIA++EN+QR+DLNP+EEAL Y++L+ E+ Q+ + + V KSR+ + N LR+LKL V
Sbjct: 123 EIALIENIQREDLNPIEEALAYKRLMEEFSLKQDQVAAKVSKSRAAITNSLRLLKLDQRV 182
Query: 183 REMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ ++ +E I+ GHAR L+ A + +K+SVR+ E+LV++ KK++ K
Sbjct: 183 QNLLSEEMITTGHARALLAIEDPDQQYETAMKVFDEKLSVREIEKLVKQMSKKKKETPKE 242
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+E ++E+ + +G ++IK+RNNKG+ I+Y + E+L + +L
Sbjct: 243 ENKVQE--FLFANIEESLKQALGSKVNIKNRNNKGKIEIEYYSKEELDRLVDML 294
>gi|89100941|ref|ZP_01173788.1| Spo0J [Bacillus sp. NRRL B-14911]
gi|89084350|gb|EAR63504.1| Spo0J [Bacillus sp. NRRL B-14911]
Length = 285
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 98/293 (33%), Positives = 161/293 (54%), Gaps = 18/293 (6%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+GL A + E+ I + I PNP+ PR F+ +E+L
Sbjct: 3 KGLGKGLNAFFSNAEADSE----------ETIQEIRLSEIRPNPYQPRKIFDEAAIEELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI+ HGI+QP+I+R ++I+AGERR RAA+ A L +VP +IR + K +E+AI+
Sbjct: 53 QSIREHGILQPVILRK-SIKGFEIVAGERRCRAAREAGLEKVPSVIRELTEKQMMELAIL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL P+EEA Y+QLI + TQ ++ +GKSR H+AN +R+L LP ++E+I
Sbjct: 112 ENLQREDLTPMEEAAAYQQLIEKLKMTQEELAKRLGKSRPHIANHIRLLSLPPKIQELIS 171
Query: 188 KEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+I++GH R L + A + + ++VR E+L+ + + K +
Sbjct: 172 SGKITMGHGRALLGLRQKEKVQATADRAIKEGLNVRQLEQLIHHLNELVPRETKKVKQP- 230
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRN--NKGQFCIKYETNEQLKIICSLLGE 295
K+ ++ E + + G +SIK NKG+ I++ + + L I +L +
Sbjct: 231 -KDVFIKAQETSLRERFGTPVSIKQNKNQNKGKIEIEFFSKDDLDRILQILDQ 282
>gi|238926039|ref|YP_002939557.1| stage 0 sporulation protein J [Eubacterium rectale ATCC 33656]
gi|238877716|gb|ACR77423.1| stage 0 sporulation protein J [Eubacterium rectale ATCC 33656]
Length = 296
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 114/294 (38%), Positives = 180/294 (61%), Gaps = 8/294 (2%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
+K+ LG+GL +LI + + P K I I+ + PN PR F+ + L +
Sbjct: 3 AKKGLGKGLDSLITD---KVSKPVKPKSNHAADAVMIDINKVEPNREQPRKKFDEDALIE 59
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK GI+QPL+ + D Y+I+AGERR+RAAK+A L EVPVII+ + N+ +EI+
Sbjct: 60 LSESIKQFGILQPLLCQERD-DYYEIVAGERRWRAAKLAGLKEVPVIIKKLTNQQIMEIS 118
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEAL Y++L+ E+ Q+D+ V KSR+ V N +R+LKL V++M
Sbjct: 119 LIENIQREDLNPIEEALAYKRLLEEFKLKQDDVAERVSKSRTAVTNSMRLLKLNEKVQQM 178
Query: 186 IRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ E ++ GHAR L+ + +AQ I +K+SVRDTE+LV+ K+K K
Sbjct: 179 VIDEMLTTGHARALLGIEDQNQQYVVAQQIFDQKLSVRDTEKLVKSLQKNKKKTKSEKTV 238
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLGE 295
+ + E DLE+K+ +G + I +N N G+ I+Y ++++L I ++L
Sbjct: 239 NPQMEAIYKDLEEKLKKNMGTKVLINRKNENSGKIEIEYYSHDELDRIVNMLNS 292
>gi|120407000|ref|YP_956829.1| parB-like partition proteins [Mycobacterium vanbaalenii PYR-1]
gi|119959818|gb|ABM16823.1| chromosome segregation DNA-binding protein [Mycobacterium
vanbaalenii PYR-1]
Length = 334
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 99/332 (29%), Positives = 165/332 (49%), Gaps = 36/332 (10%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVNQSIDSP-------------------------EKKTET 34
M+N KR LGRGLA+LI P
Sbjct: 1 MNNQARKRSGLGRGLASLIPTGPAEGGEPATLGPKMGAAAADVVLGGAPVAPPASTDVNP 60
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID------NGL 88
+ I+ I PNP PR F+ E L +L SI+ G++QP++VRA +
Sbjct: 61 VGAVYREIAPSQIDPNPRQPRQVFDEEALAELVHSIREFGLMQPIVVRATPGGEGESSDR 120
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+++ GERR+RAA++A ++ +P I+R + S L A++EN+ R LNPLEEA Y+QL+
Sbjct: 121 YQLVMGERRWRAAQLAGVATIPAIVRETADDSMLRDALLENIHRVQLNPLEEAAAYQQLL 180
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS----TSD 204
E+ T N++ + +G+SR + N++R+L+LP +V+ + +S GHAR L+S
Sbjct: 181 EEFDVTHNELATRIGRSRPVITNMIRLLRLPIAVQRRVAAGVLSAGHARALLSLEAGPEA 240
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
LA IV++ +SVR TEE V + E + L D+ +++S+
Sbjct: 241 QEELAARIVAEGLSVRATEEAVTLANRNGEAPPTAPRRKPIQMPGLQDVAEQLSTAFDTR 300
Query: 265 ISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+++ KG+ +++ + + L+ I L+ +
Sbjct: 301 VTVSLGKRKGKIVVEFGSVDDLQRIVELMNAS 332
>gi|114799854|ref|YP_762231.1| chromosome partitioning protein ParB [Hyphomonas neptunium ATCC
15444]
gi|114740028|gb|ABI78153.1| chromosome partitioning protein ParB [Hyphomonas neptunium ATCC
15444]
Length = 321
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 126/301 (41%), Positives = 170/301 (56%), Gaps = 15/301 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPE-----------SQDCISIHSIVPNPHNPRN 56
RLGRGL+ALIGEV P +T E + I+I I NP PR
Sbjct: 13 SRLGRGLSALIGEVEAMNVRPAAQTSPSGEAGAASGATSSGGTNEIAIDLIRRNPAQPRR 72
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIR 114
F E L +L S+K+ G++Q ++VR Y+IIAGERR+RAA+MA LS +P +IR
Sbjct: 73 TFTEENLRELADSLKAKGVLQAILVRPDPKEAGKYQIIAGERRWRAARMAGLSTIPAVIR 132
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
NVD LEI I+ENVQR DLNP+EEA Y+ L+ +G TQ + S VGKSR+H+ N LR
Sbjct: 133 NVDELELLEIGIIENVQRSDLNPIEEAEAYDALMKRFGRTQESLASSVGKSRAHITNTLR 192
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+L+LP S R +R+ IS GHAR + DP +L ++ V K +SVR+ E +E + +
Sbjct: 193 LLQLPESARVHVREGRISAGHARAALGAPDPEALIELAVGKGLSVREVEARAREAKDTRP 252
Query: 235 KRKKIFEG--SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
K + K+ LE IS +GL + I+H N G+ IKY EQL +C
Sbjct: 253 IETKSMDSLTPAAKDINTEALEADISRTLGLEVDIRHSRNGGEIRIKYRDLEQLDEVCRR 312
Query: 293 L 293
L
Sbjct: 313 L 313
>gi|260063465|ref|YP_003196545.1| putative ParB-like chromosome partitioning protein [Robiginitalea
biformata HTCC2501]
gi|88782909|gb|EAR14083.1| putative ParB-like chromosome partitioning protein [Robiginitalea
biformata HTCC2501]
Length = 298
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 164/301 (54%), Gaps = 8/301 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDS-PEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I S +K + + S + I SI NP PR+ F
Sbjct: 1 MAKATKKQALGRGLSALLKDPENDIQSVSDKHADKVVGSIVELDIRSIEVNPFQPRSNFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L++L SIK G+IQP+ VR + Y++++GERR+RA++ L +P IR +++
Sbjct: 61 DEALDELASSIKELGVIQPITVRKLGFDKYQLVSGERRYRASQRIGLESIPAYIRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+LE+A+VEN+QR+DL+P+E AL Y++LI E G TQ + VGK RS V N LR+LKL
Sbjct: 121 ETLEMALVENIQRQDLDPVEIALSYQRLIDEIGLTQEKLSDRVGKKRSTVTNYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKEKR 236
V+ +R IS+GH R LV+ D ++ +SVR TE LV+ NK +
Sbjct: 181 PIVQTGMRDGFISMGHGRCLVNVDDRGEQLRIYEKILADNLSVRQTEALVRSLGNKPASK 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ E + + S + +S++ KG+ I + + E+ + + +
Sbjct: 241 TAARKELPEFASDGLSV---LKSYLDAPVSVQASGKGKGKITIPFHSKEEFRRLKKRITG 297
Query: 296 N 296
+
Sbjct: 298 D 298
>gi|254427419|ref|ZP_05041126.1| ParB-like nuclease domain family [Alcanivorax sp. DG881]
gi|196193588|gb|EDX88547.1| ParB-like nuclease domain family [Alcanivorax sp. DG881]
Length = 304
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 94/309 (30%), Positives = 172/309 (55%), Gaps = 20/309 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGE-------------VNQSIDSPEKKTETIPESQDCISIHSI 47
M+ KR L +GL AL+ N+ + E + + +
Sbjct: 1 MA-AKRKRGLSKGLDALLSSNESYQRHQEEVSLQNEGEATGEPDQRPRDGELRHLPVECM 59
Query: 48 VPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLS 107
+ PR + LE+L +SI++ G++QP++VR + + Y+IIAGERR+RAA+MA L
Sbjct: 60 ERGRYQPRRDMSPDALEELAESIRAQGVMQPIVVRPLGDKRYEIIAGERRWRAAQMAELD 119
Query: 108 EVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRS 167
+P +IR V +++++ +A++EN+QR++LNP+EEA+ +L E+G T + VGKSR+
Sbjct: 120 TIPAVIREVPDEAAIAMALIENIQRENLNPMEEAIALGRLKEEFGLTHQQVADAVGKSRA 179
Query: 168 HVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEEL 225
V N+LR++ L S V++++ ++ +GHAR L ++ + + A+ +V+K +SVR TEEL
Sbjct: 180 MVTNLLRLMSLESDVKKLLEHGDLEMGHARALLALTGNKQIEAARTVVAKGLSVRQTEEL 239
Query: 226 VQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQ 285
V++ + K + + + + L +S ++G + I+ + KG+ I Y ++
Sbjct: 240 VRDFEKAKPAKPAAPKE----DPNVKALISDLSDRLGAPVQIQQQGKKGKLVISYNNLDE 295
Query: 286 LKIICSLLG 294
L I + +
Sbjct: 296 LDGILAHIK 304
>gi|288927454|ref|ZP_06421301.1| spoOJ protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288330288|gb|EFC68872.1| spoOJ protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 297
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 168/304 (55%), Gaps = 17/304 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI S E + + I + I PNP+ PR F+
Sbjct: 1 MAVHKKFNALGRGLDALI--------STESVRPQGSSTINEIPLEQIEPNPNQPRREFDE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L++L SI GIIQP+ +R +++ ++IIAGERR+RA+++A L +P IR + ++S
Sbjct: 53 DALQELANSINEIGIIQPITLRQVEDNKFQIIAGERRWRASQLAGLQAIPAYIRTIKDES 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A+VEN+QR+DLN +E AL YE L+S G TQ + VGKSR+ + N LR+LKLP+
Sbjct: 113 IMELALVENIQREDLNAIEIALAYEHLLSAEGMTQERVSERVGKSRTAITNYLRLLKLPA 172
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR- 236
V+ ++K+EI +GHAR L++ P + I SVR EEL Q+ N ++ +
Sbjct: 173 QVQMALQKKEIDMGHARALLAIDSPSLQIKLFREIQKHGYSVRKVEELAQKLKNGEDIQS 232
Query: 237 -KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIIC---S 291
KK + +T + +++S + + + KG+ I + E+L I
Sbjct: 233 GKKTIATKAAMPEEVTRIRQRLSDFLDTKVQMTCSPKGKGKISIPFANEEELARIMAAFD 292
Query: 292 LLGE 295
L E
Sbjct: 293 KLKE 296
>gi|182416743|ref|ZP_02948140.1| stage 0 sporulation protein J [Clostridium butyricum 5521]
gi|237669623|ref|ZP_04529601.1| stage 0 sporulation protein J [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379400|gb|EDT76895.1| stage 0 sporulation protein J [Clostridium butyricum 5521]
gi|237654857|gb|EEP52419.1| stage 0 sporulation protein J [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 287
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 108/291 (37%), Positives = 178/291 (61%), Gaps = 11/291 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL+ALI E + ++K + I ++ I + + PR F+++ + +
Sbjct: 3 KKFALGKGLSALIPEDLVESEQQDEKGK------MLIPLNEIRNDNNQPRKAFDNDKIAE 56
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK+HGIIQPLI+R D+GLY I+AGERR+RAAKMA L +VP I+ + K LEI+
Sbjct: 57 LTESIKTHGIIQPLILRKSDDGLYVIVAGERRWRAAKMAGLKDVPAIVMELSEKDVLEIS 116
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEA Y++L+S++ TQ D+ +GKSR+ + N +R++ L V++
Sbjct: 117 LIENIQRQDLNPIEEASAYKKLLSDFNLTQEDLSKRIGKSRTAITNTMRLMNLDIRVQQY 176
Query: 186 IRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
I + I+ GH R L+ D Q ++ + +SVR+ E LV+ K +K E
Sbjct: 177 IIEGIITEGHGRALLGIKDKEIQYELSQKVIDENLSVRELERLVKRILEGKTSEEK--ET 234
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E Y +++ ++ S G +SI ++NNKG+ I+Y + + L+ I ++
Sbjct: 235 NNELNPYYKEIKNQLQSYFGTKVSISNKNNKGKIEIEYYSEDDLQRILDII 285
>gi|212217720|ref|YP_002304507.1| chromosome partitioning protein [Coxiella burnetii CbuK_Q154]
gi|212011982|gb|ACJ19362.1| chromosome partitioning protein [Coxiella burnetii CbuK_Q154]
Length = 290
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 167/296 (56%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS KR LGRGL+ L G + + ++I I P + PR +
Sbjct: 1 MSM-TQKRGLGRGLSDL-GLNELLTEINDASLADSKTELKKLTIDVIQPGRYQPRRQMDK 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI++ GIIQP++VR + Y+IIAGERR+RAA++A L EVP +IR + +++
Sbjct: 59 DALEELANSIRAQGIIQPIVVRPVGQR-YEIIAGERRWRAAQLAGLKEVPAVIRPITDEA 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ ++++EN+QR++LN +EEA ++L+ E+ T +I VGKSR+ V N LR+LKL
Sbjct: 118 AIAMSLIENIQRQNLNAIEEAAALQRLLDEFKMTHEEIAEAVGKSRTSVTNSLRLLKLNP 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ + + +GHAR L + A +I+ + +SVR+TE+L+ + K
Sbjct: 178 DVKALLEQGHLDMGHARALLALEGFQQSEAANIIIKRALSVRETEKLI----QHWQSEGK 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + L+ +S K+G ++I+H KG+ I Y + ++L+ I +
Sbjct: 234 SSANRPSMDPDVARLQHHLSDKLGSAVTIRHGAKGKGKLIIHYNSADELEGILDRI 289
>gi|238025744|ref|YP_002909975.1| ParB-like partition protein [Burkholderia glumae BGR1]
gi|237874938|gb|ACR27271.1| ParB-like partition protein [Burkholderia glumae BGR1]
Length = 295
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 179/299 (59%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVAKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALDRLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR + ++IIAGERRFRAA++A L+EVPV++R V +++
Sbjct: 56 GALQELAASIRAQGVMQPILVRPVGADRFEIIAGERRFRAARLAGLAEVPVLVRQVTDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L +
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFDFTHEQAAESVGRSRSAVSNLLRLLNLAA 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K++SVR+TE+LV + + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRLSVRETEKLVAQTTKEAPALKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + N+ IK R +GQ I + + L+ I L N
Sbjct: 236 KSKDDGGRD--TRRLEEELSDLLASNVKIKLGRRGRGQLTIDFGDLDALEGILVRLRGN 292
>gi|226952974|ref|ZP_03823438.1| chromosome partitioning protein ParB [Acinetobacter sp. ATCC 27244]
gi|294650556|ref|ZP_06727913.1| chromosome partitioning protein [Acinetobacter haemolyticus ATCC
19194]
gi|226836295|gb|EEH68678.1| chromosome partitioning protein ParB [Acinetobacter sp. ATCC 27244]
gi|292823553|gb|EFF82399.1| chromosome partitioning protein [Acinetobacter haemolyticus ATCC
19194]
Length = 295
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 97/299 (32%), Positives = 181/299 (60%), Gaps = 15/299 (5%)
Query: 1 MSNNYSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR L GRGL AL+G + + E + I ++ + + PR +
Sbjct: 1 MS--IKKRGLAKGRGLDALLGSIQKEKLQLEAQA-LDHGQLKQIDVNLLKRGEYQPRRFI 57
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ + L++L SI+ HG++QP+++R +D Y+IIAGERR+RAA++A L+E+P I+R +
Sbjct: 58 QEQDLQELASSIEKHGVMQPIVIRPVDDEQFPYEIIAGERRWRAAQLAGLTEIPAIVREL 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+++ ++ +A++EN+QR+DLNP+++AL ++ E+G + +I VGK+R+ V+N+LR+L
Sbjct: 118 NDQVAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIAETVGKARTTVSNLLRLL 177
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L +++ +++ +I +GHAR + + D + +A++++ K +SVR TE+LV+E +
Sbjct: 178 SLADPIKDFMQQGQIDMGHARAILSLKAKDQMDVAKIVIEKSLSVRQTEQLVREWNE--- 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
K + + + L +K+S + G N+ I H KG+ I Y + ++L I ++
Sbjct: 235 --PKPEKEKVQVSPDIEQLTQKLSERFGANVKIDHNQKGKGKMVIHYHSLDELDGILNI 291
>gi|119357888|ref|YP_912532.1| chromosome segregation DNA-binding protein [Chlorobium
phaeobacteroides DSM 266]
gi|119355237|gb|ABL66108.1| chromosome segregation DNA-binding protein [Chlorobium
phaeobacteroides DSM 266]
Length = 296
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 170/301 (56%), Gaps = 11/301 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD-CISIHSIVPNPHNPRNYFE 59
M+ K+ LG+GL ALI + S D ++ E + + + + I NP PR F+
Sbjct: 1 MA--MLKKALGKGLKALIPDEGFSSDPKQEVHEPLLDGVVGSLPVEKIRANPFQPRKTFD 58
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDN 118
LE+L SI +G+IQP+ V D Y++I+GERR RA A +P I + ++
Sbjct: 59 ETALEELKNSIIENGVIQPVTVCR-DGEGYQLISGERRLRAVTQAGFKFIPAYIIDAHED 117
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
S LE+A++EN+QR+DLN +E AL + L ++ TQ++I VGK+RS V+N LR+LKL
Sbjct: 118 SSKLELALIENIQREDLNAIEVALALKSLTTKCSLTQDEIAQKVGKNRSTVSNFLRLLKL 177
Query: 179 PSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P ++++ IR EIS GHAR L L + + I+++++SVR TE LV +++
Sbjct: 178 PMAIQDSIRNREISSGHARALINLPGEQQQLKVWKQILARQLSVRQTEALVNGM--FRDQ 235
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLLG 294
K++ ++ L +E ++ + + I+ R KG+ I+Y + + L+ I ++G
Sbjct: 236 EKQVPGKPEDRSPQLGLIETRLRDRFATKVKIIEKRAGKGEIHIQYFSPDDLERILDIVG 295
Query: 295 E 295
+
Sbjct: 296 D 296
>gi|108802365|ref|YP_642562.1| chromosome segregation DNA-binding protein [Mycobacterium sp. MCS]
gi|119866058|ref|YP_936010.1| chromosome segregation DNA-binding protein [Mycobacterium sp. KMS]
gi|126438345|ref|YP_001074036.1| chromosome segregation DNA-binding protein [Mycobacterium sp. JLS]
gi|108772784|gb|ABG11506.1| chromosome segregation DNA-binding protein [Mycobacterium sp. MCS]
gi|119692147|gb|ABL89220.1| parB-like partition protein [Mycobacterium sp. KMS]
gi|126238145|gb|ABO01546.1| chromosome segregation DNA-binding protein [Mycobacterium sp. JLS]
Length = 330
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 97/327 (29%), Positives = 164/327 (50%), Gaps = 32/327 (9%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVNQSIDSPEK-----------------------KTETIP 36
M+ KR LGRGLA+LI S +
Sbjct: 1 MTQPTRKRSGLGRGLASLIPTGPTEDGSQAALGGPRMGNAAADVVIGGGPVAAPPAPELG 60
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN----GLYKII 92
I +I PNP PR F+ E L +L SI+ G++QP++VRA++ Y+++
Sbjct: 61 AVYREIDPSAIEPNPRQPRQVFDGEALAELVHSIREFGLMQPIVVRALEPGDAGPRYQLV 120
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
GERR+RAA+ A L+ +P I+R + S L A++EN+ R LNPLEEA Y+QL+ E+G
Sbjct: 121 MGERRWRAAQEAGLATIPAIVRETADDSMLRDALLENIHRVQLNPLEEAAAYQQLLDEFG 180
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS----TSDPLSL 208
T +++ + +G+SR + N++R+L+LP +V+ + +S GHAR L++ L
Sbjct: 181 VTHDELAARIGRSRPVITNMIRLLRLPIAVQRRVAAGVLSAGHARALLALEGGPERQEEL 240
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK 268
A IV++ +SVR TEE V ++ + L D+ +++S+ +++
Sbjct: 241 AARIVAEGLSVRATEEAVTLANHSGPAAPPAPRRKPIQMPGLQDVAEQLSTAFDTRVTVS 300
Query: 269 HRNNKGQFCIKYETNEQLKIICSLLGE 295
KG+ +++ + + L+ I L+
Sbjct: 301 LGKRKGKIVVEFGSVDDLQRIVELMNS 327
>gi|167462786|ref|ZP_02327875.1| Spo0J-like protein, ParB-like nuclease domain [Paenibacillus larvae
subsp. larvae BRL-230010]
Length = 286
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 99/289 (34%), Positives = 170/289 (58%), Gaps = 15/289 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLGRGL AL+ ++ D + I + + NP+ PR F +G+++L
Sbjct: 3 KRLGRGLDALLPSMDIEDD----------DKVIEIPLSKLRANPYQPRKSFNEDGIQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG+IQP+IVR++ Y+IIAGERRFRA++ L +P +++ ++ +EIA++
Sbjct: 53 ASIKEHGVIQPIIVRSV-LKGYEIIAGERRFRASQACGLKSIPAVVKKFSDQQVMEIALI 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
ENVQR+DLN LE A+ Y+ +I ++ TQ ++ + VGKSRSH+AN LR+L LP S+++ +
Sbjct: 112 ENVQREDLNALEIAIAYQAIIDQFSLTQEELSAKVGKSRSHIANFLRLLTLPDSIKQHVS 171
Query: 188 KEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ +S+GHAR + LA + ++ SVR EE +++ + K +
Sbjct: 172 RGTLSMGHARAIVGVKDNQKKQILADACIREQWSVRQLEEEIKKLEGN-SGNAKKKSKDK 230
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+++ Y+ +E ++ + IKH+ NKG+ + Y +N+ L+ + +L
Sbjct: 231 KRDPYIQQVEDQLRDVYRTTVKIKHQKNKGKIELLYYSNDDLERLLDML 279
>gi|56477073|ref|YP_158662.1| ParB-like partition protein [Aromatoleum aromaticum EbN1]
gi|56313116|emb|CAI07761.1| ParB-like partition protein [Aromatoleum aromaticum EbN1]
Length = 289
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 100/297 (33%), Positives = 172/297 (57%), Gaps = 17/297 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL AL+ + + + + P + PR +
Sbjct: 1 MTRPKLK-GLGRGLDALLAGNQDD--------DAERGELQALPVGDLRPGKYQPRTRMDP 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L SIK+ G++QP++VR ++ Y+IIAGERR+RAA++A L++VP ++R + +++
Sbjct: 52 GSLEELAASIKAQGVMQPILVRPVNGSAYEIIAGERRWRAAQIAELADVPCLVREIPDEA 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L ++++EN+QR+DLNPLEEA G ++LI E+G T VG+SR +N+LR+L L
Sbjct: 112 ALAMSLIENIQREDLNPLEEAGGIQRLIDEFGMTHQQAADAVGRSRPAASNLLRLLNLAR 171
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+E++ +I +GHAR ++ + LA + ++ +SVRDTE LVQ+ N +
Sbjct: 172 PVQELLMAGDIDMGHARAMLPLDGAGQIQLANHVAARGLSVRDTERLVQQSLN-----PR 226
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ RE ++ L +E+ I+ +G + IK ++ G+ I++ + +QL + LG
Sbjct: 227 QKKAEREPDRDLLRIEEDIADVLGATVRIKANKKGAGEVTIRFGSLDQLDGLLESLG 283
>gi|332971421|gb|EGK10379.1| chromosome partitioning protein SpoOJ [Desmospora sp. 8437]
Length = 290
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 100/293 (34%), Positives = 168/293 (57%), Gaps = 15/293 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+GL AL + + + + + I++ + NP+ PR +F+ + L++L
Sbjct: 5 KALGKGLGALFPDAQVNDE----------DVVNEIAVDELRANPYQPRKHFDPDALQELI 54
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
S+K HG++QPL+VR Y+I+AGERRFRAAK A L VPV++R ++ +EIA++
Sbjct: 55 SSVKEHGVVQPLVVRK-SIRGYEIVAGERRFRAAKEAGLDRVPVVVREFTDEQMMEIALI 113
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLN +E A Y++L+ + TQ ++ VGKSR HV N LR+L+LP V+E +
Sbjct: 114 ENLQREDLNSIEIAQAYQKLMDRFSLTQEEMAKRVGKSRPHVTNYLRLLQLPREVQEDVS 173
Query: 188 KEEISLGHARTLVSTSDPL---SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ +S+GHAR L D LA+ V +++SVR EE VQ+ + ++ +K + S+
Sbjct: 174 RGTLSMGHARALRGVKDREALLKLAKRAVKEEVSVRQLEEWVQQVNEGVKRTRKKKDPSQ 233
Query: 245 EK-EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
E + + I+H KG+ I+Y + +L+ + +L ++
Sbjct: 234 TPLPPQFKRYEDVLQEAYSTPVRIRHGRKKGRIEIEYYSERELERLVEMLQKD 286
>gi|302672304|ref|YP_003832264.1| chromosome partitioning protein ParB1 [Butyrivibrio proteoclasticus
B316]
gi|302396777|gb|ADL35682.1| chromosome partitioning protein ParB1 [Butyrivibrio proteoclasticus
B316]
Length = 300
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 171/301 (56%), Gaps = 6/301 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LG+GL ++I + + + I + ++I + PN + PR F+
Sbjct: 1 MATKSVKRGLGKGLDSIIPAKVSPAKEVKIEEKHIEGQVEKVNITKVEPNRNQPRKTFDE 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L +L SIK GII PLIV+ Y+I+ GERR+RAAK A L EVPVII+++ +
Sbjct: 61 DKLLELADSIKQFGIINPLIVKDRG-DHYEIVGGERRWRAAKKAGLKEVPVIIKDLSEQE 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A+++N+QR+D+NP+EEAL Y++LI E+GYTQ+ + V KSR + N LR+LKL
Sbjct: 120 IAEVALIDNIQREDINPIEEALAYKKLIDEFGYTQDVVADKVSKSRVTITNSLRLLKLCD 179
Query: 181 SVREMIRKEEISLGHARTLVS---TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
VREM+ + +S GHAR L+ + LAQ + +K+SVR+TE+LV+ K K
Sbjct: 180 KVREMVIEGLLSTGHARALIPVENPDEQYELAQKVFDEKLSVRETEKLVKNLGKTTPKNK 239
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQLKIICSLL-GE 295
K + + L +K +G + I + + G I++ N+ L+ I + E
Sbjct: 240 KKAQNQESIDAVYGSLSEKCKQALGTKVDISSKGDGVGLIQIEFYNNDDLEKIIERICKE 299
Query: 296 N 296
N
Sbjct: 300 N 300
>gi|161830965|ref|YP_001597742.1| ParB-like partition protein [Coxiella burnetii RSA 331]
gi|161762832|gb|ABX78474.1| ParB-like partition protein [Coxiella burnetii RSA 331]
Length = 288
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 165/290 (56%), Gaps = 9/290 (3%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
KR LGRGL+ L G + + ++I I P + PR + + LE+L
Sbjct: 4 KRGLGRGLSDL-GLNELLTEINDASLADSKTELKKLTIDVIQPGRYQPRRQMDKDALEEL 62
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SI++ GIIQP++VR + Y+IIAGERR+RAA++A L EVP +IR + +++++ +++
Sbjct: 63 ANSIRAQGIIQPIVVRPVGQR-YEIIAGERRWRAAQLAGLKEVPAVIRPITDEAAIAMSL 121
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR++LN +EEA ++L+ E+ T +I VGKSR+ V N LR+LKL V+ ++
Sbjct: 122 IENIQRQNLNAIEEAAALQRLLDEFKMTHEEIAEAVGKSRTSVTNSLRLLKLNPDVKALL 181
Query: 187 RKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ + +GHAR L + A +I+ + +SVR+TE+L+ + K
Sbjct: 182 EQGHLDMGHARALLALEGFQQSEAANIIIKRALSVRETEKLI----QHWQSEGKSSANRP 237
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + L+ +S K+G ++I+H KG+ I Y + ++L+ I +
Sbjct: 238 SMDPDVARLQHHLSDKLGAAVTIRHGAKGKGKLIIHYNSADELEGILDRI 287
>gi|217968664|ref|YP_002353898.1| parB-like partition protein [Thauera sp. MZ1T]
gi|217505991|gb|ACK53002.1| parB-like partition protein [Thauera sp. MZ1T]
Length = 283
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 171/296 (57%), Gaps = 17/296 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL AL+ + ++ E + ++ P + PR +
Sbjct: 1 MNKPRLK-GLGRGLDALL--------AANQEEEAEKGELQSLPTIALQPGKYQPRTRMDP 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L SIK+ G++QP++VR + Y+IIAGERR+RA+++A L+EVP ++R + +++
Sbjct: 52 GSLEELAASIKAQGVMQPIMVRPVGEDAYEIIAGERRWRASQIAGLAEVPCLVREIPDEA 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L ++++EN+QR+DLNPLEEA G ++LI E+ T VG+SR +N+LR+L L
Sbjct: 112 ALAMSLIENIQREDLNPLEEAGGIQRLIDEFDMTHQQAADAVGRSRPAASNLLRLLNLAK 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+E++ ++ +GHAR L+ + + ++++SVRDTE LVQ+ N +
Sbjct: 172 PVQELLMAGDLDMGHARALLPLDAASQIQLGNQVAARQLSVRDTERLVQQILN-----PR 226
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ ++ L LE++I+ +G + IK ++N G+ I++ + +QL + L
Sbjct: 227 QKKPVPPPDRDLLRLEEEIADAIGATVKIKANKNGAGELTIRFGSLDQLDGVLGRL 282
>gi|319651090|ref|ZP_08005224.1| Spo0J protein [Bacillus sp. 2_A_57_CT2]
gi|317397260|gb|EFV77964.1| Spo0J protein [Bacillus sp. 2_A_57_CT2]
Length = 281
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 98/290 (33%), Positives = 160/290 (55%), Gaps = 11/290 (3%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+GL A + + E+ + I I PNP+ PR FE E +E+L
Sbjct: 3 KGLGKGLNAFFNNIETEKE----------ETVQEVKIKDIRPNPYQPRKVFEKEAIEELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI HGI+QP+IVR Y+I+ GERR+RAAK A+L VPV+IR ++ + +E+A++
Sbjct: 53 QSILEHGILQPIIVRK-SIKGYEIVVGERRYRAAKEANLERVPVVIRELNEQQMMELAVL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL P+EEA Y+ L+ + TQ ++ +GKSR H+AN +R+L LP ++ +I
Sbjct: 112 ENLQREDLTPIEEAAAYQLLMEKLKVTQEELAKRLGKSRPHIANHIRLLSLPPKIQGLIS 171
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+IS+GH R L+ L ++ + +L Q + ++ + + K+
Sbjct: 172 DGKISMGHGRALLGLRKKEKLQALVEKTVKDGLNVRQLEQLIQQLNDVSRETKKPNAPKD 231
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++ + E + + G + IK NKG+ I++ + E L+ I LL N
Sbjct: 232 IFIKERESSLRERFGTTVHIKQSKNKGKIEIEFFSKEDLERIMELLETNS 281
>gi|116617472|ref|YP_817843.1| chromosome segregation DNA-binding protein [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|116096319|gb|ABJ61470.1| chromosome segregation DNA-binding protein [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 299
Score = 152 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 165/297 (55%), Gaps = 15/297 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPE-----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
K LG+G+ +L G N S ++ E K + E + + I PNP PR +F+
Sbjct: 4 KKGGLGKGMNSLFGANNVSKEAVEHTKVVTKEQEATEQVVKLPLKDIQPNPFQPRYHFDE 63
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI +G++ P+IVR I ++IIAGERR RA+K++ L + I+R+VD+ +
Sbjct: 64 SKLKELSASITENGVLTPIIVRQIGQK-FEIIAGERRVRASKLSGLKSISAIVRHVDDDT 122
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+A++EN+QR DL+ +EEA ++ L++ TQ ++ VGK R+ VAN+LR+LKLP
Sbjct: 123 MAALALIENLQRDDLDAIEEAQAFDALMTRLQMTQAEVAEKVGKDRATVANLLRLLKLPE 182
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
SV+ +I+ E+S+G AR L +A+ +V + ++VR E LV++ ++
Sbjct: 183 SVQVLIQDGELSMGQARALLGLKKKPQIEKVAETVVFRGLNVRQVENLVRQMNDGV---- 238
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
++E + L ++ K G + + R G+ I Y +NE L I +LL
Sbjct: 239 -PEPNTKEISPFAVSLSNQLEEKFGTKVKVNAGRKGNGKIEINYVSNEDLSRILALL 294
>gi|167038663|ref|YP_001666241.1| parB-like partition protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320117055|ref|YP_004187214.1| parB-like partition protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166857497|gb|ABY95905.1| parB-like partition protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319930146|gb|ADV80831.1| parB-like partition protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 286
Score = 152 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 112/291 (38%), Positives = 183/291 (62%), Gaps = 16/291 (5%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LGRGL ALI E P+ + I+I I PN + PR F+ + L++L
Sbjct: 4 KKGLGRGLQALIPEYRTEE----------PQGVETINIAYIHPNQYQPRKQFDEDSLKEL 53
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
+SIK +G+IQP+IVR +D+G Y+I+AGERR+RAAK+A LSE+P I+R+ D+ +EIA+
Sbjct: 54 AESIKQNGVIQPIIVRKVDSG-YQIVAGERRWRAAKIAGLSEIPAIVRDFDDLQVMEIAL 112
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLNP+EEA Y+ LI ++ TQ +I +GKSRS +AN +R+L L V+EM+
Sbjct: 113 IENLQREDLNPIEEAKAYKALIEQFNLTQEEISKKIGKSRSVIANSIRLLNLDDRVQEML 172
Query: 187 RKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
K +I++GHA+ + + S A+ +V + ++VR+TE LV+ K EK + + +
Sbjct: 173 VKGDITIGHAKVILSLPNKSLQYEAAKKVVEENLNVRETENLVKNLLRKNEKNSQKTKSN 232
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ ++E + S +G + I + ++G I+Y + E L I ++
Sbjct: 233 K-IDVHIKEIEDDLCSFLGTKVKISQKSKDRGIIQIEYYSEEDLTRIIEII 282
>gi|268320132|ref|YP_003293788.1| chromosome partitioning protein ParB [Lactobacillus johnsonii
FI9785]
gi|262398507|emb|CAX67521.1| chromosome partitioning protein ParB [Lactobacillus johnsonii
FI9785]
Length = 293
Score = 152 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 106/296 (35%), Positives = 165/296 (55%), Gaps = 11/296 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S KR LGRGL AL E Q ++ E IS+ I PNP+ PR F+++
Sbjct: 5 SKEPKKRGLGRGLEALFDESPQVQETEE---------ITEISLDEIRPNPYQPRKTFDNK 55
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L +SIK +G+ QP+I+R Y+IIAGERRFRA+K+A +P IIR+ D
Sbjct: 56 SLKELSESIKENGVFQPIIIRK-SVNGYEIIAGERRFRASKLAKKKTIPAIIRDFDEAQM 114
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A++EN+QR+DL PLEEA YE L G TQ ++ +GKSR ++AN LR+L LP
Sbjct: 115 MEVAVLENLQREDLTPLEEAQAYEMLQKNLGLTQAEVSKRLGKSRPYIANYLRLLTLPQK 174
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ ++++ E+S+G ARTL+ D + + + +L EK KK +
Sbjct: 175 TKRLLQRGELSMGQARTLLGLKDKDRIDDLARKVVKNGITVRQLESLVAKLNEKEKKPKK 234
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ +K ++ E +++ K G +++I + G I + + ++L I LLG N
Sbjct: 235 KAIKKSAFIRASESQLTDKFGTSVNITESKRGNGHLAIDFASTDELNRILDLLGIN 290
>gi|228471245|ref|ZP_04056058.1| spoOJ protein [Porphyromonas uenonis 60-3]
gi|228307060|gb|EEK16142.1| spoOJ protein [Porphyromonas uenonis 60-3]
Length = 298
Score = 152 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 177/304 (58%), Gaps = 23/304 (7%)
Query: 1 MSNNYS-KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+N + +GRGL AL+G+V+ S S I+I I PNP PR +F+
Sbjct: 1 MTNKKKENKVIGRGLDALLGDVSNS------------SSISEIAIDKIEPNPDQPRTHFD 48
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E LE+L SI++ GI+QP+ VR + +G + II+GERR+RA+K+A+L+ +P I +++
Sbjct: 49 PESLEELAASIRALGIVQPITVRELTDGRHLIISGERRWRASKLANLTSIPAYIVKANDE 108
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+E+A++EN+QR+DLN +E AL Y++L+ TQ ++ VGK+RS ++N LR+L+LP
Sbjct: 109 QVVEMALIENIQREDLNAIEIALTYKRLLEHSEGTQEELAKKVGKTRSSISNYLRLLRLP 168
Query: 180 SSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ V+ + +++I +GHAR + + L L Q +++ +SVR E L E E+
Sbjct: 169 AEVQLGLTEKKIDMGHARAILSLTDPAQQLKLYQTTLTEHLSVRQVEALANEMREPTEET 228
Query: 237 KKIFEGSREKEK------YLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKII 289
K + + K L K++SS G +S++ + KG I + + EQL I
Sbjct: 229 PKASKKRQTLSKLASSGNDYAPLAKQLSSFFGTKVSLRCKESGKGTITIPFSSEEQLIEI 288
Query: 290 CSLL 293
CS+L
Sbjct: 289 CSIL 292
>gi|262277797|ref|ZP_06055590.1| chromosome-partitioning protein ParB [alpha proteobacterium
HIMB114]
gi|262224900|gb|EEY75359.1| chromosome-partitioning protein ParB [alpha proteobacterium
HIMB114]
Length = 288
Score = 152 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 107/291 (36%), Positives = 180/291 (61%), Gaps = 8/291 (2%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
+ LG+GL+AL+G+ N D + E D IH +VPN + PR F+ + L++
Sbjct: 3 KTKGLGKGLSALLGDSNN--DEKKNVVELSNVKTDKTPIHLLVPNQYQPRKNFDKKQLDE 60
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK+ GIIQP+ VR +G ++IIAGERR+RAA++A + +VP ++ + D++ + E A
Sbjct: 61 LATSIKTRGIIQPIAVRKSKDGKFEIIAGERRWRAAQLAKVHDVPTVLLDADDELAAEFA 120
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++ENVQR+ LN LEEA GY+ LI ++ YTQ+ I ++GKSR ++AN LR+ +LP+ +++M
Sbjct: 121 VLENVQREGLNALEEAEGYQTLIDKFSYTQDKIAEMIGKSRVYIANTLRLKRLPNEIQDM 180
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
I ++ GHAR+L+ ++ + LA+ I++K +SVR E L +++ R
Sbjct: 181 ITNGLLTPGHARSLIDVNNNVELAKEIINKNLSVRQAELLSKKKATF-----SKKIKIRN 235
Query: 246 KEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGE 295
+ + DLE + K G+ + I + +NNKG+ +Y+ +QL + + +
Sbjct: 236 IDPNIKDLENSLEQKTGMKVIIDNKKNNKGKITFEYKGLDQLNQLVANVKS 286
>gi|330813396|ref|YP_004357635.1| chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486491|gb|AEA80896.1| chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Candidatus Pelagibacter sp.
IMCC9063]
Length = 292
Score = 152 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 109/295 (36%), Positives = 181/295 (61%), Gaps = 8/295 (2%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
NN+ + LG+GLAAL+GE E+ + + ++ H + PN PR F+ +
Sbjct: 4 NNFKSKGLGKGLAALLGESETKEPFIEQNFTS-----EKVATHLLKPNRFQPRKNFDKKQ 58
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L++L QSIK+ GIIQP++VR ++ ++IIAGERR+RAA++A L E+PV+ +VD+ +
Sbjct: 59 LDELAQSIKTRGIIQPIVVRPSNDNTFEIIAGERRWRAAQLAQLHEIPVVKLDVDDTLAA 118
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E A++EN+QR+ LN LEEA GY+ L+ ++GYTQ+ + ++GKSR+H+AN LR+ KLP +
Sbjct: 119 EFAVLENIQREGLNALEEADGYKLLMDKFGYTQDKLSEMIGKSRAHIANTLRLKKLPVEI 178
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++MI + ++ GHARTL+ S + LA+ IV+ +SVR E L + +
Sbjct: 179 QDMITQGILTPGHARTLIDVSGNVELAKTIVNNNLSVRQAEFLA--KKTHSSSIPNSDKS 236
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQLKIICSLLGEN 296
++ + L +L + + +K G+ ++I H+ G Y+ QL+ + + EN
Sbjct: 237 NKAIDPNLKELIEDLQNKTGMTVNISHKKKSGGTIGFHYKNLSQLEFLIKAVKEN 291
>gi|296167150|ref|ZP_06849557.1| plasmid partition ParA protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897472|gb|EFG77071.1| plasmid partition ParA protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 327
Score = 152 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 98/320 (30%), Positives = 160/320 (50%), Gaps = 28/320 (8%)
Query: 6 SKRRLGRGLAALIGEVNQSIDS--------------------PEKKTETIPESQDCISIH 45
K LGRGLA+LI DS P I+
Sbjct: 7 KKGGLGRGLASLIPTGPAEGDSGPATLGPRMGDAAADVLIGGPGPDLAPAGAVYREIAPA 66
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN----GLYKIIAGERRFRAA 101
I PNP PR F+ E L +L SI+ G++QP++VRA+ Y+I+ GERR+RAA
Sbjct: 67 DIEPNPRQPRQVFDDEALSELVHSIREFGLLQPIVVRAVPGAKTGPRYQIVMGERRWRAA 126
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
+ A L+ +P I+R + + L A++EN+ R LNPLEEA Y+QL+ E+G T +++ S
Sbjct: 127 QEAGLATIPTIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELASR 186
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS----TSDPLSLAQVIVSKKM 217
+G+SR + N++R+LKLP V+ + +S GHAR L+S LA IV++ +
Sbjct: 187 IGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASRIVAEGL 246
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
SVR TEE V + + L ++ +++S+ +++ KG+
Sbjct: 247 SVRATEEAVTLANRAGATTPAPQRRKPIQMPGLQEVAERLSNAFDTRVTVSLGKRKGKIV 306
Query: 278 IKYETNEQLKIICSLLGEND 297
+++ + + L+ I ++ +
Sbjct: 307 VEFGSVDDLQRIIDMMTPAN 326
>gi|78186211|ref|YP_374254.1| ParB-like partition protein [Chlorobium luteolum DSM 273]
gi|78166113|gb|ABB23211.1| chromosome segregation DNA-binding protein [Chlorobium luteolum DSM
273]
Length = 295
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 163/297 (54%), Gaps = 9/297 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD-CISIHSIVPNPHNPRNYFESEGL 63
+K LG+GL ALI E S ++ + + + + SI NP PR F+ L
Sbjct: 1 MAKNALGKGLKALIPEEGFSRAGRDEVDVPMQDGVIGSLPVESIHANPFQPRKEFDETAL 60
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSL 122
E+L SI +G+IQ + D Y++I+GERR RA + A +P + + S L
Sbjct: 61 EELMNSILENGVIQ-PVTVQRDGEGYQLISGERRLRAVRKAGYKFIPAYVIEARSDSSKL 119
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR+DLN +E AL + L ++ TQ+++ VGK+RS V+N LR+LKLP V
Sbjct: 120 ELALIENIQREDLNAIEVALALKSLTTKCSLTQDEVAKKVGKNRSSVSNFLRLLKLPLQV 179
Query: 183 REMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++ IR EIS GHAR L L + + +++ ++SVR TE LV + K
Sbjct: 180 QDSIRSREISFGHARALINLPGEQQQLRVWKQVIAHQLSVRQTEALVARMFREDGSADK- 238
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ E+E ++ +LE + +K+ + I+ + KG+ I+Y + + L+ I ++G+
Sbjct: 239 -KAKPEREPHVAELESLLRNKLATKVRIIEKKGGKGEIHIQYFSGDDLERILEIMGD 294
>gi|332800537|ref|YP_004462036.1| parB-like partition protein [Tepidanaerobacter sp. Re1]
gi|332698272|gb|AEE92729.1| parB-like partition protein [Tepidanaerobacter sp. Re1]
Length = 283
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 105/294 (35%), Positives = 179/294 (60%), Gaps = 14/294 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SKR LGRGL ALI + + E+ I I +IV N PR F+ + L+
Sbjct: 1 MSKRGLGRGLEALIP--------MDSMEQKDGENVQEIDIKAIVANDKQPRKDFDEQKLD 52
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L S+K HG++QP+IVR +Y+++AGERR+RAA A + ++P I++ + + +EI
Sbjct: 53 ELAASMKQHGVLQPVIVRKKG-NIYELVAGERRWRAAAKAGIKKIPAIVKELSDADVMEI 111
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEAL Y+ L+ ++G TQ ++ VGKSRS +AN +R+L L S ++E
Sbjct: 112 ALIENLQREDLNPMEEALAYKTLMDDFGLTQEELSKRVGKSRSQIANTVRLLNLESEIQE 171
Query: 185 MIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ +++++ GHAR L+S D LA+ I S +SVR TE++ ++ + E + K
Sbjct: 172 LVLQDKLTAGHARALLSIQDKKCRYDLAKKISSDALSVRQTEQMAKKISD--ENKHKNNT 229
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+E + D+ +K+ +G + IK +G+ I++ + ++L+ I ++ E
Sbjct: 230 RQKEINPVILDITEKLQRSLGTRVRIKGNERRGKIEIEFYSGDELERILEVITE 283
>gi|296445005|ref|ZP_06886966.1| parB-like partition protein [Methylosinus trichosporium OB3b]
gi|296257426|gb|EFH04492.1| parB-like partition protein [Methylosinus trichosporium OB3b]
Length = 289
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 130/295 (44%), Positives = 186/295 (63%), Gaps = 10/295 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + RLGRGLAALIGE + E+ Q + I + PNP NPR F
Sbjct: 1 MAEEV-RTRLGRGLAALIGEAGDETPAVERA-----RGQRKVPIEFLRPNPRNPRVAFGE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ L DL SI+ GIIQP++VR + Y+IIAGERR+RAA++A+LS+VPV++ D+
Sbjct: 55 DDLADLAASIREKGIIQPILVRTVPGVADAYEIIAGERRWRAAQLANLSDVPVLVHEADD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +LE+AI+ENVQR DLN +EEA GYE+L E+GY+Q ++ I+GKSRSHVAN +R+L L
Sbjct: 115 REALELAIIENVQRADLNAIEEARGYERLSGEFGYSQTELARIIGKSRSHVANTIRLLNL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P + R ++ IS GHAR L++ DP ++A+ +V+ +SVRD E+L Q + K
Sbjct: 175 PEATRRLVSDGAISAGHARALLAVEDPDAVARKVVADGLSVRDVEQLAQRESG--ATEAK 232
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ EK+ +EK ++ +GLN+SI+HR G I+Y T EQL +C L
Sbjct: 233 PRKSRVEKDADTIAIEKMLTDALGLNVSIQHRGESGDLRIRYTTLEQLDGLCRRL 287
>gi|153206149|ref|ZP_01945412.1| ParB-like partition protein [Coxiella burnetii 'MSU Goat Q177']
gi|165918755|ref|ZP_02218841.1| ParB-like partition protein [Coxiella burnetii RSA 334]
gi|120577279|gb|EAX33903.1| ParB-like partition protein [Coxiella burnetii 'MSU Goat Q177']
gi|165917583|gb|EDR36187.1| ParB-like partition protein [Coxiella burnetii RSA 334]
Length = 288
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 165/290 (56%), Gaps = 9/290 (3%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
KR LGRGL+ L G + + ++I I P + PR + + LE+L
Sbjct: 4 KRGLGRGLSDL-GLNELLTEINDASLADSKTELKKLTIDVIQPGRYQPRRQMDKDALEEL 62
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SI++ GIIQP++VR + Y+IIAGERR+RAA++A L EVP +IR + +++++ +++
Sbjct: 63 ANSIRAQGIIQPIVVRPVGQR-YEIIAGERRWRAAQLAGLKEVPAVIRPITDEAAIAMSL 121
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR++LN +EEA ++L+ E+ T +I VGKSR+ V N LR+LKL V+ ++
Sbjct: 122 IENIQRQNLNAIEEAAALQRLLDEFKMTHEEIAEAVGKSRTSVTNSLRLLKLNPDVKALL 181
Query: 187 RKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ + +GHAR L + A +I+ + +SVR+TE+L+ + K
Sbjct: 182 EQGHLDMGHARALLALEGFQQSEAANIIIKRALSVRETEKLI----QHWQSEGKSSANRP 237
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + L+ +S K+G ++I+H KG+ I Y + ++L+ I +
Sbjct: 238 SMDPDVARLQHHLSDKLGSAVTIRHGAKGKGKLIIHYNSADELEGILDRI 287
>gi|16081148|ref|NP_391976.1| site-specific DNA-binding protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312079|ref|ZP_03593926.1| site-specific DNA-binding protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316404|ref|ZP_03598209.1| site-specific DNA-binding protein [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221321317|ref|ZP_03602611.1| site-specific DNA-binding protein [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325600|ref|ZP_03606894.1| site-specific DNA-binding protein [Bacillus subtilis subsp.
subtilis str. SMY]
gi|586016|sp|P26497|SP0J_BACSU RecName: Full=Stage 0 sporulation protein J
gi|40031|emb|CAA44409.1| spoOJ93 [Bacillus subtilis]
gi|467380|dbj|BAA05226.1| stage 0 sporultion [Bacillus subtilis]
gi|2636643|emb|CAB16133.1| site-specific DNA-binding protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|291486734|dbj|BAI87809.1| site-specific DNA-binding protein [Bacillus subtilis subsp. natto
BEST195]
Length = 282
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 101/291 (34%), Positives = 161/291 (55%), Gaps = 13/291 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL + + E+ + I I + PNP+ PR +F+ E L +L
Sbjct: 3 KGLGKGINALF-----------NQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELK 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+S+ HGI+QPLIVR Y I+AGERRFRAAK+A L VP I+R + EIA++
Sbjct: 52 ESVLQHGILQPLIVRK-SLKGYDIVAGERRFRAAKLAGLDTVPAIVRELSEALMREIALL 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ TQ + +GKSR H+AN LR+L LP +++++I
Sbjct: 111 ENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLTLPENIQQLIA 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN-KKEKRKKIFEGSREK 246
+ +S+GH RTL+ + L ++ + +L Q + ++ + K
Sbjct: 171 EGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVK 230
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ L + E + + G ++IK + KG+ I++ +NE L I LL E +
Sbjct: 231 DAVLKERESYLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERE 281
>gi|227529769|ref|ZP_03959818.1| stage 0 DNA-binding protein [Lactobacillus vaginalis ATCC 49540]
gi|227350253|gb|EEJ40544.1| stage 0 DNA-binding protein [Lactobacillus vaginalis ATCC 49540]
Length = 295
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 168/301 (55%), Gaps = 17/301 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRG+ AL + + E+ + + I PNP+ PR F+
Sbjct: 1 MAKN-KQSGLGRGIEALF-------EENDFNEINDNETVQDVKLSLIRPNPYQPRRTFDQ 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ L +L SI+ G+ QP+I+R D Y++IAGERRFRA+K+A + +P IIR + +
Sbjct: 53 KALRELASSIQESGVFQPIILRQPDPKLKRYELIAGERRFRASKLAKQTTIPAIIRTMSD 112
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +E+A++EN+QR+DL PLEEA Y+ L+ + TQ + +GKSR ++AN LR+L L
Sbjct: 113 EKMMEVAVLENLQREDLTPLEEAQAYQTLMDKLSLTQAQVAERLGKSRPYIANYLRLLGL 172
Query: 179 PSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P+ ++E++ ++S+G ART L + LA+ V K ++VR EELV + +
Sbjct: 173 PNEIKELVSAGKLSMGQARTLLGLKDRKQLVKLAKQAVEKNLTVRQLEELVAQMNG--TA 230
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISI--KHRNNKGQFCIKYETNEQLKIICSLL 293
KK + + K Y+ + E ++ SK G +++ + N G+ I Y + + I +L
Sbjct: 231 EKKRAKRRQRKPAYVREAESQLQSKFGTKVAVAPSRKKNAGKIEIPYTSADDFNRILEVL 290
Query: 294 G 294
Sbjct: 291 N 291
>gi|114705864|ref|ZP_01438767.1| chromosome partitioning protein, ParB [Fulvimarina pelagi HTCC2506]
gi|114538710|gb|EAU41831.1| chromosome partitioning protein, ParB [Fulvimarina pelagi HTCC2506]
Length = 327
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 125/307 (40%), Positives = 194/307 (63%), Gaps = 13/307 (4%)
Query: 1 MSNNYSKRRLGRGLAALIG--EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS + S++RLGRGLAALIG E + ++ E + + +++ NP+NPR F
Sbjct: 18 MSEDRSRQRLGRGLAALIGGGETHGGFQPRQRDREEAVRPDRQVPLEAVLANPNNPRRTF 77
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ DL QS+K HGI+QPL+VR + ++I+AGERRFRAAK A L ++PV++R++
Sbjct: 78 SEADIADLAQSVKKHGIVQPLLVRPNPDRPETFEIVAGERRFRAAKAAGLEKIPVVVRDI 137
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D++ S+EIA++ENVQR DLN +EEAL YE+LI E+GYTQ D+ + KSRSHVAN+LR+L
Sbjct: 138 DDRQSIEIALIENVQRTDLNAIEEALAYERLIDEHGYTQADLAEALAKSRSHVANMLRLL 197
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQ--------- 227
LP VR+M+ ++S G ARTL+ + DP ++A++IV +SVR+ EEL +
Sbjct: 198 NLPDVVRKMVVDGDLSAGAARTLIGSDDPETVARLIVKDGLSVREAEELARSTGAANSGE 257
Query: 228 EQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLK 287
++ E R + ++E++++ + +N+++K + +KG I Y + E+L
Sbjct: 258 GVNDLGEGSGTSAARKRTPSAEMAEIEQRLADHLAMNVALKGKPSKGSLKIDYRSAEELS 317
Query: 288 IICSLLG 294
I LG
Sbjct: 318 HILQRLG 324
>gi|260550092|ref|ZP_05824306.1| chromosome partitioning protein parB [Acinetobacter sp. RUH2624]
gi|260406847|gb|EEX00326.1| chromosome partitioning protein parB [Acinetobacter sp. RUH2624]
Length = 295
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 180/299 (60%), Gaps = 15/299 (5%)
Query: 1 MSNNYSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR L GRGL AL+G + + E + I ++ + + PR +
Sbjct: 1 MS--IKKRGLAKGRGLDALLGSIQKEKLQLEAQA-LDHGQLKQIDVNLLKRGEYQPRRFI 57
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI+ HG++QP+++R +D+ Y+IIAGERR+RAA++A L+E+P I+R++
Sbjct: 58 HEHDLQELASSIEKHGVMQPIVIRPVDDEAHPYEIIAGERRWRAAQIAGLTEIPAIVRDL 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+++ ++ +A++EN+QR+DLNP+++AL ++ E+G + +I VGK+R+ V+N+LR+L
Sbjct: 118 NDQVAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIADTVGKARTTVSNLLRLL 177
Query: 177 KLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L ++E +++ ++ +GHAR ++ + L +A++++ K +SVR TE+LV++ +
Sbjct: 178 SLADDIKEFMQQGQLDMGHARAILTLKGKEQLEVAKIVIEKGLSVRQTEQLVRDWNE--- 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
K + + L +K+S + G N+ I H KG+ I Y + ++L I ++
Sbjct: 235 --PKQEKEKTPVAPDIEQLTQKLSERFGANVKIDHNQKGKGKLVIHYHSLDELDGILNI 291
>gi|226941922|ref|YP_002796996.1| parB-like partition protein [Laribacter hongkongensis HLHK9]
gi|226716849|gb|ACO75987.1| parB-like partition protein [Laribacter hongkongensis HLHK9]
Length = 287
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 97/297 (32%), Positives = 170/297 (57%), Gaps = 17/297 (5%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
MS + K + LGRGL L+ + + I I P + PR + +
Sbjct: 1 MSVSKQKPKGLGRGLDVLL------------AAHHTEDRLATLKISDIRPGRYQPRTHMD 48
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L L SI + G+IQP++VR I G Y++IAGERR+RAA+ A L+E+P ++R V ++
Sbjct: 49 EAALAQLADSILAQGVIQPVVVREIGLGEYELIAGERRWRAARKAGLTEIPAVVRAVPDE 108
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++L IA++EN+QR+ LN LEEA G ++LI E+G T + +G+SRS V+N+LR+L L
Sbjct: 109 AALAIALIENIQREQLNALEEAHGIQRLIDEFGMTHERAAAALGRSRSAVSNLLRLLHLA 168
Query: 180 SSVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V++++ ++ +GHAR L+ D + +A+ I + +SVR+ E Q + ++
Sbjct: 169 EPVQDLVYAGKLDMGHARALLPLPVLDQIDMARDIADRGLSVREAERRAQARLSESSAPV 228
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ G R+ + + L+++++ ++G+ + I+H +G+ I+Y +QL + L
Sbjct: 229 PV-AGGRKVDPDVARLQEELADRLGVAVKIRHGSKGRGRLEIEYLDLDQLDRFLAAL 284
>gi|227432680|ref|ZP_03914653.1| stage 0 DNA-binding protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351562|gb|EEJ41815.1| stage 0 DNA-binding protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 299
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 165/297 (55%), Gaps = 15/297 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPE-----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
K LG+G+ +L G N S ++ E K + E + + I PNP PR++F+
Sbjct: 4 KKGGLGKGMNSLFGANNVSKEAVEHTKVVTKEQEATEQVVKLPLKDIQPNPFQPRHHFDE 63
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI +G++ P+IVR I ++IIAGERR RA+K++ L + I+R+VD+ +
Sbjct: 64 SKLKELSASITENGVLTPIIVRQIGQK-FEIIAGERRVRASKLSGLKSISAIVRHVDDDT 122
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+A++EN+QR DL+ +EEA ++ L++ TQ ++ VGK R+ VAN+LR+LKLP
Sbjct: 123 MAALALIENLQRDDLDAIEEAQAFDALMTRLQMTQAEVAEKVGKDRATVANLLRLLKLPE 182
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
SV+ +I+ E+S+G AR L +A+ +V + ++VR E LV++ +
Sbjct: 183 SVQVLIQDGELSMGQARALLGLKKKPQIEKVAETVVFRGLNVRQVENLVRQMNEGV---- 238
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
++E + L ++ K G + + R G+ I Y +NE L I +LL
Sbjct: 239 -PEPNTKEILPFAVSLSNQLEEKFGTKVKVNAGRKGNGKIEINYVSNEDLSRILALL 294
>gi|114565203|ref|YP_752717.1| parB-like partition proteins [Shewanella frigidimarina NCIMB 400]
gi|114336496|gb|ABI73878.1| chromosome segregation DNA-binding protein [Shewanella
frigidimarina NCIMB 400]
Length = 293
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 172/294 (58%), Gaps = 11/294 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSI---DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
KR LG+GL AL+ N + D E++ + + + P + PR E
Sbjct: 4 KKRGLGKGLDALLSHSNTASRKNDQAEEQQSASLNDLLHLDLDLLQPGKYQPRKDMSPEA 63
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
LE+L +SI++ G+IQP+++R I Y+IIAGERR+RAA++A L +VP I++ V + +++
Sbjct: 64 LEELAESIRAQGVIQPIVIRKISATNYEIIAGERRWRAAQLAKLDKVPCIVKQVADDAAV 123
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
IA++EN+QR+DLN +EEA+ ++L+ E+ T + VGKSR V+N+LR+ L V
Sbjct: 124 AIALIENIQREDLNAMEEAIALQRLLEEFELTHQQVADAVGKSRVSVSNLLRLNSLNEPV 183
Query: 183 REMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ ++ +I +GHAR L V + +LA+++ SK+M+VR+TE LV + N
Sbjct: 184 KRLLENGDIDMGHARALLAVEGDEQTNLARLVASKEMTVRETERLVNKALN-----PAKD 238
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ K+ ++ LE+++ ++G ++I H KG+ I Y+ +L I S +
Sbjct: 239 AETPAKDHDVSRLEQELIERLGAKVAINHGSKGKGKIVINYQNLAELDGILSKI 292
>gi|315187329|gb|EFU21085.1| parB-like partition protein [Spirochaeta thermophila DSM 6578]
Length = 287
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 158/292 (54%), Gaps = 12/292 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+KR LG+G+ AL+G + S + + +VP PR +F+ LE
Sbjct: 1 MAKRGLGKGIDALLGGGLDFSEEE--------GSLREVEVERLVPQEGQPRKHFDEAALE 52
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
DL +SIK G++QPL+V + G ++I+AGERR+RAAK+A + VPVI+R+ + LEI
Sbjct: 53 DLARSIKEKGVLQPLLVEELPGGKFRIVAGERRYRAAKLAGRTTVPVIVRSFTEQERLEI 112
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DL P+EEA Y L+ G TQ + +GKSR +AN LR+L+LP ++
Sbjct: 113 ALIENIQREDLTPIEEAQAYRALMEHAGLTQEQLAERLGKSRPVIANALRLLQLPEEMQR 172
Query: 185 MIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ + I+ GHAR ++ L IV + +SVR+ E +K
Sbjct: 173 ALDERTITPGHARAILSVPDDEGRRRLFSQIVKEGLSVREAERRAARVAG-DAAGRKTPA 231
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
R ++ +L DLE + ++G + IK +G I Y + + L+ + +L
Sbjct: 232 DERARDPFLRDLEDRCIERLGTKVRIKGSLERGVVEIAYFSKDDLERLIEVL 283
>gi|171914121|ref|ZP_02929591.1| predicted Transcriptional regulator [Verrucomicrobium spinosum DSM
4136]
Length = 304
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 175/303 (57%), Gaps = 8/303 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDS----PEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+K LG+GL ALIG+ + P E+ + + +VP+P PR F
Sbjct: 1 MAKAALGKGLGALIGKAGTPPPAGNSMPFTPQPAPGETVRKVPLDEVVPSPLQPRKEFAP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L SI+ HGIIQPLIVR + N +++IAGERR+RA++ LSEVPVI+R +K
Sbjct: 61 EQLHELMDSIREHGIIQPLIVRLVANK-FELIAGERRWRASRELGLSEVPVIVRTASDKD 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A++EN+QR++LNP+EEA Y +L E+ Q DI VGK+R+ VAN +R+L+LP+
Sbjct: 120 VLEMALIENLQRENLNPVEEAQAYVRLSKEFNLRQEDIAQRVGKNRATVANAIRLLELPA 179
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ + +R+ ++ GHA+ + S D + +++ K +SVR TE+L++ N +
Sbjct: 180 ASLQQLREGRLTPGHAKVVLGLKSADDMEAACAMVLEKGLSVRATEKLIESILNPPVPKA 239
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
K E + L +E++++ + S+ H KG+ + Y E L + +L+G +
Sbjct: 240 KPASPDAELKIALQAVEQRLTRHFSTSASVHHGEKKGRLELDYYGVEDLNRLLALMGVEE 299
Query: 298 FEY 300
++
Sbjct: 300 ADF 302
>gi|158521643|ref|YP_001529513.1| parB-like partition protein [Desulfococcus oleovorans Hxd3]
gi|158510469|gb|ABW67436.1| parB-like partition protein [Desulfococcus oleovorans Hxd3]
Length = 305
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 158/296 (53%), Gaps = 14/296 (4%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
KR LGRGL AL E++ + + + I N PR+ F E
Sbjct: 16 EPKKKRALGRGLDALFPEMS--------RADAAGGDYFYCDLDVISSNRFQPRSRFSEEE 67
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L L +SIK G+IQP+IVR D G Y+++AGERR RAA++A LS+VPV++R++ ++ L
Sbjct: 68 LAALAESIKKEGVIQPVIVRKTDTG-YELVAGERRLRAARLAGLSQVPVVVRDISDQQHL 126
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
+IVENVQR+DLNPLEEA GY L++ +G++Q ++ + VGK+RS VAN+LR+ LP +
Sbjct: 127 VYSIVENVQREDLNPLEEAQGYHMLVNTFGFSQEEVAAAVGKNRSTVANMLRLRNLPDPI 186
Query: 183 REMIRKEEISLGHARTL-----VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+E I IS GHAR L + + A + + + ++
Sbjct: 187 KERITDGSISTGHARALLAAKTPQQQNTIFQAILAKGLSVRQAEAMVKAPDKAGSSSSAG 246
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + + + D+ + ++ G + I+ + +G+ I++ ++ L + LL
Sbjct: 247 PLKKPAPADAAHFADMTESLARIFGTRVRIQRKGKRGKIEIEFYSDADLDRVLELL 302
>gi|90409266|ref|ZP_01217368.1| Chromosome partitioning protein ParB [Psychromonas sp. CNPT3]
gi|90309626|gb|EAS37809.1| Chromosome partitioning protein ParB [Psychromonas sp. CNPT3]
Length = 303
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 164/299 (54%), Gaps = 11/299 (3%)
Query: 7 KRRLGRGLAALIGEVNQS----------IDSPEKKTETIPESQDCISIHSIVPNPHNPRN 56
KR LG+GL +L+ N S + +K E+ I+I + + PR
Sbjct: 5 KRGLGKGLDSLLSSSNISRSKQVSHDVQAEKTQKIVESTQGELQNINIDLLQAGKYQPRR 64
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ +E LE+L SI + GIIQPL+VR + Y+IIAGERR+RAAK+ L +P +++NV
Sbjct: 65 HMCTEKLEELASSIHAQGIIQPLVVRLTGHQNYEIIAGERRWRAAKIVGLESIPCLVKNV 124
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ +++ IA++EN+QR+DLN +EEA+ Y++L+ E+ T D+ VGKSR+ V+N+LR+
Sbjct: 125 QDNAAIAIALIENIQREDLNAMEEAIAYKRLLEEFTLTHQDVAVAVGKSRTAVSNLLRLN 184
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
L V++M+ +I +GHAR L+S D + + ++ E + + K
Sbjct: 185 NLSMPVQKMLANGDIEMGHARALLSCDDERQASLAFMVIDKNLTVRETERLVKQSSDPKV 244
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
K + + + + + +SSK+G + +N G+ I ++ ++L I +LL
Sbjct: 245 PKSTPKLLKTDPKIQAISETLSSKLGTPVVFSQAKNGSGKIVISFDKTDKLNDILALLK 303
>gi|86143208|ref|ZP_01061610.1| putative ParB-like chromosome partitioning protein
[Leeuwenhoekiella blandensis MED217]
gi|85830113|gb|EAQ48573.1| putative ParB-like chromosome partitioning protein
[Leeuwenhoekiella blandensis MED217]
Length = 301
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 175/302 (57%), Gaps = 6/302 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP-EKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + + I + +K + + + + + +I NP PR+ F
Sbjct: 1 MAKAVKKQALGRGLSALLKDPDNDIKTAGDKGADKVVGNIVELELANIEVNPFQPRSSFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ L++L SI+ G+IQP+ VR I+ G Y++++GERRFRA+K+ L +P IR +++
Sbjct: 61 EDALKELASSIRELGVIQPITVRKIEFGKYQLVSGERRFRASKLVGLETIPAYIRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E AL YE+LI E TQ + VGK+RS +AN LR+LKL
Sbjct: 121 ESLEMALVENIQREDLDPIEIALSYERLIEEINLTQEQMSERVGKNRSTIANYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+ +R +S+GH R L++ + + I+ +SVR TE LV+ K+
Sbjct: 181 PIVQTGMRDGFLSMGHGRALINIENTSDQLDIYEKILQDSLSVRATEALVKNYKEGKKSG 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
K S+ + ++ + +K+ +S G + +K + G+ I + + E K + L+
Sbjct: 241 KSTPVKSKVPD-FIQEGKKEFASYFGAKVDVKVAQKGNGKLIIPFSSEEDFKRLKKLISG 299
Query: 296 ND 297
+
Sbjct: 300 AE 301
>gi|330831713|ref|YP_004394665.1| chromosome partitioning protein ParB [Aeromonas veronii B565]
gi|328806849|gb|AEB52048.1| Chromosome partitioning protein ParB [Aeromonas veronii B565]
Length = 300
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 91/296 (30%), Positives = 164/296 (55%), Gaps = 16/296 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSID--------SPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
KR LG+GL AL+ + + E T + + + + PR
Sbjct: 4 KKRGLGKGLDALLSTSTAARQKQVMSDQRTEEAMAPTNQGELRKLPVEWLQSGKYQPRKD 63
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ LE+L SI++ G+IQP++VR + ++IIAGERR+RA+++A L VP I+++V
Sbjct: 64 MSQDALEELANSIRAQGVIQPIVVRPLGEQSFEIIAGERRWRASQLARLEVVPCIVKDVP 123
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+++++ IA++EN+QR+DLN +EEA+ ++L++E+ T + VGKSR+ V N+LR+ +
Sbjct: 124 DEAAVAIALIENIQREDLNAIEEAVALQRLLTEFELTHQQVAEAVGKSRTTVTNLLRLNQ 183
Query: 178 LPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L V+ + ++ +GHAR L +S LA+++ K ++VRDTE+LVQ+
Sbjct: 184 LNDDVKRFVEHGDLDMGHARALLALSGQAQSELAKLVAQKGLTVRDTEKLVQKALE---- 239
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC 290
++ + LE++++ K+G + ++ + + G+ I YE L I
Sbjct: 240 -PAKARVEPARDPQIGYLERQLAEKIGNQVQLQPGKRDSGKLVISYENLSDLDRIL 294
>gi|320109305|ref|YP_004184895.1| parB-like partition protein [Terriglobus saanensis SP1PR4]
gi|319927826|gb|ADV84901.1| parB-like partition protein [Terriglobus saanensis SP1PR4]
Length = 302
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 93/302 (30%), Positives = 167/302 (55%), Gaps = 7/302 (2%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQSIDS--PEKKTETIPESQDCISIHSIVPNPHNPRN 56
MS +R LG+GL +L+ + P + + + IVP+ R
Sbjct: 1 MSAAAVDKRRALGKGLESLLPSKPTPPPAVLPTLQAAEDTGKPKELRVDQIVPSRFQTRM 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
F+ L++L QSI + G++QP++VR + +G Y++IAGERR+RA+KMA +P ++R
Sbjct: 61 RFDEAELKELAQSIAATGVVQPVVVRRMTDGRYELIAGERRWRASKMAGKETIPAVVRQA 120
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++ ++E+ IVEN+QR DLNP+E+A +++L E+ TQ I GK R+ VAN LR+L
Sbjct: 121 SDEQAMEMTIVENLQRSDLNPMEQARAFDRLGREFALTQEQIAVRTGKERASVANFLRLL 180
Query: 177 KLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
+LP V++ + E+S GHA+TL+ + + + A+ +++ MSVR TE ++ + +
Sbjct: 181 RLPPEVQDKVEAGELSFGHAKTLLALENEAQMAAAAKKVLALSMSVRQTETYIKGLLDPE 240
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K K+ + + + + + +GL + I+ +N +G+ I+Y + +L
Sbjct: 241 RKLGKVEPPPEVIDPNVREAQVALQRALGLKVRIEDKNGRGRVVIEYSRLTDFDTLFEML 300
Query: 294 GE 295
+
Sbjct: 301 TK 302
>gi|323705837|ref|ZP_08117409.1| parB-like partition protein [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534833|gb|EGB24612.1| parB-like partition protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 279
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 117/296 (39%), Positives = 176/296 (59%), Gaps = 23/296 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+N KR LGRGL ALI E++ E + + I I I PN PR +F+
Sbjct: 1 MNN---KRGLGRGLQALIPEID----------EESAKGVENIKISDIEPNQFQPRKHFDD 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK HGIIQP+IVR D G Y+I+AGERR+RAAK+A L EVP I+++ D++
Sbjct: 48 ESLKELSDSIKEHGIIQPIIVRRNDFG-YQIVAGERRWRAAKLAGLKEVPAIVKDFDDQK 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DLNP++EA Y+ L+ ++ TQ +I VGKSRS +AN +R+L L
Sbjct: 107 VMEIALIENLQREDLNPIDEAKAYKSLMEQFNLTQEEISKRVGKSRSSIANSIRLLNLDE 166
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M+ + +I+ GHA+ + +A+ IV K ++VRDTE L++E
Sbjct: 167 EVQNMLMEGKITTGHAKVILALQDAEKQNMIAKKIVDKNLNVRDTENLIKE------VTS 220
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +E + Y+ ++E G + I H NKG+ I+Y + E L + L+
Sbjct: 221 SKKKKRKESDAYIKEIEDNFCRFFGTKVKIIHGKNKGKILIEYYSEEDLSRLTELI 276
>gi|163732967|ref|ZP_02140411.1| chromosome partitioning protein parB [Roseobacter litoralis Och
149]
gi|161393502|gb|EDQ17827.1| chromosome partitioning protein parB [Roseobacter litoralis Och
149]
Length = 279
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 115/279 (41%), Positives = 168/279 (60%), Gaps = 3/279 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
++ ++ P S I I I PNP PR FE L+DL SIK G+IQPLI
Sbjct: 1 MSDVAEAETAAGPGAPGSNQKIPIDQISPNPDQPRKLFEDRDLDDLTASIKEKGVIQPLI 60
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR ++I+AGERR+RAA+ A L E+PV++R + LE+AI+EN+QR DLNP+EE
Sbjct: 61 VRKTGADQFEIVAGERRWRAAQRAQLHELPVVVREFTDVEVLEVAIIENIQRADLNPIEE 120
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A GY QL+ +G+TQ + +GKSRSH+AN+LR+L LP +V +M+R+ +S GHAR L+
Sbjct: 121 AAGYRQLMDRFGHTQEKMAEALGKSRSHIANLLRLLGLPEAVLQMVRQGALSAGHARALI 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELV-QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS 259
DPL LAQ IV +SVR E LV +E+ E + + EK+ LE +S+
Sbjct: 181 PAQDPLKLAQQIVKGGLSVRAAEALVKKERSGPAETPRAAASPTPEKDADTKALEGDLSA 240
Query: 260 KVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLGEN 296
+G+ + + H+ GQ + Y++ + L +C +LG +
Sbjct: 241 NLGMKVELSHKPGAESGQMTLHYKSLDDLDELCRILGGS 279
>gi|189463190|ref|ZP_03011975.1| hypothetical protein BACCOP_03903 [Bacteroides coprocola DSM 17136]
gi|189430169|gb|EDU99153.1| hypothetical protein BACCOP_03903 [Bacteroides coprocola DSM 17136]
Length = 299
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 15/302 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL ALI + ++ + S + + + I NP+ PR F+
Sbjct: 1 MAV-QKKFALGRGLDALIS-------TNDEVKTSGSSSINEVELSKISVNPNQPRREFDP 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R ++ Y+IIAGERR+RA+ A L +P IR D+++
Sbjct: 53 IALQELADSIAEIGIIQPITLRKLNEDSYQIIAGERRYRASIQAGLKTIPAYIRTADDEN 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN LE AL Y+ LI +Y TQ + VGK R+ +AN LR+LKLP+
Sbjct: 113 VMEMALIENIQREDLNSLEIALAYQHLIEQYELTQERLSERVGKKRTTIANYLRLLKLPA 172
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIV------SKKMSVRDTEELVQEQDNKKE 234
++ ++ +EI +GHAR L++ DP + ++ V + + + ++ +
Sbjct: 173 PIQVALKNKEIDMGHARALLALDDPKTQIRIFNEIITQGYSVRKVEEIVKALSAGESVES 232
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
KKI + + T L+ + + G + + KG+ I + L+ I +L
Sbjct: 233 GGKKIAPKGAKLSEEYTMLQNHLCTFFGTKVQLSCSNKGKGKISIPFSNEADLERIMEIL 292
Query: 294 GE 295
Sbjct: 293 DS 294
>gi|326793310|ref|YP_004311131.1| parB-like partition protein [Clostridium lentocellum DSM 5427]
gi|326544074|gb|ADZ85933.1| parB-like partition protein [Clostridium lentocellum DSM 5427]
Length = 289
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 167/294 (56%), Gaps = 9/294 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+R LGRGL AL+ + +I + + T + I+ I PN PR F E L+
Sbjct: 2 KPQRGLGRGLNALLSDEALNITAEGEAT------IKIVDINDIEPNFGQPRKKFSEEELQ 55
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSI +G+IQPLIVR N Y+I+AGERR+RAA++A L+E+P+II+ ++ +LE+
Sbjct: 56 ELSQSILEYGVIQPLIVRE-KNNKYEIVAGERRYRAARLAGLTELPIIIKLFSDQQTLEV 114
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+E A Y L+ + TQ + VGKSR+ V NI+R+LKL V+E
Sbjct: 115 ALIENIQREDLNPMELACAYSLLMEHFDLTQEQVADKVGKSRTAVTNIMRLLKLTPYVQE 174
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+R++ IS GHAR +++ D Q+ E+ + N + K +
Sbjct: 175 KLREDAISYGHARAILAVKDIKLQKQLTDLVIEKQLSVREIEKYIQNLSSIKDKKKKDKE 234
Query: 245 EK--EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
++ + ++++ + +G ++I KG+ I+Y ++E+L I ++ N
Sbjct: 235 KELYNPFYREIQEDLQRVLGTRVAISKGAKKGKIEIEYYSDEELSRIIQIINAN 288
>gi|291537001|emb|CBL10113.1| ParB-like partition proteins [Roseburia intestinalis M50/1]
Length = 308
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 179/302 (59%), Gaps = 11/302 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDC-----ISIHSIVPNPHNPRN 56
S KR LG+G+ +LI + E ++ ++I+ + PN PR
Sbjct: 4 SMATKKRGLGQGIDSLIPNKVNANKETETVKVNAGSEKNETDGIFVNINKVEPNREQPRK 63
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
F+ + L DL +SIK G++QPL+V Y+IIAGERR+RAAK+A L EVPV I N+
Sbjct: 64 NFDEDSLVDLSESIKQVGVLQPLLV-LDKKDYYEIIAGERRWRAAKLAGLKEVPVRIMNL 122
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++ +EI++VEN+QR++LNP+EEA Y++L++E+ Q+++ V KSR+ V N +R+L
Sbjct: 123 TDQEVVEISLVENIQRENLNPIEEAFAYKRLLTEFHLKQDEVAERVSKSRTAVTNSMRLL 182
Query: 177 KLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
KL V++M+ + I+ GHAR L+ + AQ I + +SVR+TE+LV++ N K
Sbjct: 183 KLDERVQQMVIDDMITTGHARALLGIEDVEKQFATAQKIFDENLSVRETEKLVKKIQNNK 242
Query: 234 EKRKKIFEGS-REKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICS 291
+ + + S E DLE+K+ S +G ++I +++ KG+ I+Y + ++L I
Sbjct: 243 DIPVEKKKVSDPAMEAIYHDLEEKMKSILGTKVAINKKDDQKGKIEIEYYSMDELDRIID 302
Query: 292 LL 293
L+
Sbjct: 303 LI 304
>gi|116490231|ref|YP_809775.1| chromosome segregation DNA-binding protein [Oenococcus oeni PSU-1]
gi|290889613|ref|ZP_06552703.1| hypothetical protein AWRIB429_0093 [Oenococcus oeni AWRIB429]
gi|116090956|gb|ABJ56110.1| chromosome segregation DNA-binding protein [Oenococcus oeni PSU-1]
gi|290480811|gb|EFD89445.1| hypothetical protein AWRIB429_0093 [Oenococcus oeni AWRIB429]
Length = 295
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 112/303 (36%), Positives = 177/303 (58%), Gaps = 17/303 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRN 56
M+N KR LGRG+ AL + ++ + S IS+ S+ NP+ PR
Sbjct: 1 MAN---KRGLGRGIDALFSDEEDKKEAQVVEKVAPKKDDRNSVSTISLSSLKVNPYQPRK 57
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
F+ L +L +S+K G+IQPLIVRA Y+I+AGERRFRAAK+A L+EVPVI++++
Sbjct: 58 TFDEASLSELAESLKQSGVIQPLIVRAHG-KNYQIVAGERRFRAAKLAKLTEVPVIVKDL 116
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ + +E+AI+EN+QR+DLNP+EEA G + E TQ + +GKSR+ VAN LR+L
Sbjct: 117 SDSAMMELAIIENLQREDLNPIEEAQGINSYMKELALTQAQVAEKLGKSRAGVANTLRLL 176
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKK 233
LP+ V++++ ++S+GHAR L+ + A IV + +SVR EELV+ +
Sbjct: 177 NLPTEVQQLMIDGKLSMGHARALLGLDSQPDMLLLAHRIVKEGLSVRQVEELVR--KSAN 234
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++K +GS+ Y ++E ++ K +S+ + + I + ++L I +LL
Sbjct: 235 PEKKSSNQGSKSTNIYAEEVEHQLEDKFSTKVSLSKK----KIEINFANEDELDRILTLL 290
Query: 294 GEN 296
G N
Sbjct: 291 GVN 293
>gi|327438172|dbj|BAK14537.1| predicted transcriptional regulator [Solibacillus silvestris
StLB046]
Length = 281
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 167/290 (57%), Gaps = 18/290 (6%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL E + + I++ I+ NP PR F+ +E+L
Sbjct: 3 KGLGKGIDALFREEAVHKE----------DQVQQIAVGKILANPFQPRKIFDETAIEELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SI HGIIQP++VR Y+I+AGERR+RAA A L+EVPVI+++ + + +E+AI+
Sbjct: 53 SSIHEHGIIQPIVVRKNGRK-YEIVAGERRYRAAVSAGLTEVPVIVKDFNEQQMMEVAIL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL P+EEA Y LI + +TQ+D+ +GKSR H+AN++R+L+LP +R+++
Sbjct: 112 ENLQREDLTPIEEAEAYNSLIVKLNFTQDDLAKRLGKSRPHIANLIRLLQLPEDIRDLVN 171
Query: 188 KEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ ++++GH R L + +AQ ++ ++VR E+ +Q+ + + K +
Sbjct: 172 EGKLTMGHGRALLGLKNKRRIPEVAQKVIKDHLNVRQLEKYIQDLNEAVSRETKPTK--- 228
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
K+ + E ++ G + IK NKG+ I++ +++ L I +L
Sbjct: 229 -KDIHTQATESQLRDYFGTQVQIKKAKNKGKIEIEFYSDDDLHRILEILN 277
>gi|260437677|ref|ZP_05791493.1| spoOJ protein [Butyrivibrio crossotus DSM 2876]
gi|292809903|gb|EFF69108.1| spoOJ protein [Butyrivibrio crossotus DSM 2876]
Length = 287
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 169/290 (58%), Gaps = 7/290 (2%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LGRGL LI V + EK E ++ + I+ I PN + PR F+ + + +L
Sbjct: 4 KKGLGRGLNNLIPGVK---EPEEKIVEVTADTV--LKINDIEPNRNQPRKNFDEDTILEL 58
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SIK +G+I+P++V D Y+IIAGERR+RAAK A L EVPV+I+N + ++E+A+
Sbjct: 59 ADSIKQYGVIEPIVVTKRD-NYYEIIAGERRWRAAKKAGLKEVPVVIKNFSEQEAMEVAL 117
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR++LNP+EEAL Y++LI +Y Q+++ V KSR V N LR+LKL V++M+
Sbjct: 118 IENIQRENLNPIEEALAYQKLIKDYKLKQDEVAEKVSKSRVAVTNSLRLLKLDERVQKMV 177
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ IS GHAR L++ S+ + + + E+ + N + K + +
Sbjct: 178 IDDMISGGHARALLAVSNGDTQYALAMKAFDEKLSVREVEKLIKNIGSEETKKPKDKPKD 237
Query: 247 EKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGE 295
+ D+E K+ +G + I ++ NNKG+ I+Y + + + I L+ +
Sbjct: 238 DFVYRDIESKLKEIIGTKVVIHNKNNNKGKIEIEYYSQDDFERIIELIKK 287
>gi|240145755|ref|ZP_04744356.1| stage 0 sporulation protein J [Roseburia intestinalis L1-82]
gi|257202171|gb|EEV00456.1| stage 0 sporulation protein J [Roseburia intestinalis L1-82]
Length = 308
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 109/302 (36%), Positives = 179/302 (59%), Gaps = 11/302 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDC-----ISIHSIVPNPHNPRN 56
S KR LG+G+ +LI + E ++ ++I+ + PN PR
Sbjct: 4 SMATKKRGLGQGIDSLIPNKVNANKETETVKVNAGSEKNETDGIFVNINKVEPNREQPRK 63
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
F+ + L DL +SIK G++QPL+V Y+IIAGERR+RAAK+A L EVPV I N+
Sbjct: 64 NFDEDSLVDLSESIKQVGVLQPLLV-LDKKDYYEIIAGERRWRAAKLAGLKEVPVRIMNL 122
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++ +EI++VEN+QR++LNP+EEA Y++L++E+ Q+++ V KSR+ V N +R+L
Sbjct: 123 TDQEVVEISLVENIQRENLNPIEEAFAYKRLLTEFHLKQDEVAERVSKSRTAVTNSMRLL 182
Query: 177 KLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
KL V++M+ + I+ GHAR L+ + AQ I + +SVR+TE+LV++ N K
Sbjct: 183 KLDERVQQMVIDDMITTGHARALLGIEDAEKQFATAQKIFDENLSVRETEKLVKKIQNNK 242
Query: 234 EKRKKIFEGS-REKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICS 291
+ + + S E DLE+K+ S +G ++I +++ KG+ I+Y + ++L I
Sbjct: 243 DIPVEKKKVSDPAMEAIYHDLEEKMKSILGTKVAINKKDDQKGKIEIEYYSMDELDRIID 302
Query: 292 LL 293
L+
Sbjct: 303 LI 304
>gi|206891165|ref|YP_002249780.1| stage 0 sporulation protein J [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206743103|gb|ACI22160.1| stage 0 sporulation protein J [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 284
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 104/295 (35%), Positives = 176/295 (59%), Gaps = 18/295 (6%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LG+GL ALI +V ++ S + I I+P PR F+ + L++L
Sbjct: 2 KKALGKGLDALIPKVEKAEKEA---------SLIEVPIERILPGIAQPRTGFDEKALKEL 52
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
QSIK GIIQP+++ +G ++IIAGERR+RAAK+A L ++P II++V ++EIA+
Sbjct: 53 AQSIKEKGIIQPVVLSRAGDGTFRIIAGERRWRAAKLAGLEKIPAIIKDVSPAEAVEIAL 112
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DL+P+E A +E+L+ E+ TQ ++ VGK R+ +AN LRILKLP ++ +
Sbjct: 113 IENIQREDLDPVETASAFERLLKEFNITQEELSQRVGKDRATIANYLRILKLPEEIKTYL 172
Query: 187 RKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ +++GHA+ +V + +AQ+++ K +SVR TEELV+ + +
Sbjct: 173 KDGSLTIGHAKAIVSIDDSQKQKEVAQIVIKKSLSVRQTEELVKRLAK------PLLKKQ 226
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
+EK + LE +++S++G + I H+ G+ I Y + ++L I + + F
Sbjct: 227 KEKFPEIAQLEDRLTSELGAKVKISHKGKGGRLEIFYNSLDELDGILQRIFKKSF 281
>gi|300857406|ref|YP_003782390.1| putative spo0J [Clostridium ljungdahlii DSM 13528]
gi|300437521|gb|ADK17288.1| putative spo0J [Clostridium ljungdahlii DSM 13528]
Length = 286
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 103/289 (35%), Positives = 162/289 (56%), Gaps = 6/289 (2%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E S ++ E + I I I N PR F+ + +
Sbjct: 3 KKYGLGKGLRALIPE------SALEEKEESKKDTILIDIDLISANKTQPRKNFDEQKILQ 56
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSI+ HGIIQPLI+ I + Y I+AGERR+RAAK+A++ EVP II N+ +K LEI+
Sbjct: 57 LSQSIQEHGIIQPLILNKIGDDAYSIVAGERRWRAAKLANIKEVPAIIMNLSDKEILEIS 116
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEAL Y++LI+++ TQ ++ +GKSR+ + N +R+L L S V+E
Sbjct: 117 LIENIQRQDLNPIEEALAYKRLINDFNLTQEELSVKIGKSRTAITNCMRLLNLDSRVQEY 176
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
I I+ GH R L+ D ++ + ++ + N + + ++
Sbjct: 177 IIDGVITEGHGRALLGVDDGELQYKLAQNIIDENLTVRDIEKIIKNLNSSKAAKNDNIKK 236
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
Y D+ +K+ G +S+ + NKG+ I+Y + E L+ I +L
Sbjct: 237 ANPYYVDIREKLEDLFGTKVSLMDKKNKGKIQIEYYSQEDLQRILDILK 285
>gi|220927467|ref|YP_002504376.1| parB-like partition protein [Clostridium cellulolyticum H10]
gi|219997795|gb|ACL74396.1| parB-like partition protein [Clostridium cellulolyticum H10]
Length = 281
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 106/287 (36%), Positives = 158/287 (55%), Gaps = 11/287 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K+ LGRGL ALI +S + I+ + PN PR F+ E L
Sbjct: 1 MIKKGLGRGLGALISNEALEEES----------GILQLRINELEPNIGQPRKNFDDEKLV 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L +SIK HGIIQP+IV+ D+ I AGERR+RAAK+A L+ VPVI+ N NK ++E+
Sbjct: 51 QLAESIKQHGIIQPIIVKKSDSIYTII-AGERRWRAAKLAGLTNVPVIVNNFSNKQTMEV 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEA + L+ EY TQ I + +GKSR +AN LR+L L VR+
Sbjct: 110 ALIENLQREDLNPIEEAEAFLHLMDEYNLTQEQIAATIGKSRPAIANSLRLLGLKDDVRK 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
I E++ GHARTLV D + + E + K+ + +
Sbjct: 170 YIISGELTSGHARTLVIIQDEELQKKAADFIIENKLSVRETENYVKKLCKGNNKVRKTTE 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICS 291
L D+E K+ + +G + ++ +NNKG+ I+Y +N++L+ +
Sbjct: 230 VSNPELIDVENKLKNILGTKVKLQSKNNKGKITIEYYSNDELERLLD 276
>gi|187930585|ref|YP_001901072.1| parB-like partition protein [Ralstonia pickettii 12J]
gi|187727475|gb|ACD28640.1| parB-like partition protein [Ralstonia pickettii 12J]
Length = 303
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 102/306 (33%), Positives = 187/306 (61%), Gaps = 13/306 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + +++ +++ + + + + P + PR +
Sbjct: 1 MST-MKKKGLGRGLEALLGSPAEIVEAAKQE-----GAPTVLKLEQMQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID----NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI++ G++QP++VR ++ Y+IIAGERRFRA+++A L+EVPV++++V
Sbjct: 55 GALQELAASIRAQGLMQPILVRKVESDGAKPKYEIIAGERRFRASRLAGLTEVPVLVKDV 114
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++S+ +A++EN+QR+DLNPLEEA G +L+ E+ +T VG+SRS V+N+LR+L
Sbjct: 115 PDESAAAMALIENIQREDLNPLEEAQGIARLVREFQFTHEQAAESVGRSRSAVSNLLRLL 174
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ M+ ++ +GHAR L V + ++LA IV+K++SVR+TE+LV E
Sbjct: 175 NLAQPVQTMLMAGDLDMGHARALLAVDGATQITLANQIVNKRLSVRETEKLVALTLKPFE 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ +G + + + LE++++ ++GL + IK +GQ +++ + ++ + + L
Sbjct: 235 LKSLKQKGGHQGGRDVARLEEELADQLGLGVQIKLAAKGRGQLTVQFSSLDEFDGLLARL 294
Query: 294 GENDFE 299
+ E
Sbjct: 295 RPDGNE 300
>gi|321313657|ref|YP_004205944.1| site-specific DNA-binding protein [Bacillus subtilis BSn5]
gi|320019931|gb|ADV94917.1| site-specific DNA-binding protein [Bacillus subtilis BSn5]
Length = 282
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 101/291 (34%), Positives = 160/291 (54%), Gaps = 13/291 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL + + E+ + I I + PNP+ PR +F+ E L +L
Sbjct: 3 KGLGKGINALF-----------NQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELK 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+S+ HGI+QPLIVR Y I+AGERRFRAAK+A L VP I+R + EIA++
Sbjct: 52 ESVLQHGILQPLIVRK-SLKGYDIVAGERRFRAAKLAGLDTVPAIVRELSEALMREIALL 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ TQ + +GKSR H+AN LR+L LP +++++I
Sbjct: 111 ENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLTLPENIQQLIA 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR-EK 246
+ +S+GH RTL+ + L ++ + +L Q + + + K
Sbjct: 171 EGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKELVK 230
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ L + E + + G ++IK + KG+ I++ +NE L I LL E +
Sbjct: 231 DAVLKERESYLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERE 281
>gi|297545646|ref|YP_003677948.1| parB-like partition protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843421|gb|ADH61937.1| parB-like partition protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 286
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 117/297 (39%), Positives = 185/297 (62%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ SK+ LGRGL ALI E P+ + I+I I PN + PR F
Sbjct: 1 MA---SKKGLGRGLQALIPEYQGEE----------PQGVETINIAYIHPNQYQPRKQFNE 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L +SIK +GIIQP+IVR + +G Y+I+AGERR+RAAK+A LSE+P I+R+ D+
Sbjct: 48 ESLKELAESIKQNGIIQPIIVRKVASG-YQIVAGERRWRAAKIAGLSEIPAIVRDFDDLQ 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DLNP+EEA Y+ LI ++ TQ +I +GKSRS +AN +R+L L
Sbjct: 107 VMEIALIENLQREDLNPIEEAKAYKALIEQFNLTQEEISKKIGKSRSVIANSIRLLNLDD 166
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M+ K EI++GHA+ + S + A+ +V++ ++VR+TE+LV+ K K
Sbjct: 167 RVQAMLVKGEITIGHAKVILSLPSKNLQYEAAKKVVTENLNVRETEDLVKNLLRKNGKSS 226
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+ + +R + ++ ++E + S +G + I + N+G I+Y ++E L I L+
Sbjct: 227 QKGKSNR-IDIHIKEIEDNLCSFLGTKVKISQRGKNRGIIQIEYYSDEDLTRIIELI 282
>gi|167041013|ref|YP_001663998.1| parB-like partition protein [Thermoanaerobacter sp. X514]
gi|256751466|ref|ZP_05492344.1| parB-like partition protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300913776|ref|ZP_07131093.1| parB-like partition protein [Thermoanaerobacter sp. X561]
gi|307725538|ref|YP_003905289.1| parB-like partition protein [Thermoanaerobacter sp. X513]
gi|166855253|gb|ABY93662.1| parB-like partition protein [Thermoanaerobacter sp. X514]
gi|256749685|gb|EEU62711.1| parB-like partition protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300890461|gb|EFK85606.1| parB-like partition protein [Thermoanaerobacter sp. X561]
gi|307582599|gb|ADN55998.1| parB-like partition protein [Thermoanaerobacter sp. X513]
Length = 286
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 112/291 (38%), Positives = 185/291 (63%), Gaps = 16/291 (5%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LGRGL ALI E P+ + I+I I PN + PR F+ + L++L
Sbjct: 4 KKGLGRGLQALIPEYRTEE----------PQGVETINIAYIHPNQYQPRKQFDEDSLKEL 53
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
+SIK HG+IQP+IVR +D+G Y+I+AGERR+RAAK+A LSE+P I+++ D+ +EIA+
Sbjct: 54 SESIKQHGVIQPIIVRKVDSG-YQIVAGERRWRAAKIAGLSEIPAIVKDFDDLQVMEIAL 112
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLNP+EEA Y+ LI ++ TQ +I +GKSRS +AN +R+L L V+EM+
Sbjct: 113 IENLQREDLNPIEEAKAYKALIEQFNLTQEEISKKIGKSRSVIANSIRLLNLDDRVQEML 172
Query: 187 RKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
K +I++GHA+ + + + A+ +V++ ++VR+TE+LV+ K EK K + +
Sbjct: 173 VKGDITIGHAKVILSLPNKNLQYEAAKKVVTENLNVRETEDLVKNLLRKNEKITKKLKSN 232
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ ++E + S +G + I + ++G I+Y + E L I ++
Sbjct: 233 K-IDVHVKEIEDNLCSFLGTKVKISQKSKDRGIIQIEYYSEEDLTRIIEII 282
>gi|111226209|ref|YP_717003.1| chromosome partitioning protein parB [Frankia alni ACN14a]
gi|111153741|emb|CAJ65499.1| chromosome partitioning protein parB [Frankia alni ACN14a]
Length = 333
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 98/326 (30%), Positives = 166/326 (50%), Gaps = 36/326 (11%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEK-----------------------------K 31
MS + LGRGL ALI D P+
Sbjct: 1 MS--ARRSGLGRGLGALIPVAPPPADGPDAVRLAADGGRPDGGGGPLGAFGLRGGDSTGP 58
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
+ + + IVPNP PR +F+ + LE+L S++ G++QP++VR + Y++
Sbjct: 59 LPVHGATFRELEVGWIVPNPRQPRTHFDEDALEELAASLREVGLLQPVVVRQVAREQYEL 118
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
+ GERR+RA+++A L+ +P I+R + + L A++EN+ R+ LNPLEEA YEQL+ ++
Sbjct: 119 VMGERRWRASQLAELTRIPAIVRETADDAMLRDALLENLHRQQLNPLEEAAAYEQLLKDF 178
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSL 208
G T ++ +G+SRSHV N +R+L L +V+ + +S GHAR +L L
Sbjct: 179 GATHEELAGRLGRSRSHVTNTIRLLGLSPAVQRRVAAGVLSAGHARALLSLRDPEAQDRL 238
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK 268
A IV++ +SVR EE+V ++ RK+ G R L+ L ++S + + +
Sbjct: 239 ATRIVAEGLSVRAVEEIV--ALDEDTPRKRAPRGPRSTPPTLSRLADQLSDRFETRVKVD 296
Query: 269 HRNNKGQFCIKYETNEQLKIICSLLG 294
KG+ +++ + E L+ I +++
Sbjct: 297 MGRTKGKITVEFGSLEDLERIVAVMS 322
>gi|295402132|ref|ZP_06812091.1| parB-like partition protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|312112747|ref|YP_003991063.1| parB-like partition protein [Geobacillus sp. Y4.1MC1]
gi|294975815|gb|EFG51434.1| parB-like partition protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217848|gb|ADP76452.1| parB-like partition protein [Geobacillus sp. Y4.1MC1]
Length = 285
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 108/290 (37%), Positives = 170/290 (58%), Gaps = 15/290 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL + + E+ + IH + PNP+ PR F E +E+L
Sbjct: 3 KGLGKGIDALFSHLALKDE----------ETIKEVDIHQLHPNPYQPRKTFHPEAIEELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI HGI+QPLIVR ++I+ GERR+RAAK A+L VPV++R + ++ +E A++
Sbjct: 53 QSILQHGILQPLIVRK-SIKGFEIVVGERRYRAAKEANLETVPVVVRELTDQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L+ + TQ +I VGKSR H+AN LR+L LP V+++I
Sbjct: 112 ENLQREDLNPIEEAMAYKTLMDQLRLTQEEIAIRVGKSRPHIANHLRLLSLPKDVQKLIV 171
Query: 188 KEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
IS+GH R L+ + I+ ++++VR E+L+QE + R+
Sbjct: 172 DGTISMGHGRALLGLKHKNKMKLIVDRIIREQLNVRQLEKLIQEMNKN-VSRETPKRKPV 230
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
EK +L + E + K+G N++IK KG+ I++ ++E L+ I LL
Sbjct: 231 EKSVFLKESESLLREKLGTNVTIKQTRKKGKIEIEFFSSEDLERILELLN 280
>gi|330837801|ref|YP_004412442.1| parB-like partition protein [Spirochaeta coccoides DSM 17374]
gi|329749704|gb|AEC03060.1| parB-like partition protein [Spirochaeta coccoides DSM 17374]
Length = 319
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 108/312 (34%), Positives = 178/312 (57%), Gaps = 19/312 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPES----------QDCISIHSIVPN 50
MS + K LG+G+ AL+ + + ++P++ I I + PN
Sbjct: 1 MSPS-KKHGLGKGIGALMDDYSFDTVYETAVAHSLPDASSPESAKGLLVQEIEIERLHPN 59
Query: 51 PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
P+ PR F+ E LE+L +SI++ GI+QPL+V I + Y IIAGERR+RAAK+A L+ VP
Sbjct: 60 PNQPRKTFDGETLEELAESIRNQGILQPLLVERISDKDYSIIAGERRYRAAKLAGLAAVP 119
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
VI+++ N+ LE+++VEN+QR++LN +EEA Y LI + G Q D+ VGK+R+ +
Sbjct: 120 VIVKDFTNQQRLEVSLVENIQRENLNAIEEAQAYAYLIKDAGIRQEDLAQRVGKNRTTIT 179
Query: 171 NILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQ 227
N LR+L+LP +E + K +S GHAR ++V+ +D L + ++ +++SVR+ E L
Sbjct: 180 NSLRLLQLPPVFKEAVAKGRLSAGHARALLSVVNPADQEILYRRVIEQELSVREAERLAS 239
Query: 228 EQDNKKEKRKKIFEGSR-----EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYET 282
+ + K + SR K + +E K G+ + +K KG+ I Y++
Sbjct: 240 DFNYGKRLSRPGKGPSRGDALPMKSADILAIENKFLEVTGVRVEVKGSIEKGKIEITYQS 299
Query: 283 NEQLKIICSLLG 294
E+L+ I +L+
Sbjct: 300 QEELERIYALIS 311
>gi|52082641|ref|YP_081432.1| stage 0 sporulation protein J [Bacillus licheniformis ATCC 14580]
gi|52788040|ref|YP_093869.1| hypothetical protein BLi04368 [Bacillus licheniformis ATCC 14580]
gi|319648507|ref|ZP_08002723.1| Spo0J protein [Bacillus sp. BT1B_CT2]
gi|52005852|gb|AAU25794.1| Stage 0 sporulation protein J [Bacillus licheniformis ATCC 14580]
gi|52350542|gb|AAU43176.1| Spo0J [Bacillus licheniformis ATCC 14580]
gi|317389586|gb|EFV70397.1| Spo0J protein [Bacillus sp. BT1B_CT2]
Length = 282
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 98/291 (33%), Positives = 160/291 (54%), Gaps = 13/291 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL V+ E+ + I + + PNP+ PR F+ + L+DL
Sbjct: 3 KGLGKGINALFSNVD-----------LSEETVEEIKLQDLRPNPYQPRKTFDDQSLKDLK 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI HG++QP+IVR Y I+AGERRFRAA+ A L +P I+R + +EIA++
Sbjct: 52 ESILQHGVLQPIIVRK-SIKGYDIVAGERRFRAAEKAGLETIPAIVRELSESLMMEIALL 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA YE L+ TQ + +GKSR H+AN LR+L LP V+++I
Sbjct: 111 ENLQREDLSPLEEAKAYESLLKHLDMTQEQLAKRLGKSRPHIANHLRLLTLPEDVQKLID 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE-K 246
+S+GH RTL+ + L ++ + +L + + + ++ K
Sbjct: 171 NGTLSMGHGRTLLGLKNKKKLEPLVQKVVSEQLNVRQLEKLIQQLNADVPRETKKPKQVK 230
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ + + E + + G ++IK + KG+ I++ +NE L+ I LL + D
Sbjct: 231 DAVIKERESYLRNYFGTPVTIKKQKKKGRIEIEFYSNEDLERILELLAQED 281
>gi|289579523|ref|YP_003478150.1| parB-like partition protein [Thermoanaerobacter italicus Ab9]
gi|289529236|gb|ADD03588.1| parB-like partition protein [Thermoanaerobacter italicus Ab9]
Length = 286
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 115/297 (38%), Positives = 185/297 (62%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ SK+ LGRGL ALI E P+ + I+I I PN + PR F
Sbjct: 1 MA---SKKGLGRGLQALIPEYQGEE----------PQGVETINIAYIHPNQYQPRKQFNE 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L +SIK +GIIQP+IVR + +G Y+I+AGERR+RAAK+A LSE+P I+R+ D+
Sbjct: 48 ESLKELAESIKQNGIIQPIIVRKVASG-YQIVAGERRWRAAKIAGLSEIPAIVRDFDDLQ 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DLNP+EEA Y+ LI ++ TQ +I +GKSRS +AN +R+L L
Sbjct: 107 VMEIALIENLQREDLNPIEEAKAYKALIEQFNLTQEEISKKIGKSRSVIANSIRLLNLDD 166
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M+ K +I++GHA+ + + + A+ +V++ ++VR+TE+LV+ K K
Sbjct: 167 RVQAMLVKGDITIGHAKVILSLPNKNLQYEAAKKVVTENLNVRETEDLVKNLLRKNGKSS 226
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+ + +R + ++ ++E + S +G + I + N+G I+Y ++E L I L+
Sbjct: 227 QKGKSNR-IDIHIKEIEDNLCSFLGTKVKISQRGKNRGIIQIEYYSDEDLTRIIELI 282
>gi|313886894|ref|ZP_07820598.1| putative stage 0 sporulation protein J [Porphyromonas
asaccharolytica PR426713P-I]
gi|312923691|gb|EFR34496.1| putative stage 0 sporulation protein J [Porphyromonas
asaccharolytica PR426713P-I]
Length = 298
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 109/307 (35%), Positives = 178/307 (57%), Gaps = 23/307 (7%)
Query: 1 MSNNYS-KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+N + +GRGL AL+G+++ S S I+I I PNP PR +F+
Sbjct: 1 MTNKKKENKVIGRGLDALLGDMSNS------------SSISEIAIDQIEPNPDQPRRHFD 48
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E LE+L SI++ GI+QP+ VR + +G + II+GERR+RA+K+A+L+ +P I +++
Sbjct: 49 PESLEELAASIRALGIVQPITVRELTDGRHLIISGERRWRASKLANLTSIPAYIVKANDE 108
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+E+A++EN+QR+DLN +E AL Y++L+ TQ ++ VGK+RS ++N LR+L+LP
Sbjct: 109 QVVEMALIENIQREDLNAIEIALTYKRLLEHSEGTQEELAKKVGKTRSSISNYLRLLRLP 168
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ V+ + +++I +GHAR ++S +DP Q +S+ +SVR E L E E
Sbjct: 169 AEVQLGLTEKKIDMGHARAILSLTDPAQQLKLYQTTLSEHLSVRQVEALANEMQEPSEDT 228
Query: 237 KKIFEGSREKEK------YLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKII 289
K + + K L K++SS G +S++ + KG I + + EQL I
Sbjct: 229 TKASKKRQTLSKLASHGNDYAPLAKQLSSFFGTKVSLRCKESGKGSITIPFSSEEQLIEI 288
Query: 290 CSLLGEN 296
CS+L
Sbjct: 289 CSILESG 295
>gi|304405899|ref|ZP_07387557.1| parB-like partition protein [Paenibacillus curdlanolyticus YK9]
gi|304345142|gb|EFM10978.1| parB-like partition protein [Paenibacillus curdlanolyticus YK9]
Length = 282
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 94/291 (32%), Positives = 177/291 (60%), Gaps = 16/291 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLGRGL ALI ++ D + I++ + PNP+ PR F+ E + +L
Sbjct: 3 KRLGRGLDALIPSLSVKDD----------DKVIEIALGQLRPNPYQPRKTFDEESIRELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SIK HG+IQP+IVR + Y+IIAGERR+RA+++ + +P ++R ++ +EIA++
Sbjct: 53 ESIKQHGVIQPIIVRTV-LKGYEIIAGERRYRASQLCGNTTIPAVVRTFTDQQVMEIALI 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLN +E A+ Y+ L+ ++ TQ ++ VGKSRSH+AN LR+L LP+ +++ +
Sbjct: 112 ENLQREDLNAIETAIAYQALVDKFQLTQEELSMKVGKSRSHIANFLRLLTLPAEIKDNVS 171
Query: 188 KEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ +S+GHAR + + LA++ + ++ SVR+ E ++Q +++ +K ++
Sbjct: 172 RGTLSMGHARALVGIKEVKEQQELARLTIEQEWSVRELEAVIQ--KQSEKQPEKAKVKAK 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+++ YL +E+ + + + +K + +KG+ + Y + L+ + +L +
Sbjct: 230 KRDPYLESIEETLREQFKTTVRVKQQKDKGRIELMYYNKQDLERLLEILQQ 280
>gi|91214654|ref|ZP_01251627.1| putative chromosome partitioning protein parB [Psychroflexus
torquis ATCC 700755]
gi|91187081|gb|EAS73451.1| putative chromosome partitioning protein parB [Psychroflexus
torquis ATCC 700755]
Length = 301
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 107/302 (35%), Positives = 179/302 (59%), Gaps = 6/302 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI-DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + + I + +K + + S +S+ +I NP PR F
Sbjct: 1 MAKTTKKKALGRGLSALLNDPDNDIKSTEDKNADKVVGSIVELSLGAIEVNPFQPRTSFS 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ L++L SI+ G+IQP+ VR ++ Y++++GERR+RA+KM L +P IR +++
Sbjct: 61 EDTLKELASSIRELGVIQPITVRKLEFNKYQLVSGERRYRASKMLGLETIPSYIRIANDR 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E AL Y++L+ + TQ ++ VGK+RS +AN LR+LKL
Sbjct: 121 ESLEMALVENIQRQDLDPIEIALSYQRLMDDIDLTQEELSDRVGKNRSTIANYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ +R +S+GH R + +T L + + I+ K+SVRDTE LV+ K+
Sbjct: 181 PIIQTGMRDGFLSMGHGRALINITNTDIQLQVYERILKNKLSVRDTENLVRHMQQNKDTS 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
K E R EK L K+ISS G + +K ++ G+ + + ++E + I L+
Sbjct: 241 KPSSEELRVDEKKSKSL-KQISSYFGAKVELKVNKKGNGKLIVPFSSDEDFQRIKKLIQG 299
Query: 296 ND 297
+
Sbjct: 300 DS 301
>gi|161523276|ref|YP_001578288.1| parB-like partition protein [Burkholderia multivorans ATCC 17616]
gi|189351951|ref|YP_001947579.1| chromosome partitioning protein [Burkholderia multivorans ATCC
17616]
gi|221202188|ref|ZP_03575223.1| chromosome-partitioning protein ParB [Burkholderia multivorans
CGD2M]
gi|221208751|ref|ZP_03581750.1| chromosome-partitioning protein ParB [Burkholderia multivorans
CGD2]
gi|221214298|ref|ZP_03587270.1| chromosome-partitioning protein ParB [Burkholderia multivorans
CGD1]
gi|160340705|gb|ABX13791.1| parB-like partition protein [Burkholderia multivorans ATCC 17616]
gi|189335973|dbj|BAG45043.1| chromosome partitioning protein [Burkholderia multivorans ATCC
17616]
gi|221165953|gb|EED98427.1| chromosome-partitioning protein ParB [Burkholderia multivorans
CGD1]
gi|221171383|gb|EEE03831.1| chromosome-partitioning protein ParB [Burkholderia multivorans
CGD2]
gi|221177982|gb|EEE10394.1| chromosome-partitioning protein ParB [Burkholderia multivorans
CGD2M]
Length = 297
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 179/299 (59%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV+++ V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLEEVPVLVKEVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L +
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAA 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAQTTKEAPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVTIDFGNLDALEGILVRLRGN 292
>gi|312897454|ref|ZP_07756878.1| ParB-like partition protein [Megasphaera micronuciformis F0359]
gi|310621515|gb|EFQ05051.1| ParB-like partition protein [Megasphaera micronuciformis F0359]
Length = 300
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 175/301 (58%), Gaps = 18/301 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K LG+G+ AL + ++ T+ + + + S+VPN R F+
Sbjct: 1 MS--AKKGGLGKGVNALFRD--------KETNTTLHGAVTELPLASVVPNSQQARRIFDE 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L++L +SI+++GI+QPL+VRA+ G Y+IIAGERR+RAAK A L++VPV++R +++
Sbjct: 51 QALQELSESIRTYGIVQPLVVRAVGEGRYEIIAGERRWRAAKAAGLTQVPVVVRTYEDRV 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ E++++EN+QR++LN +EEA Y+ LI G+TQ ++ VGKSRSHVAN++RIL L
Sbjct: 111 AAEVSLIENIQRENLNVVEEATAYKVLIDMNGWTQEELAEKVGKSRSHVANLMRILGLSP 170
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+V + + +++G AR L S A I + ++ R E+ V+ + R
Sbjct: 171 AVLKAVEAGVLTMGQARPLLALSEESVQKKAALHIATAGLNARQAEQFVKHLLEGSQGRS 230
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ + ++ L ++ G N++I+ ++ NKG+ I + + + + + SLL E
Sbjct: 231 DVPPA----DAHVEALRDRLKMHFGTNVAIRINKKNKGKIEISFASEAEFERLMSLLTET 286
Query: 297 D 297
+
Sbjct: 287 N 287
>gi|198276300|ref|ZP_03208831.1| hypothetical protein BACPLE_02494 [Bacteroides plebeius DSM 17135]
gi|198270742|gb|EDY95012.1| hypothetical protein BACPLE_02494 [Bacteroides plebeius DSM 17135]
Length = 298
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 161/302 (53%), Gaps = 16/302 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL ALI E+ + S + I + I NP+ PR F+
Sbjct: 1 MAV-QKKFALGRGLDALISN--------EEVKTSGSSSINEIELDKISVNPNQPRREFDP 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R ++ Y+IIAGERR+RA+ +A L +P IR D+++
Sbjct: 52 IALQELADSIAEIGIIQPITLRKLNEDSYQIIAGERRYRASILAGLKTIPAYIRTADDEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN LE AL Y+ LI +Y TQ + +GK R+ +AN LR+LKLP+
Sbjct: 112 VMEMALIENIQREDLNSLEIALAYQHLIEQYELTQERLSERIGKKRTTIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIV------SKKMSVRDTEELVQEQDNKKE 234
++ ++ +EI +GHAR L++ DP + ++ V + + + ++ K
Sbjct: 172 PIQVALKNKEIDMGHARALLTLEDPKTQIRIFNETVAQGYSVRKVEEIVKALANGESIKS 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
K I + + + L+ + + G + + KG+ I + ++ L+ I +L
Sbjct: 232 GGKTISAKGTQLSEEYSMLQNHLCTFFGTKVQLSCTNKGKGKISIPFNSDADLERIMEIL 291
Query: 294 GE 295
Sbjct: 292 DS 293
>gi|229824652|ref|ZP_04450721.1| hypothetical protein GCWU000282_01999 [Catonella morbi ATCC 51271]
gi|229786023|gb|EEP22137.1| hypothetical protein GCWU000282_01999 [Catonella morbi ATCC 51271]
Length = 297
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 184/301 (61%), Gaps = 16/301 (5%)
Query: 1 MSNN----YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRN 56
M+N + LGRG+ AL +P ++T + E + I++ I PNPH PR
Sbjct: 1 MANKPKPKQKRSGLGRGMDALF--------TPLEETPSEFEQVEEITLEDIRPNPHQPRK 52
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+F E L +L SI+++G+ QP+IVR Y+++AGERR RA+++A L+ +P I+R +
Sbjct: 53 HFNEEALNELADSIRNNGVFQPIIVRKSAIKGYELVAGERRVRASRLAGLTTIPAIVRQL 112
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D + +EIA++EN+QR+DL+PLEEA Y+ L+++ TQ ++ +GKSR ++AN LR+L
Sbjct: 113 DERVMIEIAVLENLQREDLSPLEEAEAYDMLMNKLNLTQAEVAERMGKSRPYIANYLRLL 172
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQVIVSKKMSVRDTEELVQEQDNKK 233
LP V+++++KE +S+G ARTL+S D LAQ ++ ++++VR E+LVQ+ + K
Sbjct: 173 TLPDEVKKLVQKEALSMGQARTLLSLKDKKQLVTLAQRVIKEQLTVRQLEDLVQQLNEKS 232
Query: 234 EKRKKIFEGSREKEK-YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
+ ++ +K+ Y+ E+K+ + G I+ R +KG+ I+Y L I L
Sbjct: 233 QAKQIKKTKKADKKPSYILACEQKLQERFGTMALIQQRGDKGKIEIEYMDESDLMRILDL 292
Query: 293 L 293
L
Sbjct: 293 L 293
>gi|86743215|ref|YP_483615.1| chromosome segregation DNA-binding protein [Frankia sp. CcI3]
gi|86570077|gb|ABD13886.1| chromosome segregation DNA-binding protein [Frankia sp. CcI3]
Length = 333
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 97/329 (29%), Positives = 165/329 (50%), Gaps = 37/329 (11%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETI------------------------- 35
MS + LGRGL ALI +D
Sbjct: 1 MS--ARRSGLGRGLGALIPVAPPPLDGQAGTASADYADYADYASGYGGRGTNRGSGDGTG 58
Query: 36 -----PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ I + S+ PNP PR +F+ + LE+L S++ G++QP++VR + Y+
Sbjct: 59 PLPVHGATFREIPVESVSPNPRQPRTHFDEDALEELAASLREVGLLQPIVVREVAPERYE 118
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
++ GERR+RA+K+A L +P I+R + + L A++EN+ R+ LNPLEEA YEQL+ +
Sbjct: 119 LVMGERRWRASKIAKLPRIPAIVRETADDAMLRDALLENLHRQQLNPLEEAAAYEQLLRD 178
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLS 207
+G T ++ S +G+SRSHV N++R+L L +V+ + +S GHAR +L
Sbjct: 179 FGATHEELASRLGRSRSHVTNMIRLLGLSPAVQRRVAAGVLSAGHARALLSLQDPDAQDR 238
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
LA IV++ +SVR EE+V + + RK+ L L ++S + + +
Sbjct: 239 LATRIVAEGLSVRAVEEIV--ALDDEAPRKRASRAPGAASPALVRLADRLSDRFETRVKV 296
Query: 268 KHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+KG+ +++ + E L+ I +++ +
Sbjct: 297 DMGRSKGKITVEFASIEDLERIVAVMSPS 325
>gi|332299997|ref|YP_004441918.1| parB-like partition protein [Porphyromonas asaccharolytica DSM
20707]
gi|332177060|gb|AEE12750.1| parB-like partition protein [Porphyromonas asaccharolytica DSM
20707]
Length = 298
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 179/304 (58%), Gaps = 23/304 (7%)
Query: 1 MSNNYS-KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+N + +GRGL AL+G+++ S S I+I I PNP PR +F+
Sbjct: 1 MTNKKKENKVIGRGLDALLGDMSNS------------SSISEIAIDQIEPNPDQPRRHFD 48
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E LE+L SI++ GI+QP+ VR + +G + II+GERR+RA+K+A+L+ +P I D++
Sbjct: 49 PESLEELAASIRALGIVQPITVRELTDGRHLIISGERRWRASKLANLTSIPAYIVKADDE 108
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+E+A++EN+QR+DLN +E AL Y++L+ TQ ++ VGK+RS ++N LR+L+LP
Sbjct: 109 KVVEMALIENIQREDLNAIEIALTYKRLLEHSEGTQEELAKKVGKTRSSISNYLRLLRLP 168
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ V+ + +++I +GHAR ++S +DP Q +S+ +SVR E L E ++
Sbjct: 169 AEVQLGLTEKKIDMGHARAILSLTDPAQQLKLYQTTLSEHLSVRQVEALANEMQEPSQET 228
Query: 237 KKIFEGSREKEK------YLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKII 289
+ + + K L K++SS G +S++ + KG I + + EQL I
Sbjct: 229 TQASKKRQTLSKLASHGNDYAPLAKQLSSFFGTKVSLRCKESGKGSITIPFSSEEQLIEI 288
Query: 290 CSLL 293
CS+L
Sbjct: 289 CSIL 292
>gi|299820861|ref|ZP_07052750.1| plasmid partition ParB protein [Listeria grayi DSM 20601]
gi|299817882|gb|EFI85117.1| plasmid partition ParB protein [Listeria grayi DSM 20601]
Length = 283
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 90/286 (31%), Positives = 156/286 (54%), Gaps = 12/286 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL E ES I + I PNP PR F+ + +L
Sbjct: 3 KGLGKGINALF-----------NNVEGEEESVQNIELKLIEPNPFQPRKNFDKAAINELS 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R G Y+I+ GERRFRA+K A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNAKKG-YQIVVGERRFRASKEAGLKEIPAVVRDMTDAEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+P+EEA Y+ L+S TQ+ + VGKSR ++AN +R+L LP V++ +R
Sbjct: 111 ENLQREDLSPMEEAESYQFLMSNLELTQSKLAERVGKSRPYIANFVRLLTLPEVVQDYLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ + +L + + E + +
Sbjct: 171 DGSLSAGHGRALLGLKTKKNIVPLAEKSIKEALTVRQLEKLVTDINENVSRETVKAPRVP 230
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ +K G ++IK R+ KG+ I++ +++ L I +L
Sbjct: 231 IFIRETESQLRNKFGTAVNIKRRDKKGKIEIEFLSDDDLDRILEIL 276
>gi|154688202|ref|YP_001423363.1| hypothetical protein RBAM_038070 [Bacillus amyloliquefaciens FZB42]
gi|154354053|gb|ABS76132.1| Spo0J [Bacillus amyloliquefaciens FZB42]
Length = 283
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 107/296 (36%), Positives = 171/296 (57%), Gaps = 17/296 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K LG+G+ AL + + E+ + I I + PNP+ PR F+ E L
Sbjct: 1 MAKGGLGKGINALF-----------NQVDLSEETVEEIKISDLRPNPYQPRKQFDDESLA 49
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SI HGI+QP+IVR Y I+AGERR+RAAK+A VP I+R++ EI
Sbjct: 50 ELKESIIQHGILQPIIVRK-SLKGYDIVAGERRYRAAKLAGKETVPAIVRDLSESLMREI 108
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DL+PLEEAL Y+ L+ TQ + +GKSR H+AN LR+L LP S++
Sbjct: 109 ALLENLQREDLSPLEEALAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLTLPESIQN 168
Query: 185 MIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+I + +S+GH RTL + L + +V ++++VR E+L+Q+ +N + K +
Sbjct: 169 LIAEGTLSMGHGRTLLGLKNKDKLEPLVKKVVEEQLNVRQLEQLIQQLNNNVPRETK--K 226
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++ L + E + + G ++IK + KG+ I++ +NE L+ I LL E +
Sbjct: 227 KEPVQDVVLKERESYLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLERILELLSERE 282
>gi|328555780|gb|AEB26272.1| chromosome positioning near the pole and transport through the
polar septum / antagonist of Soj-dependent inhibition of
sporulation initiation [Bacillus amyloliquefaciens
TA208]
gi|328914169|gb|AEB65765.1| chromosome positioning near the pole and transport through the
polar septum / antagonist of Soj-dependent inhibition of
sporulation initiation [Bacillus amyloliquefaciens LL3]
Length = 283
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 13/294 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K LG+G+ AL + + E+ + I I + PNP+ PR F+ E L
Sbjct: 1 MAKGGLGKGINALF-----------NQVDLSEETVEEIKISDLRPNPYQPRKQFDDESLA 49
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SI HGI+QP+IVR Y I+AGERR+RAAK+A VP I+R + EI
Sbjct: 50 ELKESIIQHGILQPIIVRK-SLKGYDIVAGERRYRAAKLAGKETVPAIVRELSESLMREI 108
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DL+PLEEAL Y+ L+ TQ + +GKSR H+AN LR+L LP S++
Sbjct: 109 ALLENLQREDLSPLEEALAYDSLLKHLDITQEQLAKRLGKSRPHIANHLRLLTLPESIQN 168
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS- 243
+I + +S+GH RTL+ + L ++ + +L Q + +
Sbjct: 169 LIAEGTLSMGHGRTLLGLKNKNKLEPLVKKVVEEQLNVRQLEQLIQQLNSNVPRETKKKE 228
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++ L + E + + G ++IK + KG+ I++ +NE L+ I LL E +
Sbjct: 229 PVQDVVLKERESYLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLERILELLSERE 282
>gi|160932443|ref|ZP_02079833.1| hypothetical protein CLOLEP_01278 [Clostridium leptum DSM 753]
gi|156868402|gb|EDO61774.1| hypothetical protein CLOLEP_01278 [Clostridium leptum DSM 753]
Length = 289
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 171/301 (56%), Gaps = 16/301 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LG+GL A+ + S + I + PN PR F+
Sbjct: 1 MA--AKKGGLGKGLDAIF----------MENATENSNSTVTLKISELEPNQDQPRREFDD 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L SI HG++QPL+VR I G Y+I+AGERRFRA +MA + EVPV+IR + +
Sbjct: 49 EALAELADSIAQHGVLQPLLVRPIAGGGYQIVAGERRFRACRMAGVQEVPVVIRELSDGQ 108
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DL+P+EEA GY+ L+ Y +TQ ++ VGKSR + N +R+L+LP
Sbjct: 109 VMELALIENLQREDLSPIEEAQGYQTLMEHYHFTQEEVSRSVGKSRPAITNAMRLLRLPE 168
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ M+ ++S GHARTL++ AQ+ V + +SVR+ E+L ++ +
Sbjct: 169 EIIHMVSGGKLSAGHARTLLAFESEDDQLQAAQLAVKQGLSVRELEKLAKKANAVLHGGD 228
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICSLLGEN 296
+ + +++ ++ ++E ++ +G + I+ + KG I++ + E L+ + LLG
Sbjct: 229 ERAKRVKKRPVFIEEVELSLNEHLGRKVKIQEKGKEKGVLTIEFYSQEDLQNLARLLGGE 288
Query: 297 D 297
+
Sbjct: 289 E 289
>gi|41410441|ref|NP_963277.1| hypothetical protein MAP4343c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118464564|ref|YP_884416.1| ParB-like partition proteins [Mycobacterium avium 104]
gi|254777654|ref|ZP_05219170.1| ParB-like partition proteins [Mycobacterium avium subsp. avium ATCC
25291]
gi|41399275|gb|AAS06893.1| ParA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118165851|gb|ABK66748.1| ParB-like partition proteins [Mycobacterium avium 104]
Length = 328
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 160/317 (50%), Gaps = 29/317 (9%)
Query: 6 SKRRLGRGLAALIGEVNQSIDS---------------------PEKKTETIPESQDCISI 44
K LGRGLA+LI D+ ++ + IS
Sbjct: 7 KKGGLGRGLASLIPTGPAEGDAGPATLGPRMGDAAADVLIGGPAPQEASPVGAVYREISP 66
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG----LYKIIAGERRFRA 100
I NP PR F+ E L +L SI+ G++QP++VRAI Y+I+ GERR+RA
Sbjct: 67 ADIERNPRQPRQVFDEEALAELVHSIREFGLLQPIVVRAIKESASGARYQIVMGERRWRA 126
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
A+ A L+ +P I+R + + L A++EN+ R LNPLEEA Y+QL+ E+G T +++ +
Sbjct: 127 AQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAA 186
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS----TSDPLSLAQVIVSKK 216
+G+SR + N++R+LKLP +V+ + +S GHAR L+S LA IV++
Sbjct: 187 RIGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEELATRIVAEG 246
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQF 276
+SVR TEE V + + L D+ ++S+ +++ KG+
Sbjct: 247 LSVRATEEAVTLANRAGTTTPTPPRRKPIQMPGLQDVADRLSTAFDTRVTVSLGKRKGKI 306
Query: 277 CIKYETNEQLKIICSLL 293
+++ + + L+ I ++
Sbjct: 307 VVEFGSVDDLQRIIDVM 323
>gi|134301149|ref|YP_001114645.1| parB-like partition protein [Desulfotomaculum reducens MI-1]
gi|134053849|gb|ABO51820.1| chromosome segregation DNA-binding protein [Desulfotomaculum
reducens MI-1]
Length = 302
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 95/301 (31%), Positives = 161/301 (53%), Gaps = 7/301 (2%)
Query: 1 MSNNYSKRRLGRGLAALIG--EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR LG+GL AL+ + ++ + E+ I + I PNP PR
Sbjct: 1 MS---KKRGLGKGLQALMPITPITPTVHDTSNEFESDKGVLKEIKVSDIKPNPKQPRLRI 57
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ + L++L SIK +G++QP++VR G Y++IAGERR+RA + + +P +IR
Sbjct: 58 DPDKLQELVDSIKEYGVVQPVVVRTQPGGGYELIAGERRWRACQQLGMEHIPAVIREYGE 117
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
S IA++EN+QR++LNPLEEA Y +L+ E+ TQ+ + VGKSR + N++R+L L
Sbjct: 118 LQSAAIALIENLQRENLNPLEEATAYRRLMDEFQLTQDQVSQRVGKSRPQITNMVRLLSL 177
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN--KKEKR 236
P+ ++ + EIS+GHAR L+ ++ ++ + + +KE
Sbjct: 178 PNEIKVKLSNGEISVGHARPLLVLDSKNKQIELCELIIKRQLSVRQVEELIKSILEKEVT 237
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
K+ + + K+ + D+E ++ S +G + IK + G+ I Y + L + LL +
Sbjct: 238 KEEPKKDKPKDPQIMDIEDQLRSTLGTKVQIKTTKHGGRIEINYYNDADLTRLLELLIND 297
Query: 297 D 297
D
Sbjct: 298 D 298
>gi|308175804|ref|YP_003922509.1| chromosome positioning/antagonist of Soj-dependent inhibition of
sporulation initiation protein [Bacillus
amyloliquefaciens DSM 7]
gi|307608668|emb|CBI45039.1| chromosome positioning near the pole and transport through the
polar septum / antagonist of Soj-dependent inhibition of
sporulation initiation [Bacillus amyloliquefaciens DSM
7]
Length = 283
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 13/294 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K LG+G+ AL + + E+ + I I + PNP+ PR F+ E L
Sbjct: 1 MAKGGLGKGINALF-----------NQVDLSEETVEEIKISDLRPNPYQPRKQFDDESLA 49
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SI HGI+QP+IVR Y I+AGERR+RAAK+A VP I+R + EI
Sbjct: 50 ELKESIIQHGILQPIIVRK-SLKGYDIVAGERRYRAAKLAGKETVPAIVRELSESLMREI 108
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DL+PLEEAL Y+ L+ TQ + +GKSR H+AN LR+L LP S++
Sbjct: 109 ALLENLQREDLSPLEEALAYDSLLKHLDITQEQLAKRLGKSRPHIANHLRLLTLPESIQN 168
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS- 243
+I + +S+GH RTL+ + L ++ + +L Q + +
Sbjct: 169 LIVEGTLSMGHGRTLLGLKNKNKLEPLVKKVVEEQLNVRQLEQLIQQLNSNVPRETKKKE 228
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++ L + E + + G ++IK + KG+ I++ +NE L+ I LL E +
Sbjct: 229 PVQDVVLKERESYLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLERILELLSERE 282
>gi|315506961|ref|YP_004085848.1| parb-like partition protein [Micromonospora sp. L5]
gi|315413580|gb|ADU11697.1| parB-like partition protein [Micromonospora sp. L5]
Length = 346
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 86/283 (30%), Positives = 157/283 (55%), Gaps = 4/283 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G +++ + + I + +IVPNP PR+ F+ E LE+L SI+ G +QP
Sbjct: 58 GTPPPAVEPEPQLSPVPGARFAEIPVDAIVPNPKQPRHVFDEEALEELKTSIQEVGFLQP 117
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR +D ++++ GERR+RAA+ +P I+R+ + + L A++EN+ R +LNPL
Sbjct: 118 IVVRQLDPEKFELVMGERRWRAAQAVGRETIPAIVRDTKDDAMLRDALLENIHRANLNPL 177
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ E+G T ++ +G+SR ++N +R++ LP +V+ + +S GHAR
Sbjct: 178 EEAAAYQQLLEEFGATHEELARRIGRSRPQISNTIRLMNLPPAVQRRVAAGVLSAGHARA 237
Query: 199 LVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK-KIFEGSREKEKYLTDLE 254
L+S + + A+ IV + ++VR EELV ++ + + LTDL
Sbjct: 238 LLSLDNAEAQEALAERIVREGITVRGAEELVHLALAEEPAKSAAAKRRPKPHAPALTDLA 297
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + +KG+ I++ T + L+ I ++G +
Sbjct: 298 DRLSDRFDTRVKVDIGRSKGKITIEFATVDDLERIVGIIGVGE 340
>gi|152980336|ref|YP_001355325.1| ParB chromosome partitioning protein [Janthinobacterium sp.
Marseille]
gi|151280413|gb|ABR88823.1| ParB chromosome partitioning protein [Janthinobacterium sp.
Marseille]
Length = 299
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 172/299 (57%), Gaps = 11/299 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++ LGRGL AL+G + + IP + + + + + PR + L
Sbjct: 4 KKQKGLGRGLEALLGGASDF----NEAIAAIPGAPSVLQVTDMQAGKYQPRTRMDEGALN 59
Query: 65 DLCQSIKSHGIIQ----PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+L SIK+ G++Q I Y+IIAGERRFRAA++A L+EVPV+++ VD+++
Sbjct: 60 ELAASIKAQGLLQAILVRPIASGNARQRYEIIAGERRFRAAQLAGLTEVPVLVKEVDDEA 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G +LI+++ +T + VG+SRS V+N+LR+L L
Sbjct: 120 TAAMALIENIQREDLNPLEEAQGIHRLIADFNFTHEQAANSVGRSRSAVSNLLRLLNLAK 179
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ +I +GHAR L V + ++LA +V+K+MSVR+ E+LV ++ K
Sbjct: 180 PVQTMLMAGDIDMGHARALLAVDAATQITLANQVVAKRMSVREAEKLVVCSTLEQSGGNK 239
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGEN 296
+EK + +T LE+++S + + IK NKGQ + + + L I + L N
Sbjct: 240 PRANGKEKSRDITRLEEELSDLLASQVEIKLGAKNKGQLVVDFADLDALDGIIAKLRVN 298
>gi|300314062|ref|YP_003778154.1| chromosome partitioning ParB protein [Herbaspirillum seropedicae
SmR1]
gi|300076847|gb|ADJ66246.1| chromosome partitioning ParB protein [Herbaspirillum seropedicae
SmR1]
Length = 304
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 108/307 (35%), Positives = 173/307 (56%), Gaps = 12/307 (3%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K + LGRGL AL+G + + + + + + + PR +
Sbjct: 1 MATLPKKSKGLGRGLDALLGGSSDITEEAQAQAAAQGLPTVM-PVTELQAGKYQPRTRMD 59
Query: 60 SEGLEDLCQSIKSHGIIQPL----IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
L +L SIK G++QP+ I + Y+IIAGERRFRAAK+A L+EVPV++RN
Sbjct: 60 EGALNELAASIKEQGLLQPILIRAIGQKNGRDTYEIIAGERRFRAAKIAGLTEVPVLVRN 119
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
VD++++ +A++EN+QR+DLNPLEEA G +LI+++ +T VG+SRS V+N+LR+
Sbjct: 120 VDDQTTAAMALIENMQREDLNPLEEAQGIHRLITDFAFTHEQAAIAVGRSRSAVSNLLRL 179
Query: 176 LKLPSSVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
L L V+ M+ +I +GHAR +V ++ + LA IV+K+MSVRD E+LV
Sbjct: 180 LNLAKPVQTMLMAGDIDMGHARALLVVDSATQIQLANQIVAKRMSVRDAEKLVTRASA-- 237
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
++ +EK + + LE+++S + ++IK NKGQ I + + L + +
Sbjct: 238 -EQAAKPREGKEKSRDIARLEEELSDLLATQVNIKTGARNKGQLIISFNDLDALDGVITR 296
Query: 293 LGENDFE 299
L E
Sbjct: 297 LRGESVE 303
>gi|253997702|ref|YP_003049766.1| parB-like partition protein [Methylotenera mobilis JLW8]
gi|253984381|gb|ACT49239.1| parB-like partition protein [Methylotenera mobilis JLW8]
Length = 286
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 105/289 (36%), Positives = 175/289 (60%), Gaps = 12/289 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRGL AL+ S+ + S + + + P + PR+Y + L+ L
Sbjct: 5 KGLGRGLDALLAGDMGSVGEAD--------SLMMLKVEQLRPGKYQPRSYMDETALQTLA 56
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK+ GI+QP++VR + + Y+I+AGERR+RA++ A L EVPV++R + ++S+L +A++
Sbjct: 57 DSIKAQGIMQPILVRQLTDEQYEIVAGERRWRASQRAGLLEVPVLVREIADESALAMALI 116
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR++LNPLEEA G ++LI E+ T VG+SR V+N+LR+L L +V+EM+
Sbjct: 117 ENIQRENLNPLEEAQGIKRLIDEFAMTHEKAADAVGRSRVAVSNLLRLLTLTGAVQEMLM 176
Query: 188 KEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
++ +GHAR LV + + LA+ IV +++SVR+ E LV++ + KK+ +E
Sbjct: 177 HGKLDMGHARALVGLDGAQQVMLAEQIVQQRLSVREAEALVKKVAEQPAAAKKVPPTVKE 236
Query: 246 KEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + L++ +S ++G ++SIK N G I Y +QL I S +
Sbjct: 237 -DADVIRLQETLSDRLGASVSIKASANGAGVLKINYTNLDQLDDIISRI 284
>gi|240168401|ref|ZP_04747060.1| chromosome partitioning protein ParB [Mycobacterium kansasii ATCC
12478]
Length = 326
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 99/325 (30%), Positives = 165/325 (50%), Gaps = 28/325 (8%)
Query: 1 MSNNYSKRR-LGRGLAALIGEVNQSIDS-------------------PEKKTETIPESQD 40
M+ ++ LGRGLA+LI +S P +
Sbjct: 1 MTQPSRRKGGLGRGLASLIPTGPADGESGPSFGPRMGSATADVVIGGPALDASPMGAVYR 60
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG----LYKIIAGER 96
I+ I NP PR F+ E L++L SI+ G++QP++VRAI+ Y+I+ GER
Sbjct: 61 EIAPSDIEANPRQPRQVFDQEALQELVHSIREFGLLQPIVVRAIEATPSGAHYQIVMGER 120
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RAA+ A L+ +P I+R + S L A++EN+ R LNPLEEA Y+QL+ E+G T +
Sbjct: 121 RWRAAQEAGLATIPAIVRETGDDSLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHD 180
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS----TSDPLSLAQVI 212
++ + +G+SR + N++R+LKLP V+ + +S GHAR L+S LA I
Sbjct: 181 ELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASRI 240
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
V++ +SVR TEE V + L D+ +++S+ +++
Sbjct: 241 VAEGLSVRATEEAVTLANRAGTSTPTPPRRKPIHMPGLQDVAERLSTAFDTRVTVSLGKR 300
Query: 273 KGQFCIKYETNEQLKIICSLLGEND 297
KG+ +++ + + L+ I L+ + +
Sbjct: 301 KGKIVVEFGSVDDLQRIIGLMTDAN 325
>gi|169633364|ref|YP_001707100.1| chromosome partitioning protein [Acinetobacter baumannii SDF]
gi|169796152|ref|YP_001713945.1| chromosome partitioning protein [Acinetobacter baumannii AYE]
gi|213157113|ref|YP_002319158.1| chromosome partitioning protein ParB [Acinetobacter baumannii
AB0057]
gi|215483606|ref|YP_002325827.1| Chromosome partitioning protein parB [Acinetobacter baumannii
AB307-0294]
gi|239502204|ref|ZP_04661514.1| Chromosome partitioning protein parB [Acinetobacter baumannii
AB900]
gi|260555202|ref|ZP_05827423.1| chromosome partitioning protein parB [Acinetobacter baumannii ATCC
19606]
gi|301345169|ref|ZP_07225910.1| Chromosome partitioning protein parB [Acinetobacter baumannii
AB056]
gi|301511293|ref|ZP_07236530.1| Chromosome partitioning protein parB [Acinetobacter baumannii
AB058]
gi|301595463|ref|ZP_07240471.1| Chromosome partitioning protein parB [Acinetobacter baumannii
AB059]
gi|332851806|ref|ZP_08433731.1| ParB-like protein [Acinetobacter baumannii 6013150]
gi|332865814|ref|ZP_08436598.1| ParB-like protein [Acinetobacter baumannii 6013113]
gi|169149079|emb|CAM86956.1| chromosome partitioning protein [Acinetobacter baumannii AYE]
gi|169152156|emb|CAP01058.1| chromosome partitioning protein [Acinetobacter baumannii]
gi|213056273|gb|ACJ41175.1| chromosome partitioning protein ParB [Acinetobacter baumannii
AB0057]
gi|213987035|gb|ACJ57334.1| Chromosome partitioning protein parB [Acinetobacter baumannii
AB307-0294]
gi|260411744|gb|EEX05041.1| chromosome partitioning protein parB [Acinetobacter baumannii ATCC
19606]
gi|332729813|gb|EGJ61148.1| ParB-like protein [Acinetobacter baumannii 6013150]
gi|332735026|gb|EGJ66111.1| ParB-like protein [Acinetobacter baumannii 6013113]
Length = 295
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 179/299 (59%), Gaps = 15/299 (5%)
Query: 1 MSNNYSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR L GRGL AL+G + + E + I + + + PR +
Sbjct: 1 MS--IKKRGLAKGRGLDALLGSIQKEKLQLEAQA-LDHGQLKQIDVKLLKRGEYQPRRFI 57
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI+ HG++QP+++R +D+ Y+IIAGERR+RAA++A L+E+P I+R++
Sbjct: 58 HEHDLQELASSIEKHGVMQPIVIRPVDDEAHPYEIIAGERRWRAAQIAGLTEIPAIVRDL 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+++ ++ +A++EN+QR+DLNP+++AL ++ E+G + +I VGK+R+ V+N+LR+L
Sbjct: 118 NDQVAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIADTVGKARTTVSNLLRLL 177
Query: 177 KLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L ++E +++ ++ +GHAR ++ + L +A++++ K +SVR TE+LV++ +
Sbjct: 178 SLADDIKEFMQQGQLDMGHARAILTLKGKEQLEVAKIVIEKGLSVRQTEQLVRDWNE--- 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
K + + L +K+S + G N+ I H KG+ I Y + ++L I ++
Sbjct: 235 --PKQEKEKAPVAPDIEQLTQKLSERFGANVKIDHNQKGKGKLVIHYHSLDELDGILNI 291
>gi|218781554|ref|YP_002432872.1| parB-like partition protein [Desulfatibacillum alkenivorans AK-01]
gi|218762938|gb|ACL05404.1| parB-like partition protein [Desulfatibacillum alkenivorans AK-01]
Length = 296
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 146/296 (49%), Gaps = 9/296 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ + LGRGL A + E + + PE+ + IVPN PR F E
Sbjct: 7 AKKTKRNVLGRGLDAFLPEAVST-------AQESPENYFECDVDDIVPNQFQPRTIFSQE 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L +L +SI G+IQPL+VR LY++IAGERR RA+KMA LS VPVI+ ++
Sbjct: 60 ELAELSESIAEQGVIQPLVVRKNQQDLYELIAGERRLRASKMAGLSRVPVIVVEASDEKV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
L++ IVEN+QR+DLNPLEE Y +L+ E TQ ++ VGK RS VAN LR+ LP
Sbjct: 120 LQMTIVENIQREDLNPLEECQAYHRLMEECSLTQEEVAKRVGKKRSTVANFLRLKNLPRL 179
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+++ IR+ IS+GHAR ++ + + K+ + +
Sbjct: 180 IQDGIRENVISMGHARAILGLEESPDQLTAYRETVKKALSVRATESLVNRLKKAKDAKPK 239
Query: 242 GSREKEKYL--TDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + L ++S + G + I +G I++ + L I +LL
Sbjct: 240 PTEPDSNAIYMNHLCDELSRQFGTKVEINKNGKRGALKIEFYNEQDLDRIVTLLKN 295
>gi|118586488|ref|ZP_01543932.1| partition protein ParB [Oenococcus oeni ATCC BAA-1163]
gi|118433052|gb|EAV39774.1| partition protein ParB [Oenococcus oeni ATCC BAA-1163]
Length = 295
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 111/303 (36%), Positives = 176/303 (58%), Gaps = 17/303 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRN 56
M+N KR LGRG+ AL + ++ + S IS+ S+ NP+ PR
Sbjct: 1 MAN---KRGLGRGIDALFSDEEDKKEAQVVEKVAPKKDDRNSVSTISLSSLKVNPYQPRK 57
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
F+ L +L +S+K G+IQPLIVRA Y+I+AGERRFRAAK+A L+EVPVI++++
Sbjct: 58 TFDEASLSELAESLKQSGVIQPLIVRAHG-KNYQIVAGERRFRAAKLAKLTEVPVIVKDL 116
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ + +E+AI+EN+QR+DLNP+EEA G + E TQ + +GKSR+ VAN LR+L
Sbjct: 117 SDSAMMELAIIENLQREDLNPIEEAQGINSYMKELALTQAQVAEKLGKSRAGVANTLRLL 176
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKK 233
LP+ V++++ ++S+GHAR L+ + A IV + +SVR EELV+ +
Sbjct: 177 NLPTEVQQLMIDGKLSMGHARALLGLDSQPDMLLLAHRIVKEGLSVRQVEELVR--KSAN 234
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++K +G + Y ++E ++ K +S+ + + I + ++L I +LL
Sbjct: 235 PEKKSSNQGRKSTNIYAEEVEHQLEDKFSTKVSLSKK----KIEINFANEDELDRILTLL 290
Query: 294 GEN 296
G N
Sbjct: 291 GVN 293
>gi|20809119|ref|NP_624290.1| transcriptional regulator [Thermoanaerobacter tengcongensis MB4]
gi|254479398|ref|ZP_05092731.1| ParB-like nuclease domain family protein [Carboxydibrachium
pacificum DSM 12653]
gi|20517798|gb|AAM25894.1| predicted Transcriptional regulator [Thermoanaerobacter
tengcongensis MB4]
gi|214034667|gb|EEB75408.1| ParB-like nuclease domain family protein [Carboxydibrachium
pacificum DSM 12653]
Length = 287
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 111/291 (38%), Positives = 176/291 (60%), Gaps = 16/291 (5%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LGRGL ALI E E + + + I I PN + PR +F E L +L
Sbjct: 4 KKGLGRGLQALIPEYR----------EEEAQGVETVQIDKIFPNQYQPRKHFNEESLREL 53
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SIK HGI+QPL+VR G Y+++AGERR+RAAK+A L EVPVIIR++D+ +EIA+
Sbjct: 54 ADSIKEHGIVQPLVVRRQGTG-YQLVAGERRWRAAKIAGLKEVPVIIRDLDDLQVMEIAL 112
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLNP+EEA Y+ L+ ++ TQ +I +GKSRS +AN +R+L L V+EM+
Sbjct: 113 IENLQREDLNPIEEAKAYKTLMEQFNLTQEEIAKKIGKSRSVIANSIRLLNLDDRVQEML 172
Query: 187 RKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ +I++GHA+ ++ S + A+ IV ++VR+TE+LV+ + + ++ K
Sbjct: 173 IEGKITVGHAKVILSITSKTLQYEAAKKIVEDGLNVRETEKLVKTLLS-RSEKTKEKRKD 231
Query: 244 REKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+ + ++ ++E + S +G + I + KG I+Y E L I ++
Sbjct: 232 KRIDVHIREIEDNLCSLLGTKVQILQKGKEKGIIQIEYYGEEDLTRILDII 282
>gi|330447284|ref|ZP_08310934.1| parB-like partition s domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491475|dbj|GAA05431.1| parB-like partition s domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 299
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 94/303 (31%), Positives = 177/303 (58%), Gaps = 14/303 (4%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKT------ETIPESQDCISIHSIVPNPHNPRN 56
N++KR LG+GL AL+ + E +++ ++ + PR
Sbjct: 1 MNFNKRGLGKGLDALLSTSAVAQAKQHNDQATPAVEEQTDGELRELAVDALKSGQYQPRK 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
E L +L +SI++ GIIQP++VR + N ++IIAGERR++AAK+A L++VP +++ V
Sbjct: 61 SMTEETLAELAESIRAQGIIQPIVVRRLVNNDFEIIAGERRWQAAKLAGLTKVPCLVKAV 120
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D+++++ IA++EN+QR+DLN +EEA+ +L E+ T I VGKSR+ V+N+LR+
Sbjct: 121 DDRATMAIALIENIQREDLNVIEEAVALARLQQEFSLTHQQIADAVGKSRAAVSNLLRLN 180
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKE 234
+L V++++ ++++ +GHAR L+S + AQ IV+ ++VR+ E+LV+ N
Sbjct: 181 QLSEPVKQLVEQKKLEMGHARALLSLDEAQQLSTAQKIVNNLLTVREAEKLVKTLLN--- 237
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
+ + + + L+ +++ ++G ++I KG+ I ++ ++L+ I ++L
Sbjct: 238 --PSAPKSPKPVSEQVALLQNRLTERLGTKVAINQTKTGKGKLVINFDQQDKLEQIIAML 295
Query: 294 GEN 296
N
Sbjct: 296 ERN 298
>gi|221135169|ref|ZP_03561472.1| ParB family protein [Glaciecola sp. HTCC2999]
Length = 296
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 99/298 (33%), Positives = 165/298 (55%), Gaps = 13/298 (4%)
Query: 6 SKRRLGRGLAALIGE-----VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+ LGRGL AL+ N S K E + I + P + PR
Sbjct: 4 KSKGLGRGLDALLTSNRTVAPNTVSQSKIKSGEPTDGDLRHLPIDCLQPGKYQPRKDMSP 63
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI++ GIIQP++VR++ N ++IIAGERR+RAAK+A L EVP +I+ V +++
Sbjct: 64 DALEELSTSIQAQGIIQPIVVRSVGNNKFEIIAGERRWRAAKLALLHEVPCLIKEVADEA 123
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ IA++EN+QR+DLN +EEA ++L+ E+ T ++ VGKSR+ V N+LR+ L
Sbjct: 124 AVAIALIENIQREDLNAMEEAQALDRLMKEFELTHQEVAIAVGKSRTTVTNLLRLNLLND 183
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++++ +I +GHARTL + + + + K+SVR+TE V++ N
Sbjct: 184 EVKKLLEYGDIEMGHARTLLALESDLQKEAGKHVADNKLSVRETENYVRKLLN-----PP 238
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ S+ + L+ +++ ++G + I ++ KG+ I + EQL I E
Sbjct: 239 QEKESKSVVPDVEQLQTRLAEQIGAQVQINANKKGKGKVVINFSDLEQLDGILGFFNE 296
>gi|160882052|ref|YP_001561020.1| parB-like partition protein [Clostridium phytofermentans ISDg]
gi|160430718|gb|ABX44281.1| parB-like partition protein [Clostridium phytofermentans ISDg]
Length = 295
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 110/292 (37%), Positives = 176/292 (60%), Gaps = 7/292 (2%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LG+GL +LI + + K + + I+I+ I PN PR++F+ + L +L
Sbjct: 4 KKGLGKGLDSLIVDKIDKSEPKVKGNQENVSRETFININQIEPNKSQPRSHFDEDALHEL 63
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SIK HG+IQPLIV+ + Y+IIAGERR+RA+++A L E+PVI++ + LEIA+
Sbjct: 64 ADSIKLHGVIQPLIVQKKGDR-YEIIAGERRWRASRIAGLKEIPVIVKEFTKQQVLEIAL 122
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLN +EEAL YE+LISE+ Q+++ VGKSR V N +R+LKL V++M+
Sbjct: 123 IENIQREDLNAIEEALAYEKLISEFKLKQDEVAERVGKSRVSVTNSMRLLKLDKRVQQMV 182
Query: 187 RKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ IS GHAR + LA + +K+SVR+TE+LV+ +K +K +
Sbjct: 183 IDDMISEGHARALLAIADGETQYQLATKVFDEKLSVRETEKLVKHISK--DKPEKEIAAT 240
Query: 244 REKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLG 294
R+ ++E ++ + G + I + NNKG+ I+Y + + + I L+
Sbjct: 241 RDDNFIYKEIEDRMKAIFGSKVEIRRGNNNKGKIEIEYYSQDDFERILDLIN 292
>gi|296330026|ref|ZP_06872510.1| site-specific DNA-binding protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676750|ref|YP_003868422.1| site-specific DNA-binding protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296153065|gb|EFG93930.1| site-specific DNA-binding protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414994|gb|ADM40113.1| site-specific DNA-binding protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 282
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 105/293 (35%), Positives = 170/293 (58%), Gaps = 17/293 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL + + E+ + I + + PNP+ PR +F+ E L +L
Sbjct: 3 KGLGKGINALF-----------NQVDLSEETVEEIKVADLRPNPYQPRKHFDDEALAELK 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+S+ HGI+QPLIVR Y I+AGERRFRAAK+A L VP I+R + EIA++
Sbjct: 52 ESVLQHGILQPLIVRK-SLKGYDIVAGERRFRAAKLAGLDTVPAIVRELSEALMREIALL 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ TQ + +GKSR H+AN LR+L LP +++++I
Sbjct: 111 ENLQREDLSPLEEAQAYDSLLQHLDLTQEQLAKRLGKSRPHIANHLRLLTLPENIQQLIA 170
Query: 188 KEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+S+GH RTL + + L Q +++++++VR E+L+Q+ + + K +
Sbjct: 171 DGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNENVSRETK--KKEP 228
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
K+ L + E + + G ++IK + KG+ I++ +NE L I LL E +
Sbjct: 229 VKDSVLKERESYLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERE 281
>gi|160914905|ref|ZP_02077119.1| hypothetical protein EUBDOL_00913 [Eubacterium dolichum DSM 3991]
gi|158433445|gb|EDP11734.1| hypothetical protein EUBDOL_00913 [Eubacterium dolichum DSM 3991]
Length = 295
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 105/301 (34%), Positives = 173/301 (57%), Gaps = 9/301 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI--DSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ S RLG+GL+A+ GE S+ D + K+E +++ +++ + PNP+ PR F
Sbjct: 1 MAKKESNPRLGKGLSAIFGEDVNSVLEDIQQGKSEVHSDAKFEVAVSEVKPNPYQPRKVF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ E +++L SI+ HG+ P++V+ Y++I GERR RAAK+A L +P I+ + D+
Sbjct: 61 DDEKIQELAHSIQQHGVFTPILVKKT-IKGYELITGERRLRAAKLAGLKNIPAILMDFDD 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +EIA++EN+QR+DLN +EEA GYE+LI + GYTQ ++ +GKSR HVAN+LR+L+L
Sbjct: 120 QQMMEIALLENIQREDLNAIEEAQGYEKLIKKLGYTQEELAKRIGKSREHVANMLRLLRL 179
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+E + E+S+GH R L++ +D + + E K + K
Sbjct: 180 PKKVQEHVTNGELSMGHVRALLALNDEKQMEEAAKKAIK--EGMSVRAIEAYVKALQTPK 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
+EK+ LT +E ++ ++ + + + Q I Y+ N L I LLG +
Sbjct: 238 PQTVKKEKDVNLTSVENRLQNRFQTKVQVSEK----QITIHYKGNNDLNRILELLGGIEE 293
Query: 299 E 299
E
Sbjct: 294 E 294
>gi|325955689|ref|YP_004239349.1| parB-like partition protein [Weeksella virosa DSM 16922]
gi|323438307|gb|ADX68771.1| parB-like partition protein [Weeksella virosa DSM 16922]
Length = 298
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 93/294 (31%), Positives = 154/294 (52%), Gaps = 1/294 (0%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ RLGRGL+AL+ + + ++ + + + I + IV NP PR F+
Sbjct: 1 MAKPNKNNRLGRGLSALLKDEPNVNSASDEGAKNLVGNILEIDLDKIVANPWQPRTKFDK 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +EDL SI+S G+IQP+ VR G Y++I+GERRFRA+++A +P +R +++
Sbjct: 61 QSMEDLVTSIESLGVIQPITVRKTIQGTYELISGERRFRASQLAGKDTIPAYVRLANDQE 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A+VEN+QR+DL+ +E AL Y QLI + TQ ++ VGK RS + N LR+LKL
Sbjct: 121 MLEMALVENIQRQDLDAIEIALSYRQLIEDVQLTQEELSKRVGKDRSSITNYLRLLKLDP 180
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
++ IR IS+GH R L++ + + E + KE ++K+
Sbjct: 181 IIQTGIRDGMISMGHGRALIAVENLDQQFAIYERIIKDNLSVRETENLIKSLKEDKQKVN 240
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ E I + + IK +N KG+ + + ++E + + L
Sbjct: 241 KTVAELPAQYQVALDSIGESLKTKVEIKRAKNGKGKIILNFTSDEDFERLRKFL 294
>gi|309780417|ref|ZP_07675167.1| stage 0 sporulation protein J [Ralstonia sp. 5_7_47FAA]
gi|308920810|gb|EFP66457.1| stage 0 sporulation protein J [Ralstonia sp. 5_7_47FAA]
Length = 303
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 184/300 (61%), Gaps = 13/300 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + +++ ++ + + + + P + PR +
Sbjct: 1 MST-MKKKGLGRGLEALLGSPAEIVEAARQE-----GAPTVLKLEQMQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID----NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI++ G++QP++VR ++ Y+IIAGERRFRA+++A L+EVPV++++V
Sbjct: 55 GALQELAASIRAQGLMQPILVRKVESDGAKPKYEIIAGERRFRASRLAGLTEVPVLVKDV 114
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++S+ +A++EN+QR+DLNPLEEA G +L+ E+ +T VG+SRS V+N+LR+L
Sbjct: 115 PDESAAAMALIENIQREDLNPLEEAQGIARLVREFQFTHEQAAESVGRSRSAVSNLLRLL 174
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ M+ ++ +GHAR L V + ++LA IV+K++SVR+TE+LV E
Sbjct: 175 NLAQPVQTMLMAGDLDMGHARALLAVDGATQITLANQIVNKRLSVRETEKLVASTLKPFE 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ +G + + + LE++++ ++GL + IK +GQ +++ + ++ + + L
Sbjct: 235 LKSLKQKGGHQGGRDVARLEEELADQLGLGVQIKLAAKGRGQLTVQFSSLDEFDGLLARL 294
>gi|184157919|ref|YP_001846258.1| transcriptional regulator [Acinetobacter baumannii ACICU]
gi|332872756|ref|ZP_08440722.1| ParB-like protein [Acinetobacter baumannii 6014059]
gi|183209513|gb|ACC56911.1| predicted transcriptional regulator [Acinetobacter baumannii ACICU]
gi|322508238|gb|ADX03692.1| Chromosome partitioning protein [Acinetobacter baumannii 1656-2]
gi|323517864|gb|ADX92245.1| transcriptional regulator [Acinetobacter baumannii TCDC-AB0715]
gi|332739053|gb|EGJ69914.1| ParB-like protein [Acinetobacter baumannii 6014059]
Length = 295
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 178/299 (59%), Gaps = 15/299 (5%)
Query: 1 MSNNYSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR L GRGL AL+G + + E + I + + + PR +
Sbjct: 1 MS--IKKRGLAKGRGLDALLGSIQKEKLQLEAQA-LDHGQLKQIDVKLLKRGEYQPRRFI 57
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI+ HG++QP+++R +D+ Y+IIAGERR+RAA++A L+E+P I+R++
Sbjct: 58 HEHDLQELASSIEKHGVMQPIVIRPVDDEAHPYEIIAGERRWRAAQIAGLTEIPAIVRDL 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+++ ++ +A++EN+QR+DLNP+++AL ++ E+G + +I VGK+R+ V+N+LR+L
Sbjct: 118 NDQVAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIADTVGKARTTVSNLLRLL 177
Query: 177 KLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L ++E +++ ++ +GHAR ++ + L +A++++ K +SVR TE+LV++
Sbjct: 178 SLADDIKEFMQQGQLDMGHARAILTLKGKEQLEVAKIVIEKGLSVRQTEQLVRDWSE--- 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
K + + L +K+S + G N+ I H KG+ I Y + ++L I ++
Sbjct: 235 --PKQEKEKAPVAPDIEQLTQKLSERFGANVKIDHNQKGKGKLVIHYHSLDELDGILNI 291
>gi|28209874|ref|NP_780818.1| chromosome partitioning protein parB [Clostridium tetani E88]
gi|28202309|gb|AAO34755.1| chromosome partitioning protein parB [Clostridium tetani E88]
Length = 285
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 106/295 (35%), Positives = 169/295 (57%), Gaps = 13/295 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K LG+GL ALI + + E E ++ + I SI N + PR F+
Sbjct: 1 MS---KKSVLGKGLGALIPD---------EIQEKEIERKNTLPIESIKSNDNQPRRSFDE 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E + +L QSIK GIIQP+IV+ I N Y+I+AGERR+RAAK+A L EVPVII+ + N+
Sbjct: 49 EKISELSQSIKEFGIIQPIIVKKIANGTKYEIVAGERRWRAAKLAGLEEVPVIIKELSNR 108
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LEI+++EN+QR+DLNP+EE+ Y++L++ + TQ D+ +GKSR + N LR+L L
Sbjct: 109 EVLEISLIENIQREDLNPIEESKAYQELLNSFNLTQGDLSKKLGKSRVTITNSLRLLNLD 168
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ V+EM+ +E I+ GH R L++ D ++ ++ E + + +K +
Sbjct: 169 ARVQEMLIRELITEGHGRALLAIKDINIQFEIAQKIIINKLSVRETERVVKSLNKKEETK 228
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ Y D++ ++ + I ++NNKG+ I+Y + E L+ I +L
Sbjct: 229 DSIVSKNNPYYEDIKNRLEDFFQTKVKIDNKNNKGKIEIEYYSEEDLQRIIDILN 283
>gi|50085456|ref|YP_046966.1| chromosome partitioning protein [Acinetobacter sp. ADP1]
gi|49531432|emb|CAG69144.1| chromosome partitioning protein [Acinetobacter sp. ADP1]
Length = 296
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 93/294 (31%), Positives = 179/294 (60%), Gaps = 13/294 (4%)
Query: 6 SKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
KR L GRGL AL+G + + E + I ++ + + PR + + + L
Sbjct: 4 KKRGLAKGRGLDALLGSIQKEKLQLEAQA-IDHGQLKQIDVNLLKRGEYQPRRFIQEQDL 62
Query: 64 EDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
++L SI+ HG++QP+++R + Y+IIAGERR+RAA++A L EVP I+R+++++ +
Sbjct: 63 KELAASIEKHGVMQPIVIRPIQDEQYAYEIIAGERRWRAAQLAGLKEVPAIVRDLNDQVA 122
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+ +A++EN+QR+DLNP+++AL ++ E+G + +I VGK+R+ V+N+LR+L L
Sbjct: 123 IALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIAETVGKARTTVSNLLRLLSLDDV 182
Query: 182 VREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+++ +++ ++ +GHAR ++ D +++A+V++ K +SVR TE+LV++ + K
Sbjct: 183 IKDFMQEGQLDMGHARAILALKAKDQIAIAKVVIEKNLSVRQTEQLVRDWNA-----PKQ 237
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSL 292
+ + + L ++S + G N+ I H KG+ I+Y + ++L I ++
Sbjct: 238 EKPKAQVAPDIEQLTHRLSERFGANVKIDHNKQGKGKLVIQYHSLDELDGILNI 291
>gi|256421073|ref|YP_003121726.1| parB-like partition protein [Chitinophaga pinensis DSM 2588]
gi|256035981|gb|ACU59525.1| parB-like partition protein [Chitinophaga pinensis DSM 2588]
Length = 311
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 94/299 (31%), Positives = 162/299 (54%), Gaps = 8/299 (2%)
Query: 3 NNYSKRRLGRGLAALIG----EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
N K LG+G+ +L+ ++ Q+ + ++ + I + + NP PR F
Sbjct: 8 NPNKKEALGKGIRSLLQNIDTDLKQTTSALGEQVVAQATGMERIPLDQVEINPKQPRRDF 67
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ + L++L SI H +IQP+ V I Y++IAGERR RA+KMA L ++P IR ++
Sbjct: 68 DEKALQELSMSISLHDVIQPITVSRIGAKKYQLIAGERRLRASKMAGLKDIPAYIRQAND 127
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ LE+A++EN+QR++LN +E L Y++L+ E TQ + +GK RS V N +R+LKL
Sbjct: 128 QELLELALLENLQRENLNAIEIGLSYKRLMEECVLTQEQVADRMGKERSTVTNYIRLLKL 187
Query: 179 PSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P ++ +R +IS+GHAR L+ + L + I+ +SVR TEELV++ + +
Sbjct: 188 PPDIQVAVRNGQISMGHARALIAVENVEKQLFVFNEIMRDGLSVRQTEELVRKAASLDKN 247
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
K G +E +++ + + +N KG I++ ++E+L I +
Sbjct: 248 NIKKAAGKITLPPAYQKIEDNLATHFATKVKLDRSKNGKGSVTIEFYSDEELDSILEKI 306
>gi|193077187|gb|ABO11979.2| chromosome partitioning protein [Acinetobacter baumannii ATCC
17978]
Length = 295
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 179/299 (59%), Gaps = 15/299 (5%)
Query: 1 MSNNYSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR L GRGL AL+G + + E + I + + + PR +
Sbjct: 1 MS--IKKRGLAKGRGLDALLGSIQKEKLQLEAQA-LDHGQLKQIDLKLLKRGEYQPRRFI 57
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI+ HG++QP+++R +D+ Y+IIAGERR+RAA++A L+E+P I+R++
Sbjct: 58 HEHDLQELASSIEKHGVMQPIVIRPVDDEAHPYEIIAGERRWRAAQIAGLTEIPAIVRDL 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+++ ++ +A++EN+QR+DLNP+++AL ++ E+G + +I VGK+R+ V+N+LR+L
Sbjct: 118 NDQVAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIADTVGKARTTVSNLLRLL 177
Query: 177 KLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L ++E +++ ++ +GHAR ++ + L +A++++ K +SVR TE+LV++ +
Sbjct: 178 SLADDIKEFMQQGQLDMGHARAILTLKGKEQLEVAKIVIEKGLSVRQTEQLVRDWNE--- 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
K + + L +K+S + G N+ I H KG+ I Y + ++L I ++
Sbjct: 235 --PKQEKEKAPVAPDIEQLTQKLSERFGANVKIDHNQKGKGKLVIHYHSLDELDGILNI 291
>gi|91777100|ref|YP_546856.1| chromosome segregation DNA-binding protein [Methylobacillus
flagellatus KT]
gi|91711087|gb|ABE51015.1| chromosome segregation DNA-binding protein [Methylobacillus
flagellatus KT]
Length = 286
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 97/293 (33%), Positives = 179/293 (61%), Gaps = 16/293 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRGL AL+ + +T + ++ + + + + P + PR + + L L
Sbjct: 5 KGLGRGLDALLAG--------DAETVSANDAPNTLLVSQMQPGKYQPRTHMDQASLASLA 56
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SI++ GI+QP++VR + G Y+IIAGERR+RAAK+A L+EVPV++R++ ++S+L +A++
Sbjct: 57 DSIRAQGIMQPILVREVAAGKYEIIAGERRWRAAKLAGLTEVPVLVRDIPDESALAMALI 116
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR++LNPLEEA G ++LI+E+ T VG+SRS V N+LR+ L + V+EM+
Sbjct: 117 ENIQRENLNPLEEAQGIQRLINEFNMTHQAAADAVGRSRSVVTNLLRLQNLSNKVQEMLM 176
Query: 188 KEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ ++ +GHAR L + ++ + A++IV K++SVR+ E+LV++ + + ++
Sbjct: 177 EGQLDMGHARALLSLPDANQVMAAELIVQKQLSVREAEKLVKQLSA-----EPQQKPAKV 231
Query: 246 KEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEND 297
++ + L++ +S +G + I+ + G+ I Y + +QL + +
Sbjct: 232 VDRDVLRLQEDLSELLGATVEIRAGKKGNGEVKIHYGSLDQLDALIERFKGGN 284
>gi|311070637|ref|YP_003975560.1| site-specific DNA-binding protein [Bacillus atrophaeus 1942]
gi|310871154|gb|ADP34629.1| site-specific DNA-binding protein [Bacillus atrophaeus 1942]
Length = 279
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 102/291 (35%), Positives = 156/291 (53%), Gaps = 16/291 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G AL E+ + I I + PNP+ PR F+ E L +L
Sbjct: 3 KGLGKGFNALF--------------NVSEETVEEIKISELRPNPYQPRKTFDDESLAELK 48
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+S+ HGI+QP+IVR Y I+AGERRFRAAK+A L VP I+R + EIA++
Sbjct: 49 ESVLQHGILQPIIVRK-SLKGYDIVAGERRFRAAKLAGLDTVPAIVRELSESLMREIALL 107
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEAL Y+ L+ TQ + +GKSR H+AN LR+L LP ++++I
Sbjct: 108 ENLQREDLSPLEEALAYDSLLKHLDVTQEQLAKRLGKSRPHIANHLRLLTLPEEIQQLIA 167
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN-KKEKRKKIFEGSREK 246
+S+GH RTL+ + L ++ + +L Q ++ ++ + K
Sbjct: 168 DGTLSMGHGRTLLGLKNKNKLQPLVQKVIAEQLNVRQLEQIIQQLNQDVSRETKKKEPPK 227
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ L + E + G ++IK + KG+ I++ +NE L I LL E D
Sbjct: 228 DAVLKERESYLQDYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILDLLAEKD 278
>gi|256851848|ref|ZP_05557236.1| chromosome partitioning protein [Lactobacillus jensenii 27-2-CHN]
gi|260661891|ref|ZP_05862801.1| chromosome partitioning protein [Lactobacillus jensenii 115-3-CHN]
gi|282931974|ref|ZP_06337438.1| stage 0 sporulation protein J [Lactobacillus jensenii 208-1]
gi|297205472|ref|ZP_06922868.1| chromosome partitioning protein SpoOJ [Lactobacillus jensenii
JV-V16]
gi|256615806|gb|EEU20995.1| chromosome partitioning protein [Lactobacillus jensenii 27-2-CHN]
gi|260547360|gb|EEX23340.1| chromosome partitioning protein [Lactobacillus jensenii 115-3-CHN]
gi|281303916|gb|EFA96054.1| stage 0 sporulation protein J [Lactobacillus jensenii 208-1]
gi|297150050|gb|EFH30347.1| chromosome partitioning protein SpoOJ [Lactobacillus jensenii
JV-V16]
Length = 302
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 106/297 (35%), Positives = 165/297 (55%), Gaps = 11/297 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ K LGRG+ AL + + TE + +++ I PNP+ PR F+ +
Sbjct: 8 NEPRKKGGLGRGIEALFEDTPTQVVQSVDGTE----EVEELNLEDIRPNPYQPRKNFDDK 63
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L SIK +G+ QP+IVR Y+IIAGERRFRA+K+A +P I+R+ D
Sbjct: 64 SLKELSDSIKENGVFQPIIVRK-SLDGYEIIAGERRFRASKLAKKPTIPAIVRDFDEAQM 122
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A++EN+QR+DL+PLEEA YE L G TQ ++ +GKSR ++AN LR+L LP
Sbjct: 123 MEVAVLENLQREDLSPLEEAQAYEMLQKNLGLTQEEVSKRMGKSRPYIANYLRLLTLPKK 182
Query: 182 VREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++++ E+S+G ART L LA+ +V + + VR E LV + K K K
Sbjct: 183 AKKLLQHGELSMGQARTLLGLKDKDKIDDLAKKVVKEGIPVRKLEALVSAMNEKANKTSK 242
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
K ++ E ++S+K G +SI + KG I + + + L I ++LG
Sbjct: 243 --NDKIRKSAFIRASESRLSTKFGSPVSISESKKGKGHLSIDFSSTDDLNRILTMLG 297
>gi|312888464|ref|ZP_07748037.1| parB-like partition protein [Mucilaginibacter paludis DSM 18603]
gi|311299041|gb|EFQ76137.1| parB-like partition protein [Mucilaginibacter paludis DSM 18603]
Length = 303
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 101/302 (33%), Positives = 170/302 (56%), Gaps = 10/302 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP-----ESQDCISIHSIVPNPHNPR 55
MS + LGRGL AL+ + + + + + P S + I I I NP PR
Sbjct: 1 MS-AEKRNALGRGLGALLNNSEDKVPNTKGQVASSPQVNDMGSVNEIKISEIEVNPFQPR 59
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
F+ + L +L SIK G+IQP+ VR ++ Y++I+GERR RA+K+A L ++P IR
Sbjct: 60 TEFDEQALIELADSIKLQGLIQPITVRKVNAHSYQLISGERRLRASKLAGLVQIPAYIRT 119
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+++ LE+A++EN+QR++LN +E AL ++++I E Q+++G V K+RS V N LR+
Sbjct: 120 ANDQQMLEMALIENIQRENLNAIEVALSFQRMIDECNLKQDELGERVSKNRSTVTNYLRL 179
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV---SKKMSVRDTEELVQEQDNK 232
LKLP ++ IR +I++GHA+ L++ +DP+S + +SVR EE+V+E +
Sbjct: 180 LKLPPVIQASIRDGQITMGHAKALITMNDPVSQLYIHQQILQGGLSVRKVEEMVREMQQQ 239
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICS 291
+ KK + + ++ ++SK G + +K KG I + + + L I
Sbjct: 240 RPSAKKDNKKPEGLTFQVQKIQDDLASKFGARVKLKMSDQGKGAIEIPFLSQDDLGRILE 299
Query: 292 LL 293
+L
Sbjct: 300 ML 301
>gi|256381068|ref|YP_003104728.1| parB-like partition protein [Actinosynnema mirum DSM 43827]
gi|255925371|gb|ACU40882.1| parB-like partition protein [Actinosynnema mirum DSM 43827]
Length = 331
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 95/319 (29%), Positives = 157/319 (49%), Gaps = 26/319 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPES---------------------- 38
M+ K LGRGLAALI ++
Sbjct: 1 MTE-QRKGGLGRGLAALIPSGPPPGAPAPLRSVPSGAPARPATEEPPAAAPPPVEVAGAV 59
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ + SI NP PR+ F+ + L +L SI+ G++QP++VR + G Y+++ GERR+
Sbjct: 60 YQELPVTSIRTNPKQPRHVFDEDALHELEHSIREFGLMQPIVVRMLKPGEYELVMGERRW 119
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA ++A L +P I+R + + L A++EN+ R LNPLEEA Y+QL+ E+ T ++
Sbjct: 120 RATQLAGLKTIPAIVRQTADDAMLRDALLENIHRVQLNPLEEAAAYQQLLQEFDVTHEEL 179
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSK 215
+G+SR V N +R+LKLP V+ + +S GHAR L+ LA IV++
Sbjct: 180 AERIGRSRPVVTNTIRLLKLPLPVQRRVAAGVLSAGHARALLGLDDPGAQEDLATRIVAE 239
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQ 275
MSVR TEE V + + K + + L +L +++S + ++ KG+
Sbjct: 240 GMSVRATEEAVVLARGAEPTKAKQAKRKPVEAPGLQELAERLSDNFDTRVKVELGQRKGR 299
Query: 276 FCIKYETNEQLKIICSLLG 294
+++ + + L+ I L+
Sbjct: 300 IVVEFGSVDDLERIIGLMS 318
>gi|262375376|ref|ZP_06068609.1| chromosome partitioning protein parB [Acinetobacter lwoffii SH145]
gi|262309630|gb|EEY90760.1| chromosome partitioning protein parB [Acinetobacter lwoffii SH145]
Length = 295
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 177/296 (59%), Gaps = 13/296 (4%)
Query: 5 YSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
KR L GRGL AL+G + + E + I ++ + + PR Y +
Sbjct: 3 VKKRGLAKGRGLDALLGSIQKEKLQLEAQG-IDHGQLKQIDVNLLKRGEYQPRRYINEQD 61
Query: 63 LEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI+ HGI+QP+++R +D Y+IIAGERR+RAA++A L+EVP I+R+++++
Sbjct: 62 LQELAASIEKHGIMQPIVIRPVDDERYPYEIIAGERRWRAAQLAGLTEVPAIVRDLNDQV 121
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+++A+ ++ E+G + +I VGK+R+ V+N+LR+L L
Sbjct: 122 AIALALIENIQRQDLNPIDQAMALQRFHEEFGLSHQEIADTVGKARTTVSNLLRLLSLAE 181
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++ +++ + +GHAR ++ D L +A +++ K +SVR TE+LV++ + K
Sbjct: 182 EVKDFMQQGLLDMGHARAILTLKAKDQLKVADIVIEKSLSVRQTEQLVRDFNT-----PK 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ + L +++S + ++ I ++ KG+ I Y + E+L I S+L
Sbjct: 237 QEKVKEAVAPDIQQLTQRLSERFSADVKIDYNKQGKGKLVISYHSLEELDGILSIL 292
>gi|241664774|ref|YP_002983134.1| parB-like partition protein [Ralstonia pickettii 12D]
gi|240866801|gb|ACS64462.1| parB-like partition protein [Ralstonia pickettii 12D]
Length = 303
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 183/300 (61%), Gaps = 13/300 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + +++ ++ + + + + P + PR +
Sbjct: 1 MST-MKKKGLGRGLEALLGSPAEIVEAARQE-----GAPTVLKLEQMQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID----NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI++ G++QP++VR ++ Y+IIAGERRFRA+++A L+EVPV++++V
Sbjct: 55 GALQELAASIRAQGLMQPILVRKVESDGAKPKYEIIAGERRFRASRLAGLTEVPVLVKDV 114
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++S+ +A++EN+QR+DLNPLEEA G +L+ E+ +T VG+SRS V+N+LR+L
Sbjct: 115 PDESAAAMALIENIQREDLNPLEEAQGIARLVREFQFTHEQAAESVGRSRSAVSNLLRLL 174
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ M+ ++ +GHAR L V + ++LA IV+K++SVR+TE+LV E
Sbjct: 175 NLAQPVQTMLMAGDLDMGHARALLAVDGATQITLANQIVNKRLSVRETEKLVASTLKPFE 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ +G + + + LE++++ ++GL + IK GQ +++ + ++ + + L
Sbjct: 235 LKSLKQKGGHQGGRDVARLEEELADQLGLGVQIKLAAKGGGQLTVQFSSLDEFDGLLARL 294
>gi|110638947|ref|YP_679156.1| chromosome partitioning protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281628|gb|ABG59814.1| chromosome partitioning protein [Cytophaga hutchinsonii ATCC 33406]
Length = 306
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 175/305 (57%), Gaps = 11/305 (3%)
Query: 1 MSN--NYSKRRLGRGLAALIGEVNQSIDS-PEKKTETIPESQDCISIHSIVPNPHNPRNY 57
MSN N + LGRGL AL+ + + + T + + + I + I N + PR++
Sbjct: 1 MSNTNNIKRNALGRGLGALLKDADSVKSKNTTETTAAVASNLNEIPVEQIEVNSYQPRSH 60
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
F E L++L +SIK GIIQP+ VR + Y++I+GERR RA+K+A L+ +P IR +
Sbjct: 61 FNDEALKELSESIKIQGIIQPITVRQLAPNQYQLISGERRLRASKLAGLTNIPAYIRTAN 120
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ LE+A++EN+QR++LNP+E A+ Y+++I+E Q ++G VGK+RS V N +R+LK
Sbjct: 121 DQQMLEMALIENIQRENLNPIEIAISYQRMITECNLKQEELGDRVGKNRSTVTNYVRLLK 180
Query: 178 LPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
LP ++ +R EIS+GHAR+++ L + I S+++SVR EELV+ N K
Sbjct: 181 LPPDIQVALRDNEISMGHARSIISLEKIEQQLYVLNKIKSEELSVRAVEELVRNLQNNKP 240
Query: 235 KRKKIF----EGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKII 289
+ + ++ L+ K++S G I +K KG+ I + + E L I
Sbjct: 241 ASADTKGTPAKPAAAANAEISSLQNKLTSHFGTKIQVKSDKQFKGEIKIPFVSAEDLNRI 300
Query: 290 CSLLG 294
+L
Sbjct: 301 LEILN 305
>gi|307265449|ref|ZP_07547005.1| parB-like partition protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919563|gb|EFN49781.1| parB-like partition protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 286
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 113/291 (38%), Positives = 180/291 (61%), Gaps = 16/291 (5%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LGRGL ALI E + + I+I I PN + PR F+ E L++L
Sbjct: 4 KKGLGRGLQALIPEYQTEE----------LQGVETINIAYIHPNQYQPRKQFDEESLKEL 53
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
+SIK HG+IQP+IVR +D G Y+I+AGERR+RAAK+A LSE+P I+++ D+ +EIA+
Sbjct: 54 AESIKQHGVIQPIIVRKVDYG-YQIVAGERRWRAAKIAGLSEIPAIVKDFDDLQVMEIAL 112
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLNP+EEA Y+ LI ++ TQ +I +GKSRS +AN +R+L L V+EM+
Sbjct: 113 IENLQREDLNPIEEAKAYKALIEQFHLTQEEISKKIGKSRSVIANSIRLLNLDDRVQEML 172
Query: 187 RKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
K +I++GHA+ + + S A+ +V + ++VR+TE LV+ K EK K +
Sbjct: 173 VKGDITIGHAKVILSLPNKSLQYEAAKKVVEENLNVRETENLVKNLLRKNEKITKKLKLD 232
Query: 244 REKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+ + ++ ++E + S +G + I + ++G I+Y + E L I ++
Sbjct: 233 K-IDVHVKEIEDNLCSFLGTKVKISQRSKDRGIIQIEYYSEEDLTRIIEII 282
>gi|304437858|ref|ZP_07397806.1| chromosome partitioning protein SpoOJ [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304369158|gb|EFM22835.1| chromosome partitioning protein SpoOJ [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 332
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 97/286 (33%), Positives = 153/286 (53%), Gaps = 7/286 (2%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
AL + + + +SI I PN PR F+ LE+L +SI HG
Sbjct: 21 DALTLPTDPPPEEKTETAAASAGVPAELSIDVIQPNRFQPRREFDEAALEELRESIAQHG 80
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
I+QP+ VR I G Y++IAGERR RAAKMA L+ VP R ++ E+A++EN+QR+D
Sbjct: 81 ILQPVTVRDIGAGKYELIAGERRLRAAKMAGLTTVPAFFRTANDAEMAEMALIENLQRED 140
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
LNP+EEA Y++L++E+ +Q + V +SRS +AN +R+L+L V+ I +++G
Sbjct: 141 LNPIEEAHAYQRLLTEFKLSQEQLARRVARSRSAIANSVRLLRLAKEVQAFIANGVLTMG 200
Query: 195 HARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL- 250
AR L++ A+ I ++S R E LV+ KK+ EK+ L
Sbjct: 201 QARPLLALETAALQREAAEYIQEHELSARGVEALVKRLAKDPNALKKLAPPKPEKKPDLF 260
Query: 251 -TDLEKKISSKVGLNISIKHRN--NKGQFCIKYETNEQLKIICSLL 293
+ E++++ +G + I+ KG+ I Y + E L+ + SLL
Sbjct: 261 VREAEERLTRSLGTKVRIQTGREEGKGRLEISYFSAEDLERLLSLL 306
>gi|152998465|ref|YP_001343300.1| parB-like partition protein [Marinomonas sp. MWYL1]
gi|150839389|gb|ABR73365.1| parB-like partition protein [Marinomonas sp. MWYL1]
Length = 294
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 105/293 (35%), Positives = 169/293 (57%), Gaps = 9/293 (3%)
Query: 5 YSKRRLGRGLAALI-GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
KR LGRGL AL+ + + ++ + + + + PR L
Sbjct: 3 MKKRGLGRGLDALLAPQSTPTNEAESGSNSEQIKGLTYLPVEWLSKGKFQPRRDMNPAQL 62
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
EDL SI++ GI+QP++VR + Y+IIAGERR+RAAK+A L +VPVI+R+V++ ++
Sbjct: 63 EDLASSIRTQGIMQPIVVRPSGHNQYEIIAGERRWRAAKLADLKQVPVIVRHVEDADAVV 122
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+A++EN+QR+DLNP+EEAL ++L+ ++ TQ ++ VGKSRS VAN+LR+L L VR
Sbjct: 123 LALIENIQREDLNPVEEALALQRLVEDFHLTQQEVADTVGKSRSTVANLLRLLGLTPEVR 182
Query: 184 EMIRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ +I +GHAR L+ + A +V+K +SVR+TE LV+ + E
Sbjct: 183 RLLEHGDIEMGHARALLPLEHDKQIQAASQVVTKSLSVRETERLVKNFQ-----VIEKNE 237
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
S+ L+ ++IS K+ + I+ KG+ I+Y E L+++ S L
Sbjct: 238 DSKPTLPDLSAEAERISQKINAAVKIQPSAKGKGKLVIEYRNPEHLELLISEL 290
>gi|254788513|ref|YP_003075942.1| ParB family protein [Teredinibacter turnerae T7901]
gi|237683402|gb|ACR10666.1| ParB family protein [Teredinibacter turnerae T7901]
Length = 306
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 94/309 (30%), Positives = 175/309 (56%), Gaps = 21/309 (6%)
Query: 1 MSNNYSKRRLGRGLAALI--------GEVNQSIDSPEKKTETIP----ESQDCISIHSIV 48
M+ ++ LGRGL AL+ G+ +++ + + + + + +
Sbjct: 1 MA---KRKGLGRGLDALLGSAGAAATGDSPKTVTEMAAQITSPETSRDGTLKELPVEFLQ 57
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
+ PR E LE+L +SIK+ G++QP++VR I + Y+IIAGERR+RA + A L
Sbjct: 58 RGKYQPRRDMHPEALEELAESIKAQGVMQPIVVRPIADNRYEIIAGERRWRATQQAGLDT 117
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
+P ++R+V +++++ +A++EN+QR+DLNP+EEA+ ++ E+ TQ ++ VGKSR+
Sbjct: 118 IPAVVRDVPDETAIALALIENIQREDLNPVEEAMALKRFQDEFELTQQEVADAVGKSRAA 177
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTLVSTSD--PLSLAQVIVSKKMSVRDTEELV 226
V N++R+L L + V +M+ ++ +GHAR L++ + +A+ IV+K +SVR E L
Sbjct: 178 VTNLMRLLNLTTEVSKMLEHGDLEMGHARCLLTLEEGAQKRVARQIVAKGLSVRQAEALA 237
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQ 285
+ + + + + LE+ + KVG+ + ++H KG+ +KY + ++
Sbjct: 238 RRTQQEDASDG---SDAATVDPDIKKLEEALGEKVGVPVMVQHSAKGKGKLVLKYNSLDE 294
Query: 286 LKIICSLLG 294
L I + LG
Sbjct: 295 LDGILAHLG 303
>gi|150004466|ref|YP_001299210.1| putative chromosome partitioning protein ParB [Bacteroides vulgatus
ATCC 8482]
gi|212693632|ref|ZP_03301760.1| hypothetical protein BACDOR_03151 [Bacteroides dorei DSM 17855]
gi|237708792|ref|ZP_04539273.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237724230|ref|ZP_04554711.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|254882802|ref|ZP_05255512.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|265755942|ref|ZP_06090409.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294778225|ref|ZP_06743651.1| ParB-like protein [Bacteroides vulgatus PC510]
gi|319644304|ref|ZP_07998798.1| hypothetical protein HMPREF9011_04401 [Bacteroides sp. 3_1_40A]
gi|149932890|gb|ABR39588.1| putative chromosome partitioning protein ParB [Bacteroides vulgatus
ATCC 8482]
gi|212663885|gb|EEB24459.1| hypothetical protein BACDOR_03151 [Bacteroides dorei DSM 17855]
gi|229437418|gb|EEO47495.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229457218|gb|EEO62939.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|254835595|gb|EET15904.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|263234020|gb|EEZ19621.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294447853|gb|EFG16427.1| ParB-like protein [Bacteroides vulgatus PC510]
gi|317384199|gb|EFV65172.1| hypothetical protein HMPREF9011_04401 [Bacteroides sp. 3_1_40A]
Length = 298
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 16/302 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL ALI S E+ S + I + I NP+ PR F+
Sbjct: 1 MAV-QKKFALGRGLDALI--------STEEVKTAGSSSINEIELSKISVNPNQPRREFDP 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R + Y+IIAGERR+RA+ A L +P IR D+++
Sbjct: 52 VALQELADSIAEIGIIQPITLRQLSEDSYQIIAGERRYRASIQAGLKSIPAYIRTADDEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN LE AL Y+ L+ +Y TQ + VGK R+ +AN LR+LKLP+
Sbjct: 112 VMEMALIENIQREDLNSLEIALAYQHLLEQYALTQERLSERVGKKRTTIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIV------SKKMSVRDTEELVQEQDNKKE 234
++ ++ EI +GHAR L+S DP + ++ V + + + +
Sbjct: 172 QIQVALKNREIDMGHARALLSLDDPKTQIRIFNEIQSQGYSVRKVEEIVKALSSGETVDS 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
KKI + + T L+ + G + + KG+ I + E L+ I +L
Sbjct: 232 GGKKIKPKGSKLSEEYTLLQSHLCGFFGSKVQLSCTAKGKGKISIPFNNEEDLERIMEIL 291
Query: 294 GE 295
Sbjct: 292 DS 293
>gi|255324014|ref|ZP_05365139.1| ParB-like partition protein [Corynebacterium tuberculostearicum
SK141]
gi|255298871|gb|EET78163.1| ParB-like partition protein [Corynebacterium tuberculostearicum
SK141]
Length = 346
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 101/343 (29%), Positives = 170/343 (49%), Gaps = 51/343 (14%)
Query: 1 MSNNYSKRRLGRGLAALI------------------------------------------ 18
M+ + LG+GLAALI
Sbjct: 1 MAE-QKQGGLGKGLAALIPSGPDAPTRKPRLGDSAADIILGNSTPQPGRKGGEGKRVKGA 59
Query: 19 -----GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
G ++S + I + ISI I+PNP PR F+ + L +L SI+
Sbjct: 60 PTIQQGSGSKSSKKRQATPAPIGATYREISIGDIIPNPKQPRTVFDEDELGELVHSIREF 119
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++QP++VR + G +++I GERR+RA+ A L+ +P I+R+ + + L A++EN+ R
Sbjct: 120 GLLQPVVVRPSEEGGFELIMGERRWRASSKAGLATIPAIVRDTKDDNLLRDALLENIHRV 179
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
LNPLEEA Y+QL+ E+G TQN++ +G+SR V N+LR+LKLP V++ + +S
Sbjct: 180 QLNPLEEAHAYQQLLEEFGVTQNELADRIGRSRPQVTNMLRLLKLPVEVQKRVAAGTLSA 239
Query: 194 GHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
GHAR L+ T +A I+++ +SVR TEE V + + + + +Y
Sbjct: 240 GHARALLSLDDTEAMEYIANRIIAEGLSVRATEEAVTLYKRDGKPAESKKKQPAPQPQYF 299
Query: 251 TDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
TD +++S + +++ KG+ +++ E + I +L+
Sbjct: 300 TDSAERLSDRFDTKVTVTMGKRKGKMVVEFGDQEDFERIMALI 342
>gi|311741706|ref|ZP_07715528.1| chromosome partitioning protein SpoOJ [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311303227|gb|EFQ79308.1| chromosome partitioning protein SpoOJ [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 346
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 101/343 (29%), Positives = 170/343 (49%), Gaps = 51/343 (14%)
Query: 1 MSNNYSKRRLGRGLAALI------------------------------------------ 18
M+ + LG+GLAALI
Sbjct: 1 MAE-QKQGGLGKGLAALIPSGPDAPTRKPRLGDSAADIILGNSTPQPGRKGGEGKRVKGA 59
Query: 19 -----GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
G ++S + I + ISI I+PNP PR F+ + L +L SI+
Sbjct: 60 PTIQQGSGSKSSKKRQATPAPIGATYREISIGDIIPNPKQPRTVFDEDELGELVHSIREF 119
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++QP++VR + G +++I GERR+RA+ A L+ +P I+R+ + + L A++EN+ R
Sbjct: 120 GLLQPVVVRPSEEGGFELIMGERRWRASSKAGLATIPAIVRDTKDDNLLRDALLENIHRV 179
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
LNPLEEA Y+QL+ E+G TQN++ +G+SR V N+LR+LKLP V++ + +S
Sbjct: 180 QLNPLEEAHAYQQLLEEFGVTQNELADRIGRSRPQVTNMLRLLKLPVEVQKRVAAGTLSA 239
Query: 194 GHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
GHAR L+ T +A I+++ +SVR TEE V + + + + +Y
Sbjct: 240 GHARALLSLDDTEAMEYIANRIIAEGLSVRATEEAVTLYKRDGKPAESKKKQPAPQPQYF 299
Query: 251 TDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
TD +++S + +++ KG+ +++ E + I +L+
Sbjct: 300 TDSAERLSDRFDTKVTVTMGKRKGKMVVEFGDQEDFERIMALI 342
>gi|18311633|ref|NP_563567.1| stage 0 sporulation protein J [Clostridium perfringens str. 13]
gi|110799346|ref|YP_697341.1| stage 0 sporulation protein J [Clostridium perfringens ATCC 13124]
gi|110802321|ref|YP_699900.1| stage 0 sporulation protein J [Clostridium perfringens SM101]
gi|168207747|ref|ZP_02633752.1| stage 0 sporulation protein J [Clostridium perfringens E str.
JGS1987]
gi|168211562|ref|ZP_02637187.1| stage 0 sporulation protein J [Clostridium perfringens B str. ATCC
3626]
gi|169343469|ref|ZP_02864469.1| stage 0 sporulation protein J [Clostridium perfringens C str.
JGS1495]
gi|182626403|ref|ZP_02954156.1| stage 0 sporulation protein J [Clostridium perfringens D str.
JGS1721]
gi|18146317|dbj|BAB82357.1| stage 0 sporulation protein J [Clostridium perfringens str. 13]
gi|110673993|gb|ABG82980.1| stage 0 sporulation protein J [Clostridium perfringens ATCC 13124]
gi|110682822|gb|ABG86192.1| stage 0 sporulation protein J [Clostridium perfringens SM101]
gi|169298421|gb|EDS80510.1| stage 0 sporulation protein J [Clostridium perfringens C str.
JGS1495]
gi|170660918|gb|EDT13601.1| stage 0 sporulation protein J [Clostridium perfringens E str.
JGS1987]
gi|170710467|gb|EDT22649.1| stage 0 sporulation protein J [Clostridium perfringens B str. ATCC
3626]
gi|177908277|gb|EDT70830.1| stage 0 sporulation protein J [Clostridium perfringens D str.
JGS1721]
Length = 286
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 105/291 (36%), Positives = 169/291 (58%), Gaps = 10/291 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E N + EK I + I N PR +F++ L +
Sbjct: 3 KKFGLGKGLGALIPEDNIKEEKKEK------GGIINIELKDIKANKKQPRKFFDNNKLNE 56
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +S+K HGIIQPLI++ + G I AGERR+RAAK+A L+EVP +I ++ ++ L+++
Sbjct: 57 LAESVKEHGIIQPLILKKEEKGYSII-AGERRYRAAKIAELTEVPALIMDISDEKLLQVS 115
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EE L YE+L+ E+ TQ ++ +GKSR+ + N +R+LKL V+E
Sbjct: 116 LIENIQREDLNPIEEGLAYERLLKEFALTQEELSKTMGKSRTTITNTMRLLKLDDRVKEY 175
Query: 186 IRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ + IS GH R ++ +AQ I+ +SVR+TE+LV++ N +K E
Sbjct: 176 VMEGVISEGHGRAILPLENEAQYEIAQKIIDNSLSVRETEKLVKKILND-AVEEKTSERR 234
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ Y D+ ++ G +++ NKG+ I+Y + E L+ I ++
Sbjct: 235 KPLNPYYKDVRDRLQDHFGTKVNLNANKNKGKIEIEYYSEEDLQRILDIIN 285
>gi|217966646|ref|YP_002352152.1| parB-like partition protein [Dictyoglomus turgidum DSM 6724]
gi|217335745|gb|ACK41538.1| parB-like partition protein [Dictyoglomus turgidum DSM 6724]
Length = 272
Score = 149 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 112/296 (37%), Positives = 176/296 (59%), Gaps = 31/296 (10%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS+ K+ LGRGL ALIGE + + I I IVPNP+ PR
Sbjct: 1 MSS--QKKGLGRGLEALIGEEEKL--------------IEKIPIDKIVPNPNQPRETLNP 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L +SIK G++QP++VR Y+I+AGERR+ AAK A L E+PVII+ +D++S
Sbjct: 45 ETLQELVESIKQLGLLQPILVRPKG-DYYEIVAGERRYHAAKTAGLKEIPVIIKEIDDQS 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +IA+ EN+QR+DLNP+E+A ++ I + TQ ++ + SRS VAN LR+L+LP
Sbjct: 104 AWDIALTENLQREDLNPIEKAKAFQYYIETFNVTQEELAQRLSISRSEVANFLRLLQLPP 163
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++E +R+ ++ GHARTL+ DP AQ I+ +K+SVR+ E+LV+++ + E
Sbjct: 164 EIQEEVRRGNLTYGHARTLLGIEDPNMQKLLAQKIIREKLSVREIEDLVKKRKIRNEIEI 223
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSL 292
+ LE+K+ +G + I+ ++ NKG+ I+Y++ E L+ I
Sbjct: 224 ----------PEIRSLEEKLEQYLGTRVKIQPKSPNKGKITIEYKSLEHLEEIIRK 269
>gi|167629161|ref|YP_001679660.1| chromosome partitioning protein parb, putative [Heliobacterium
modesticaldum Ice1]
gi|167591901|gb|ABZ83649.1| chromosome partitioning protein parb, putative [Heliobacterium
modesticaldum Ice1]
Length = 325
Score = 149 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 101/328 (30%), Positives = 177/328 (53%), Gaps = 36/328 (10%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ R LG+GL ALI + + ++ +S I + I PN PR +F+
Sbjct: 1 MAKKGMGRGLGKGLEALIPGI-----TTNEELSNDSQSAMEIDLDQIEPNLDQPRKHFDH 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L +SI +HG+IQPL+VR I Y++I GERR+RA + L++VPVIIR+ D K+
Sbjct: 56 EALEELARSIAAHGVIQPLVVRPIGKDRYQLIVGERRWRACRQLGLTKVPVIIRDWDEKT 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR++LNP+EEA + LI ++ TQ + VGKSRS++AN LR+L LP+
Sbjct: 116 VAEVALIENIQRENLNPIEEAQAFRALIDDHQMTQEQLAKRVGKSRSYIANALRLLSLPA 175
Query: 181 SVREMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDN------ 231
V+ M+ +++ GHA+ +V+ D + A + SVR EE+V++++
Sbjct: 176 PVQAMVSTGKLTAGHAKVIVAIDDASVQETFALKAAEENWSVRRMEEVVRQRNQEAKKDF 235
Query: 232 ----------------------KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH 269
+++ ++ ++ +E+++ SK+ + I+
Sbjct: 236 IFDAPVAVNDESDKRDDQITPVPVQEKPRLRATPPTVNPDISAMEERLRSKLQTQVRIRA 295
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
G + + ++++L+ +C L N+
Sbjct: 296 NGAMGFIELCFYSSDELQRLCDHLLGNE 323
>gi|21674664|ref|NP_662729.1| ParB family partitioning protein [Chlorobium tepidum TLS]
gi|21647868|gb|AAM73071.1| partitioning protein, ParB family [Chlorobium tepidum TLS]
Length = 294
Score = 149 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 105/297 (35%), Positives = 164/297 (55%), Gaps = 9/297 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD-CISIHSIVPNPHNPRNYFESEGL 63
SK+ LGRGL ALI E ++ ++TE + + + + I NP PR FE L
Sbjct: 1 MSKKALGRGLKALISEEGFAVAEKAEETEKMQDGVIGSLPVEKIKVNPFQPRQAFEETAL 60
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSL 122
+L SI +G+IQP+ V G +I+GERR RA K A +P + ++ S L
Sbjct: 61 NELRNSIIENGVIQPVTVCRDGEGYL-LISGERRLRAVKSAGFKFIPAYVIEAHEDASKL 119
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR+DLN +E AL L+++ TQ+++ VGK+RS VAN LR+LKLP +
Sbjct: 120 ELALIENIQREDLNAIEVALALRSLVTKCNLTQDEVAQKVGKNRSTVANFLRLLKLPRQI 179
Query: 183 REMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++ IR EIS GHAR L S L + + I+++++SVR TE LV K K
Sbjct: 180 QDSIRTREISSGHARALINLPSEHLQLKVWRQIMARQLSVRQTEALVNNMFKDKPKTASP 239
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLLGE 295
R + + +E ++ ++ +S ++ + +G+ IKY + E L I L+G+
Sbjct: 240 APAPRAVQ--IDQIEARLRERLATKVSLVEKKGGQGEIHIKYFSGEDLDRILELIGQ 294
>gi|254250981|ref|ZP_04944299.1| ParB-like partition protein [Burkholderia dolosa AUO158]
gi|124893590|gb|EAY67470.1| ParB-like partition protein [Burkholderia dolosa AUO158]
Length = 305
Score = 149 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 179/299 (59%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + +++ + + PR +
Sbjct: 9 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPSTLALGKLQAGKYQPRTRMDE 63
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 64 GNLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQA 123
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L +
Sbjct: 124 AAAMALIENIQREDLNPLEEAQGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAA 183
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 184 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAQTTKAAPAVKA 243
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I + L N
Sbjct: 244 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVMIDFGNLDALEGILARLRGN 300
>gi|269836499|ref|YP_003318727.1| parB-like partition protein [Sphaerobacter thermophilus DSM 20745]
gi|269785762|gb|ACZ37905.1| parB-like partition protein [Sphaerobacter thermophilus DSM 20745]
Length = 292
Score = 149 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 102/301 (33%), Positives = 148/301 (49%), Gaps = 12/301 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL ALI + + I +I PNP PR F+
Sbjct: 1 MA--QRKGGLGRGLDALI--------QAQAGQAGGSGGVQEVEIDAIEPNPFQPRTDFDP 50
Query: 61 EGLEDLCQSIKSHGIIQPLI-VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L L SI+ HG+IQPL+ Y+I+AGERR+RAA++A L VP +IR+ +
Sbjct: 51 EQLASLAASIREHGVIQPLLLAHNDGPVPYRIVAGERRWRAARLAGLRTVPALIRDSTPR 110
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+A+VENVQR DL +EEA Y QLI E+G TQ ++ + VGKSR + N LRIL P
Sbjct: 111 ELLEVALVENVQRADLTVIEEATAYRQLIEEFGLTQAEVAARVGKSRVAITNALRILDAP 170
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
VR + +I+ GHAR L+ + + + Q +E R++
Sbjct: 171 EEVRAAVAVGQITEGHARALLGLPLAVEQVAALQIVIARDLSVRQTEQLVREWREGRRRT 230
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL-GENDF 298
L LE + +G + ++ + G+ I + T E+L I + G+N+
Sbjct: 231 TREPAPPPPSLQRLEDQFRRALGTKVELRKGRSGGRIVIHFFTEEELDGIYRRIVGDNED 290
Query: 299 E 299
E
Sbjct: 291 E 291
>gi|145219204|ref|YP_001129913.1| chromosome segregation DNA-binding protein [Prosthecochloris
vibrioformis DSM 265]
gi|145205368|gb|ABP36411.1| chromosome segregation DNA-binding protein [Chlorobium
phaeovibrioides DSM 265]
Length = 295
Score = 149 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 166/297 (55%), Gaps = 9/297 (3%)
Query: 5 YSKRRLGRGLAALIGEVN-QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+K LG+GL ALI + S T + + +S+ SI NP PR F+ L
Sbjct: 1 MAKNALGKGLKALIPDEGYSSSSKESSDTSLVEGAIGSLSVESIHANPFQPRREFDETAL 60
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR-NVDNKSSL 122
E+L SI +G+IQ + D Y++I+GERR RAA+ A +P + ++ L
Sbjct: 61 EELMNSILENGVIQ-PVTVTRDGDGYQLISGERRLRAARKAGFKFIPAYVIAAQQDQGKL 119
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR+DLN +E AL + L ++ TQ++I VGK+RS V+N LR+LKLP +
Sbjct: 120 EMALIENIQREDLNAIEVALALKSLTTKCRMTQDEIAQKVGKNRSTVSNFLRLLKLPMQI 179
Query: 183 REMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+E IRK EIS GHAR L + + + I+++++SVR TE LV ++K +
Sbjct: 180 QESIRKNEISSGHARALINLPGEQQQVKVWRQILARQLSVRQTETLVNSL--FRDKSEPA 237
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ +E+ ++ LE + +K+ + I + + KG+ I+Y + + L I ++G+
Sbjct: 238 SKNIQERAPHIAQLESLLRNKLATKVRILEKKAGKGEIHIQYFSEDDLDRILEIMGD 294
>gi|311032244|ref|ZP_07710334.1| parB-like partition protein [Bacillus sp. m3-13]
Length = 283
Score = 149 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 105/294 (35%), Positives = 176/294 (59%), Gaps = 16/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL + S + E+ ISI + PNP+ PR YFE E +++L
Sbjct: 3 KGLGKGINALFPSIEASKE----------EAVQEISIKEVRPNPYQPRKYFEPEAIQELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI HGI+QP+IVR Y+I+ GERRFRAAK A LS+VPV+IR++ + +E+A++
Sbjct: 53 ESILQHGILQPIIVRK-SIKGYEIVVGERRFRAAKEAKLSKVPVVIRSLTEQQMMELALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL P+EEA Y+ L+ + TQ + S +GKSR H+AN +R+L LP +V+E++
Sbjct: 112 ENLQREDLTPIEEAAAYQSLMVKLELTQEQLASRLGKSRPHIANHIRLLSLPKTVQELMN 171
Query: 188 KEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+GH R L ++ ++ + ++VR E+L+Q+ + + K +
Sbjct: 172 DGKLSMGHGRALLGLKRKEKLKAVIDKVLQEHLNVRQLEQLIQQLNESVPRETK--KDPE 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
EK+ +L D E + + G ++ IK NKG+ I++ +++ L + LL + +
Sbjct: 230 EKDIFLKDHESVLRERFGTSVFIKRTKNKGKIEIEFFSDDDLNRLLELLAQTEE 283
>gi|193212023|ref|YP_001997976.1| parB-like partition protein [Chlorobaculum parvum NCIB 8327]
gi|193085500|gb|ACF10776.1| parB-like partition protein [Chlorobaculum parvum NCIB 8327]
Length = 294
Score = 149 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 107/297 (36%), Positives = 163/297 (54%), Gaps = 9/297 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPES-QDCISIHSIVPNPHNPRNYFESEGL 63
SK+ LG+GL ALI E + ++ E I E + + I NP PR F+ L
Sbjct: 1 MSKKALGKGLKALISEEGFAAAEKAEEREAIQEGAIGSLPVDKIKVNPFQPRKEFDEAAL 60
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSL 122
E+L SI +G+IQP+ V D Y++I+GERR RA A +P + ++ S L
Sbjct: 61 EELRNSIIENGVIQPVTVCR-DGDQYQLISGERRLRAVTSAGFKFIPAYVIEAHEDASKL 119
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR+DLN +E AL + L+++ TQ+++ VGK+RS V+N LR+LKLP +
Sbjct: 120 ELALIENIQREDLNAIEVALALKSLVTKCDLTQDEVAQKVGKNRSTVSNFLRLLKLPRQI 179
Query: 183 REMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+E IR EIS GHAR L S L + + IV++++SVR TE LV K
Sbjct: 180 QESIRTREISSGHARALINLPSEHLQLKVWRQIVARQLSVRQTEALVNNIFKDTTKPAVP 239
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLLGE 295
R + L +E ++ ++ + I+ + +G+ IKY + E L I LLG+
Sbjct: 240 KAEPRAIQ--LDQIEGQLRERLATKVRLIERKGGQGEIQIKYFSGEDLDRILDLLGQ 294
>gi|331700961|ref|YP_004397920.1| parB-like partition protein [Lactobacillus buchneri NRRL B-30929]
gi|329128304|gb|AEB72857.1| parB-like partition protein [Lactobacillus buchneri NRRL B-30929]
Length = 294
Score = 149 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 165/299 (55%), Gaps = 14/299 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+N LG+G+ AL + N +T E + + +I PNP+ PR+ F+
Sbjct: 1 MANKKKLTGLGKGIEALFQDNN---------VDTSKEDVVDLKVSTIKPNPYQPRHRFDQ 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ LEDL SIK+ G+ QP+IVR D + ++++ GERR RA+K+A +P IIR+V+
Sbjct: 52 KALEDLALSIKNSGVFQPIIVRQPDPEVDSFELLTGERRLRASKIAKQETIPAIIRSVNE 111
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +EIA++EN+QR+DL LEEA Y L+S TQ + + +GKSR ++AN LRIL L
Sbjct: 112 EQMMEIAVMENLQREDLTTLEEAEAYNMLMSRLDLTQAQVAARLGKSRPYIANYLRILGL 171
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P+ V++M+ +++S+G ARTL+S ++ L ++ +L Q +
Sbjct: 172 PTEVKKMLEDKKLSMGQARTLLSVNNKQELIKLARKSVNESLTVRQLEQAAAKINGNKPA 231
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI---KHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + K ++ E ++ K G ++SI + KG+ I+Y + + L I + G
Sbjct: 232 KKKKAPRKSPFVRASEGQLQEKFGTSVSIVNSSRKKGKGKIEIEYTSTDDLNRILEMFG 290
>gi|254491043|ref|ZP_05104224.1| ParB-like nuclease domain family [Methylophaga thiooxidans DMS010]
gi|224463556|gb|EEF79824.1| ParB-like nuclease domain family [Methylophaga thiooxydans DMS010]
Length = 287
Score = 149 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 108/292 (36%), Positives = 171/292 (58%), Gaps = 11/292 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
KR LGRGL AL+ +VNQ E + +S + I P + PR E LE+
Sbjct: 4 KKRGLGRGLDALLADVNQ-----EDSNVNLDDSLQHFPLDMIQPGKYQPRVDMSQESLEE 58
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SI++ G++QP++VR I G Y+I+AGERR+RA++MA L VPV+IR+V ++S++ +A
Sbjct: 59 LADSIRAQGLVQPIVVRPIGEGKYEIVAGERRWRASRMAGLEVVPVLIRDVSDRSAIAMA 118
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR++LNP+EEA +L E+ T VGKSR+ V N+LR+ L V+++
Sbjct: 119 LIENIQRENLNPMEEANALFRLREEFEMTHQQAAEAVGKSRAAVTNLLRLRNLNEDVKKL 178
Query: 186 IRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ ++ +GHAR L + A IV K +SVR+TE+L++ N K+ ++K +
Sbjct: 179 VENCDLEMGHARALLALEGEVQTETAGQIVEKGLSVRETEQLIRRVLNPKKTQQKQSDRD 238
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
E + D+E+ I K+ SIKH + KG+ I Y ++LK + +
Sbjct: 239 FE---EINDIEQSIKQKLDSACSIKHTASGKGRLVINYRNVDELKKLIKRIK 287
>gi|154245781|ref|YP_001416739.1| parB-like partition protein [Xanthobacter autotrophicus Py2]
gi|154159866|gb|ABS67082.1| parB-like partition protein [Xanthobacter autotrophicus Py2]
Length = 305
Score = 149 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 125/305 (40%), Positives = 187/305 (61%), Gaps = 13/305 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + RLGRGLAALIGE+ +P ++ + I + PNP NPR F
Sbjct: 1 MADEQ-RSRLGRGLAALIGEMEPQ-AAPAARSGAGRGGPRRVPIEHVRPNPRNPRRTFLE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRA-IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
EGL+DL SI+ GIIQP++VR + ++I+AGERR+RAA+ A+L EVPV++ + ++
Sbjct: 59 EGLDDLTASIREKGIIQPIVVRQLNGSDSFEIVAGERRWRAAQRAALHEVPVVVLELSDR 118
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+LE+AI+ENVQR DLNP+EEA GYE L+ E+ Y QND+ I+GKSRSH+AN LR+LKLP
Sbjct: 119 EALEVAIIENVQRADLNPVEEAQGYESLMGEFDYNQNDLARIIGKSRSHIANTLRLLKLP 178
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ V+ + +S GHAR L++ +DP +A+ +V K ++VRD E L + + K
Sbjct: 179 AGVKTYLADGRLSAGHARALLACADPERMAKDVVEKGLTVRDVEALSKARTALTAAPAKG 238
Query: 240 FEGS----------REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
K LEK++S +GL++ I+ + G+ I+Y++ +QL +
Sbjct: 239 QAAPAGKASKGGAPERKSADSRALEKRLSDALGLSVGIEGKGEAGELRIRYKSLDQLDEV 298
Query: 290 CSLLG 294
C LG
Sbjct: 299 CRRLG 303
>gi|186477782|ref|YP_001859252.1| parB-like partition protein [Burkholderia phymatum STM815]
gi|184194241|gb|ACC72206.1| parB-like partition protein [Burkholderia phymatum STM815]
Length = 310
Score = 149 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 102/299 (34%), Positives = 174/299 (58%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + + + + PR +
Sbjct: 15 MNAVARKKGLGRGLEALLGGSADITEAV-----KIDGAPHTLPLDKMQAGKYQPRTRMDE 69
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR + ++IIAGERRFRAA++A L EVPV++R+V +++
Sbjct: 70 GALQELAASIRAQGLMQPILVRPVSPEKFEIIAGERRFRAARLAGLDEVPVLVRDVPDQA 129
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L S
Sbjct: 130 AAAMALIENIQREDLNPLEEAQGIQRLLDEFSFTHEQAAESVGRSRSAVSNLLRLLNLAS 189
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +++K+MSVR+TE+LV K
Sbjct: 190 PVQTMLLAGDLDMGHARALLAVDAATQITLANQVINKRMSVRETEKLVTATTKAAPAVKA 249
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
++ LE+++S + + IK R +GQ + + + L+ I + L N
Sbjct: 250 KPNNDGGRD--TRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILARLRGN 306
>gi|260774532|ref|ZP_05883445.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio metschnikovii CIP 69.14]
gi|260610438|gb|EEX35644.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio metschnikovii CIP 69.14]
Length = 297
Score = 149 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 178/299 (59%), Gaps = 12/299 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTET----IPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + +SI S+ P + PR S
Sbjct: 1 MSKRGLGKGLDALLATSSMAREKQQTASHSQAMSTDGELIELSITSLKPGIYQPRKDMSS 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR ++ G ++IIAGERR+RAAK A L +VP +I+ VD+++
Sbjct: 61 EALEELALSIQSQGIIQPIVVRPLEFGGFEIIAGERRWRAAKQAGLKQVPCLIKRVDDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNAIEEAQALERLQDEFKLTHQQVADVIGKSRTTVSNLLRLNQLDD 180
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+V+ ++ +++ +GHAR+ ++ AQV+V K+++VR E LV+ ++
Sbjct: 181 AVKRLVESKQLEMGHARSLLVLPIEQQQPCAQVMVDKQLTVRQAESLVKRWSSEAPAAPV 240
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ E E+ L+ L +++ K+ + + + N KG+ I + EQL LL + D
Sbjct: 241 SPVLATEVEQQLSALAERLQKKMAVKLQV---NGKGRLTIDFTNQEQL---IELLKQLD 293
>gi|1916915|gb|AAB51268.1| ParB [Caulobacter crescentus CB15]
Length = 293
Score = 149 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 119/295 (40%), Positives = 175/295 (59%), Gaps = 8/295 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS +R LGRGL+A ++ P ++ I + NP PR F
Sbjct: 1 MSE--GRRGLGRGLSACWASRRRAGSGPGEQF----GGSREAPIEILQRNPDQPRRTFRE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E LEDL SI+ G++QP++VR + Y+I+AGERR+RAA+ A L VP+++R +D+
Sbjct: 55 EDLEDLSNSIREKGVLQPILVRPSPDTAGEYQIVAGERRWRAAQRAGLKTVPIMVRELDD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ LEI I+ENVQR DLN LEEAL Y+ L+ ++ TQ +I +GKSRSHVAN +R+L L
Sbjct: 115 LAVLEIGIIENVQRADLNVLEEALSYKVLMEKFERTQENIAQTIGKSRSHVANTMRLLAL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P V+ + E++ GHAR + + +DP++LA+ I+ +SVR+TE L ++ N + K
Sbjct: 175 PDEVQSYLVSGELTAGHARAIAAAADPVALAKQIIEGGLSVRETEALARKAPNLSAGKSK 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
R K+ LE +SS +GL++SI HR + G I Y T EQL +C+ L
Sbjct: 235 GGRPPRVKDTDTQALESDLSSVLGLDVSIDHRGSTGTLTITYATLEQLDDLCNRL 289
>gi|299770412|ref|YP_003732438.1| transcriptional regulator [Acinetobacter sp. DR1]
gi|298700500|gb|ADI91065.1| transcriptional regulator [Acinetobacter sp. DR1]
Length = 295
Score = 149 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 178/299 (59%), Gaps = 15/299 (5%)
Query: 1 MSNNYSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR L GRGL AL+G + + E + I ++ + + PR +
Sbjct: 1 MS--IKKRGLAKGRGLDALLGSIQKEKLQLEAQA-LDHGQLKQIDVNLLKRGEYQPRRFI 57
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI+ HG++QP+++R +D+ Y+IIAGERR+RAA++A L+E+P I+R++
Sbjct: 58 HEHDLQELASSIEKHGVMQPIVIRPVDDETHPYEIIAGERRWRAAQLAGLTEIPAIVRDL 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+++ ++ +A++EN+QR+DLNP+++A+ ++ E+G + +I VGK+R+ V+N+LR+L
Sbjct: 118 NDQVAIALALIENIQRQDLNPIDQAIALQRFHDEFGLSHQEIADTVGKARTTVSNLLRLL 177
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L +++ +++ ++ +GHAR + + D L +A++++ K +SVR TE+LV+
Sbjct: 178 SLADDIKDFMQQGQLDMGHARAILTLKGKDQLEVAKIVIEKGLSVRQTEQLVR-----DR 232
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
K + + L +K+S + G N+ I H KG+ I Y T ++L I ++
Sbjct: 233 SEPKQEKEKAPVAPDIEQLTQKLSERFGANVKIDHNQKGKGKLVIHYHTLDELDGILNI 291
>gi|294341943|emb|CAZ90372.1| putative Chromosome partitioning protein parB [Thiomonas sp. 3As]
Length = 300
Score = 149 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 178/304 (58%), Gaps = 15/304 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL L+G + +ET + + + +VP + PR +
Sbjct: 1 MATKKPK-GLGRGLDVLLG-------PSVELSETDAAALRELRLDDLVPGRYQPRAQMDE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L QSIK+ G++QP++VRA+ +G Y+IIAGERR RAA++A L VP +++ D+++
Sbjct: 53 GALYELAQSIKAQGVMQPVLVRALPDGRYEIIAGERRTRAARLAGLDSVPALVKEADDRT 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L +A++EN+QR+DLNPLEEA G +LI E+G+T G VG+SR+ +N+LR+L+L
Sbjct: 113 TLAMALIENLQREDLNPLEEARGIARLIEEFGHTHEQAGQAVGRSRTATSNLLRLLQLSE 172
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+V+ M+ ++ +GHAR L + + + AQ I++K++SVR+ E LV +
Sbjct: 173 TVQTMLLAGDLDMGHARALLSLDKAQQVQAAQQILAKRLSVREAERLVARTQQAQNPGAT 232
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-----GQFCIKYETNEQLKIICSLL 293
+ K++ LE+++S + + I+ + + G+ I++ + ++L + +LL
Sbjct: 233 PKKAKAAKDQDWKRLEEELSERFTAPVEIRSKAGRKGQHGGEIAIRFSSLDELDGLLALL 292
Query: 294 GEND 297
D
Sbjct: 293 RGGD 296
>gi|183985451|ref|YP_001853742.1| chromosome partitioning protein ParB [Mycobacterium marinum M]
gi|183178777|gb|ACC43887.1| chromosome partitioning protein ParB [Mycobacterium marinum M]
Length = 327
Score = 149 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 96/326 (29%), Positives = 163/326 (50%), Gaps = 29/326 (8%)
Query: 1 MSNNYSKRR-LGRGLAALIGEVNQSIDS--------------------PEKKTETIPESQ 39
M+ ++ LGRGLA+LI +S P +
Sbjct: 1 MTQPSRRKGGLGRGLASLIPTGPAEGESDAQGFGPRMGSAAADVVIGGPVADAAAMGAVY 60
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL----YKIIAGE 95
I+ I NP PR F+ E L +L SI+ G++QP++VR +D Y+I+ GE
Sbjct: 61 REIAPGDIEANPRQPRQVFDEEALSELVHSIREFGLLQPIVVRTVDGAQSGAPYQIVMGE 120
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAA+ A L+ +P I+R + + L A++EN+ R LNPLEEA Y+QL+ E+G T
Sbjct: 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS----TSDPLSLAQV 211
+++ + +G+SR + N++R+LKLP V+ + +S GHAR L+S LA
Sbjct: 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN 271
IV++ +SVR TEE V + + L D+ ++S+ +++
Sbjct: 241 IVAEGLSVRATEEAVTLANRSDASTPTPPRRKPIQMPGLQDVADRLSNAFDTRVTVSLGK 300
Query: 272 NKGQFCIKYETNEQLKIICSLLGEND 297
KG+ +++ + + L+ I ++ + +
Sbjct: 301 RKGKIVVEFGSVDDLQRIIGIMTDAE 326
>gi|307719914|ref|YP_003875446.1| chromosome 1-partitioning protein ParB [Spirochaeta thermophila DSM
6192]
gi|306533639|gb|ADN03173.1| probable chromosome 1-partitioning protein ParB [Spirochaeta
thermophila DSM 6192]
Length = 287
Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 157/292 (53%), Gaps = 12/292 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+KR LG+G+ AL+G + S + + +VP PR +F+ LE
Sbjct: 1 MAKRGLGKGIDALLGGGLDFSEEE--------GSLREVEVERLVPQEGQPRKHFDEAALE 52
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
DL +SIK G++QPL+V + G ++I+AGERR+RAAK+A + VPVI+R+ + LEI
Sbjct: 53 DLARSIKEKGVLQPLLVEELPGGKFRIVAGERRYRAAKLAGRTTVPVIVRSFTEQERLEI 112
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DL P+EEA Y L+ G TQ + +GKSR +AN LR+L+LP ++
Sbjct: 113 ALIENIQREDLTPIEEAQAYRALMEHAGLTQEQLAERLGKSRPVIANALRLLQLPEEMQR 172
Query: 185 MIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ + I+ GHAR ++ L IV + +SVR+ E +K
Sbjct: 173 ALDERTITPGHARAILSVPDDEGRRRLFSQIVKEGLSVREAERRAARVAG-DAAGRKTPA 231
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
R ++ +L DLE + ++G + IK +G I Y + + L+ + L
Sbjct: 232 DERARDPFLRDLEDRCIERLGTKVRIKGSLERGVVEIAYFSRDDLERLVEAL 283
>gi|290968089|ref|ZP_06559638.1| ParB-like protein [Megasphaera genomosp. type_1 str. 28L]
gi|290781995|gb|EFD94574.1| ParB-like protein [Megasphaera genomosp. type_1 str. 28L]
Length = 305
Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats.
Identities = 97/308 (31%), Positives = 165/308 (53%), Gaps = 24/308 (7%)
Query: 1 MSNNY-----SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR 55
MS+ +K LGRGL A + + + I + I N H PR
Sbjct: 1 MSSKKTGLPNNKHGLGRGLGAFLPTRTAGASTAD---------VQDIPLTHIQANTHQPR 51
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
FE + L+ L S+K +G++QP+IV+ +NG Y +IAGERR RAAK+ + ++R
Sbjct: 52 RVFEEDNLQALADSLKQYGLVQPIIVQRQENGEYSLIAGERRLRAAKLCGWKTISALVRT 111
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+++ S E+A++EN+QR+DLN +EE Y+ L+ +G TQ ++ VGKSR+ +AN++R+
Sbjct: 112 YEDQVSAEVALIENLQREDLNAIEEGCAYKALMDSFGLTQAEVAEKVGKSRAQIANMIRL 171
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNK 232
L+LP V+EM+ +S+G R L+ S AQVIVS+ +S R E V+ +
Sbjct: 172 LQLPEEVKEMVSNGVLSMGQVRPLLQLSGRQKQLAAAQVIVSRALSARQAETYVRNLNQ- 230
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIIC 290
K + + + +L L+ ++ +G ++I K G+ I + + ++ + +
Sbjct: 231 ----SKEKKETGSADAFLESLQDRMKLHLGTKVAIHLARGKKSGKIEISFASEKEFERLM 286
Query: 291 SLLGENDF 298
SLL + +
Sbjct: 287 SLLTDAEE 294
>gi|296137584|ref|YP_003644826.1| parB-like partition protein [Thiomonas intermedia K12]
gi|295797706|gb|ADG32496.1| parB-like partition protein [Thiomonas intermedia K12]
Length = 300
Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 180/304 (59%), Gaps = 15/304 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL L+G + +ET + + + +VP + PR +
Sbjct: 1 MATKKPK-GLGRGLDVLLG-------PSVELSETDAAALRELRLDDLVPGRYQPRAQMDE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L QSIK+ G++QP++VRA+ +G Y+IIAGERR RAA++A L VP +++ VD+++
Sbjct: 53 GALYELAQSIKAQGVMQPVLVRALPDGRYEIIAGERRTRAARLAGLDSVPALVKEVDDRT 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L +A++EN+QR+DLNPLEEA G +LI E+G+T G VG+SR+ +N+LR+L+L
Sbjct: 113 TLAMALIENLQREDLNPLEEARGIARLIEEFGHTHEQAGHAVGRSRTATSNLLRLLQLSE 172
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+V+ M+ ++ +GHAR L + + + AQ I++K++SVR+ E LV +
Sbjct: 173 AVQTMLLAGDLDMGHARALLSLDKAQQVQAAQQILAKRLSVREAERLVARTQQAQNPGAT 232
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-----GQFCIKYETNEQLKIICSLL 293
+ K++ LE+++S + + I+ + + G+ I++ + ++L + +LL
Sbjct: 233 PKKAKAAKDQDWKRLEEELSERFTAPVEIRSKAGRKGQHGGEIAIRFSSLDELDGLLALL 292
Query: 294 GEND 297
+D
Sbjct: 293 RGSD 296
>gi|170699465|ref|ZP_02890508.1| parB-like partition protein [Burkholderia ambifaria IOP40-10]
gi|172059163|ref|YP_001806815.1| parB-like partition protein [Burkholderia ambifaria MC40-6]
gi|170135614|gb|EDT03899.1| parB-like partition protein [Burkholderia ambifaria IOP40-10]
gi|171991680|gb|ACB62599.1| parB-like partition protein [Burkholderia ambifaria MC40-6]
Length = 297
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 179/299 (59%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLDEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L +
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAA 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKEAPTVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVMIDFGNLDALEGILVRLRGN 292
>gi|291615444|ref|YP_003525601.1| parB-like partition protein [Sideroxydans lithotrophicus ES-1]
gi|291585556|gb|ADE13214.1| parB-like partition protein [Sideroxydans lithotrophicus ES-1]
Length = 288
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 99/293 (33%), Positives = 170/293 (58%), Gaps = 15/293 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ + T + + + + P + PR+ +
Sbjct: 1 MAKPI--KGLGRGLDALLSGNS---------TSKQNDVLRELKVEQLKPGKYQPRSRMDE 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L SI+ G++QP++ R + G Y+IIAGERR+RAA++A L VPVI+R V + +
Sbjct: 50 ASLNELAASIRVQGVMQPILARELVEGGYEIIAGERRWRAAQLADLKIVPVIVRKVPDNA 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L +A++EN+QR+DLNPLEEA+G ++LI E+ T VG+SRS +N+LR+LKLP
Sbjct: 110 ALAMALIENIQREDLNPLEEAIGIQRLIDEFQMTHQAAADAVGRSRSAASNLLRLLKLPH 169
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++M+ + + +GHAR L+S + A I+ + +SVR+ E+LVQ+Q + +
Sbjct: 170 PVQDMLMEGSLDMGHARALLSLEGSQQVLLANKIILEGLSVREAEKLVQQQGEQAPAKID 229
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC 290
+ + + L++ IS+ +G + IK + G+ I++ +N+ L+ +
Sbjct: 230 SQKPKKT-NRDTQQLQEDISAHLGTRVEIKSNSKGGGKLVIEFTSNDHLEELL 281
>gi|289436048|ref|YP_003465920.1| chromosome partition protein, ParB family [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289172292|emb|CBH28838.1| chromosome partition protein, ParB family [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 283
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 94/286 (32%), Positives = 156/286 (54%), Gaps = 12/286 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL +T E+ I + I PNP+ PR F+++ + +L
Sbjct: 3 KGLGKGINALF-----------NNVDTNEETVQNIPLKEIKPNPYQPRKIFDTKAINELR 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R G Y+I+ GERRFRAAK A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNTAKG-YEIVVGERRFRAAKEAKLKEIPAVVRDLTEEEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ + G TQ + VGKSR ++AN +R+L LP V+ M+R
Sbjct: 111 ENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ +L N E +
Sbjct: 171 DGTLSAGHGRVLLGLKVKKNIIPTAKKAVAQGLTVRQLEDVVANLNENVSRETIKPARVP 230
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 231 IFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 276
>gi|259502032|ref|ZP_05744934.1| chromosome partitioning protein Spo0J [Lactobacillus antri DSM
16041]
gi|259169996|gb|EEW54491.1| chromosome partitioning protein Spo0J [Lactobacillus antri DSM
16041]
Length = 295
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 171/301 (56%), Gaps = 17/301 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRG+ AL + + E+ + + I PNP+ PR F+S
Sbjct: 1 MAKRKT-GGLGRGIEALF-------EENTIEEPVNGETVQDVKLTLIRPNPYQPRRTFDS 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L++L SIK G+ QP+I+R D Y++IAGERRFRA+KMA +P I+RN+ +
Sbjct: 53 AALQELADSIKETGVFQPIILRQPDRAVERYELIAGERRFRASKMAQQETIPAIVRNMTD 112
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +E+A++EN+QR+DL PLEEA Y+ L+ + TQ + + +GKSR ++AN LR+L L
Sbjct: 113 EQMMEVAVLENLQREDLTPLEEAQAYQTLMDKLSLTQAQVANRLGKSRPYIANYLRLLGL 172
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLS---LAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P+ +++ + + +S+G ART++ D LA+ + K ++VR EE+V + +
Sbjct: 173 PTLIKDALNEGRLSMGQARTILGLKDKKQLVGLAKRAMDKNLTVRQLEEIVAQMNG--TS 230
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLL 293
+K+ + + K YL + E ++ SK G +++ + G+ I Y +N+ L I +L
Sbjct: 231 KKRAQKKGQRKPVYLREAEAQLQSKFGAKVAVSQSRKRGAGKIEIPYTSNDDLTRILEVL 290
Query: 294 G 294
Sbjct: 291 N 291
>gi|254292380|ref|YP_003058403.1| parB-like partition protein [Hirschia baltica ATCC 49814]
gi|254040911|gb|ACT57706.1| parB-like partition protein [Hirschia baltica ATCC 49814]
Length = 322
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 127/317 (40%), Positives = 176/317 (55%), Gaps = 22/317 (6%)
Query: 1 MSNNYSK---------RRLGRGLAALIGEVNQSIDSPEKKTETIPES------QDCISIH 45
M+ + +K RLGRGL LIGE DS KKT S I I
Sbjct: 1 MAKDINKEDAAPKAKPSRLGRGLMDLIGEQALQPDSAAKKTVPASGSGLAKLNALEIPIK 60
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG---LYKIIAGERRFRAAK 102
SI NP+ PR F+ E L +L SI+ G+IQP++VR N Y+I+AGERR+RAA
Sbjct: 61 SITGNPNQPRQTFKEEDLAELEASIRIKGVIQPILVRPDPNKGDGKYQIVAGERRWRAAT 120
Query: 103 MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
A L VP +I+ +D LEI ++ENVQR DLNPLEEA Y+ LI +G TQ+ + V
Sbjct: 121 RAGLRTVPAVIKELDELEVLEIGVIENVQRADLNPLEEAEAYQSLIKRFGRTQDMLADHV 180
Query: 163 GKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDT 222
GKSR H+AN LR+L LP R+++R+ +S GHAR + DP+ + + ++ +SVRDT
Sbjct: 181 GKSRPHIANTLRLLNLPDEARDLLREGHLSAGHARAALGAPDPMLVVERVMKNGLSVRDT 240
Query: 223 EELVQEQDNKKEKRKKIFEGSRE---KEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCI 278
E+L + E K ++ K+ LE ++ +GLN+ IKH+ NK G+ I
Sbjct: 241 EKLAHKFRMLAENGMKEKSATKPAGHKDVDTEALESDLAHALGLNVEIKHKGNKGGEIKI 300
Query: 279 KYETNEQLKIICSLLGE 295
+Y EQL +C L
Sbjct: 301 QYTQLEQLDDVCRRLTS 317
>gi|115350143|ref|YP_771982.1| parB-like partition proteins [Burkholderia ambifaria AMMD]
gi|115280131|gb|ABI85648.1| chromosome segregation DNA-binding protein [Burkholderia ambifaria
AMMD]
Length = 305
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 179/299 (59%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 9 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALGKLQAGKYQPRTRMDE 63
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 64 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLDEVPVLVKDVSDQA 123
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L +
Sbjct: 124 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAA 183
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 184 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKEAPAVKA 243
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I L N
Sbjct: 244 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVMIDFGNLDALEGILVRLRGN 300
>gi|293608263|ref|ZP_06690566.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828836|gb|EFF87198.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 295
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 178/299 (59%), Gaps = 15/299 (5%)
Query: 1 MSNNYSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR L GRGL AL+G + + E + I ++ + + PR +
Sbjct: 1 MS--IKKRGLAKGRGLDALLGSIQKEKLQLEAQA-LDHGQLKQIDVNLLKRGEYQPRRFI 57
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI+ HG++QP+++R +D+ Y+IIAGERR+RAA++A L+E+P I+R++
Sbjct: 58 HEHDLQELASSIEKHGVMQPIVIRPVDDESHPYEIIAGERRWRAAQLAGLTEIPAIVRDL 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+++ ++ +A++EN+QR+DLNP+++A+ ++ E+G + +I VGK+R+ V+N+LR+L
Sbjct: 118 NDQVAIALALIENIQRQDLNPIDQAIALQRFHDEFGLSHQEIADTVGKARTTVSNLLRLL 177
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L +++ +++ ++ +GHAR + + D L +A++++ K +SVR TE+LV+
Sbjct: 178 SLADEIKDFMQQGQLDMGHARAILTLKGKDQLDVAKIVIEKGLSVRQTEQLVR-----DR 232
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
K + + L +K+S + G N+ I H KG+ I Y T ++L I ++
Sbjct: 233 SEPKQEKEKAPVAPDIEQLTQKLSERFGANVKIDHNQKGKGKLVIHYHTLDELDGILNI 291
>gi|302870724|ref|YP_003839361.1| parB-like partition protein [Micromonospora aurantiaca ATCC 27029]
gi|302573583|gb|ADL49785.1| parB-like partition protein [Micromonospora aurantiaca ATCC 27029]
Length = 346
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 158/284 (55%), Gaps = 5/284 (1%)
Query: 19 GEVNQSIDSPEKKTETIPES-QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
G PE + +P + I + +IVPNP PR+ F+ E LE+L SI+ G +Q
Sbjct: 57 GSTPPPAFEPEPQLSPVPGARFAEIPVDAIVPNPKQPRHVFDEEALEELKTSIQEVGFLQ 116
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P++VR +D ++++ GERR+RAA+ +P I+R+ + + L A++EN+ R +LNP
Sbjct: 117 PIVVRQLDPEKFELVMGERRWRAAQAVGRETIPAIVRDTKDDAMLRDALLENIHRANLNP 176
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA Y+QL+ E+G T ++ +G+SR ++N +R++ LP +V+ + +S GHAR
Sbjct: 177 LEEAAAYQQLLEEFGATHEELARRIGRSRPQISNTIRLMNLPPAVQRRVAAGVLSAGHAR 236
Query: 198 TLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK-KIFEGSREKEKYLTDL 253
L+S + + A+ IV + ++VR EELV ++ + + LTDL
Sbjct: 237 ALLSLDNAEAQEALAERIVREGITVRGAEELVHLALAEEPAKTAAAKRRPKPHAPALTDL 296
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + +KG+ I++ T + L+ I ++G +
Sbjct: 297 ADRLSDRFDTRVKVDIGRSKGKITIEFATVDDLERIVGIIGVGE 340
>gi|171315835|ref|ZP_02905066.1| parB-like partition protein [Burkholderia ambifaria MEX-5]
gi|171099024|gb|EDT43809.1| parB-like partition protein [Burkholderia ambifaria MEX-5]
Length = 297
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 105/299 (35%), Positives = 179/299 (59%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + +++ + + PR +
Sbjct: 1 MNAVPKKKGLGRGLEALLGGSADITEAV-----KIEGAPNTLALGKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GSLQELAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLDEVPVLVKDVSDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L +
Sbjct: 116 AAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAA 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKEAPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ LE+++S + + IK R +GQ I + + L+ I L N
Sbjct: 236 RAKDDGGRD--TRRLEEELSDLLASTVKIKLGRRGRGQVMIDFGNLDALEGILVRLRGN 292
>gi|325473631|gb|EGC76821.1| ParB family protein [Treponema denticola F0402]
Length = 298
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 167/302 (55%), Gaps = 11/302 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL AL+ E + ++ +S I + PNP+ PR F+
Sbjct: 1 MA---KKSALGRGLNALL-EEQPANHVIQESLNISEDSIINIDPKLLQPNPYQPRKTFDE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E + +L +SIK HGIIQP++ ++ Y IIAGERR RAA L VPVI+R+ + K
Sbjct: 57 EKINELAESIKEHGIIQPIVAEKHEDKGYFIIAGERRTRAAISLGLETVPVILRSFEEKK 116
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A++EN+QR+DLN ++EAL Y++++ Q ++ VGKSRS + N LRILKLP
Sbjct: 117 KLEVALIENIQREDLNAIDEALAYQEIMELAAINQEELAKRVGKSRSAITNSLRILKLPE 176
Query: 181 SVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+++ +R +I+ GHAR ++V+ +D L I+ ++SVR+ E + + ++ +
Sbjct: 177 EMKDALRVNKITAGHARSLLSIVNPADQKILFSRILESELSVREAESMAADLNSGIGRIT 236
Query: 238 KIFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + + L D+E++ + +G + IK KG I Y + + L ++ +
Sbjct: 237 KKQKKETSSLSTDDFELRDIEQQFINSLGTKVQIKGNLKKGVVEISYFSKDDLDMLYKKI 296
Query: 294 GE 295
Sbjct: 297 NS 298
>gi|262372460|ref|ZP_06065739.1| chromosome partitioning protein [Acinetobacter junii SH205]
gi|262312485|gb|EEY93570.1| chromosome partitioning protein [Acinetobacter junii SH205]
Length = 295
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 181/299 (60%), Gaps = 15/299 (5%)
Query: 1 MSNNYSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR L GRGL AL+G + + E + I ++S+ + PR +
Sbjct: 1 MS--IKKRGLAKGRGLDALLGSIQKEKLQLEAQA-LDHGQLKQIDVNSLKRGEYQPRRFI 57
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ + L++L SI+ HG++QP+++R +D Y+IIAGERR+RAA MA L+E+P I+R +
Sbjct: 58 QEQDLQELASSIEKHGVMQPIVIRPVDDEQHPYEIIAGERRWRAAIMAGLTEIPAIVREL 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+++ ++ +A++EN+QR+DLNP+++AL ++ E+G + +I VGK+R+ V+N+LR+L
Sbjct: 118 NDQVAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIADTVGKARTTVSNLLRLL 177
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L +++ +++ +I +GHAR + + T + + +A++++ K +SVR TE+LV+E
Sbjct: 178 SLADPIKDYMQQGQIDMGHARAILTLKTKEQIEVAKIVIEKGLSVRQTEQLVREWSE--- 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
K + + + L +K+S + G N+ I H KG+ I Y + ++L I ++
Sbjct: 235 --PKPEKEKVKISSDIEQLTQKLSERFGANVKIDHNQQGKGKMVIHYHSLDELDGILNI 291
>gi|239828702|ref|YP_002951326.1| parB-like partition protein [Geobacillus sp. WCH70]
gi|239808995|gb|ACS26060.1| parB-like partition protein [Geobacillus sp. WCH70]
Length = 285
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 108/289 (37%), Positives = 170/289 (58%), Gaps = 15/289 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL + T E+ + I + PNP+ PR F E +E+L
Sbjct: 3 KGLGKGIDALFSNL----------TLKEEETIKEVDIRELHPNPYQPRKVFHQEAIEELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI HGI+QPLIVR ++I+ GERR+RAAK A+L VPV++R + ++ +E+A++
Sbjct: 53 QSILQHGILQPLIVRK-SIKGFEIVVGERRYRAAKEANLKTVPVVVRELTDEQMMELALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L+ + TQ +I S VGKSR H+AN LR+L LP V++M+
Sbjct: 112 ENLQREDLNPIEEAMAYKMLMEKLQLTQEEIASRVGKSRPHIANHLRLLSLPKDVQKMLV 171
Query: 188 KEEISLGHARTLVSTSDPLSLAQ---VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+S+GH R L+ + I+ ++++VR E+L+QE + R+
Sbjct: 172 DGTLSMGHGRALLGLKHKNKMKFVVDRIIREQLNVRQLEKLIQEMNKN-VSRETPKRKPV 230
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
EK +L + E + K G N++IK KG+ I++ ++E L+ I LL
Sbjct: 231 EKSVFLKESESLLREKFGTNVTIKQTRKKGKIEIEFFSSEDLERILELL 279
>gi|255023238|ref|ZP_05295224.1| ParB family chromosome partioning protein [Listeria monocytogenes
FSL J1-208]
Length = 283
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 95/286 (33%), Positives = 159/286 (55%), Gaps = 12/286 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL +T E+ I+I I PNP+ PR F+++ + +L
Sbjct: 3 KGLGKGINALF-----------NNVDTNEETVQNIAIKDIKPNPYQPRKIFDTKAINELR 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R D G Y+I+ GERR+RAAK A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNTDKG-YEIVVGERRYRAAKEAKLKEIPAVVRDLTEEEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ + G TQ + VGKSR ++AN +R+L LP V+ M+R
Sbjct: 111 ENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ +L +N E +
Sbjct: 171 DGSLSAGHGRVLLGLKLKKNIVPTAKKAVAQGLTVRQLEDVVNNLNENVSRETIKPARVP 230
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 231 IFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 276
>gi|293602665|ref|ZP_06685106.1| chromosome partitioning protein ParB [Achromobacter piechaudii ATCC
43553]
gi|292818856|gb|EFF77896.1| chromosome partitioning protein ParB [Achromobacter piechaudii ATCC
43553]
Length = 307
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 108/299 (36%), Positives = 174/299 (58%), Gaps = 8/299 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQ-DCISIHSIVPNPHNPRNYFE 59
M+ K LGRGL AL+G +ID+ K PE + I + + PR +
Sbjct: 1 MATKKPK-GLGRGLDALLGADAPAIDNIGKAVAAKPEGPPSTLPISKMRAGKYQPRTRMD 59
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAID---NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L +L +SI++ GI+QP++VRA+ G Y+IIAGERRFRAA++A L EVPV++R V
Sbjct: 60 EGALGELAESIRTQGIMQPILVRALGETAPGHYEIIAGERRFRAAQLAGLKEVPVLVREV 119
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++++ +A++EN+QR+DLNPLEEA G +L+ E+G T +G+SRS +N+LR+L
Sbjct: 120 ADENAAVMALIENIQREDLNPLEEAHGVRRLLDEFGLTHEQAAQAIGRSRSATSNLLRLL 179
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L + V+ M+ ++ +GHAR L V + + LA I+++++SVR+ E+LV + + E
Sbjct: 180 NLAAPVQTMLLAGDVDMGHARALLAVDAATQIQLANQIIARRLSVREAEKLVAKTAKEAE 239
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+ + + LT LE+ +S +G +++K KGQ I + E L +
Sbjct: 240 SAASPRKKANGVSRDLTRLEEALSDHLGTRVALKVGAKEKGQIVIDFHGWEHLNSLLER 298
>gi|326390374|ref|ZP_08211933.1| parB-like partition protein [Thermoanaerobacter ethanolicus JW 200]
gi|325993651|gb|EGD52084.1| parB-like partition protein [Thermoanaerobacter ethanolicus JW 200]
Length = 286
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 113/291 (38%), Positives = 181/291 (62%), Gaps = 16/291 (5%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LGRGL ALI E + + I+I I PN + PR F+ E L++L
Sbjct: 4 KKGLGRGLQALIPEYQTEE----------LQGVETINIAYIHPNQYQPRKQFDEESLKEL 53
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
+SIK HG+IQP+IVR +D+G Y+I+AGERR+RAAK+A LSE+P I+++ D+ +EIA+
Sbjct: 54 AESIKQHGVIQPIIVRKVDSG-YQIVAGERRWRAAKIAGLSEIPAIVKDFDDLQIMEIAL 112
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLNP+EEA Y+ LI ++ TQ +I +GKSRS +AN +R+L L V+EM+
Sbjct: 113 IENLQREDLNPIEEAKAYKALIEQFNLTQEEISKKIGKSRSVIANSIRLLNLDDRVQEML 172
Query: 187 RKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
K +I++GHA+ + + S A+ +V + ++VR+TE LV+ K EK K +
Sbjct: 173 VKGDITIGHAKVILSLPNKSLQYEAAKKVVEENLNVRETENLVKNLLRKNEKITKKLKLD 232
Query: 244 REKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+ + ++ ++E + S +G + I + ++G I+Y + E L I ++
Sbjct: 233 K-IDVHVKEIEDNLCSFLGTKVKISQRSKDRGIIQIEYYSEEDLTRIIEII 282
>gi|255283801|ref|ZP_05348356.1| stage 0 sporulation protein J [Bryantella formatexigens DSM 14469]
gi|255265684|gb|EET58889.1| stage 0 sporulation protein J [Bryantella formatexigens DSM 14469]
Length = 302
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 116/303 (38%), Positives = 177/303 (58%), Gaps = 14/303 (4%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTE------TIPESQDCISIHSIVPNPHNPRN 56
K LG+GL LI ++ K+ + + I + PN PR
Sbjct: 1 MAVKKTGLGKGLDVLIPSDSKKTVPLRKENNHAAAVIPAKDGVQELKISEVEPNRQQPRK 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
F+ + L +L +SIK G+IQPLIV+ D Y+IIAGERR+RAAK A + ++PVIIR
Sbjct: 61 NFDEDALLELSESIKQFGVIQPLIVQKRD-DHYEIIAGERRWRAAKKAGVKKIPVIIREY 119
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ + +EI+++EN+QR+DLNP+EEA Y++L+ EY Q+++ V KSR+ V N LR+L
Sbjct: 120 NPQEVMEISLIENIQREDLNPIEEAQAYKRLLEEYHLKQDEVAEKVSKSRTTVTNSLRLL 179
Query: 177 KLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
KL V++M+ + IS GHAR L+ + A I +KMSVRDTE+LV+ NKK
Sbjct: 180 KLDDRVQQMVIDDMISTGHARALLGLEDKEEQYVAAVKIFDEKMSVRDTEKLVKLLQNKK 239
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
++ K + D+E+KI + +G +++ HR NNKG+ I+Y +NE+L+ I +
Sbjct: 240 PEKVKEEPAN---SFIYKDIEEKIKAILGTKVTVDHRANNKGKITIEYYSNEELERIVEM 296
Query: 293 LGE 295
+
Sbjct: 297 MES 299
>gi|118620072|ref|YP_908404.1| chromosome partitioning protein ParB [Mycobacterium ulcerans Agy99]
gi|118572182|gb|ABL06933.1| chromosome partitioning protein ParB [Mycobacterium ulcerans Agy99]
Length = 327
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 97/326 (29%), Positives = 164/326 (50%), Gaps = 29/326 (8%)
Query: 1 MSNNYSKRR-LGRGLAALIGEVNQSIDS--------------------PEKKTETIPESQ 39
M+ ++ LGRGLA+LI +S P +
Sbjct: 1 MTQPSRRKGGLGRGLASLIPTGPAEGESGAQGFGPRMGSAAADVVIGGPVADAAAMGAVY 60
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL----YKIIAGE 95
I+ I NP PR F+ E L +L SI+ G++QP++VRA+D Y+I+ GE
Sbjct: 61 REIAPGDIEANPRQPRQVFDEEALSELVHSIREFGLLQPIVVRAVDGAQSGAPYQIVMGE 120
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAA+ A L+ +P I+R + + L A++EN+ R LNPLEEA Y+QL+ E+G T
Sbjct: 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS----TSDPLSLAQV 211
+++ + +G+SR + N++R+LKLP V+ + +S GHAR L+S LA
Sbjct: 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN 271
IV++ +SVR TEE V + + L D+ ++S+ +++
Sbjct: 241 IVAEGLSVRATEEAVTLANRSDASTSTPPRRKPIQMPGLQDVADRLSNAFDTRVTVSLGK 300
Query: 272 NKGQFCIKYETNEQLKIICSLLGEND 297
KG+ +++ + + L+ I ++ + +
Sbjct: 301 RKGKIVVEFGSVDDLQRIIGIMTDAE 326
>gi|262370373|ref|ZP_06063699.1| chromosome partitioning protein parB [Acinetobacter johnsonii
SH046]
gi|262314715|gb|EEY95756.1| chromosome partitioning protein parB [Acinetobacter johnsonii
SH046]
Length = 295
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 95/295 (32%), Positives = 176/295 (59%), Gaps = 13/295 (4%)
Query: 5 YSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
KR L GRGL AL+G + + E + I +H + + PR + +
Sbjct: 3 VKKRGLAKGRGLDALLGSIQKEKLQLEAQA-LDHGQLKQIDVHLLQRGEYQPRRFINEQD 61
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI+ HG++QP+++R IDN Y+IIAGERR+RAA++A L++VP I+R++ ++
Sbjct: 62 LQELAASIEKHGVMQPIVIRPIDNEKHPYEIIAGERRWRAAQLAGLTQVPAIVRDLTDQV 121
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+++A+ ++ E+G + +I VGK+R+ V+N+LR+L L
Sbjct: 122 AIALALIENIQRQDLNPIDQAMALQRFHEEFGLSHQEIADTVGKARTTVSNLLRLLSLAE 181
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++ +++ + +GHAR + + D L +A++++ K +SVR TE+ V++ + K
Sbjct: 182 QVKDFMQQGLLDMGHARAILTLKGKDQLKVAELVIEKSLSVRQTEQYVRDLNA-----PK 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSL 292
+ E L L ++++ + N+ I H KG+ I Y + ++L I ++
Sbjct: 237 QEKSKTEIAPDLQQLTQRLTDRFSANVKIDHNKQGKGKLTIHYHSLDELDGILNI 291
>gi|168214838|ref|ZP_02640463.1| stage 0 sporulation protein J [Clostridium perfringens CPE str.
F4969]
gi|170713737|gb|EDT25919.1| stage 0 sporulation protein J [Clostridium perfringens CPE str.
F4969]
Length = 286
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 104/291 (35%), Positives = 169/291 (58%), Gaps = 10/291 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E N + EK I + I N PR +F++ L +
Sbjct: 3 KKFGLGKGLGALIPEDNIKEEKKEK------GGIINIELKDIKANKKQPRKFFDNNKLNE 56
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +S+K HGIIQPLI++ + G I AGERR+RAAK+A L+EVP +I ++ ++ L+++
Sbjct: 57 LAESVKEHGIIQPLILKKEEKGYSII-AGERRYRAAKIAELTEVPALIMDISDEKLLQVS 115
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EE L YE+L+ E+ TQ ++ +GKSR+ + N +R+LKL V+E
Sbjct: 116 LIENIQREDLNPIEEGLAYERLLKEFALTQEELSKTMGKSRTTITNTMRLLKLDDRVKEY 175
Query: 186 IRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ + IS GH R ++ +AQ I+ +SVR+TE++V++ N +K E
Sbjct: 176 VMEGVISEGHGRAILPLENEAQYEIAQKIIDNSLSVRETEKVVKKILND-AVEEKTSERR 234
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ Y D+ ++ G +++ NKG+ I+Y + E L+ I ++
Sbjct: 235 KPLNPYYKDVRDRLQDHFGTKVNLNANKNKGKIEIEYYSEEDLQRILDIIN 285
>gi|295426135|ref|ZP_06818802.1| chromosome partitioning protein SpoOJ [Lactobacillus amylolyticus
DSM 11664]
gi|295064171|gb|EFG55112.1| chromosome partitioning protein SpoOJ [Lactobacillus amylolyticus
DSM 11664]
Length = 294
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 108/293 (36%), Positives = 167/293 (56%), Gaps = 19/293 (6%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRG+ AL + Q + E +S+ I PNP+ PR F+++ L++
Sbjct: 12 KKGGLGRGIEALFEDEPQIDTTEE---------VQDLSLDEIRPNPYQPRKNFDNKSLKE 62
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK +G+ QP+IVR Y+IIAGERR RA+K+A +P IIRN D +E+A
Sbjct: 63 LADSIKENGVFQPIIVRK-SINGYEIIAGERRCRASKLAKKKTIPAIIRNFDESQMMEVA 121
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL PLEEA YE L G TQ ++ +GKSR ++AN LR+L LPS + +
Sbjct: 122 VLENLQREDLTPLEEAQAYEMLQKNLGLTQEEVSKRMGKSRPYIANYLRLLTLPSKTKRL 181
Query: 186 IRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ E+S+G ART L +A+ +V + M VR E LV + ++ KK +
Sbjct: 182 LQHGELSMGQARTLLGLKDKDKIDEVAKRVVKQGMPVRKVEALVAQINS-----KKPRKK 236
Query: 243 SREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ K ++ E ++++K GLN++I + KG I + + ++L I +LG
Sbjct: 237 TVRKSAFIRASESQLANKFGLNVNISESKKGKGHLSIDFASTDELNRILDILG 289
>gi|259501224|ref|ZP_05744126.1| chromosome partitioning protein SpoOJ [Lactobacillus iners DSM
13335]
gi|302191032|ref|ZP_07267286.1| chromosome partitioning protein [Lactobacillus iners AB-1]
gi|325911321|ref|ZP_08173734.1| stage 0 sporulation protein J [Lactobacillus iners UPII 143-D]
gi|325913589|ref|ZP_08175954.1| stage 0 sporulation protein J [Lactobacillus iners UPII 60-B]
gi|259167351|gb|EEW51846.1| chromosome partitioning protein SpoOJ [Lactobacillus iners DSM
13335]
gi|325476881|gb|EGC80034.1| stage 0 sporulation protein J [Lactobacillus iners UPII 143-D]
gi|325477168|gb|EGC80315.1| stage 0 sporulation protein J [Lactobacillus iners UPII 60-B]
Length = 292
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 12/296 (4%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M + LGRGL AL + + D E I + I PNP+ PR F+
Sbjct: 1 MEKRSKGFKSLGRGLEALFDDGPKIKD---------GEEIRDIKLDDIRPNPYQPRKNFD 51
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+GL++L +SIK +G+ QP+IVR Y++IAGERRFRA+K+A +P I+R+ D
Sbjct: 52 DKGLQELAESIKENGVFQPIIVRK-SVEGYELIAGERRFRASKIAGKETIPGIVRDFDEA 110
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+E+AI+EN+QR+DL PLEEA YE L G TQ D+ +GKSR ++AN LR+L LP
Sbjct: 111 KMMEVAILENLQREDLTPLEEAQAYETLQKNLGLTQEDVSKRLGKSRPYIANYLRLLTLP 170
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ +++ ++S+G ARTL+ D + + L + K ++
Sbjct: 171 PKTKRLLQYGKLSMGQARTLLGLKDKSQIDSLAKKVADEGTTVRRLELLVNKINTKSQEK 230
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
K K++ E K+S K G ++I N G I +++ E+L I +LG
Sbjct: 231 SRKVTNKSKFIAASENKLSDKFGTKVNISSSNRGNGHLSISFKSTEELNRILDVLG 286
>gi|309805114|ref|ZP_07699167.1| stage 0 sporulation protein J [Lactobacillus iners LactinV 09V1-c]
gi|309806393|ref|ZP_07700405.1| stage 0 sporulation protein J [Lactobacillus iners LactinV 03V1-b]
gi|309808176|ref|ZP_07702086.1| stage 0 sporulation protein J [Lactobacillus iners LactinV 01V1-a]
gi|309809008|ref|ZP_07702882.1| stage 0 sporulation protein J [Lactobacillus iners SPIN 2503V10-D]
gi|312873509|ref|ZP_07733559.1| stage 0 sporulation protein J [Lactobacillus iners LEAF 2052A-d]
gi|315653260|ref|ZP_07906183.1| chromosome partitioning protein SpoOJ [Lactobacillus iners ATCC
55195]
gi|329920827|ref|ZP_08277414.1| stage 0 sporulation protein J [Lactobacillus iners SPIN 1401G]
gi|308165568|gb|EFO67798.1| stage 0 sporulation protein J [Lactobacillus iners LactinV 09V1-c]
gi|308167224|gb|EFO69391.1| stage 0 sporulation protein J [Lactobacillus iners LactinV 03V1-b]
gi|308168557|gb|EFO70665.1| stage 0 sporulation protein J [Lactobacillus iners LactinV 01V1-a]
gi|308170664|gb|EFO72683.1| stage 0 sporulation protein J [Lactobacillus iners SPIN 2503V10-D]
gi|311091018|gb|EFQ49412.1| stage 0 sporulation protein J [Lactobacillus iners LEAF 2052A-d]
gi|315489423|gb|EFU79062.1| chromosome partitioning protein SpoOJ [Lactobacillus iners ATCC
55195]
gi|328935607|gb|EGG32074.1| stage 0 sporulation protein J [Lactobacillus iners SPIN 1401G]
Length = 292
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 12/296 (4%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M + LGRGL AL + + D E I + I PNP+ PR F+
Sbjct: 1 MEKRSKGFKSLGRGLEALFDDGPKIKD---------GEEIRDIKLDDIRPNPYQPRKNFD 51
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+GL++L +SIK +G+ QP+IVR Y++IAGERRFRA+K+A +P I+R+ D
Sbjct: 52 DKGLQELAESIKENGVFQPIIVRK-SVEGYELIAGERRFRASKIAGKETIPGIVRDFDEA 110
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+E+AI+EN+QR+DL PLEEA YE L G TQ D+ +GKSR ++AN LR+L LP
Sbjct: 111 KMMEVAILENLQREDLTPLEEAQAYETLQKNLGLTQEDVSKRLGKSRPYIANYLRLLTLP 170
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ +++ ++S+G ARTL+ D + + L + K ++
Sbjct: 171 PKTKRLLQYGKLSMGQARTLLGLKDKSQIDGLAKKVADEGTTVRRLELLVNKINTKSQEQ 230
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
K K++ E K+S K G ++I N G I +++ E+L I +LG
Sbjct: 231 SRKVTNKSKFIAASENKLSDKFGTKVNISSSNRGNGHLSISFKSTEELNRILDVLG 286
>gi|255527656|ref|ZP_05394515.1| parB-like partition protein [Clostridium carboxidivorans P7]
gi|296186795|ref|ZP_06855196.1| ParB-like partition protein [Clostridium carboxidivorans P7]
gi|255508636|gb|EET85017.1| parB-like partition protein [Clostridium carboxidivorans P7]
gi|296048509|gb|EFG87942.1| ParB-like partition protein [Clostridium carboxidivorans P7]
Length = 288
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 100/289 (34%), Positives = 163/289 (56%), Gaps = 6/289 (2%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI + S + +S I+I+ I N + PR F+ +
Sbjct: 3 KKFGLGKGLGALIPDQPIS-----ENESKTNDSVSLININLIKANGNQPRKNFDEHKIIQ 57
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK HGIIQP++++A D Y IIAGERR+RAAK+A + EVP II ++ +K LE++
Sbjct: 58 LSESIKEHGIIQPIVLKA-DGDTYSIIAGERRWRAAKIAGIKEVPAIIMDLSDKEILEVS 116
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEAL Y++LI ++ TQ ++ + +GKSR+ V N+LR+L + V++
Sbjct: 117 LIENIQRQDLNPIEEALAYKRLIEDFKLTQEELSNRIGKSRTSVTNLLRLLNIDDRVKDY 176
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ IS GHAR L+S + ++ + + N K+ + +
Sbjct: 177 LIDGVISEGHARALLSLENKDVQYELAQEIIDEGLSVRQTEKLIKNLSSKKALPTKQVND 236
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
Y D++ K+ + + + + NKG+ I+Y +NE L+ I +L
Sbjct: 237 LNPYYVDIKNKLENLFRTKVQLSDKKNKGKIEIEYYSNEDLQRILEILK 285
>gi|32471859|ref|NP_864853.1| chromosome partitioning protein parB [Rhodopirellula baltica SH 1]
gi|32397230|emb|CAD72537.1| probable chromosome partitioning protein parB [Rhodopirellula
baltica SH 1]
Length = 329
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 94/306 (30%), Positives = 160/306 (52%), Gaps = 14/306 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD--CISIHSIVPNPHNPRNYFE 59
+ RRLG+GLAAL+GE I P + + I S+ NP PR F
Sbjct: 14 APAGKDRRLGKGLAALLGEPMDDIVPPGETNNAPKPGVQSLELPIDSVEANPFQPRREFN 73
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ + L +SIK+H +QP++VR +D Y++I+GERR RA A L + +R D++
Sbjct: 74 PDEIASLAESIKNHQQLQPILVRIVDGR-YQLISGERRLRATIHAGLKTIRAEVREADDR 132
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
E+AI+EN+QRKDLN +E+A+ +++ I E+ Q+D+ + RS +AN++R+L+LP
Sbjct: 133 LVAELAIIENLQRKDLNAIEKAMSFKRYIDEHKCKQDDLARRLSIDRSTIANLMRLLELP 192
Query: 180 SSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ EM+ E++ GHAR + ++ A+ I+ + SVR TE V E +E
Sbjct: 193 QPIVEMVTSGELTAGHARALLPIGEVEVQVATAKKILEEGWSVRKTETGVAELLRAEEDS 252
Query: 237 KK-------IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKI 288
+ + ++ +++++ G + IK ++G+ I + E+ +
Sbjct: 253 DTGLKVTNVSRQKRKPVPPHIEAMQQEMRMVFGTKVEIKASARSRGKITIHFSDAEEFER 312
Query: 289 ICSLLG 294
I LLG
Sbjct: 313 IRGLLG 318
>gi|323344332|ref|ZP_08084557.1| chromosome partitioning protein SpoOJ [Prevotella oralis ATCC
33269]
gi|323094459|gb|EFZ37035.1| chromosome partitioning protein SpoOJ [Prevotella oralis ATCC
33269]
Length = 301
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 105/302 (34%), Positives = 169/302 (55%), Gaps = 17/302 (5%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S++ LGRGL ALI S E + + I+I I NP+ PR F+ E
Sbjct: 8 SSSTKNNALGRGLDALI--------STEGVRTQGSSTINEIAIDEIEANPNQPRREFDEE 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L +L SI+ GIIQP+ +R + ++IIAGERR+RA+++A L +P IR +D++S
Sbjct: 60 ALRELAMSIREIGIIQPITLRQVAGNRFQIIAGERRWRASQLAGLKAIPAYIRTIDDESV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L+ + G TQ + VGKSR+ +AN LR+L+LP+
Sbjct: 120 MEMALVENIQREDLNAIEIALAYEHLMEDTGMTQEKVSERVGKSRTAIANYLRLLRLPAQ 179
Query: 182 VREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR-- 236
V+ ++K+EI +GHAR L+ S S + + + SVR EE+V++ + ++ +
Sbjct: 180 VQMALQKKEIDMGHARALLSLDSPSQQIKVFNEVQKNGFSVRKVEEIVKQLKSGEDIQAG 239
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC---SL 292
K + + L+K++S + + + + KG+ I + E L+ I
Sbjct: 240 SKKIVAKTKMPEEFIVLKKQLSQFLNVKVQLTCSSKGKGKISIPFADEEDLERIMHIFDK 299
Query: 293 LG 294
L
Sbjct: 300 LK 301
>gi|168218046|ref|ZP_02643671.1| stage 0 sporulation protein J [Clostridium perfringens NCTC 8239]
gi|182379935|gb|EDT77414.1| stage 0 sporulation protein J [Clostridium perfringens NCTC 8239]
Length = 286
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 106/291 (36%), Positives = 168/291 (57%), Gaps = 10/291 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E N + EK I + I N PR +F++ L +
Sbjct: 3 KKFGLGKGLGALIPEDNIKEEKKEK------GGIINIELKDIKANKKQPRKFFDNNKLNE 56
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +S+K HGIIQPLI++ + G I AGERR+RAAK+A L EVP +I ++ ++ L+I+
Sbjct: 57 LAESVKEHGIIQPLILKKEEKGYSII-AGERRYRAAKIAELKEVPALIMDISDEKLLQIS 115
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EE L YE+L+ E+ TQ ++ +GKSR+ + N +R+LKL V+E
Sbjct: 116 LIENIQREDLNPIEEGLAYERLLKEFALTQEELSKTMGKSRTTITNTMRLLKLDDRVKEY 175
Query: 186 IRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ + IS GH R ++ +AQ I+ +SVR+TE+LV++ N +K E
Sbjct: 176 VMEGVISEGHGRAILPLENEAQYEIAQKIIDNSLSVRETEKLVKKILND-AVEEKTSERR 234
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ Y D+ ++ G +++ NKG+ I+Y + E L+ I ++
Sbjct: 235 KPLNPYYKDVRDRLQDHFGTKVNLNANKNKGKIEIEYYSEEDLQRILDIIN 285
>gi|325983679|ref|YP_004296081.1| parB-like partition protein [Nitrosomonas sp. AL212]
gi|325533198|gb|ADZ27919.1| parB-like partition protein [Nitrosomonas sp. AL212]
Length = 279
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 108/290 (37%), Positives = 179/290 (61%), Gaps = 17/290 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
++ LGRGL AL+ + ES I + P + PR + L +
Sbjct: 3 KQKGLGRGLDALLSGSAD--------VALVEESLQSIETSRLQPGKYQPRTNMDQVALTE 54
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK+ GI+QP++VR ID G Y+IIAGERR+RAA++A L+EVP +IR V ++S+L ++
Sbjct: 55 LAESIKAQGIMQPILVRPIDEGRYEIIAGERRWRAAQLAGLNEVPALIRKVADESALAMS 114
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR++LNPLEEA+G ++LI+E+G T G +G SRS ++N+LR+L L + V+E+
Sbjct: 115 LIENIQRENLNPLEEAMGIQRLINEFGMTHQTAGEALGNSRSTISNLLRLLNLSAPVQEL 174
Query: 186 IRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ + +I +GH R L+S + + LA +I K++SVR+TE+LV + +
Sbjct: 175 MMQGKIDMGHGRALLSLAPAQQVKLAHIIAQKQLSVRETEKLVNQI------EHPTPKKI 228
Query: 244 REKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
++ ++ L L++ +S ++G ++IK +N +G I Y + +QL I S
Sbjct: 229 KKTDRDLLRLQEDVSERLGAQVAIKPQKNGQGNIVIHYTSLDQLDDILSK 278
>gi|309803397|ref|ZP_07697492.1| stage 0 sporulation protein J [Lactobacillus iners LactinV 11V1-d]
gi|312871100|ref|ZP_07731202.1| stage 0 sporulation protein J [Lactobacillus iners LEAF 3008A-a]
gi|312872123|ref|ZP_07732198.1| stage 0 sporulation protein J [Lactobacillus iners LEAF 2062A-h1]
gi|312875283|ref|ZP_07735291.1| stage 0 sporulation protein J [Lactobacillus iners LEAF 2053A-b]
gi|308164561|gb|EFO66813.1| stage 0 sporulation protein J [Lactobacillus iners LactinV 11V1-d]
gi|311089117|gb|EFQ47553.1| stage 0 sporulation protein J [Lactobacillus iners LEAF 2053A-b]
gi|311092416|gb|EFQ50785.1| stage 0 sporulation protein J [Lactobacillus iners LEAF 2062A-h1]
gi|311093428|gb|EFQ51770.1| stage 0 sporulation protein J [Lactobacillus iners LEAF 3008A-a]
Length = 292
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 12/296 (4%)
Query: 1 MSNNYSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M + LGRGL AL + + D E I + I PNP+ PR F+
Sbjct: 1 MEKRSKGFKSLGRGLEALFDDGPKIKD---------GEEIRDIKLDDIRPNPYQPRKNFD 51
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+GL++L +SIK +G+ QP+IVR Y++IAGERRFRA+K+A +P I+R+ D
Sbjct: 52 DKGLQELAESIKENGVFQPIIVRK-SVEGYELIAGERRFRASKIAGKETIPGIVRDFDEA 110
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+E+AI+EN+QR+DL PLEEA YE L G TQ D+ +GKSR ++AN LR+L LP
Sbjct: 111 KMMEVAILENLQREDLTPLEEAQAYETLQKNLGLTQEDVSKRLGKSRPYIANYLRLLTLP 170
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ +++ ++S+G ARTL+ D + + L + K ++
Sbjct: 171 PKTKRLLQYGKLSMGQARTLLGLKDKSQIDSLAKKVADEGTTVRRLELLVNKINTKSQEQ 230
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
K K++ E K+S K G ++I N G I +++ E+L I +LG
Sbjct: 231 SRKVTNKSKFIAASENKLSDKFGTKVNISSSNRGNGHLSISFKSTEELNRILDVLG 286
>gi|226225340|ref|YP_002759447.1| Partition protein ParB homolg [Listeria monocytogenes Clip81459]
gi|254851906|ref|ZP_05241254.1| chromosome partition protein [Listeria monocytogenes FSL R2-503]
gi|300763452|ref|ZP_07073450.1| ParB family chromosome partition protein [Listeria monocytogenes
FSL N1-017]
gi|225877802|emb|CAS06517.1| Partition protein ParB homolg [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258605202|gb|EEW17810.1| chromosome partition protein [Listeria monocytogenes FSL R2-503]
gi|300515729|gb|EFK42778.1| ParB family chromosome partition protein [Listeria monocytogenes
FSL N1-017]
Length = 283
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 96/286 (33%), Positives = 159/286 (55%), Gaps = 12/286 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL +T E+ I+I I PNP+ PR F+++ + +L
Sbjct: 3 KGLGKGINALF-----------NNVDTNEETVQNIAIKDIKPNPYQPRKIFDTKAINELR 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R D G Y+I+ GERRFRAAK A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNTDKG-YEIVVGERRFRAAKEAKLKEIPAVVRDLTEEEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ + G TQ + VGKSR ++AN +R+L LP V+ M+R
Sbjct: 111 ENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ +L +N E +
Sbjct: 171 DGSLSAGHGRVLLGLKLKKNIIPTAKKTVAQGLTVRQLEDVVNNLNENVSRETIKPARVP 230
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 231 IFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 276
>gi|217966006|ref|YP_002351684.1| stage 0 sporulation protein J [Listeria monocytogenes HCC23]
gi|217335276|gb|ACK41070.1| stage 0 sporulation protein J [Listeria monocytogenes HCC23]
gi|307572378|emb|CAR85557.1| chromosome partition protein, ParB family [Listeria monocytogenes
L99]
Length = 283
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 95/286 (33%), Positives = 159/286 (55%), Gaps = 12/286 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL +T E+ I+I I PNP+ PR F+++ + +L
Sbjct: 3 KGLGKGINALF-----------NNVDTNEETVQNIAIKEIKPNPYQPRKIFDAKAINELR 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R D G Y+I+ GERR+RAAK A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNTDKG-YEIVVGERRYRAAKEAKLKEIPAVVRDLTEEEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ + G TQ + VGKSR ++AN +R+L LP V+ M+R
Sbjct: 111 ENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ +L +N E +
Sbjct: 171 DGSLSAGHGRVLLGLKLKKNIVPTAKKAVAQGLTVRQLEDVINNLNENVSRETIKPARVP 230
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 231 IFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 276
>gi|194334686|ref|YP_002016546.1| parB-like partition protein [Prosthecochloris aestuarii DSM 271]
gi|194312504|gb|ACF46899.1| parB-like partition protein [Prosthecochloris aestuarii DSM 271]
Length = 294
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETI---PESQDCISIHSIVPNPHNPRNYFESE 61
+K+ LG+GL ALI + S ++ + + + + I NP PR F+
Sbjct: 1 MAKKALGKGLKALIPDEGFMPSSSGRERDESWAREGAIGSLPVDRIEINPFQPRKEFDEA 60
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKS 120
LEDL SI +G+IQ I D Y++I+GERR RA K A+ +P I + ++
Sbjct: 61 ALEDLKNSIIENGVIQ-PITVTRDGDGYQLISGERRLRAVKQAAFKFIPAYIIDAPEDAR 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A++EN+QR+DLN +E AL + L++ TQ+D+ VGK+RS V+N LR+LKLP
Sbjct: 120 KLELALIENIQREDLNAIEVALALKSLVTTCNMTQDDVAQKVGKNRSTVSNFLRLLKLPV 179
Query: 181 SVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ I EI+ GHAR L + L + + I+S+K+SVR TEELV ++ +
Sbjct: 180 EIQNSIIVREITQGHARALVNLPNPKLQLKVWEQIISRKLSVRQTEELV---NSLFRDQS 236
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + +E + + + I + + +G+ I+Y + + L+ I LLG
Sbjct: 237 ARKVTASGQSGDYARMESLLRDRFATKVRIVQKKKGQGEIHIQYYSPDDLERILELLG 294
>gi|46908977|ref|YP_015366.1| ParB family chromosome partioning protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47092677|ref|ZP_00230464.1| chromosome partition protein, ParB family [Listeria monocytogenes
str. 4b H7858]
gi|254824844|ref|ZP_05229845.1| chromosome partition protein [Listeria monocytogenes FSL J1-194]
gi|254930936|ref|ZP_05264295.1| chromosome partition protein [Listeria monocytogenes HPB2262]
gi|255520530|ref|ZP_05387767.1| ParB family chromosome partioning protein [Listeria monocytogenes
FSL J1-175]
gi|46882250|gb|AAT05543.1| chromosome partition protein, ParB family [Listeria monocytogenes
serotype 4b str. F2365]
gi|47018972|gb|EAL09718.1| chromosome partition protein, ParB family [Listeria monocytogenes
str. 4b H7858]
gi|293582483|gb|EFF94515.1| chromosome partition protein [Listeria monocytogenes HPB2262]
gi|293594086|gb|EFG01847.1| chromosome partition protein [Listeria monocytogenes FSL J1-194]
gi|328468264|gb|EGF39270.1| ParB family chromosome partioning protein [Listeria monocytogenes
1816]
gi|328469131|gb|EGF40079.1| ParB family chromosome partioning protein [Listeria monocytogenes
220]
gi|332313220|gb|EGJ26315.1| Stage 0 sporulation protein J [Listeria monocytogenes str. Scott A]
Length = 283
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 96/286 (33%), Positives = 159/286 (55%), Gaps = 12/286 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL +T E+ I+I I PNP+ PR F+++ + +L
Sbjct: 3 KGLGKGINALF-----------NNVDTNEETVQNIAIKDIKPNPYQPRKIFDTKAINELR 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R D G Y+I+ GERRFRAAK A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNTDKG-YEIVVGERRFRAAKEAKLKEIPAVVRDLTEEEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ + G TQ + VGKSR ++AN +R+L LP V+ M+R
Sbjct: 111 ENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ +L +N E +
Sbjct: 171 DGSLSAGHGRVLLGLKLKKNIIPTAKKAVAQGLTVRQLEDVVNNLNENVSRETIKPARVP 230
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 231 IFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 276
>gi|295707333|ref|YP_003600408.1| stage 0 sporulation protein J [Bacillus megaterium DSM 319]
gi|294804992|gb|ADF42058.1| stage 0 sporulation protein J [Bacillus megaterium DSM 319]
Length = 289
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 96/291 (32%), Positives = 166/291 (57%), Gaps = 16/291 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL ++ D +S ++IH + PNP+ PR F E + +L
Sbjct: 3 KGLGKGINALFSGLDAQAD----------DSIQEVAIHELRPNPYQPRKTFNKEAINELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI HGI+QP++ R Y+I+AGERRFRAAK A L+ VPVII++ K +E+A++
Sbjct: 53 QSILHHGILQPIVARK-SIKGYEILAGERRFRAAKEADLATVPVIIKDFSEKQMMELALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL P+EEA Y+ L+ + TQ + + +GKSR H+AN +R+L+LP ++ +I
Sbjct: 112 ENLQREDLTPIEEATAYQLLMDKLDMTQEQLATRLGKSRPHIANYVRLLQLPEEIQTLIS 171
Query: 188 KEEISLGHARTLVSTSDP---LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
E+S+GH RTLV + + + I ++++VR E + + ++ + +
Sbjct: 172 TNELSMGHGRTLVGLKNKVLLPKVVEKIRKEQLNVRQLEAYIAHLNK--AVPRETSKTKK 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+K+ ++ E ++ + G ++ I KG+ I++ + E L + L +
Sbjct: 230 DKDLFIKQSETQLRERFGTSVHITQSKKKGKIEIEFFSKEDLNRLLELFND 280
>gi|206901855|ref|YP_002251747.1| stage 0 sporulation protein J [Dictyoglomus thermophilum H-6-12]
gi|206740958|gb|ACI20016.1| stage 0 sporulation protein J [Dictyoglomus thermophilum H-6-12]
Length = 272
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 114/296 (38%), Positives = 175/296 (59%), Gaps = 31/296 (10%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL ALIGE + I I IVPNP PR
Sbjct: 1 MS--LKKKGLGRGLEALIGEEENL--------------IEKIPIEKIVPNPQQPRETLNP 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L +SIK G++QP++VR Y+IIAGERR+ AAK A L E+PVI++++D++S
Sbjct: 45 ETLQELVESIKQLGLLQPILVRPKG-DYYEIIAGERRYHAAKTAGLKEIPVIVKDIDDQS 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +IA+ EN+QR+DLNP+E+A ++ I + TQ ++ + SRS ++N LR+L+LP
Sbjct: 104 AWDIALTENLQREDLNPIEKAKAFQYYIETFKVTQEELAQRLSISRSEISNFLRLLQLPP 163
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++E +R+ ++ GHARTL+S DP AQ I+ +K+SVR+TEELV+ + K E
Sbjct: 164 EIQEEVRRGNLTYGHARTLLSVEDPYIQKLLAQKIIKEKLSVRETEELVKRRKIKDEIDI 223
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSL 292
+ LE+K+ +G + I+ ++ KG+ I+Y++ EQL+ I
Sbjct: 224 ----------PEIRSLEEKMEKYLGTKVKIQPKSPTKGRITIEYKSLEQLEDIIKK 269
>gi|238854399|ref|ZP_04644741.1| stage 0 sporulation protein J [Lactobacillus jensenii 269-3]
gi|260665092|ref|ZP_05865942.1| chromosome partitioning protein [Lactobacillus jensenii SJ-7A-US]
gi|282931803|ref|ZP_06337288.1| stage 0 sporulation protein J [Lactobacillus jensenii 208-1]
gi|313472998|ref|ZP_07813485.1| spoOJ protein [Lactobacillus jensenii 1153]
gi|238833021|gb|EEQ25316.1| stage 0 sporulation protein J [Lactobacillus jensenii 269-3]
gi|239528798|gb|EEQ67799.1| spoOJ protein [Lactobacillus jensenii 1153]
gi|260561146|gb|EEX27120.1| chromosome partitioning protein [Lactobacillus jensenii SJ-7A-US]
gi|281304110|gb|EFA96227.1| stage 0 sporulation protein J [Lactobacillus jensenii 208-1]
Length = 302
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 110/293 (37%), Positives = 165/293 (56%), Gaps = 11/293 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRG+ AL + I TE + +S+ I PNP+ PR F+ + L++
Sbjct: 12 KKGGLGRGIEALFEDTPTQIVQSVDGTE----EVEELSLEDIRPNPYQPRKNFDDKSLKE 67
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK +G+ QP+IVR Y+IIAGERRFRA+K+A S +P IIR+ D +E+A
Sbjct: 68 LSDSIKENGVFQPIIVRK-SLDGYEIIAGERRFRASKLAKKSTIPAIIRDFDEAQMMEVA 126
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL+PLEEA YE L G TQ ++ +GKSR ++AN LR+L LP +++
Sbjct: 127 VLENLQREDLSPLEEAQAYEMLQKNLGLTQEEVSKRMGKSRPYIANYLRLLTLPKKAKKL 186
Query: 186 IRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ E+S+G ART L LA+ +V + + VR E LV + K K K
Sbjct: 187 LQHGELSMGQARTLLGLKDKEKIDDLAKKVVKEGIPVRKLEVLVSAMNEKANKVSK--SD 244
Query: 243 SREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
K ++ E ++S+K G +SI + KG I + + + L I ++LG
Sbjct: 245 KIRKSAFIRASESRLSTKFGSPVSISESKKGKGHLSIDFNSTDDLNRILTMLG 297
>gi|290891972|ref|ZP_06554969.1| partition protein ParB [Listeria monocytogenes FSL J2-071]
gi|290558566|gb|EFD92083.1| partition protein ParB [Listeria monocytogenes FSL J2-071]
Length = 283
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 95/286 (33%), Positives = 159/286 (55%), Gaps = 12/286 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL +T E+ I+I I PNP+ PR F+++ + +L
Sbjct: 3 KGLGKGINALF-----------NNVDTNEETVQNIAIKEIKPNPYQPRKIFDAKAINELR 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R D G Y+I+ GERR+RAAK A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNTDKG-YEIVVGERRYRAAKEAKLKEIPAVVRDLTEEEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ + G TQ + VGKSR ++AN +R+L LP V+ M+R
Sbjct: 111 ENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ +L +N E +
Sbjct: 171 DGSLSAGHGRVLLGLKLKKNIVPTAKKAVAQGLTVRQLEDVVNNLNENVSRETIKPARVP 230
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 231 IFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 276
>gi|296157543|ref|ZP_06840378.1| parB-like partition protein [Burkholderia sp. Ch1-1]
gi|295892315|gb|EFG72098.1| parB-like partition protein [Burkholderia sp. Ch1-1]
Length = 295
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 174/299 (58%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + + + + + PR +
Sbjct: 1 MNAVARKKGLGRGLEALLGGSADITEAV-----AIEGAPNVLPLSKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR + Y+IIAGERRFRAA++A L EVPV+++NV +++
Sbjct: 56 GALQELAASIRAQGLMQPILVRPVSADRYEIIAGERRFRAARLAGLDEVPVLVKNVPDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L S
Sbjct: 116 AAAMALIENIQREDLNPLEEAQGIQRLLDEFNFTHEQAAESVGRSRSAVSNLLRLLNLAS 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLANQVVNKRMSVRETEKLVTTTTRTVPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
++ LE+++S + + IK R +GQ + + + L+ I L N
Sbjct: 236 RANPDGGRD--TRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILVRLRGN 292
>gi|257095884|ref|YP_003169525.1| parB-like partition protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257048408|gb|ACV37596.1| parB-like partition protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 279
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 168/292 (57%), Gaps = 18/292 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+ + E Q + + I P + PR ++ L+
Sbjct: 1 MKMKGLGRGLDALLAGNDA----------QNREQQRALPVGHIQPGKYQPRTRMDAASLD 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ G++QP++VR + Y+IIAGERR+RAA+MA LSEV +IR + ++++L +
Sbjct: 51 ELAASIRVQGLMQPILVRPLGEDRYEIIAGERRWRAAQMAGLSEVSTLIREIPDEAALAM 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR++LNPLEEALG ++LI E+ T VG+SR +N+LR+L+L + +E
Sbjct: 111 ALIENIQRENLNPLEEALGLQRLIDEFSMTHQQAADAVGRSRPAASNLLRLLQLAAPAQE 170
Query: 185 MIRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ EI +GHAR L+ + + LAQ +V K +SVR+TE LVQ +
Sbjct: 171 LLMCGEIDMGHARALLPLAGALQVQLAQRVVQKGLSVRETERLVQYALRAPKDSPPPKPD 230
Query: 243 SREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ + L+++++ +G ++I+ ++ G+ I++ +QL+ I L
Sbjct: 231 -----RDVLRLQEELADLLGAQVAIRANKRGAGKVLIEFGDLDQLEGILQRL 277
>gi|42526122|ref|NP_971220.1| ParB family protein [Treponema denticola ATCC 35405]
gi|41816234|gb|AAS11101.1| ParB family protein [Treponema denticola ATCC 35405]
Length = 297
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 167/302 (55%), Gaps = 12/302 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL AL+ Q + + +S I + PNP+ PR F+
Sbjct: 1 MA---KKSALGRGLNALL--EEQPANQIVESLNISEDSIINIDPKLLQPNPYQPRKTFDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E + +L +SIK HGIIQP++ ++ Y IIAGERR RAA L VPVI+R+ + K
Sbjct: 56 EKISELAESIKEHGIIQPIVAEKHEDKGYFIIAGERRTRAAISLGLETVPVILRSFEEKK 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A++EN+QR+DLN ++EAL Y++++ Q ++ VGKSRS + N LRILKLP
Sbjct: 116 KLEVALIENIQREDLNAIDEALAYQEIMELAAINQEELAKRVGKSRSAITNSLRILKLPE 175
Query: 181 SVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+++ +R +I+ GHAR ++V+ +D L I+ ++SVR+ E + + ++ +
Sbjct: 176 EMKDALRVNKITAGHARSLLSIVNPADQKILFSRILESELSVREAESMAADLNSGIGRIT 235
Query: 238 KIFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + + + L D+E++ + +G + IK KG I Y + + L ++ +
Sbjct: 236 KKQKKETQSLSTDDFELRDIEQQFINSLGTKVQIKGNLKKGVVEISYFSKDDLDMLYKKI 295
Query: 294 GE 295
Sbjct: 296 NS 297
>gi|294501982|ref|YP_003565682.1| stage 0 sporulation protein J [Bacillus megaterium QM B1551]
gi|294351919|gb|ADE72248.1| stage 0 sporulation protein J [Bacillus megaterium QM B1551]
Length = 289
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 96/291 (32%), Positives = 166/291 (57%), Gaps = 16/291 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL ++ D +S ++IH + PNP+ PR F E + +L
Sbjct: 3 KGLGKGINALFSGLDAQAD----------DSIQEVAIHELRPNPYQPRKTFNKEAINELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI HGI+QP++ R Y+I+AGERRFRAAK A L+ VPVII++ K +E+A++
Sbjct: 53 QSILHHGILQPIVARK-SIKGYEILAGERRFRAAKEADLATVPVIIKDFSEKQMMELALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL P+EEA Y+ L+ + TQ + + +GKSR H+AN +R+L+LP ++ +I
Sbjct: 112 ENLQREDLTPIEEATAYQLLMDKLDMTQEQLATRLGKSRPHIANYVRLLQLPEEIQTLIS 171
Query: 188 KEEISLGHARTLVSTSDP---LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
E+S+GH RTLV + + + I ++++VR E + + ++ + +
Sbjct: 172 TNELSMGHGRTLVGLKNKALLPKVVEKIRKEQLNVRQLEAYIAHLNK--AVPRETSKTKK 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+K+ ++ E ++ + G ++ I KG+ I++ + E L + L +
Sbjct: 230 DKDLFIKQSETQLRERFGTSVHITQSKKKGKIEIEFFSKEDLNRLLELFND 280
>gi|189218039|ref|YP_001938681.1| Chromosome (plasmid) partitioning protein, ParB/Spo0J family
[Methylacidiphilum infernorum V4]
gi|189184897|gb|ACD82082.1| Chromosome (plasmid) partitioning protein, ParB/Spo0J family
[Methylacidiphilum infernorum V4]
Length = 309
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 112/296 (37%), Positives = 170/296 (57%), Gaps = 11/296 (3%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+ SKR LG+GL+ LI + SP E E I + I PNP+ PR E
Sbjct: 18 ESMSKRSLGKGLSDLINTKSLFSSSPS---EERGEKISMIKLSHITPNPYQPRKEIHEED 74
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
LED+ QSIK GI+QP+IVR + +++IAGERR+R+A A L +P I+RNV + L
Sbjct: 75 LEDMVQSIKEKGILQPIIVRQLKEDHFELIAGERRWRSATKAGLEVIPAIVRNVSDSDLL 134
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR DLNP+EEA GY +I ++G+TQ + +GK+R+ VAN LR+L L V
Sbjct: 135 ELALIENLQRSDLNPIEEARGYALMIEKFGFTQELVALRLGKNRATVANSLRLLSLSERV 194
Query: 183 REMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+E+I K +S GH + + +A I+ + SVR TEE V + ++
Sbjct: 195 QELIEKGNLSQGHGKVLVGISDRKKQEKVALKIIQEGWSVRKTEEFVSGFAS----SRRK 250
Query: 240 FEGSREKEKY-LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ ++KE L ++E ++ SK+G + IK N G+ I + + + L+ + S LG
Sbjct: 251 QDQGKQKEPDCLKNIETELCSKLGSKVKIKGNKNSGKIEIAFNSFQDLQRVLSFLG 306
>gi|313677833|ref|YP_004055829.1| parb-like partition protein [Marivirga tractuosa DSM 4126]
gi|312944531|gb|ADR23721.1| parB-like partition protein [Marivirga tractuosa DSM 4126]
Length = 305
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 170/304 (55%), Gaps = 12/304 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTE------TIPESQDCISIHSIVPNPHNP 54
M+ ++ LGRGL AL+ + N S K + + S + I + I NP P
Sbjct: 1 MAKKT-RKALGRGLGALLEDSNTDQKSSSNKEKRDITDISSGASINEIPLEQIEVNPFQP 59
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R F+ + LE+L +SIK GIIQP+ VR + Y++I+GERR +A+K+A L +P IR
Sbjct: 60 RTDFDKQALEELAESIKVQGIIQPITVRKLSKDSYQLISGERRTQASKLAGLKSIPAYIR 119
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
D++ LE+A++EN+QR++LN +E AL Y++L++E Q +G VGK+R+ V N LR
Sbjct: 120 IADDQQMLEMALIENIQRENLNSIEIALSYQRLLTECDLKQEQLGDRVGKNRTTVNNYLR 179
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDN 231
+LKLP ++ IR + IS+GHAR +++ + V +SVR E LV+E +
Sbjct: 180 LLKLPPDIQLAIRDKRISMGHARAIINIDNVEKQLDVFNRILKDDLSVRKVEALVRELTS 239
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC 290
E ++K E ++ K+SS G I +K +NNKG+ I + + + L I
Sbjct: 240 -GESKEKEQPAKSEMPYEAKQVQSKLSSHFGTKIGMKIDKNNKGEIKIPFLSKDDLNRIL 298
Query: 291 SLLG 294
+L
Sbjct: 299 DILS 302
>gi|224538094|ref|ZP_03678633.1| hypothetical protein BACCELL_02984 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520305|gb|EEF89410.1| hypothetical protein BACCELL_02984 [Bacteroides cellulosilyticus
DSM 14838]
Length = 295
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 17/300 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ S ++ S + I + IV NP+ PR+ F+
Sbjct: 1 MA--QKRNALGRGLDALL--------SMDEVQTEGSSSINEIELSKIVVNPNQPRHEFDE 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R + + Y+IIAGERRFRA+++A L+ +P IR D+++
Sbjct: 51 TALQELADSISEIGIIQPITLRKLSDDEYQIIAGERRFRASQLAGLTSIPAYIRTADDEN 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ L+ +YG TQ + VGK R+ +AN LR+LKLP+
Sbjct: 111 VMEMALIENIQREDLNSVEIALAYQHLLEQYGLTQERLSERVGKKRTTIANYLRLLKLPA 170
Query: 181 SVREMIRKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
++ I+ ++I +GHAR LV+ V + + + E + K
Sbjct: 171 PIQMAIQNKQIDMGHARALVTLADPKLQVKIFEEIIEHGYSVRKVEELVKSLSEGETVKS 230
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+KI + + L++++S + + KG+ I + E L+ I +L
Sbjct: 231 GGRKIAPKRAKLPEEFNMLKQQLSGFFSTKVQLTCSEKGKGKISIPFNNEEDLERIIGIL 290
>gi|149179599|ref|ZP_01858122.1| chromosome partitioning protein [Planctomyces maris DSM 8797]
gi|149185272|ref|ZP_01863589.1| chromosome partitioning protein [Erythrobacter sp. SD-21]
gi|148831383|gb|EDL49817.1| chromosome partitioning protein [Erythrobacter sp. SD-21]
gi|148841563|gb|EDL56003.1| chromosome partitioning protein [Planctomyces maris DSM 8797]
Length = 314
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 114/313 (36%), Positives = 174/313 (55%), Gaps = 16/313 (5%)
Query: 1 MSNNY-SKRRLGRGLAALIGEVNQSIDSPEKKTETIPE-----------SQDCISIHSIV 48
MS K++LGRGL AL+GE+ + + + E + I + I
Sbjct: 1 MSAAVDRKKKLGRGLGALMGEIQREEPLVRENSNDSNEVAAASAGASTSGLNDIPVADIS 60
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
P P PR +F+ E L+ L SI G+IQP+IV G Y+++AGERR+RAA+ A L
Sbjct: 61 PLPGQPRTHFDDEALDQLAASIAQRGVIQPIIVTPNGAGRYQLVAGERRWRAAQRARLHA 120
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
+P I+R++D + + +A++EN+QR+DLNPLEEA Y++L E G TQ +I ++V KSRSH
Sbjct: 121 IPAIVRDLDKREIMALALIENLQREDLNPLEEARAYQKLSDEEGMTQAEIAALVDKSRSH 180
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
VAN R+L LP V EM+ K ++++GHAR L+ +A+ V+ +SVR+ E+L +
Sbjct: 181 VANFQRLLALPEEVLEMLAKGKLTMGHARPLIGNEAAAEIARKAVNDNLSVREVEKLARG 240
Query: 229 QDNKKEKRKKIFEGSRE--KEKYLTDLEKKISSKVGLNISIKHRN--NKGQFCIKYETNE 284
+ KK K + E + + ++ + +GL + IK G I Y T +
Sbjct: 241 EKPKKAKAGGDAKPVSEAANDADIAAVQGHLEEFLGLPVRIKTEGAPGNGTVTIGYRTLD 300
Query: 285 QLKIICSLLGEND 297
QL +IC L D
Sbjct: 301 QLDLICQRLTGGD 313
>gi|262273120|ref|ZP_06050937.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Grimontia hollisae CIP 101886]
gi|262222876|gb|EEY74184.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Grimontia hollisae CIP 101886]
Length = 297
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 94/300 (31%), Positives = 182/300 (60%), Gaps = 12/300 (4%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTET----IPESQDCISIHSIVPNPHNPRNYF 58
N +KR LG+GL AL+ ++ + +ET + + ++ P + PR
Sbjct: 1 MNATKRGLGKGLDALLATSAKAQARVDLNSETQEAVNNSELQQLPLSALRPGVYQPRQDM 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ LE+L +SI++ G+IQPL+VR I + Y+IIAGERRFRAAK+A L+++P ++R +++
Sbjct: 61 AQDALEELAESIRAQGVIQPLVVRHIGDRQYEIIAGERRFRAAKIAGLTQIPCLVRQLND 120
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
K++ IA++EN+QR+DLN +EEA ++L ++ T + +GKSR+ ++N+LR+ L
Sbjct: 121 KAASAIALIENIQREDLNAMEEAEALDRLAHDFSLTHQQLAEALGKSRATISNLLRLNSL 180
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ V++++ ++ +GHAR L + + A V++K++VR TE LV++
Sbjct: 181 ETGVKKLLSGRQLEMGHARALLALEGEAQIEAALASVNRKLTVRQTEALVKKMLA----- 235
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + S+ L ++ +++ K+G ++++ + ++ +G+ I ++ +E+L I ++LGE
Sbjct: 236 PAVEKSSKFMSPELIAVQDRLADKLGTSVNLSQSKSGRGKLVINFDQDEKLMQILAILGE 295
>gi|261880097|ref|ZP_06006524.1| chromosome partitioning protein SpoOJ [Prevotella bergensis DSM
17361]
gi|270333254|gb|EFA44040.1| chromosome partitioning protein SpoOJ [Prevotella bergensis DSM
17361]
Length = 298
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 106/304 (34%), Positives = 164/304 (53%), Gaps = 17/304 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ LGRGL ALI S E + + I I I PN PR+ F
Sbjct: 1 MAVRKKYNALGRGLDALI--------STEAVRTQGSSTINEIPIDQIEPNADQPRSLFNE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SI+ GIIQP+ +R I ++IIAGERR+RA+++A L +P IR + +++
Sbjct: 53 EALQELAHSIREIGIIQPITLRQIAENKFQIIAGERRWRASQLAGLKSIPAYIRTIKDEN 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A+VEN+QR+DLN +E AL YE L+ + G TQ + VGKSR+ + N LR+LKLP+
Sbjct: 113 VMEMALVENIQREDLNSIEIALAYEHLLEQSGMTQEKVSERVGKSRTAITNYLRLLKLPA 172
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIV---SKKMSVRDTEELVQEQDNKKEKRK 237
V+ ++K+EI +GHAR L++ P ++ SVR EE+ Q N + K
Sbjct: 173 QVQMSLQKKEIDMGHARALLALDSPSLQLKLFRETLKNGWSVRKVEEMAQHLKNGDDMEK 232
Query: 238 KIFE--GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC---S 291
+ + + T L ++SS + + + + KG+ I + + E+L+ I
Sbjct: 233 GKKKIMAKTQLSEEFTMLRDQLSSFLDTKVQLSCNSKGKGKISIPFSSEEELERIMHTFD 292
Query: 292 LLGE 295
L E
Sbjct: 293 QLKE 296
>gi|291548777|emb|CBL25039.1| ParB-like partition proteins [Ruminococcus torques L2-14]
Length = 306
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 177/304 (58%), Gaps = 17/304 (5%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPE---------KKTETIPESQDCISIHSIVPNPHN 53
K LG+GL +LI N P K E + + I+ + PN
Sbjct: 1 MPVKKSGLGKGLDSLIPNKNVKSAKPSVKADEKKAAPKEEILEAGPIMVKINKVEPNREQ 60
Query: 54 PRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVII 113
PR F+ + L +L SIK G++QP++V+ Y+IIAGERR+RAAK+A L EVP+I+
Sbjct: 61 PRKDFDEDALMELADSIKQFGVLQPILVQK-KKDYYEIIAGERRWRAAKLAGLKEVPIIV 119
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
+ + +EI+++EN+QR++LNP+EEA+ Y++L+ E+ Q+++ V KSR+ V N +
Sbjct: 120 KEFTEQEIVEISLIENIQRENLNPIEEAMAYKRLLKEFNLKQDEVAERVSKSRTAVTNSM 179
Query: 174 RILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
R+LKL V++MI + IS GHAR L+ LA I +K+SVR+TE+LV+
Sbjct: 180 RLLKLNDRVQQMIIDDMISTGHARALLAIEDEEQQYMLANKIFDEKLSVRETEKLVKALK 239
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
N K++ KK+ ++ T+LE+++ S +G +S+ + N KG+ I+Y + + L+ I
Sbjct: 240 NPKKEEKKLEVENQFV---YTNLEEQMKSLIGTKVSVHAKANGKGKIEIEYYSPDDLERI 296
Query: 290 CSLL 293
LL
Sbjct: 297 YELL 300
>gi|163859295|ref|YP_001633593.1| chromosome partitioning protein ParB [Bordetella petrii DSM 12804]
gi|163263023|emb|CAP45326.1| probable chromosome partitioning protein ParB [Bordetella petrii]
Length = 303
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 106/297 (35%), Positives = 172/297 (57%), Gaps = 8/297 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL AL+G +ID+ K + + + + PR +
Sbjct: 1 MATKKPK-GLGRGLDALLGADGPAIDTIGKAPAKAEGPPATLPVVKMRAGKYQPRTRMDE 59
Query: 61 EGLEDLCQSIKSHGIIQPLIVR--AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L +SI++ GI+QP++VR + D G Y+IIAGERRFRAA++A L EVPV++R+V +
Sbjct: 60 GALNELAESIRTQGIMQPILVRALSDDPGHYEIIAGERRFRAAQLAGLKEVPVLVRDVAD 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+++ +A++EN+QR+DLNPLEEA G +L+ E+G T +G+SRS +N+LR++ L
Sbjct: 120 ENAAVMALIENIQREDLNPLEEAQGVRRLLDEFGLTHEQAAQAIGRSRSATSNLLRLMNL 179
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ V+ M+ +I +GHAR L V + + LA I++K++SVR+ E+LV KE
Sbjct: 180 AAPVQTMLLAGDIDMGHARALLAVDAAMQIQLANQIIAKRLSVREAEKLV--AKTAKESE 237
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+ S + + LE+ +S ++G +++K KGQ I + E L +
Sbjct: 238 AAPRKKSNGASRDVARLEEALSDQLGTRVALKVGAREKGQIVIDFHGWEHLNSLLER 294
>gi|16804827|ref|NP_466312.1| partition protein ParB homolg [Listeria monocytogenes EGD-e]
gi|47095597|ref|ZP_00233205.1| chromosome partition protein, ParB family [Listeria monocytogenes
str. 1/2a F6854]
gi|224498364|ref|ZP_03666713.1| partition protein ParB homolg [Listeria monocytogenes Finland 1988]
gi|224502797|ref|ZP_03671104.1| partition protein ParB homolg [Listeria monocytogenes FSL R2-561]
gi|254827358|ref|ZP_05232045.1| partition protein ParB [Listeria monocytogenes FSL N3-165]
gi|254830773|ref|ZP_05235428.1| partition protein ParB homolg [Listeria monocytogenes 10403S]
gi|254899752|ref|ZP_05259676.1| partition protein ParB homolg [Listeria monocytogenes J0161]
gi|254913045|ref|ZP_05263057.1| partition protein ParB homolg [Listeria monocytogenes J2818]
gi|254937426|ref|ZP_05269123.1| partition protein ParB [Listeria monocytogenes F6900]
gi|255025138|ref|ZP_05297124.1| partition protein ParB homolg [Listeria monocytogenes FSL J2-003]
gi|284800324|ref|YP_003412189.1| partition protein ParB homolg [Listeria monocytogenes 08-5578]
gi|284993509|ref|YP_003415277.1| partition protein ParB homolg [Listeria monocytogenes 08-5923]
gi|16412290|emb|CAD01003.1| Partition protein ParB homolg [Listeria monocytogenes EGD-e]
gi|47016027|gb|EAL06952.1| chromosome partition protein, ParB family [Listeria monocytogenes
str. 1/2a F6854]
gi|258599736|gb|EEW13061.1| partition protein ParB [Listeria monocytogenes FSL N3-165]
gi|258610028|gb|EEW22636.1| partition protein ParB [Listeria monocytogenes F6900]
gi|284055886|gb|ADB66827.1| partition protein ParB homolg [Listeria monocytogenes 08-5578]
gi|284058976|gb|ADB69915.1| partition protein ParB homolg [Listeria monocytogenes 08-5923]
gi|293591045|gb|EFF99379.1| partition protein ParB homolg [Listeria monocytogenes J2818]
Length = 283
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 94/286 (32%), Positives = 158/286 (55%), Gaps = 12/286 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL +T E+ I+I I PNP+ PR F+++ + +L
Sbjct: 3 KGLGKGINALF-----------NNVDTNEETVQNIAIKEIKPNPYQPRKIFDAKAINELR 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R D G Y+I+ GERR+RAAK A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNTDKG-YEIVVGERRYRAAKEAKLKEIPAVVRDLTEEEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ + TQ + VGKSR ++AN +R+L LP V+ M+R
Sbjct: 111 ENLQREDLSPLEEAESYQFLMKKLSLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ +L +N E +
Sbjct: 171 DGSLSAGHGRVLLGLKLKKNIIPTAKKAVAQGLTVRQLEDVVNNLNENVSRETIKPARVP 230
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 231 IFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 276
>gi|293399786|ref|ZP_06643932.1| stage 0 sporulation protein J [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306186|gb|EFE47429.1| stage 0 sporulation protein J [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 295
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 110/304 (36%), Positives = 179/304 (58%), Gaps = 15/304 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGE--VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ + RLG+GL+A+ GE N D + K+E +S+ + + + PNP+ PR +F
Sbjct: 1 MAKKENNARLGKGLSAIFGEDVSNVLEDIQQGKSEVHEDSKFEVDVKDVKPNPYQPRKHF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ + +++L SIK HG+ P++V Y++I GERR RA+K+A L +P I+ + D+
Sbjct: 61 DDDKIQELADSIKLHGVFTPILV-KKAVKGYELITGERRLRASKLAGLKRIPAILMDFDD 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +EIA++EN+QR+DLN +EEA GYE+LI + GY Q ++ +GKSR HVAN+LR+LKL
Sbjct: 120 QQMMEIALLENIQREDLNAIEEAQGYEKLIKKLGYKQEELAHRIGKSREHVANMLRLLKL 179
Query: 179 PSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P+SV++ + E+S+GH R +L +AQ + +SVR E LV+ +
Sbjct: 180 PASVQQHVVNNELSMGHVRALLSLKDPKLMEEVAQKAIQLHLSVRAVETLVKNMNE---- 235
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
K +E++ L +EK++ S+ G + I + Q IKY N+ L + ++G
Sbjct: 236 -PKPEPVKKERDVNLDQVEKRLQSRFGTKVKIDEK----QIVIKYHGNDDLNRVLEMIGG 290
Query: 296 NDFE 299
D E
Sbjct: 291 LDEE 294
>gi|262278904|ref|ZP_06056689.1| transcriptional regulator [Acinetobacter calcoaceticus RUH2202]
gi|262259255|gb|EEY77988.1| transcriptional regulator [Acinetobacter calcoaceticus RUH2202]
Length = 295
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 92/299 (30%), Positives = 177/299 (59%), Gaps = 15/299 (5%)
Query: 1 MSNNYSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR L GRGL AL+G + + E + + ++ + + PR +
Sbjct: 1 MS--IKKRGLAKGRGLDALLGSIQKEKLQLEAQA-LDHGQLKQVDVNLLKRGEYQPRRFI 57
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI+ HG++QP+++R +D+ ++IIAGERR+RAA++A L+E+P I+R++
Sbjct: 58 HEHDLQELASSIEKHGVMQPIVIRPVDDETHPFEIIAGERRWRAAQIAGLTEIPAIVRDL 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+++ ++ +A++EN+QR+DLNP+++A+ ++ E+G + +I VGK+R+ V+N+LR+L
Sbjct: 118 NDQVAIALALIENIQRQDLNPIDQAIALQRFHDEFGLSHQEIADTVGKARTTVSNLLRLL 177
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKE 234
L +++ +++ ++ +GHAR +++ +A++++ K +SVR TE+LV+
Sbjct: 178 SLADDIKDFMQQGQLDMGHARAILTLKGKDQLEVAKIVIEKGLSVRQTEQLVR-----DR 232
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
K + + L +K+S + G N+ I H KG+ I Y T ++L I ++
Sbjct: 233 SEPKQEKEKTTVAPDIEKLTQKLSERFGANVKIDHNQKGKGKLVIHYHTLDELDGILNI 291
>gi|262197765|ref|YP_003268974.1| parB-like partition protein [Haliangium ochraceum DSM 14365]
gi|262081112|gb|ACY17081.1| parB-like partition protein [Haliangium ochraceum DSM 14365]
Length = 306
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 114/291 (39%), Positives = 172/291 (59%), Gaps = 11/291 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD------CISIHSIVPNPHNP 54
MSN +R LGRGL+AL+ + P + + + I I PNP P
Sbjct: 1 MSNPPKRRGLGRGLSALLPNTPDAAAKPGAEETSRGAASAGKRAYFQAQIEEIYPNPDQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R FE LE+L QSI++ G+IQPLIVRA G Y ++AGERR+RA++ A L +VPV++R
Sbjct: 61 RKRFEEAALEELAQSIRALGVIQPLIVRARPEGGYYLVAGERRWRASQRAGLHQVPVVVR 120
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+ + + E A+VEN+QR DLN +EEA Y++L+ ++GYTQ + VGK RS VAN LR
Sbjct: 121 ELAPRDAFERALVENLQRADLNAIEEAEAYQRLVEDFGYTQEQVAERVGKERSTVANSLR 180
Query: 175 ILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
+L+LP+ VR M+ +S+GHAR L + D A+ +VS+K+SVR TE+ +++Q
Sbjct: 181 LLRLPTGVRGMVEGGALSMGHARALLALEPEDIEPTARRVVSRKLSVRATEDWIRKQSQP 240
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK---HRNNKGQFCIKY 280
+R + + +K + DLE ++S +G +S+ + G I+Y
Sbjct: 241 PAERAQAQAQAPKKSASVRDLELRLSKSLGSQVSVDEDGNDKKSGTIQIRY 291
>gi|114568071|ref|YP_755225.1| transcriptional regulator [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114339006|gb|ABI69854.1| chromosome segregation DNA-binding protein / transcriptional
regulator [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 280
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 94/290 (32%), Positives = 161/290 (55%), Gaps = 14/290 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
R LGRGL AL+ ++ E I + IV PR F+ + L+
Sbjct: 3 KKGRGLGRGLEALLSNELAFDETQE---------LTQIKVDEIVLRKDQPRKNFDEKSLQ 53
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ HG++QPLIVR ++++AGERR+RAA++A L +VP +IR +D+ + E+
Sbjct: 54 ELADSIQEHGLLQPLIVRHR-QDGFELVAGERRWRAAQIAGLIQVPALIREMDDVQAAEV 112
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
++VEN+QR DL+ +EEA+ Y+ ++ YGYTQ + +GKSR H+AN++R+L LP V
Sbjct: 113 SLVENIQRDDLSAVEEAMAYKYMMDNYGYTQEVLAEKLGKSRPHIANMVRMLALPEQVLT 172
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
M+ ++EI+ GHAR ++S A ++ + V+E + K + K + +
Sbjct: 173 MLERQEITAGHARAILSLPT----AAEQIAAAKEIVAGRLSVRETEKKAKSIIKRKQVEK 228
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+++ + +LE+++ S + + G I + + E L+ I L+G
Sbjct: 229 KRDPVIMELEERMESYFSSRTKVMQKGRGGTIEISFYSLEDLERIVELIG 278
>gi|153956498|ref|YP_001397263.1| hypothetical protein CKL_3916 [Clostridium kluyveri DSM 555]
gi|219856801|ref|YP_002473923.1| hypothetical protein CKR_3458 [Clostridium kluyveri NBRC 12016]
gi|146349356|gb|EDK35892.1| ParB [Clostridium kluyveri DSM 555]
gi|219570525|dbj|BAH08509.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 286
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 99/289 (34%), Positives = 162/289 (56%), Gaps = 6/289 (2%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E I E + I+I IV N PR F+ + + +
Sbjct: 3 KKYGLGKGLRALIPENALDI------GEENQKDIKYINIDFIVANKSQPRKKFDKDKILE 56
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSIK +GIIQPL+V I++ Y II GERR+RAAK+A++ E+PVII N+ + LE++
Sbjct: 57 LSQSIKEYGIIQPLVVNEIEDNTYSIIVGERRWRAAKLANIKEIPVIIMNLSDNEILEVS 116
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEAL Y++L++E TQ ++ + +GKSR+ + N +R+L L V+
Sbjct: 117 LIENIQRQDLNPIEEALAYKKLVTELNLTQEELSNKIGKSRTKITNCMRLLNLDDRVQNY 176
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ I+ GH R L+ ++ + ++ + N +K ++E
Sbjct: 177 LIDGVITEGHGRALLGLESNDLQYELAQTIINKNLTVRDVEKLIKNVNSHKKPQQNETKE 236
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ Y D++ K+ + G + + + NKG+ I+Y + E L+ I +L
Sbjct: 237 QNVYYLDIKDKLENLFGTKVLLMDKKNKGKIEIEYYSQEDLQRILDILK 285
>gi|229542325|ref|ZP_04431385.1| parB-like partition protein [Bacillus coagulans 36D1]
gi|229326745|gb|EEN92420.1| parB-like partition protein [Bacillus coagulans 36D1]
Length = 286
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 106/289 (36%), Positives = 175/289 (60%), Gaps = 16/289 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL ++ + ++ ++I + PNP+ PR FE E L +L
Sbjct: 3 KGLGKGINALFANMDVDKE----------DAVQEVNIKELRPNPYQPRKNFEPEALNELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI HGI+QPLIVR Y+II GERR+RAAK A L+ VPV++R+++++ +E A++
Sbjct: 53 ESILQHGILQPLIVRK-SIKGYEIIVGERRYRAAKEAKLTTVPVVVRDLNDRQMMEFAVL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL P+EEA Y+ L+ + TQ ++ +GKSR ++AN LRIL LP S++E +
Sbjct: 112 ENLQREDLTPIEEANAYQFLLEKLNVTQEELAKRLGKSRPYIANHLRILSLPVSIQEAMS 171
Query: 188 KEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
K ++S+GH RTL+ +A+ +++ +SVR E+LVQ+ + + K + +
Sbjct: 172 KGKLSMGHGRTLLGLEKKEKMEEIAEKAIAEGLSVRQLEKLVQQLNRNVSRETK--KDKQ 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
EK+ ++ + E + K G + IK KG+ I++ +NE L+ I LL
Sbjct: 230 EKDIFIQEHETVLREKFGTTVHIKRTKKKGKIEIEFMSNEDLERILQLL 278
>gi|15896960|ref|NP_350309.1| stage 0 sporulation protein J [Clostridium acetobutylicum ATCC 824]
gi|15026836|gb|AAK81649.1|AE007868_5 Stage 0 sporulation J, ParB family of DNA-binding proteins
[Clostridium acetobutylicum ATCC 824]
Length = 283
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 106/289 (36%), Positives = 157/289 (54%), Gaps = 9/289 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRGL ALI + + E S IS++ I PN PR F+SE +
Sbjct: 3 KKGGLGRGLNALIVDTDVK--------EEENSSSQKISLNLIKPNEGQPRKNFDSEKIVQ 54
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK HGI+QPL+++ + AGERRFRAAK L EVP +I + K LEI+
Sbjct: 55 LAESIKEHGIVQPLVLKKKGKQYIIV-AGERRFRAAKSLGLKEVPAVIIDATEKEILEIS 113
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEAL Y++L+ ++ TQ + +GKSR +AN +R+L L V+E
Sbjct: 114 LIENIQREDLNPIEEALAYKRLLEDFNLTQEQLSQRIGKSRVAIANCIRLLNLDERVQEY 173
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ IS GH R L+S +D ++ + KE +K E S+E
Sbjct: 174 LIDGVISEGHGRVLLSIADKELQYKISQKIIDEDLSVRATEKLLKTYKETTEKNDEESKE 233
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ +Y+ D+ K+ G + +K NKG+ I+Y +NE L+ I +L
Sbjct: 234 ENQYIVDIRNKLEGYFGTKVLLKTNKNKGKIEIEYYSNEDLQRIIDILK 282
>gi|297618517|ref|YP_003703676.1| parB-like partition protein [Syntrophothermus lipocalidus DSM
12680]
gi|297146354|gb|ADI03111.1| parB-like partition protein [Syntrophothermus lipocalidus DSM
12680]
Length = 275
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 102/290 (35%), Positives = 160/290 (55%), Gaps = 16/290 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+R LGRGL ALIG + + I + P PR FE E +
Sbjct: 1 MGRRGLGRGLDALIGTEESDFERDS----------LELDIGLVQPRGRQPRKKFEDESMA 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ HG++QP++VR ++ G Y+++AGERR RAA M L +PV+IR + + E+
Sbjct: 51 ELAASIREHGVLQPIVVRPVEAGKYEVVAGERRLRAAGMVGLERIPVVIREIGEHEASEL 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DL+P+EEAL + ++I +YGYTQ + +GKSRS+VAN LRIL L S VR+
Sbjct: 111 ALIENLQREDLSPVEEALAFREMIEQYGYTQEKLAERIGKSRSYVANALRILNLCSEVRD 170
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
M+ + E+S GHAR ++ + I + + + V+ K+ R +
Sbjct: 171 MVERGELSAGHARAILGVAKDEKEQVKIARRIVRFGLSVRDVEGVKKKETGRHEP----- 225
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+E L DLE+++ ++G S+K G+ I + +E L I +L
Sbjct: 226 -RESELVDLEERLQERLGTKASVKRNRRGGRIEIFFYNDEDLMRIVDILN 274
>gi|154483912|ref|ZP_02026360.1| hypothetical protein EUBVEN_01618 [Eubacterium ventriosum ATCC
27560]
gi|149735403|gb|EDM51289.1| hypothetical protein EUBVEN_01618 [Eubacterium ventriosum ATCC
27560]
Length = 311
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 159/305 (52%), Gaps = 16/305 (5%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETI--------------PESQDCISIHSIV 48
K+ LGRGL LI E N + S +K ++ + + I
Sbjct: 1 MAAKKKVLGRGLDLLIPEGNNTKQSKTEKESKPIIKEVVKEVVKEVKVPAETFLKLSDIE 60
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
PN PR F+ E LE+L SIK +G+IQP++V+ D Y+IIAGERR+RAAK+A L E
Sbjct: 61 PNREQPRKNFDKEALEELADSIKQYGLIQPIVVQKKD-DYYEIIAGERRWRAAKIAKLKE 119
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
VPVII+ + +EIA++EN+QR+DLNP+EEAL Y+ LI EY Q ++ V KSR+
Sbjct: 120 VPVIIKEYSPQEVMEIALIENIQRRDLNPIEEALAYKSLIDEYNLKQEEVADRVSKSRTA 179
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
V N +R+LKL V+ M+ EE+S+GHAR L+S + + E +
Sbjct: 180 VTNSMRLLKLAEQVQTMLINEELSMGHARALLSIEKEEVQVETAKAIVERKLSVRETEKL 239
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLK 287
++ + L K+ +G ++I H+ KG+ I+Y + ++L+
Sbjct: 240 VKAILNPKQAKLPIPSTNDVVYEKLSDKLKEIMGTKVNINHKKGGKGKIEIEYYSQDELE 299
Query: 288 IICSL 292
+ L
Sbjct: 300 RLLEL 304
>gi|158321885|ref|YP_001514392.1| parB-like partition protein [Alkaliphilus oremlandii OhILAs]
gi|158142084|gb|ABW20396.1| parB-like partition protein [Alkaliphilus oremlandii OhILAs]
Length = 291
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 115/282 (40%), Positives = 172/282 (60%), Gaps = 8/282 (2%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
ALI ++ I E + + E + ISIH I PNP+ PR F E +++L SIK HG
Sbjct: 14 EALIPDM---ISFNEIEQDVTTEKIEQISIHKIYPNPNQPRKSFNEESIQELANSIKIHG 70
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
IIQPLIV G Y IIAGERR RA+++ L EVP I++N K LE++++EN+QR+D
Sbjct: 71 IIQPLIVSKTAKG-YMIIAGERRLRASRLIDLKEVPCIVKNYSEKQLLEVSLIENLQRQD 129
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
LN +EEAL Y+ LI +Y TQ ++ +GKSRS++ANILR+L+L V + I + ++S G
Sbjct: 130 LNVIEEALAYQYLIQQYKVTQEELSEALGKSRSYLANILRLLRLDQRVIDFIIEGKLSGG 189
Query: 195 HARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
H R ++S LA+ I+S+ +SVR EELV+ +N ++ K + + K+ ++
Sbjct: 190 HGRAILSIEPLDRQYLLAEKIISEGLSVRQVEELVKNLNNAIKENHKKTK-NENKDIHVA 248
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+E+ + S G ++I N KG+ I+Y +E L I LL
Sbjct: 249 AIEESLRSIFGTKVNIIKGNKKGKIEIEYYNDEDLDRIIGLL 290
>gi|114326672|ref|YP_743829.1| chromosome partitioning protein parB [Granulibacter bethesdensis
CGDNIH1]
gi|114314846|gb|ABI60906.1| chromosome partitioning protein parB [Granulibacter bethesdensis
CGDNIH1]
Length = 288
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 114/295 (38%), Positives = 184/295 (62%), Gaps = 11/295 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + + RLGRGLAAL+G+ D P + TE +++ + P+P PR E
Sbjct: 1 MTKSP-QTRLGRGLAALLGD-----DLPTQDTERRHPDIAMLAVELLAPSPFQPRGTIEP 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ L +L +S+++ GI+QPL+ R + G Y+IIAGERR+RAA+ A L EVPV++R + +
Sbjct: 55 DALAELTESVRARGILQPLLARPDPDLAGRYQIIAGERRWRAAQAAGLHEVPVLVRALSD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++ A+VEN+QR+DLN +EEA GY +L E+G TQ +G VGKSRSH+AN LR+L L
Sbjct: 115 SDAMAAALVENLQRQDLNAVEEAEGYRRLSEEFGLTQEKLGDAVGKSRSHIANTLRLLNL 174
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
PS V ++K +S GHAR L+S +DP + +++K ++VR TE+LV ++
Sbjct: 175 PSPVLHEVKKGALSAGHARALLSHADPATAMLTVLAKGLNVRQTEQLVARKNA---PPVT 231
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
E + ++ + LE+ +S+ +GL +++ + G I+Y++ +QL + +LL
Sbjct: 232 AQERAARRDPEIAVLERDLSNHLGLKVTVTYDGQSGDIRIRYKSLDQLDGLITLL 286
>gi|16801981|ref|NP_472249.1| partition protein ParB homolg [Listeria innocua Clip11262]
gi|16415463|emb|CAC98147.1| Partition protein ParB homolg [Listeria innocua Clip11262]
Length = 283
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 95/286 (33%), Positives = 159/286 (55%), Gaps = 12/286 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL +T E+ I+I I PNP+ PR F+++ + +L
Sbjct: 3 KGLGKGINALF-----------NNVDTNEETVQNIAIKEIKPNPYQPRKIFDTKAINELR 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R + G Y+I+ GERRFRAAK A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNAEKG-YEIVVGERRFRAAKEAKLKEIPAVVRDLTEEEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ + G TQ + VGKSR ++AN +R+L LP V+ M+R
Sbjct: 111 ENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ +L +N E +
Sbjct: 171 DGSLSAGHGRVLLGLKLKKNIIPTAKKAATQGLTVRQLEDVVNNLNENVSRETIKPARVP 230
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 231 IFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 276
>gi|304318127|ref|YP_003853272.1| parB-like protein partition protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779629|gb|ADL70188.1| parB-like protein partition protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 279
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 112/296 (37%), Positives = 174/296 (58%), Gaps = 23/296 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+N KR LGRGL ALI +++ E + + I I I PN PR +F+
Sbjct: 1 MNN---KRGLGRGLQALIPDID----------EENTKGVENIKISDIEPNQFQPRKHFDD 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK HGIIQP+IVR I+ G Y+I+AGERR+RAAK+A L E+P I+++ D++
Sbjct: 48 ESLKELSDSIKEHGIIQPIIVRKINFG-YQIVAGERRWRAAKLAGLKEIPAIVKDFDDQK 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DLNP++EA Y+ L+ ++ TQ +I VGKSRS +AN +R+L L
Sbjct: 107 VMEIALIENLQREDLNPIDEAKAYKSLMEQFNLTQEEISKRVGKSRSAIANSIRLLNLDE 166
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M+ + +I+ GHA+ + +A IV K ++VR+TE L++E +
Sbjct: 167 KVQNMLMEGKITTGHAKVILAVQDADKQNIIANKIVDKNLNVRETENLIKEVAS------ 220
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + + Y+ ++E G + I NKG+ I+Y E L + L+
Sbjct: 221 PKRKRRQVNDIYIKEIEDNFCRFFGTKVKIIPGKNKGKIMIEYYGEEDLSRLTDLI 276
>gi|228472753|ref|ZP_04057511.1| spoOJ protein [Capnocytophaga gingivalis ATCC 33624]
gi|228275804|gb|EEK14570.1| spoOJ protein [Capnocytophaga gingivalis ATCC 33624]
Length = 304
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 106/301 (35%), Positives = 169/301 (56%), Gaps = 9/301 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + +RLGRGL AL+ + + E + + + + I NP+ PR F
Sbjct: 1 MAKSNKTQRLGRGLGALLP-SEDIQSATDAHAEKLIGNILELPLDQITENPYQPRTVFSE 59
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+ G+IQP+ VR I Y++I+GERR+RA+K+A L+ +P IR +++
Sbjct: 60 EALEELASSIRELGVIQPITVRKIATDKYELISGERRWRASKIAGLTAIPAFIRIANDEE 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
SL +A+VEN+QR+DL+P+E AL Y ++I E TQ + VGK RS + N LR+LKL
Sbjct: 120 SLMMALVENIQRQDLDPIEVALSYNRMIEELSLTQEQMSERVGKKRSTITNYLRLLKLDP 179
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ IR IS+GH R L++ D I+++ +SVRDTE+ VQ+ N ++
Sbjct: 180 IIQTGIRDGFISMGHGRALINIEDKEEQLELYNRIIAQDLSVRDTEQAVQQLKNPQKVAV 239
Query: 238 KIFEGSREKEKYLTDL----EKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSL 292
+ S+E L L + + G ++S+K KG+ I ++T E+ + I +
Sbjct: 240 ITPKQSKETTASLPPLVAAKVDGLRQRFGKHLSVKMDKTGKGKIEIPFQTEEEFERIQKI 299
Query: 293 L 293
L
Sbjct: 300 L 300
>gi|319954289|ref|YP_004165556.1| parb-like partition protein [Cellulophaga algicola DSM 14237]
gi|319422949|gb|ADV50058.1| parB-like partition protein [Cellulophaga algicola DSM 14237]
Length = 301
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 100/298 (33%), Positives = 169/298 (56%), Gaps = 5/298 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP-EKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I + +K + + + + + +I NP PR+ F
Sbjct: 1 MAKATQKQVLGRGLSALLKDPENDIKTASDKNADKVVGNIVELDLVAIEVNPFQPRSNFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SI+ G+IQP+ VR ++ Y++++GERRFRA+K+ L +P IR +++
Sbjct: 61 DEALHELASSIRELGVIQPITVRKLEFNKYQLVSGERRFRASKLIGLETIPAYIRIANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E AL Y++LI E TQ + VGK RS + N LR+L+L
Sbjct: 121 ESLEMALVENIQRQDLDPIEIALSYQRLIDEIQLTQEKMSERVGKKRSTITNYLRLLRLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ IR +S+GH R LV+ + I+S+ +SVRDTE+ V+E N +
Sbjct: 181 PIIQTGIRDGFLSMGHGRALVNIDKKDDQLSLYEQIISENLSVRDTEKAVKEYQNPSTSQ 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
K+ + + ++ + +S + + + K KG+ I + + E + I L+
Sbjct: 241 KETTPKTAKTPGFIENSLNDFNSYLSVKVEAKATDKGKGKLTIPFNSKEDFERIKKLI 298
>gi|306834792|ref|ZP_07467856.1| ParB family protein [Corynebacterium accolens ATCC 49726]
gi|304569320|gb|EFM44821.1| ParB family protein [Corynebacterium accolens ATCC 49726]
Length = 346
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 97/343 (28%), Positives = 168/343 (48%), Gaps = 51/343 (14%)
Query: 1 MSNNYSKRRLGRGLAALI------------------------------------------ 18
M+ + LG+GLAALI
Sbjct: 1 MAE-QKQGGLGKGLAALIPSGPDAPTRKPRLGDSAADIILGNSTSNSERKARGEKRVKGA 59
Query: 19 -----GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
G + S + I + IS+ IVPNP PR F+ + L +L SI+
Sbjct: 60 PTIQQGSGSNSSKKRQATPAAIGATYREISVGEIVPNPKQPRTVFDEDELSELVHSIREF 119
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++QP++VR + G +++I GERR+RA+ A L+ +P I+R+ + + L A++EN+ R
Sbjct: 120 GLLQPVVVRPSEEGGFELIMGERRWRASSKAGLATIPAIVRDTKDDNLLRDALLENIHRV 179
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
LNPLEEA Y+QL+ E+G TQN++ +G+SR V N+LR+L+LP V++ + +S
Sbjct: 180 QLNPLEEAHAYQQLLEEFGVTQNELADRIGRSRPQVTNMLRLLRLPVDVQKRVAAGTLSA 239
Query: 194 GHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
GHAR ++ +A ++S+ +SVR TEE V + + + + ++
Sbjct: 240 GHARAILGLDDKEAMDYIADRVISEGLSVRATEEAVTLYKRDGKPAENKKKSQVPQPQFF 299
Query: 251 TDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
TD +++S + +++ KG+ +++ E + I +L+
Sbjct: 300 TDSAERLSDRFDTKVTVTMGKRKGKMVVEFGDQEDFERIMALM 342
>gi|170761288|ref|YP_001788980.1| stage 0 sporulation protein J [Clostridium botulinum A3 str. Loch
Maree]
gi|169408277|gb|ACA56688.1| stage 0 sporulation protein J [Clostridium botulinum A3 str. Loch
Maree]
Length = 282
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 104/292 (35%), Positives = 170/292 (58%), Gaps = 16/292 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E +Q +S + ISI+ I PN PR F+ E +
Sbjct: 3 KKSALGKGLGALIPEKSQE----------NKDSINTISINLIKPNNEQPRKSFDEEKIGY 52
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSIK HGIIQPL+++ N + AGERR+RAAK+ + ++P ++ ++D++S LEI+
Sbjct: 53 LAQSIKEHGIIQPLVLKKEGNLYTIV-AGERRWRAAKLVGIKKIPAVVMDLDDRSVLEIS 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLN +EEA Y+ LI E+ TQ+ + +GKSR+ +AN +R+L L V++
Sbjct: 112 LIENIQRQDLNCIEEAQAYKNLIQEFKITQDVLSIRIGKSRAAIANCMRLLALDKRVQQY 171
Query: 186 IRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ I+ GH R L++ + Q I+ + +SVR+TE +++ KEK+ K
Sbjct: 172 LIDGVITEGHGRALLALKENELQYKLSQTIIDENLSVRETERIIRNIY--KEKKNKNNAK 229
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E Y D++ K+ S +++++ NKG+ I+Y + + L+ I +L
Sbjct: 230 DNEISPYYKDIKSKLESLFDTKVNLQNNKNKGKIEIEYYSEDDLQRILDILK 281
>gi|323703267|ref|ZP_08114918.1| parB-like partition protein [Desulfotomaculum nigrificans DSM 574]
gi|323531732|gb|EGB21620.1| parB-like partition protein [Desulfotomaculum nigrificans DSM 574]
Length = 293
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 100/296 (33%), Positives = 166/296 (56%), Gaps = 14/296 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LG+GL AL+ + + I + I PNP PR +
Sbjct: 1 MN---KKRGLGKGLQALMPISSNEPPAQ--------GMLKEIRVSDIRPNPKQPRLRMDQ 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L +SI+ +G++QP++VR G Y++IAGERR+RA + L +P ++R
Sbjct: 50 EKLMELVESIREYGVVQPVVVRVRPGGGYELIAGERRWRACQQLGLEYIPAVVREFGELQ 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
S IA++EN+QR++LNPLEEA Y++L+ E+ TQ+++ VGKSR + N+LR+L LP+
Sbjct: 110 SAAIALIENLQRENLNPLEEATAYKRLMDEFQLTQDEVSQRVGKSRPQITNMLRLLSLPN 169
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ + E+S+GHAR L+ S + LA +I+ K +SVR E++V+ + K E +
Sbjct: 170 EIKVWLNTGELSVGHARALLGLDSRQQQIDLANLIIKKNLSVRQVEDMVRTINKKNETGE 229
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + K+ + ++E ++ S +G + IK G+ I + + L I LL
Sbjct: 230 PPKKKDKPKKPEIIEIEDQLRSVLGTKVQIKTNKRGGKIEIDFYDDVDLDRILELL 285
>gi|282880925|ref|ZP_06289616.1| ParB-like protein [Prevotella timonensis CRIS 5C-B1]
gi|281305148|gb|EFA97217.1| ParB-like protein [Prevotella timonensis CRIS 5C-B1]
Length = 302
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 104/297 (35%), Positives = 170/297 (57%), Gaps = 14/297 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S + LGRGL ALI S + + + I I I NP+ PR F+ E
Sbjct: 8 SQSGKGSALGRGLDALI--------STDDIQTQGSSTINEIPIEQIEANPNQPRREFDQE 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LE+L SI+ GIIQP+ +R + Y+I+AGERR+RA+++ L +P IR +D+++
Sbjct: 60 ALEELASSIREIGIIQPITLRQVATDKYQIVAGERRWRASQIVGLEAIPAYIRTIDDETV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE+L+ + G TQ + VGKSR+ + N LR+LKLP+
Sbjct: 120 MEMALVENIQREDLNAIEIALAYEKLMEKSGMTQEKVSKHVGKSRTAITNYLRLLKLPAQ 179
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++K+EI +GHAR L++ P + +V SVR EEL Q+ N ++ +
Sbjct: 180 VQMALQKKEIDMGHARALLAIDSPSQQIKLFKEVVKNAYSVRKVEELAQQLKNGEDLQTA 239
Query: 239 IFEGSREKE--KYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+ + +K + L+K++SS + + + N KG+ I + +L+ + ++
Sbjct: 240 KKKMNTKKSMPEEYDMLKKRLSSFLDTKVQLTCSANGKGKISIPFANAAELERLMNI 296
>gi|227502234|ref|ZP_03932283.1| stage 0 DNA-binding protein [Corynebacterium accolens ATCC 49725]
gi|227077058|gb|EEI15021.1| stage 0 DNA-binding protein [Corynebacterium accolens ATCC 49725]
Length = 346
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 97/343 (28%), Positives = 169/343 (49%), Gaps = 51/343 (14%)
Query: 1 MSNNYSKRRLGRGLAALI------------------------------------------ 18
M+ + LG+GLAALI
Sbjct: 1 MAE-QKQGGLGKGLAALIPSGPDAPTRKPRLGDSAADIILGNSTGNSERKARGEKRVKGA 59
Query: 19 -----GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
G ++S + I + IS+ IVPNP PR F+ + L +L SI+
Sbjct: 60 PTIQQGSGSKSSKKRQATPAAIGATYREISVGEIVPNPKQPRTVFDEDELSELVHSIREF 119
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++QP++VR + G +++I GERR+RA+ A L+ +P I+R+ + + L A++EN+ R
Sbjct: 120 GLLQPVVVRPSEEGGFELIMGERRWRASSKAGLATIPAIVRDTKDDNLLRDALLENIHRV 179
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
LNPLEEA Y+QL+ E+G TQN++ +G+SR V N+LR+L+LP V++ + +S
Sbjct: 180 QLNPLEEAHAYQQLLEEFGVTQNELADRIGRSRPQVTNMLRLLRLPVDVQKRVAAGTLSA 239
Query: 194 GHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
GHAR ++ +A ++S+ +SVR TEE V + + + + ++
Sbjct: 240 GHARAILGLDDKEAMDYIADRVISEGLSVRATEEAVTLYKRDGKPAENKKKSQVPQPQFF 299
Query: 251 TDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
TD +++S + +++ KG+ +++ E + I +L+
Sbjct: 300 TDSAERLSDRFDTKVTVTMGKRKGKMVVEFGDQEDFERIMALM 342
>gi|82703880|ref|YP_413446.1| parB-like partition proteins [Nitrosospira multiformis ATCC 25196]
gi|82411945|gb|ABB76054.1| chromosome segregation DNA-binding protein [Nitrosospira
multiformis ATCC 25196]
Length = 285
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 109/292 (37%), Positives = 174/292 (59%), Gaps = 17/292 (5%)
Query: 4 NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
R LGRGL AL+ + S E + I + + P + PR + E L
Sbjct: 7 KMKIRGLGRGLDALLAGSGGNAVSEE--------TLQSIKVSLLQPGKYQPRTRMDKESL 58
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
+L SIK+ G++QP++VR + G Y+IIAGERR+RAA++A L EVP +IR V ++++L
Sbjct: 59 GELADSIKAQGVMQPVLVRPVGGGKYEIIAGERRWRAAQLAGLGEVPALIREVPDEAALA 118
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
++++EN+QR++LNPLEEALG ++LI ++G T +G SRS V+N+LR+L L + V+
Sbjct: 119 MSLIENIQRENLNPLEEALGIQRLIRDFGMTHQAASEALGSSRSAVSNLLRLLNLAAPVQ 178
Query: 184 EMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
E++ + +I +GHAR L+S + A ++V K +SVR+TE+LV + + +
Sbjct: 179 ELLMQGKIDMGHARALLSLAAAKQIETANLVVHKGLSVRETEKLVYQI------EHPVVK 232
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
++++ L L++ S+K+G + I + KG I YET EQL I S
Sbjct: 233 HHPQRDRDLLRLQENFSAKIGAQVVITPGKKGKGTILIHYETLEQLDGILSR 284
>gi|330470825|ref|YP_004408568.1| parB-like partition protein [Verrucosispora maris AB-18-032]
gi|328813796|gb|AEB47968.1| parB-like partition protein [Verrucosispora maris AB-18-032]
Length = 321
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 91/280 (32%), Positives = 153/280 (54%), Gaps = 4/280 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+I + I + SIVPNP PR F+ E LE+L SI+ G +QP++
Sbjct: 36 PAPAITPDPILSPVPGARFAEIPVDSIVPNPKQPRQVFDEEALEELKTSIREVGFLQPIV 95
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR +D+ ++++ GERR+RAA+ +P I+R+ + + L A++EN+ R +LNPLEE
Sbjct: 96 VRQLDDEKFELVMGERRWRAAQAVERETIPAIVRDTRDDAMLRDALLENIHRANLNPLEE 155
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+QL+ E+G T ++ +G+SR ++N +R+L LP+ V+ + +S GHAR L+
Sbjct: 156 AAAYQQLLEEFGATHEELARRIGRSRPQISNTIRLLNLPAQVQRRVAAGVLSAGHARALL 215
Query: 201 ---STSDPLSLAQVIVSKKMSVRDTEELVQE-QDNKKEKRKKIFEGSREKEKYLTDLEKK 256
LA IV++ +SVR TEE+V K++ ++ L DL +
Sbjct: 216 SLEDPQAQEQLALRIVAEGLSVRATEEIVALSLSEGAGKKETAKRRAKPHAPGLNDLADR 275
Query: 257 ISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+S + + + +KG+ I++ T + L+ I L+G N
Sbjct: 276 LSDRFDTRVKVDIGRSKGKITIEFATVDDLERIVDLIGVN 315
>gi|227894001|ref|ZP_04011806.1| stage 0 sporulation protein J [Lactobacillus ultunensis DSM 16047]
gi|227864202|gb|EEJ71623.1| stage 0 sporulation protein J [Lactobacillus ultunensis DSM 16047]
Length = 294
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 107/296 (36%), Positives = 166/296 (56%), Gaps = 19/296 (6%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
K LGRG+ AL + Q ++ E +++ I PNP+ PR F+ +
Sbjct: 9 EPKKKGGLGRGIEALFEDEPQIEETEE---------VQELNLGDIRPNPYQPRKRFDDKS 59
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L++L SIK +G+ QP+IVR Y+IIAGERR+RA+K+A +P I+R D +
Sbjct: 60 LKELSDSIKENGVFQPIIVRK-SVNGYEIIAGERRYRASKLAKKKTIPAIVRKFDESQMM 118
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR+DL PLEEA YE L G TQ ++ +GKSR ++AN LR+L L +
Sbjct: 119 EVAVLENLQREDLTPLEEAQAYEMLQKNLGLTQEEVSKRMGKSRPYIANYLRLLTLTNKT 178
Query: 183 REMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ M++ E+S+G ART L +LA+ +V + M VR E LV E + KK
Sbjct: 179 KRMLQHGELSMGQARTLLGLKDKDKIDALAKKVVKEGMPVRKVEALVSEMNA-----KKP 233
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
+ S +K ++ E ++S+K G +++I + KG I + + ++L I LLG
Sbjct: 234 RKKSVKKSAFIRASENQLSNKFGASVNISETKKGKGHLSIDFASADELNRILDLLG 289
>gi|153811958|ref|ZP_01964626.1| hypothetical protein RUMOBE_02351 [Ruminococcus obeum ATCC 29174]
gi|149831857|gb|EDM86943.1| hypothetical protein RUMOBE_02351 [Ruminococcus obeum ATCC 29174]
Length = 313
Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 110/307 (35%), Positives = 173/307 (56%), Gaps = 23/307 (7%)
Query: 6 SKRRLGRGLAALIGEV----------------NQSIDSPEKKTETIPESQDCISIHSIVP 49
K LGRGL AL E ++D+ + + + + I I P
Sbjct: 5 KKSGLGRGLDALFPEKTVQSKPKTVKTVKEEKKVAVDTKKSSQQETSNGERMMKISMIEP 64
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N PR F+ + L++L +SIK +GI+QPL+V + Y+I+AGERR+RAAKMA L EV
Sbjct: 65 NREQPRKKFDEDALQELSESIKQYGILQPLLV-SDKKDYYEIVAGERRWRAAKMAGLKEV 123
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
PV+++ + +EI+++EN+QR+DLNP+EEA+ Y++LI E+ Q++I V KSR+ V
Sbjct: 124 PVVVKEFSTQEIVEISLIENIQREDLNPVEEAMAYKRLIDEFHLKQDEIAERVSKSRTAV 183
Query: 170 ANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELV 226
N +R+LKL S V++M+ E IS GHAR + + A + +K+SVR+TE+LV
Sbjct: 184 TNSMRLLKLDSRVQQMMVDEMISAGHARAILAISDPEQQYNAAMKVFDEKLSVRETEKLV 243
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQ 285
+ +KK + ++ LE+K+ G + I + +NNKG+ I+Y + +
Sbjct: 244 KSILT--PTKKKPVVSNPTEDAIYESLEEKMKGITGTRVFIHRKKNNKGKIEIEYYSRDD 301
Query: 286 LKIICSL 292
L I L
Sbjct: 302 LDRIIDL 308
>gi|238061905|ref|ZP_04606614.1| parB partition protein [Micromonospora sp. ATCC 39149]
gi|237883716|gb|EEP72544.1| parB partition protein [Micromonospora sp. ATCC 39149]
Length = 338
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 91/281 (32%), Positives = 152/281 (54%), Gaps = 4/281 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
I S + + I + +IVPNP PR F+ E LE+L SI+ G +Q
Sbjct: 49 IASPAVVQPSEPQLSPVPGARFAEIPVDAIVPNPKQPRQVFDEEALEELKTSIQEVGFLQ 108
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P++VRA+D Y+++ GERR+RAA+ +P I+R+ + + L A++EN+ R +LNP
Sbjct: 109 PIVVRALDGEKYELVMGERRWRAAQAVGRENIPAIVRDTRDDAMLRDALLENIHRANLNP 168
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA Y+QL+ E+G T ++ +G+SR ++N +R+L LP+ V+ + +S GHAR
Sbjct: 169 LEEAAAYQQLLEEFGATHEELARRIGRSRPQISNTIRLLNLPAQVQRRVAAGLLSAGHAR 228
Query: 198 TLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK-IFEGSREKEKYLTDL 253
L+ LA IV++ +SVR TEE+V + ++ LTDL
Sbjct: 229 ALLSLDEAQAQEQLAARIVAEGISVRSTEEIVALALADGPAKAPAAKRRTKPHAPALTDL 288
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
++S + + + +KG+ I++ T + L+ I ++G
Sbjct: 289 ADRLSDRFDTRVKVDIGRSKGKITIEFATVDDLERIVGIIG 329
>gi|189468136|ref|ZP_03016921.1| hypothetical protein BACINT_04531 [Bacteroides intestinalis DSM
17393]
gi|189436400|gb|EDV05385.1| hypothetical protein BACINT_04531 [Bacteroides intestinalis DSM
17393]
Length = 295
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 96/300 (32%), Positives = 161/300 (53%), Gaps = 17/300 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ S ++ S + I + IV NP+ PR+ F+
Sbjct: 1 MA--QKRNALGRGLDALL--------SMDEVQTEGSSSINEIELSKIVVNPNQPRHEFDE 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R + + Y+IIAGERRFRA+++A L +P IR D+++
Sbjct: 51 TALQELADSISEIGIIQPITLRKLSDDEYQIIAGERRFRASQLAGLKSIPAYIRTADDEN 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ L+ +YG TQ + VGK R+ +AN LR+LKLP+
Sbjct: 111 VMEMALIENIQREDLNSVEIALAYQHLLEQYGLTQERLSERVGKKRTTIANYLRLLKLPA 170
Query: 181 SVREMIRKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
++ ++ ++I +GHAR LV+ V + + + E + K
Sbjct: 171 PIQMALQNKQIDMGHARALVTLGDPKLQVKIFEEIIEHGYSVRKVEEIVKSLSEGEAVKS 230
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+KI + + L++++S + + KG+ I + E+L+ I +L
Sbjct: 231 GGRKIAPKRAKLPEEFNMLKQQLSGFFSTKVQLTCSEKGKGKISIPFNNEEELERIIGIL 290
>gi|91785742|ref|YP_560948.1| chromosome segregation DNA-binding protein [Burkholderia xenovorans
LB400]
gi|91689696|gb|ABE32896.1| chromosome segregation DNA-binding protein [Burkholderia xenovorans
LB400]
Length = 295
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 173/299 (57%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + + + + PR +
Sbjct: 1 MNAVARKKGLGRGLEALLGGSADITEAV-----AIEGAPHVLPLSKLQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR + Y+IIAGERRFRAA++A L EVPV+++NV +++
Sbjct: 56 GALQELAASIRAQGLMQPILVRPVSADKYEIIAGERRFRAARLAGLDEVPVLVKNVPDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L S
Sbjct: 116 AAAMALIENIQREDLNPLEEAQGIQRLLDEFNFTHEQAAESVGRSRSAVSNLLRLLNLAS 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLANQVVNKRMSVRETEKLVTTTTRTVPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
++ LE+++S + + IK R +GQ + + + L+ I L N
Sbjct: 236 RANPDGGRD--TRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILVRLRGN 292
>gi|187777377|ref|ZP_02993850.1| hypothetical protein CLOSPO_00933 [Clostridium sporogenes ATCC
15579]
gi|187774305|gb|EDU38107.1| hypothetical protein CLOSPO_00933 [Clostridium sporogenes ATCC
15579]
Length = 282
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 103/292 (35%), Positives = 169/292 (57%), Gaps = 16/292 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E +Q +S + ISI+ I PN PR F+ E +
Sbjct: 3 KKSALGKGLGALIPEKSQE----------NKDSINTISINLIKPNNEQPRKNFDEEKIGY 52
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSIK HGIIQPL+++ N + AGERR+RAAK+ + ++P ++ ++D++S LEI+
Sbjct: 53 LAQSIKEHGIIQPLVLKKEGNLYTIV-AGERRWRAAKLVGIKKIPAVVMDLDDRSVLEIS 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLN +EEA Y+ LI E+ TQ+ + +GKSR+ +AN +R+L L V++
Sbjct: 112 LIENIQRQDLNCIEEAQAYKNLIQEFKITQDILSIRIGKSRAAIANCMRLLALDKRVQQY 171
Query: 186 IRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ I+ GH R L++ + Q I+ + +SVR+TE +++ KEK+
Sbjct: 172 LIDGVITEGHGRALLALKENELQYKLSQTIIDENLSVRETERIIKNIY--KEKKNNNNIK 229
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E Y D++ K+ S +++++ NKG+ I+Y + + L+ I +L
Sbjct: 230 DNEISPYYKDIKSKLESLFDTKVNLQNNKNKGKIEIEYYSEDDLQRILDILK 281
>gi|258544327|ref|ZP_05704561.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Cardiobacterium hominis ATCC 15826]
gi|258520407|gb|EEV89266.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Cardiobacterium hominis ATCC 15826]
Length = 292
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 95/292 (32%), Positives = 169/292 (57%), Gaps = 12/292 (4%)
Query: 4 NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+ LGRG +L+GE + + + + E+ I I P + PR F + L
Sbjct: 3 KTKRGGLGRGFESLLGEAARDVIAQPEF-----EALKQIDAAKIRPGIYQPRKVFHDDTL 57
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
++L QSI HGI+QPL+VR I +G Y+IIAGERRFRA+++A L+++P +++N +++ +L
Sbjct: 58 QELAQSIAEHGILQPLVVRPIADGQYEIIAGERRFRASQIAGLTKIPCVVKNYNDQQALA 117
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+A++EN+QR DLN LE A +QL+ ++ T +VG+SRS V NILR+L+L V+
Sbjct: 118 VALIENLQRSDLNILEIASALQQLVQDFNLTHEKAAQLVGRSRSSVTNILRLLELSQPVK 177
Query: 184 EMIRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ + EI +GHAR +++ S L +++K SVR E V++ + +
Sbjct: 178 DALYSGEIEMGHARAMLTLSESQQKMLLAETLARKYSVRQIEARVKQLQTTPD----LPP 233
Query: 242 GSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSL 292
+ ++ + LE+++ + +G ++I + +G+ +KY + ++L I +
Sbjct: 234 LPKPRDVNIYALEERLGNYLGYPVAIRDNGKGRGRVVLKYNSLDELDGILAK 285
>gi|320537980|ref|ZP_08037886.1| ParB-like partition protein [Treponema phagedenis F0421]
gi|320145186|gb|EFW36896.1| ParB-like partition protein [Treponema phagedenis F0421]
Length = 303
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 153/305 (50%), Gaps = 13/305 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSID-SPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K +LG+G+ AL+ + + D + + + PNP PR F
Sbjct: 1 MA---KKSKLGKGIDALMEDPSVMADFDGSTGQSAAGDEVIKLDPELLKPNPFQPRKTFN 57
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SI+ HGIIQP+I G + IIAGERR RA+ +A L EVPV++R DN
Sbjct: 58 QENLRELADSIREHGIIQPIIAGKNAEGEFFIIAGERRTRASILAGLKEVPVVLREFDNA 117
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+A++EN+QR+DLNP+EEAL Y+ ++ Q + +GKSRS VAN LR+LKLP
Sbjct: 118 QKLEVALIENIQREDLNPIEEALAYQSIMQMNQINQEETAKKIGKSRSTVANALRLLKLP 177
Query: 180 SSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ I I+ GHAR + V+ +D L I S +SVRD E +
Sbjct: 178 EEMQNAIEDGRITAGHARAILSLVNPADMQILFNRITSSNLSVRDAENQAAVLNKGGRIA 237
Query: 237 KKIFEGSREKEK------YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
KK S + LE+++ +G + IK KG I Y T + L I
Sbjct: 238 KKETADSFIDSPKKSGFSEIKHLEQQLIDALGTKVQIKGDIEKGVIYISYFTRDDLDSIY 297
Query: 291 SLLGE 295
L
Sbjct: 298 EKLSS 302
>gi|326202779|ref|ZP_08192646.1| parB-like partition protein [Clostridium papyrosolvens DSM 2782]
gi|325986856|gb|EGD47685.1| parB-like partition protein [Clostridium papyrosolvens DSM 2782]
Length = 281
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 105/287 (36%), Positives = 159/287 (55%), Gaps = 11/287 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K+ LG+GL ALI ++ + I+ + PN PR F+ E L
Sbjct: 1 MIKKGLGKGLGALISNEALGEEA----------GILQLRINELEPNIAQPRKNFDDEKLI 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L +SIK HGIIQP+IV+ DN I AGERR+RAAK+A L EVPVI++N NK ++E+
Sbjct: 51 QLAESIKQHGIIQPIIVKKEDNSYTII-AGERRWRAAKLAGLVEVPVIVKNFSNKQTMEV 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEA + L+ EY TQ I + +GKSR +AN LR+L L + VR+
Sbjct: 110 ALIENLQREDLNPIEEAEAFLHLMDEYSLTQEQIAATIGKSRPSIANSLRLLGLTNEVRK 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
I E++ GHARTLV D + + E + K + +
Sbjct: 170 FIISGELTSGHARTLVIIQDKELQQKAAEFIIENKLSVRETENYVKKLCKGDNKDRKKTE 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICS 291
L D+E K+ + +G + ++ +NN+G+ I+Y +N++L+ +
Sbjct: 230 VNNPELIDVENKLKNILGTKVKLQSKNNRGKITIEYYSNDELERLLD 276
>gi|323467281|gb|ADX70968.1| Stage 0 sporulation protein J [Lactobacillus helveticus H10]
gi|323467324|gb|ADX71011.1| Stage 0 sporulation protein J [Lactobacillus helveticus H10]
Length = 294
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 103/293 (35%), Positives = 163/293 (55%), Gaps = 19/293 (6%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRG+ AL + Q ++ E +++ I PNP+ PR F+ + L++
Sbjct: 12 KKGGLGRGIEALFEDEPQIEETEE---------VQELNLSEIRPNPYQPRKRFDDKSLKE 62
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK +G+ QP++VR Y+IIAGERR+RA+K+A +P I+R D +E+A
Sbjct: 63 LSDSIKENGVFQPIVVRK-SVNGYEIIAGERRYRASKLAKKKTIPAIVRKFDESQMMEVA 121
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL PLEEA YE L TQ ++ +GKSR ++AN LR+L LPS + +
Sbjct: 122 VLENLQREDLTPLEEAQAYEMLQKNLCLTQEEVSKRMGKSRPYIANYLRLLTLPSKTKRL 181
Query: 186 IRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ E+S+G ART L LA+ + + + VR E LV E + KK
Sbjct: 182 LQHGELSMGQARTLLALKDKDKIDGLAKKVAQEGIPVRKVEALVNEMNA-----KKPQNK 236
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
+ +K ++ E ++S+K G +++I + KG I + + E+L I +LG
Sbjct: 237 AIKKSAFIRASENQLSNKFGASVNISETKKGKGHLSIDFTSAEELNRILDMLG 289
>gi|167764976|ref|ZP_02437097.1| hypothetical protein BACSTE_03369 [Bacteroides stercoris ATCC
43183]
gi|167697645|gb|EDS14224.1| hypothetical protein BACSTE_03369 [Bacteroides stercoris ATCC
43183]
Length = 295
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 163/296 (55%), Gaps = 15/296 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+ S ++ S + I + I NP+ PR F+ L+
Sbjct: 3 QKRNALGRGLDALL--------SMDEVQTEGSSSINEIELSKIAVNPNQPRREFDQTALQ 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI GIIQP+ +R + + Y+IIAGERRFRA++MA L+ +P IR D+++ +E+
Sbjct: 55 ELADSIAEIGIIQPITLRKLSDDEYQIIAGERRFRASQMAGLTSIPAYIRTADDENVMEM 114
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +E AL Y+ L+ +YG TQ + +GK R+ +AN LR+LKLP+ ++
Sbjct: 115 ALIENIQREDLNSVEIALAYQHLLEQYGLTQERLSERIGKKRTTIANYLRLLKLPAPIQM 174
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIV------SKKMSVRDTEELVQEQDNKKEKRKK 238
++ ++I +GHAR LV+ DP ++ V + + + E + K +K
Sbjct: 175 GLQNKQIDMGHARALVTLGDPKLQVKIFEEILEQGYSVRKVEEIVKSLSEGEAVKSGGRK 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
I + + L++++SS + + KG+ I + E+L+ I +L
Sbjct: 235 IAPKRAKLPEEFNMLKQQLSSFFSTKVQLTCSEKGKGKISIPFSNEEELERIIGIL 290
>gi|325511137|gb|ADZ22773.1| Stage 0 sporulation J, ParB family of DNA-binding proteins
[Clostridium acetobutylicum EA 2018]
Length = 283
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 105/289 (36%), Positives = 156/289 (53%), Gaps = 9/289 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRGL ALI + + E S IS++ I PN PR F+SE +
Sbjct: 3 KKGGLGRGLNALIVDTDVK--------EEENSSSQKISLNLIKPNEGQPRKNFDSEKIVQ 54
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK HGI+QPL+++ + AGERRFRAAK L EVP +I + K LEI+
Sbjct: 55 LAESIKEHGIVQPLVLKKKGKQYIIV-AGERRFRAAKSLGLKEVPAVIIDATEKEILEIS 113
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLN +EEAL Y++L+ ++ TQ + +GKSR +AN +R+L L V+E
Sbjct: 114 LIENIQREDLNLIEEALAYKRLLEDFNLTQEQLSQRIGKSRVAIANCIRLLNLDERVQEY 173
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ IS GH R L+S +D ++ + KE +K E S+E
Sbjct: 174 LIDGVISEGHGRVLLSIADKELQYKISQKIIDEDLSVRATEKLLKTYKETTEKNDEESKE 233
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ +Y+ D+ K+ G + +K NKG+ I+Y +NE L+ I +L
Sbjct: 234 ENQYIVDIRNKLEGYFGTKVLLKTNKNKGKIEIEYYSNEDLQRIIDILK 282
>gi|183222812|ref|YP_001840808.1| chromosome partitioning protein ParB [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189912844|ref|YP_001964399.1| ParB-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167777520|gb|ABZ95821.1| ParB-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167781234|gb|ABZ99532.1| Chromosome partitioning protein ParB [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 298
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 84/295 (28%), Positives = 160/295 (54%), Gaps = 10/295 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
+ LGRGL LI +++ +++ I + I PNPH PR F +++
Sbjct: 5 KGKVLGRGLGNLIPVNENNVEISKEEL----SGLREIKVSEISPNPHQPRKQFSDVSIQE 60
Query: 66 LCQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L +I HG+IQP++V+ + + ++AGERR RA K+A +++P I+R++ +E+
Sbjct: 61 LSNTIIEHGVIQPIVVQKNPSGSGFILVAGERRLRACKLAGFAKIPAIVRDLSEADMMEL 120
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR++LNP++EA Y+ +I + D+ + VGK+R+ ++N++R+L LP +++
Sbjct: 121 ALIENIQRENLNPMDEAYAYQAIIDKRALKVTDLATRVGKNRATISNLIRLLSLPKPLQD 180
Query: 185 MIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+++ ++S G AR + + +AQ ++S+ +VR+ E V N +K
Sbjct: 181 WVKEGKLSEGQARPLLSIPDSKKQFEVAQKVISESWNVREVENYVSNLLNPDKKSNSSSS 240
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHR--NNKGQFCIKYETNEQLKIICSLLG 294
+++ + LE K+ +K + + H N KG+ Y ++ I LG
Sbjct: 241 VPDKRDVSIVKLETKLRNKFSSKVEVSHNETNGKGKIVFSYANLSDMERILEQLG 295
>gi|218463267|ref|ZP_03503358.1| chromosome partitioning protein B [Rhizobium etli Kim 5]
Length = 267
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 140/263 (53%), Positives = 187/263 (71%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ E + I I + NP NPR +F+ L DL SI+ HGI+QP++VR ++ Y+
Sbjct: 2 EAERTVSADRMIPIEFVSRNPRNPRRFFDDTELHDLASSIRQHGIVQPIVVRTMERDRYE 61
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
IIAGERR+RAA++A L E+PVIIR+VD+K++LEIAIVENVQR DLNPLEEALGYEQLI+E
Sbjct: 62 IIAGERRWRAAQLAGLIEIPVIIRDVDDKTALEIAIVENVQRADLNPLEEALGYEQLIAE 121
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQ 210
YGYTQND+G I+GKSRSHVAN LR+LKLP VR+++ +S GHAR LVST DP SLA+
Sbjct: 122 YGYTQNDLGEIIGKSRSHVANSLRLLKLPDPVRDLLAAGSLSAGHARALVSTPDPASLAR 181
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
IV+K MSVRD E+L Q + + ++ +K+ LE+ +S +GL +SI H+
Sbjct: 182 TIVAKGMSVRDAEKLAQNNIKAQSEPQQTASRRDQKDSDTLALERTLSDALGLEVSINHK 241
Query: 271 NNKGQFCIKYETNEQLKIICSLL 293
+ GQ I Y++ EQL+ +C LL
Sbjct: 242 TSGGQIKISYKSLEQLEEVCRLL 264
>gi|315607701|ref|ZP_07882695.1| chromosome partitioning protein SpoOJ [Prevotella buccae ATCC
33574]
gi|315250637|gb|EFU30632.1| chromosome partitioning protein SpoOJ [Prevotella buccae ATCC
33574]
Length = 302
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 169/303 (55%), Gaps = 17/303 (5%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
++N LGRGL ALI S E + + ++I I NP+ PR F+ E
Sbjct: 8 NSNAKSNALGRGLDALI--------STETVRTQGSSTINEVAIDRIEANPNQPRREFDEE 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L SI+ GIIQP+ +R D+ ++IIAGERR+RA+++A L +P IR +D+++
Sbjct: 60 ALQELAHSIRQIGIIQPITLRQTDDNRFQIIAGERRWRASQLAGLKAIPAYIRTIDDENV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L+ + G TQ I VGKSR+ +AN LR+LKLP+
Sbjct: 120 MEMALVENIQREDLNSIEIALAYEHLLEKSGMTQEKISERVGKSRAAIANYLRLLKLPAQ 179
Query: 182 VREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR-- 236
V+ ++K+EI +GHAR L+ S S + L + I SVR EELVQ+ N +
Sbjct: 180 VQMALQKKEIDMGHARALLALDSPSLQIKLFKEIQKNGFSVRKVEELVQQLKNGIDIEAG 239
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC---SL 292
KK + + L++ +S + + KG+ I + +L+ I
Sbjct: 240 KKKIAAKSQLPEEFNLLKEHLSGFFNTKVQMTCSSKGKGKISIPFANEAELERIMNVFDK 299
Query: 293 LGE 295
L +
Sbjct: 300 LKD 302
>gi|293376418|ref|ZP_06622652.1| ParB-like protein [Turicibacter sanguinis PC909]
gi|292644974|gb|EFF63050.1| ParB-like protein [Turicibacter sanguinis PC909]
Length = 292
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 97/295 (32%), Positives = 157/295 (53%), Gaps = 7/295 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS N RLGRGL AL E + ++ + E + + ++ PNP+ PR YF+
Sbjct: 1 MSTN----RLGRGLGALFQEHDIESIESFEQVKE-GEVVQQLDVKTLRPNPYQPRKYFDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +L SIK HG+ QP+IV+ D Y IIAGERRFRAA+ A+L +P I+R ++
Sbjct: 56 TKINELALSIKEHGVFQPIIVKK-DIKGYIIIAGERRFRAAQKANLQTIPAIVREFNDHL 114
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E A++EN+QR+DL +EEA Y+ L+ + TQ + +GKSR+++AN +R+L+LP
Sbjct: 115 MMEYALIENLQREDLTAIEEAEAYKMLMQKLDLTQERLAERIGKSRAYIANTMRLLQLPR 174
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V++ I IS+GH + L D + + K EL + + +I
Sbjct: 175 VVQDDIENNIISVGHGKVLAGLKDEDLIIKFANVIKEKQISVRELEDLIKDASINQPEIE 234
Query: 241 EG-SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ ++ +L ++ + S G + IK + KGQ I Y + L + ++G
Sbjct: 235 KKVTKVLNPHLDYVKTNLESYFGTKVKIKEKQGKGQIIINYNDLDNLNHLLEIMG 289
>gi|295108600|emb|CBL22553.1| ParB-like partition proteins [Ruminococcus obeum A2-162]
Length = 313
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 174/308 (56%), Gaps = 24/308 (7%)
Query: 6 SKRRLGRGLAALIGEVN-----------------QSIDSPEKKTETIPESQDCISIHSIV 48
K LGRGL AL E + ++ + + + + I
Sbjct: 4 KKSGLGRGLDALFPEKTVQSKPKTTVKTAKQTNTATPETKKSSQHENSNGERMMKLSMIE 63
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
PN PR F+ + +++L SIK +G++QPL+V + Y+I+AGERR+RAAK+A L E
Sbjct: 64 PNREQPRKKFDEDAIQELADSIKQYGVLQPLLV-SDKKDYYEIVAGERRWRAAKLAGLKE 122
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
VPV++R + + +EI+++EN+QR+DLNP+EEA+ Y++LI E+ Q++I V KSR+
Sbjct: 123 VPVVVRELSTQEIVEISLIENIQREDLNPVEEAMAYKRLIDEFHMKQDEIAERVSKSRTA 182
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEEL 225
V N +R+LKL + V++M+ E IS GHAR ++ + A + +K+SVR+TE+L
Sbjct: 183 VTNSMRLLKLDARVQQMMVDEMISAGHARAILAIEDPEKQYTTAMKVFDEKLSVRETEKL 242
Query: 226 VQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNE 284
V+ ++++ K+ + + LE+++ G + I + +NNKG+ I+Y + +
Sbjct: 243 VKTILTPQKRKDKVTNPAE--DAIYESLEERMKGITGTRVFIHRKKNNKGKIEIEYYSRD 300
Query: 285 QLKIICSL 292
L I L
Sbjct: 301 DLDRIIDL 308
>gi|187476518|ref|YP_784542.1| chromosome partitioning protein [Bordetella avium 197N]
gi|115421104|emb|CAJ47588.1| chromosome partitioning protein [Bordetella avium 197N]
Length = 301
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 101/296 (34%), Positives = 171/296 (57%), Gaps = 8/296 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL AL+G +ID+ K E + I + + PR +
Sbjct: 1 MATKKPK-GLGRGLDALLGADVPAIDNIGKAVEPESALPTTLPIDRLRAGKYQPRTRMDE 59
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L +L +S+++ GI+QP++VR + Y+IIAGERRFRAA++A L EVPV++R+V ++
Sbjct: 60 GALNELAESVRTQGIMQPILVRGLAIPGQYEIIAGERRFRAAQLAGLKEVPVLVRDVADE 119
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++ +A++EN+QR+DLNPLEEA G +L+ E+G T +G+SRS +N+LR+L L
Sbjct: 120 NAAIMALIENIQREDLNPLEEAQGVRRLLDEFGLTHEQAAQAIGRSRSATSNLLRLLNLA 179
Query: 180 SSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M+ +I +GHAR L V + + LA +I+++++SVR+ E++V ++ +
Sbjct: 180 VPVQTMLLAGDIDMGHARALLAVDAATQIQLANLIIARRLSVREAEKIVA---KTVKEGE 236
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+ + +T LE+ +S +G + +K +KGQ I + + L +
Sbjct: 237 ATSPKKKGPSRDVTRLEEALSDHLGTRVVLKVGARDKGQLVIDFHGWDHLNSLLER 292
>gi|325839317|ref|ZP_08166783.1| stage 0 sporulation protein J [Turicibacter sp. HGF1]
gi|325490599|gb|EGC92914.1| stage 0 sporulation protein J [Turicibacter sp. HGF1]
Length = 292
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 97/295 (32%), Positives = 156/295 (52%), Gaps = 7/295 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS N RLGRGL AL E + ++ + E + + ++ PNP+ PR YF+
Sbjct: 1 MSTN----RLGRGLGALFQEHDIESIESFEQVKE-GEVVQQLDVKTLRPNPYQPRKYFDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +L SIK HG+ QP+IV+ D Y IIAGERRFRAA+ A+L +P I+R ++
Sbjct: 56 TKINELALSIKEHGVFQPIIVKK-DIKGYIIIAGERRFRAAQKANLQTIPAIVREFNDHL 114
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E A++EN+QR+DL +EEA Y+ L+ + TQ + +GKSR+++AN +R+L+LP
Sbjct: 115 MMEYALIENLQREDLTAIEEAEAYKMLMQKLDLTQERLAERIGKSRAYIANTMRLLQLPR 174
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V++ I IS+GH + L D + + K EL + +I
Sbjct: 175 VVQDDIENNIISVGHGKVLAGLKDEDLIIKFANVIKEKQISVRELEDLIKEASINQPEIE 234
Query: 241 EG-SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ ++ +L ++ + S G + IK + KGQ I Y + L + ++G
Sbjct: 235 KKVTKVLNPHLDYVKTNLESYFGTKVKIKEKQGKGQIIINYNDLDNLNHLLEIMG 289
>gi|9968460|emb|CAC06098.1| ParB protein [Listeria monocytogenes]
Length = 283
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 93/286 (32%), Positives = 158/286 (55%), Gaps = 12/286 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL +T E+ I+I I PNP+ PR F+++ + +L
Sbjct: 3 KGLGKGINALF-----------NNVDTNEETVQNIAIKEIKPNPYQPRKIFDAKAINELR 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R D G Y+I+ GERR+RAAK A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNTDKG-YEIVVGERRYRAAKEAKLKEIPAVVRDLTEEEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ + TQ + VGKSR ++AN +R+L LP V+ M+R
Sbjct: 111 ENLQREDLSPLEEAESYQFLMKKLSLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ +L +N E +
Sbjct: 171 DGSLSAGHGRVLLGLKLKKNIIPTAKKAVAQGLTVRQLEDVVNNLNENVSRETIKPARVP 230
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + + ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 231 IFIRESQSQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 276
>gi|328948891|ref|YP_004366228.1| parB-like partition protein [Treponema succinifaciens DSM 2489]
gi|328449215|gb|AEB14931.1| parB-like partition protein [Treponema succinifaciens DSM 2489]
Length = 317
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 105/314 (33%), Positives = 170/314 (54%), Gaps = 24/314 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTE-----------------TIPESQDCIS 43
M+ + + LG+GL AL+ E + S + E + + +
Sbjct: 1 MAKH---QGLGKGLGALMQEADLSEEISENGVQLKENASPVNLNLPTGISSDENGTLWVD 57
Query: 44 IHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKM 103
+ PNP PR YF+ E L +L +S+++ GI+ P+I+ ++G + IIAGERR RAAK
Sbjct: 58 PALLKPNPRQPRTYFDDEKLAELTESVRNEGILSPVIIEDANDGTFFIIAGERRTRAAKA 117
Query: 104 ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVG 163
A L ++PV +R + LE+A++EN+QR DLN LEEA Y L+ TQ+ + VG
Sbjct: 118 AGLKKIPVQLRKYSEQRKLEVALIENIQRTDLNALEEAQAYYDLMELGNLTQDQVAERVG 177
Query: 164 KSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVR 220
K+RS VAN LR+LKLP +++ + + IS GHAR ++ + SD L I+ + +SVR
Sbjct: 178 KNRSTVANCLRLLKLPEDIQKALVTDSISSGHARAILSLENDSDKRILFGKIIGQGLSVR 237
Query: 221 DTEELVQEQDNKKEKRKKIF-EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+E + +E + K + +K+ L LE+K+ ++G + +K +KG I
Sbjct: 238 QSENIAKEMKSGISSVAKTDLKPEPKKDPNLAALEQKLIERLGTKVQLKGGFSKGTISIN 297
Query: 280 YETNEQLKIICSLL 293
Y ++E L I +L+
Sbjct: 298 YFSSEDLDRIFNLI 311
>gi|238021505|ref|ZP_04601931.1| hypothetical protein GCWU000324_01405 [Kingella oralis ATCC 51147]
gi|237868485|gb|EEP69491.1| hypothetical protein GCWU000324_01405 [Kingella oralis ATCC 51147]
Length = 281
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 97/294 (32%), Positives = 166/294 (56%), Gaps = 14/294 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K LGRGL +LI + + I I I P+ + R F+
Sbjct: 1 MSKP--KSGLGRGLDSLIALSGNLPPAEQDN------RLTHIPITQIRPSRYQARTQFDD 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L++L SIK+ GIIQP+ VR Y++IAGERR RAA++A L+EVPV+I+++++K+
Sbjct: 53 DSLQELADSIKAQGIIQPITVREYGLDNYELIAGERRLRAAQLAGLTEVPVVIKHINDKT 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ + ++EN+QR++LNP+EEA G +LI E+ T I +G+SRS + N LR+LKLP
Sbjct: 113 AMAMGLIENIQRENLNPIEEAQGLRRLIDEFELTHEAIAQAIGRSRSTITNSLRLLKLPE 172
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+++M+ + + +GHAR L++ L + K + V+E + + ++ K
Sbjct: 173 PIQDMMAQHHLEMGHARALINLPVQQQLELAHKAVKNAWS-----VRETERRSQEILKDK 227
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQLKIICSLL 293
+ + + ++++ K+G+ + IK RN K GQ +K+ + EQ + + L
Sbjct: 228 PAPAQPHPDIQHIAEQLTEKLGVLVEIKTRNQKSGQIILKFNSPEQFEQLLEHL 281
>gi|145301180|ref|YP_001144021.1| chromosome partitioning protein ParB [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853952|gb|ABO92273.1| chromosome partitioning protein ParB [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 302
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 92/296 (31%), Positives = 163/296 (55%), Gaps = 16/296 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSID--------SPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
KR LG+GL AL+ + + E T + + + + PR
Sbjct: 4 KKRGLGKGLDALLSTSTAARQKQVMSDQRTEEAMAPTNQGELRRLPVEWLQSGKYQPRKD 63
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ LEDL SI++ G+IQP++VR + ++IIAGERR+RA+++A L VP I+++V
Sbjct: 64 MSQDALEDLANSIRAQGVIQPIVVRPLGEQSFEIIAGERRWRASQLARLDVVPCIVKDVP 123
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+++++ IA++EN+QR+DLN +EEA+ ++L++E+ T + VGKSR+ V N+LR+ +
Sbjct: 124 DEAAVAIALIENIQREDLNAIEEAVALQRLLTEFELTHQQVAEAVGKSRTTVTNLLRLNQ 183
Query: 178 LPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L V+ + ++ +GHAR L +S LA+++ K ++VRDTE+LVQ+
Sbjct: 184 LNDDVKRFVEHGDLDMGHARALLALSGQAQSELAKLVAQKGLTVRDTEKLVQKALE---- 239
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC 290
+ ++ LE+++S K+G + ++ + + G+ I Y L I
Sbjct: 240 -PAKAKVEPVRDPQFGYLERQLSEKIGNQVQLQVGKQDSGKLVISYVDLTDLDRIL 294
>gi|307731467|ref|YP_003908691.1| parB-like partition protein [Burkholderia sp. CCGE1003]
gi|307586002|gb|ADN59400.1| parB-like partition protein [Burkholderia sp. CCGE1003]
Length = 295
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 102/299 (34%), Positives = 174/299 (58%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + + + + + PR +
Sbjct: 1 MNAVARKKGLGRGLEALLGGSADITEAV-----AIEGAPNVLPLSKMQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GALQELAASIRAQGLMQPILVRPVSADKYEIIAGERRFRAARLAGLEEVPVLVKDVPDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L
Sbjct: 116 AAAMALIENIQREDLNPLEEAQGIQRLLDEFNFTHEQAAESVGRSRSAVSNLLRLLNLAP 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V ++ ++LA +V+K+MSVR+TE+LV K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDSATQITLANQVVNKRMSVRETEKLVTATAKAAPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
++ LE+++S + + IK R +GQ + + + L+ I L N
Sbjct: 236 RANPDGGRD--TRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILVRLRGN 292
>gi|227506194|ref|ZP_03936243.1| stage 0 DNA-binding protein [Corynebacterium striatum ATCC 6940]
gi|227197218|gb|EEI77266.1| stage 0 DNA-binding protein [Corynebacterium striatum ATCC 6940]
Length = 337
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 101/336 (30%), Positives = 172/336 (51%), Gaps = 45/336 (13%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP-------------------------------- 28
M+ + + LG+GLAALI +
Sbjct: 1 MAE-HKQGGLGKGLAALIPSGPDAPSRKPRLGNDAADIILGAATGGPAGDKRRVKGAPTI 59
Query: 29 --------EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ K I + I++ I+PNP PR F+ EGL +L SIK G++QP++
Sbjct: 60 QQSNSKKRQAKPSVIGATYREIAVGDIIPNPKQPRTVFDEEGLAELVHSIKEFGLLQPVV 119
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR D G +++I GERR+RA+ A L+ +P I+R+ + L A++EN+ R LNPLEE
Sbjct: 120 VRPADEGGFELIMGERRWRASSKAGLATIPAIVRDTKDDDLLRDALLENIHRVQLNPLEE 179
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL- 199
A Y+QL+ E+G TQN++ +G+SR V N++R+LKLP +V++ + +S GHAR +
Sbjct: 180 AHAYQQLLEEFGVTQNELADRIGRSRPQVTNMIRLLKLPVNVQKRVAAGTLSGGHARAIL 239
Query: 200 --VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ +A ++++ +SVR TEE V EK +K + + + +Y TD +++
Sbjct: 240 GLPDSEAMEIVANRVIAEGLSVRATEEAVTLYKK-GEKPQKEKKPAAAQPQYFTDSAERL 298
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
S + +++ KG+ +++ E + I +L+
Sbjct: 299 SDRFDTKVTVTMGKRKGKMVVEFGDQEDFERILALI 334
>gi|116874149|ref|YP_850930.1| ParB family chromosome partioning protein [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116743027|emb|CAK22151.1| chromosome partition protein, ParB family [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 283
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 92/286 (32%), Positives = 156/286 (54%), Gaps = 12/286 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL + E+ I+I I PNP+ PR F+++ + +L
Sbjct: 3 KGLGKGINALF-----------NNVDANEETVQNIAIKEIKPNPYQPRKIFDTKAINELR 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R G Y+I+ GERRFRAAK A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNAKKG-YEIVVGERRFRAAKEAKLKEIPAVVRDLTEEEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ + TQ + VGKSR ++AN +R+L LP V+ M+R
Sbjct: 111 ENLQREDLSPLEEAESYQFLMKKLSLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ +L +N + +
Sbjct: 171 DGSLSAGHGRVLLGLKLKKNIIPTAKKAVAQGLTVRQLEDVVNNLNDNVSRETIKPARVP 230
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 231 IFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 276
>gi|324999874|ref|ZP_08120986.1| parB-like partition protein [Pseudonocardia sp. P1]
Length = 323
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 103/321 (32%), Positives = 159/321 (49%), Gaps = 30/321 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGE------------------------VNQSIDSPEKKTETIP 36
M+ K LGRGLAALI V + E
Sbjct: 1 MAE--RKGGLGRGLAALIPTGPAEGGEQPGSNGAGAPLHRPAPAVQREDAETETPVVDGG 58
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
I + IVPNP PR F+ E L +L SI+ G++QP++VR Y++I GER
Sbjct: 59 AEYREIPLKRIVPNPKQPRTQFDDEQLGELEHSIREFGLLQPIVVRRSGRD-YELIMGER 117
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RAA+ A L +P I+R+ + L A++EN+ R LNPLEEA YEQL+ E+G T +
Sbjct: 118 RWRAAQRAGLDTLPAIVRHTADDVMLRDALLENIHRVQLNPLEEAAAYEQLLGEFGVTHS 177
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIV 213
++ +G+SR V N++R+LKLP +V+ + +S GHAR L+ LA IV
Sbjct: 178 ELADRLGRSRPVVTNMIRLLKLPVTVQRRVAAGVLSAGHARALLGLEDAGRQEDLATRIV 237
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK 273
++ +SVR TEE V R++ E+ T+ ++S + + ++ K
Sbjct: 238 AEGLSVRATEEAVVLARQDGPPRERRARKRGEQRPEFTERADRLSDRFDTRVKVEMGQRK 297
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G+ +++ + E L I ++G
Sbjct: 298 GRIVVEFGSVEDLDRITGMMG 318
>gi|149925400|ref|ZP_01913664.1| parB-like partition protein [Limnobacter sp. MED105]
gi|149825517|gb|EDM84725.1| parB-like partition protein [Limnobacter sp. MED105]
Length = 293
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 106/297 (35%), Positives = 173/297 (58%), Gaps = 13/297 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+G ++ + E + + + + PR+ +
Sbjct: 1 MNAIKRTKGLGRGLEALLGPSGDDVNKD------MGEQVMTLPLGKLQAGKYQPRSRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L +SIKS GI+QP++VR I +G Y+IIAGERRFRA+K+A L EVPV++R V ++S
Sbjct: 55 SSLMELAESIKSQGIMQPILVRPIGSGKYEIIAGERRFRASKLAGLEEVPVLVRAVPDES 114
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L +A++EN+QR+DLNPLEEALG ++LI E+ T D +G+SRS +N+LR+L L
Sbjct: 115 ALAMALIENIQREDLNPLEEALGVQRLIREFNLTHEDAARAIGRSRSATSNMLRLLNLAE 174
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ +I +GHAR L++ + A +V+K++SVR+TE+LV N
Sbjct: 175 PVQTMLLAGDIEMGHARALLALTAAEQIACANEVVNKRLSVRETEKLV----NDWSSDAD 230
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
++ + LE+ ++ + + +K + N KG IK+ ++L + +G
Sbjct: 231 RQSAKPKQTADVRRLEEGLADWLASAVQLKANANGKGSVTIKFNNLDELDGVLERIG 287
>gi|254818671|ref|ZP_05223672.1| ParB-like partition proteins [Mycobacterium intracellulare ATCC
13950]
Length = 331
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 32/321 (9%)
Query: 6 SKRRLGRGLAALIGEVNQSIDS------------------------PEKKTETIPESQDC 41
K LGRGLA+LI DS T ++
Sbjct: 7 KKGGLGRGLASLIPTGPAEGDSGPATLGPRMGDAAADVLIGGPPPQDASATASMGAVYRE 66
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG----LYKIIAGERR 97
I+ I NP PR F+ E L +L SI+ G++QP++VRA+ + Y+I+ GERR
Sbjct: 67 IAPADIERNPRQPRQVFDEEALAELVHSIREFGLLQPIVVRAVKDSASGARYQIVMGERR 126
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
+RAA+ A L+ +P I+R + L A++EN+ R LNPLEEA Y+QL+ E+G T ++
Sbjct: 127 WRAAQEAGLATIPAIVRETGDDDLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHDE 186
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS----TSDPLSLAQVIV 213
+ + +G+SR + N++R+LKLP +V+ + +S GHAR L+S LA IV
Sbjct: 187 LAARIGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEELATRIV 246
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK 273
++ +SVR TEE V + + L D+ ++S+ +++ K
Sbjct: 247 AEGLSVRATEEAVTLANRSGATAPTPPRRKPIQMPGLQDVADRLSTAFDTRVTVSLGKRK 306
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G+ +++ + + L+ I ++
Sbjct: 307 GKIVVEFGSVDDLQRIIEVMS 327
>gi|119503563|ref|ZP_01625646.1| predicted transcriptional regulator [marine gamma proteobacterium
HTCC2080]
gi|119460625|gb|EAW41717.1| predicted transcriptional regulator [marine gamma proteobacterium
HTCC2080]
Length = 301
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 86/303 (28%), Positives = 169/303 (55%), Gaps = 17/303 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPES-----------QDCISIHSIVPNPHN 53
+ +LG+ L L+G V SP + + + + P +
Sbjct: 1 MKRGKLGKDLDVLLGAVELPRMSPGGSDDAAINQEGVTRSSDDPGLKFLPLERLKPGKYQ 60
Query: 54 PRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVII 113
PR F+ L++L +SI+S G++QP++VRAID ++IIAGERR+RA+++A + ++P +I
Sbjct: 61 PRQEFDEASLQELAESIRSQGVLQPIVVRAIDENQWEIIAGERRWRASQLAGIDKIPALI 120
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
R+V +++++ +A++EN+QR++LN +EEA +L +E+ +Q + VGKSR +AN++
Sbjct: 121 RDVSDEATIAMALIENIQRENLNAIEEAEALRRLQTEFALSQQQVAERVGKSRPVIANLM 180
Query: 174 RILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
R+L L V+ M+ ++ GH + L + + + +A+ ++ +SVR TE LV+
Sbjct: 181 RLLVLEPVVKTMLETGGLNTGHGKVLLALEGTAQIKVAKKVLKGGLSVRQTESLVKSAQK 240
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIIC 290
K + + LE++++ ++G +++I + + +G+ I Y + ++L I
Sbjct: 241 PTATAVKDVTAA---NPDVMSLERELTGRLGSSVTIAQGKGQRGKLVITYSSFDELDGIL 297
Query: 291 SLL 293
S +
Sbjct: 298 SRI 300
>gi|218129228|ref|ZP_03458032.1| hypothetical protein BACEGG_00804 [Bacteroides eggerthii DSM 20697]
gi|317475203|ref|ZP_07934470.1| ParB-like partition protein [Bacteroides eggerthii 1_2_48FAA]
gi|217988606|gb|EEC54926.1| hypothetical protein BACEGG_00804 [Bacteroides eggerthii DSM 20697]
gi|316908656|gb|EFV30343.1| ParB-like partition protein [Bacteroides eggerthii 1_2_48FAA]
Length = 295
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 96/300 (32%), Positives = 162/300 (54%), Gaps = 17/300 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ S ++ S + I + I NP+ PR F+
Sbjct: 1 MA--QKRNALGRGLDALL--------SMDEVQTEGSSSINEIELSKIAVNPNQPRREFDP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L +SI GIIQP+ +R + + Y+IIAGERRFRA+++A L+ +P IR D+++
Sbjct: 51 TALQELAESIAEIGIIQPITLRKLSDDEYQIIAGERRFRASQIAGLTSIPAYIRTADDEN 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ L+ EYG TQ + VGK R+ +AN LR+LKLP+
Sbjct: 111 VMEMALIENIQREDLNSVEIALAYQHLLEEYGLTQERLSERVGKKRTTIANYLRLLKLPA 170
Query: 181 SVREMIRKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
++ ++ ++I +GHAR L++ V + + + E + K
Sbjct: 171 PIQMGLQNKQIDMGHARALITLGDPKLQVKIFEEILEHGYSVRKVEEIVKSLNEGETIKS 230
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+KI + + L++++SS + + KG+ I + E+L+ I +L
Sbjct: 231 GGRKIAPKRSKLPEEFNMLKQQLSSFFSAKVQLTCSEKGKGKISIPFSNEEELERIIGIL 290
>gi|187925871|ref|YP_001897513.1| parB-like partition protein [Burkholderia phytofirmans PsJN]
gi|187717065|gb|ACD18289.1| parB-like partition protein [Burkholderia phytofirmans PsJN]
Length = 295
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 107/299 (35%), Positives = 176/299 (58%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ TI + + + + + + PR +
Sbjct: 1 MNAVARKKGLGRGLEALLGGTADITEAV-----TIEGAPNVLPLSKMQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I Y+IIAGERRFRAA++A L EVPV+++NV +++
Sbjct: 56 GALQELAASIRAQGVMQPILVRPISADRYEIIAGERRFRAARLAGLDEVPVLVKNVPDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L S
Sbjct: 116 AAAMALIENIQREDLNPLEEAQGIQRLLDEFDFTHEQAAESVGRSRSAVSNLLRLLNLAS 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLANQVVNKRMSVRETEKLVTATTKAAPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
G ++ LE+++S + + IK R +GQ + + + L+ I L N
Sbjct: 236 RANGDGGRD--TRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILVRLRGN 292
>gi|116334623|ref|YP_796150.1| Spo0J-like protein [Lactobacillus brevis ATCC 367]
gi|116099970|gb|ABJ65119.1| chromosome segregation DNA-binding protein [Lactobacillus brevis
ATCC 367]
Length = 294
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 113/301 (37%), Positives = 173/301 (57%), Gaps = 20/301 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+N K LGRG+ AL E +T E+ +++ I PNP+ PR F+
Sbjct: 1 MANKKEKS-LGRGIDALF---------AENGVDTAEENVVDLTLADIRPNPYQPRQKFDQ 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+GL DL SI+ G+ QP+IVR D Y+I+AGERRFRA+K+A + +P I+R+V
Sbjct: 51 KGLNDLAASIEKTGVFQPIIVRQPDKTLERYEILAGERRFRASKLAGKTTIPGIVRDVTE 110
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +EIA++EN+QR+DL PLEEA Y+ L+++ TQ + +GKSR ++AN LR+L L
Sbjct: 111 EQMMEIAVLENLQREDLTPLEEAEAYDTLMTKLTLTQAQVSERLGKSRPYIANYLRLLGL 170
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLS---LAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P +V++M++ E+S+G ARTL+S D LA+ V + M+VR E V + + +K
Sbjct: 171 PKAVKDMLQHNELSMGQARTLLSLKDKTKLVALAKRAVEQGMTVRALEAEVSKLNGAAKK 230
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK---GQFCIKYETNEQLKIICSL 292
K +K +L E ++ + G +SI K G+ I+Y +N+ L I L
Sbjct: 231 LAKKPAK--KKSPFLRSTENQLQERFGTQVSINESQGKDQQGRIEIEYLSNDDLNRILDL 288
Query: 293 L 293
L
Sbjct: 289 L 289
>gi|254000524|ref|YP_003052587.1| parB-like partition protein [Methylovorus sp. SIP3-4]
gi|313202483|ref|YP_004041141.1| parb-like partition protein [Methylovorus sp. MP688]
gi|253987203|gb|ACT52060.1| parB-like partition protein [Methylovorus sp. SIP3-4]
gi|312441799|gb|ADQ85905.1| parB-like partition protein [Methylovorus sp. MP688]
Length = 283
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 96/293 (32%), Positives = 168/293 (57%), Gaps = 16/293 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+ +++ + + + + + P + PR + + E L
Sbjct: 2 VKHKGLGRGLDALLSGDMETVRDAD--------TLRSLKVGQLQPGKYQPRTHMDQESLS 53
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L SIK+ GI+QP++VR + + Y+IIAGERR+RAA++A L EVPV++R + ++++L +
Sbjct: 54 SLADSIKAQGIMQPIVVRLLSDEHYEIIAGERRWRAAQLAGLEEVPVLVREIADEAALAM 113
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNPLEE+ G ++LI E+ T VG+SRS V N+LR+ L +V+E
Sbjct: 114 ALIENIQREDLNPLEESNGIKRLIEEFSMTHEAAAQAVGRSRSAVTNLLRLQNLHGNVQE 173
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
M+ ++ +GHAR L + +++A+ I K +SVR+ E LV++ + + +
Sbjct: 174 MLMIGKLDMGHARALLTLPEVKQITVAEHIAQKSLSVREAERLVKQMLS-----EPKAKP 228
Query: 243 SREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ ++ + L++++S +G + IK + G I Y +QL L
Sbjct: 229 EKTVDRDVLALQEEVSQSLGAQVEIKASKKGAGFVKIHYANLDQLDDFLKRLK 281
>gi|90581143|ref|ZP_01236942.1| Putative ParB family protein [Vibrio angustum S14]
gi|90437664|gb|EAS62856.1| Putative ParB family protein [Vibrio angustum S14]
Length = 299
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 94/302 (31%), Positives = 179/302 (59%), Gaps = 14/302 (4%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEK------KTETIPESQDCISIHSIVPNPHNPRN 56
N++KR LG+GL AL+ + + T I ++I + PR
Sbjct: 1 MNFNKRGLGKGLDALLSTSAVAQAKQQTQQQAALSTSNIDSELRELAIERLQLGQFQPRK 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ L +L +SI++ GIIQP++VR + + ++IIAGERR++AAK+A L+ VP ++++V
Sbjct: 61 SMADDTLAELAESIRAQGIIQPIVVRRLADQSFEIIAGERRWQAAKIAGLTTVPCLVKSV 120
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D+++++ IA++EN+QR+DLN +EEA+ +L E+ T I VGKSR+ V+N+LR+
Sbjct: 121 DDRATIAIALIENIQREDLNVIEEAVALARLQQEFSLTHQQIAEAVGKSRAAVSNLLRLN 180
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKE 234
+L V++++ ++++ +GHAR L+S + AQ IV+ ++VR+ E+LV+ N
Sbjct: 181 QLSEPVKQLVEQKKLEMGHARALLSLDETQQLAAAQKIVNNLLTVREAEKLVKTLLN--- 237
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
I + + +++ L+ +++ + G ++I ++ KG+ I ++ ++L+ I ++L
Sbjct: 238 --PSIPKAPASQSEHVVLLQNRLTEQFGTKVAINQTKSGKGKIVINFDQQDKLEQILAML 295
Query: 294 GE 295
Sbjct: 296 EN 297
>gi|323527849|ref|YP_004230002.1| parB-like partition protein [Burkholderia sp. CCGE1001]
gi|323384851|gb|ADX56942.1| parB-like partition protein [Burkholderia sp. CCGE1001]
Length = 295
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 102/299 (34%), Positives = 174/299 (58%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + + + + + PR +
Sbjct: 1 MNAVARKKGLGRGLEALLGGSADITEAV-----AIEGAPNVLPLSKMQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GALQELAASIRAQGLMQPILVRPVSADKYEIIAGERRFRAARLAGLEEVPVLVKDVPDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L +
Sbjct: 116 AAAMALIENIQREDLNPLEEAQGIQRLLDEFNFTHEQAAESVGRSRSAVSNLLRLLNLAT 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLANQVVNKRMSVRETEKLVTATTKAAPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
++ LE+++S + + IK R +GQ + + + L+ I L N
Sbjct: 236 RANPDGGRD--TRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILVRLRGN 292
>gi|255320526|ref|ZP_05361707.1| chromosome-partitioning protein ParB [Acinetobacter radioresistens
SK82]
gi|262378418|ref|ZP_06071575.1| chromosome partitioning protein parB [Acinetobacter radioresistens
SH164]
gi|255302498|gb|EET81734.1| chromosome-partitioning protein ParB [Acinetobacter radioresistens
SK82]
gi|262299703|gb|EEY87615.1| chromosome partitioning protein parB [Acinetobacter radioresistens
SH164]
Length = 295
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 95/295 (32%), Positives = 178/295 (60%), Gaps = 13/295 (4%)
Query: 5 YSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
KR L GRGL AL+G + + E ++ I +H + + PR + E +
Sbjct: 3 TKKRGLAKGRGLDALLGSIQKEKLQLEAQS-LDHGQLKQIDVHLLKRGEYQPRRFIEEKD 61
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI+ HG++QP+++R +D+ Y+IIAGERR+RAA++A L+EVP I+R+++++
Sbjct: 62 LQELAASIEKHGVMQPIVIRPVDDEKRPYEIIAGERRWRAAQLAGLTEVPAIVRDLNDQV 121
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+++A+ ++ E+G + +I VGK+R+ V+N+LR+L L
Sbjct: 122 AIALALIENIQRQDLNPIDQAIALQRFHDEFGLSHQEIAETVGKARTTVSNLLRLLSLAE 181
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++ +++ + +GHAR ++ + D L A ++ K +SVR TE+LV+E + K
Sbjct: 182 PVKDFMQQGLLDMGHARAILTLKSKDQLKAADTVIEKSLSVRQTEQLVREWNT-----PK 236
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+ L L +++S + ++ I ++ KG+ I Y + ++L I ++
Sbjct: 237 QEKNKTSMSADLEQLTQRLSERFSADVKIDYNKQGKGKLVIHYHSLDELDGILNI 291
>gi|217978729|ref|YP_002362876.1| parB-like partition protein [Methylocella silvestris BL2]
gi|217504105|gb|ACK51514.1| parB-like partition protein [Methylocella silvestris BL2]
Length = 294
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 123/297 (41%), Positives = 176/297 (59%), Gaps = 11/297 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ ++ RLGRGLAALIGE + E + Q I + PNP NPR F+
Sbjct: 7 AAEEARPRLGRGLAALIGE------AAEPAGDARSRGQKKAPIEFLRPNPRNPRRAFDEA 60
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
LEDL SI+ G+IQP++VR N Y+IIAGERR+RAA+ A L EVP+++ +
Sbjct: 61 ELEDLASSIREKGVIQPILVRPAKNLVDAYEIIAGERRWRAAQRAGLHEVPIVVVEATDA 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+LE+AI+ENVQR DLN LEEA GYE+L +E+ Y+ DI ++GKSRSHVAN +R+ KLP
Sbjct: 121 EALELAIIENVQRSDLNALEEAAGYERLGAEFSYSHADIARLIGKSRSHVANTMRLTKLP 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
R ++ + ++ GHAR L+ P +A+ IV++ +SVRD E L+QE+ + K+
Sbjct: 181 ERTRALLAEGRLTAGHARALLMIDQPDQVAERIVAEGLSVRDVERLLQEKGD---TSKRG 237
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
EK+ LE +S+ +GL ++I +G+ I Y T EQL + L
Sbjct: 238 GPRKAEKDPNTRALELALSTGLGLKVTIAAAGERGELRIAYLTLEQLDAVVRRLNPG 294
>gi|194337449|ref|YP_002019243.1| parB-like partition protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194309926|gb|ACF44626.1| parB-like partition protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 298
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 105/296 (35%), Positives = 161/296 (54%), Gaps = 9/296 (3%)
Query: 4 NYSKRRLGRGLAALIGEVN-QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+ K+ LGRGL AL E S+ E + S + + I NP PR F+
Sbjct: 3 DMPKKVLGRGLKALFHEEEFVSVSKDEAEEPAEVGSIGSLPVDKITVNPFQPRKEFDETA 62
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSS 121
LE+L SI +G+IQP+ V D Y++I+GERR RA +A +P + + D+ +
Sbjct: 63 LEELKNSIIENGVIQPVTVCR-DGDGYQLISGERRLRAVTLAGFRFIPAYVIDAHDDSTK 121
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
LE+A++EN+QR+DLN +E AL + L ++ TQ +I VGK+RS V N LR+LKLP
Sbjct: 122 LELALIENIQREDLNAIEVALALKSLTTKCNLTQEEIAQKVGKNRSTVTNFLRLLKLPLQ 181
Query: 182 VREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ IR EIS GHAR L + L + I+++++SVR TEELV E+ K
Sbjct: 182 IQDSIRSREISSGHARALINLPGEQEQLDAWKKIITQQLSVRQTEELVNRMSR--EQSKT 239
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
S E+ L ++E + K+ + I + + KG+ I Y +N+ L + L+
Sbjct: 240 PQSPSSERSSRLAEVESHLREKLVSKVRIVEKKGGKGEIHIPYCSNDDLDRLLELM 295
>gi|153940466|ref|YP_001392994.1| stage 0 sporulation protein J [Clostridium botulinum F str.
Langeland]
gi|152936362|gb|ABS41860.1| stage 0 sporulation protein J [Clostridium botulinum F str.
Langeland]
gi|295320969|gb|ADG01347.1| stage 0 sporulation protein J [Clostridium botulinum F str. 230613]
Length = 282
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 101/292 (34%), Positives = 170/292 (58%), Gaps = 16/292 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E +Q +S + ISI+ I PN PR F+ E +
Sbjct: 3 KKSALGKGLGALIPEKSQE----------NKDSINTISINLIKPNNEQPRKNFDEEKIGY 52
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSIK HGIIQPL+++ N + AGERR+RAAK+ + ++P ++ ++D++S LEI+
Sbjct: 53 LAQSIKEHGIIQPLVLKKEGNLYTIV-AGERRWRAAKLVGIKKIPAVVMDLDDRSVLEIS 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLN +EEA Y+ LI E+ TQ+ + +GKSR+ +AN +R+L L V++
Sbjct: 112 LIENIQRQDLNCIEEAQAYKNLIQEFNITQDVLSIRIGKSRAAIANCMRLLALDKRVQQY 171
Query: 186 IRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ I+ GH R L++ + Q I+ + +SVR+TE +++ +K+ + +
Sbjct: 172 LIDGVITEGHGRALLALKENELQYKLSQTIIDENLSVRETERIIKNIYKEKKNKNNTKD- 230
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E Y D++ K+ S +++++ NKG+ I+Y + + L+ I +L
Sbjct: 231 -IEILPYYKDIKSKLESLFDTKVNLQNNKNKGKIEIEYYSEDDLQRILDILK 281
>gi|329957551|ref|ZP_08298026.1| ParB-like protein [Bacteroides clarus YIT 12056]
gi|328522428|gb|EGF49537.1| ParB-like protein [Bacteroides clarus YIT 12056]
Length = 296
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 163/296 (55%), Gaps = 15/296 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+ S ++ S + I + I NP+ PR F+ L+
Sbjct: 3 QKRNALGRGLDALL--------SMDEVQTEGSSSINEIELSKIAVNPNQPRREFDQTALQ 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI GIIQP+ +R + + Y+IIAGERRFRA+++A L+ +P IR D+++ +E+
Sbjct: 55 ELADSIAEIGIIQPVTLRKLSDDEYQIIAGERRFRASQIAGLTSIPAYIRTADDENVMEM 114
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +E AL Y+ L+ +YG TQ + +GK R+ +AN LR+LKLP+ ++
Sbjct: 115 ALIENIQREDLNSVEIALAYQHLLEQYGLTQERLSERIGKKRTTIANYLRLLKLPAPIQM 174
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIV------SKKMSVRDTEELVQEQDNKKEKRKK 238
++ ++I +GHAR L++ DP ++ V + + + E + K +K
Sbjct: 175 GLQNKQIDMGHARALITLGDPKLQVKIFEEILEQGYSVRKVEEIVKSLNEGETVKSGGRK 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
I + + L++++SS + + KG+ I + E+L+ I +L
Sbjct: 235 IAPKRAKLPEEFNMLKQQLSSFFSTKVQLTCSEKGKGKISIPFGNEEELERIIGIL 290
>gi|170694312|ref|ZP_02885466.1| parB-like partition protein [Burkholderia graminis C4D1M]
gi|170140735|gb|EDT08909.1| parB-like partition protein [Burkholderia graminis C4D1M]
Length = 295
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 102/299 (34%), Positives = 174/299 (58%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + + + + + PR +
Sbjct: 1 MNAVARKKGLGRGLEALLGGSADITEAV-----AIEGAPNVLPLSKMQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR + Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GALQELAASIRAQGVMQPILVRPVSADKYEIIAGERRFRAARLAGLEEVPVLVKDVPDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L +
Sbjct: 116 AAAMALIENIQREDLNPLEEAQGIQRLLDEFDFTHEQAAESVGRSRSAVSNLLRLLNLAT 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K+MSVR+TE+LV K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLANQVVNKRMSVRETEKLVAATTKAAPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
++ LE+++S + + IK R +GQ + + + L+ I L N
Sbjct: 236 RANPDGGRD--TRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILVRLRGN 292
>gi|291547585|emb|CBL20693.1| ParB-like partition proteins [Ruminococcus sp. SR1/5]
Length = 310
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 108/301 (35%), Positives = 179/301 (59%), Gaps = 20/301 (6%)
Query: 9 RLGRGLAALIGEVNQSIDSPEKK-------------TETIPESQDCISIHSIVPNPHNPR 55
LG+GL ALI K + P ++ + I S+ PN + PR
Sbjct: 8 GLGKGLDALIPNKAGGPSKEPAKKTRSAVVKKDKPTEKDNPAAERLVKISSVEPNLNQPR 67
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
+F+ + L +L +SIK +G++QPL+V + ++IIAGERR+RAAKMA L EVPV+++
Sbjct: 68 RHFDEDALLELSESIKQYGVLQPLLV-SDKKDYFEIIAGERRWRAAKMAGLKEVPVVVKE 126
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
++ +EI+++EN+QR+DLNP+EEA+ Y++L+ E+ Q++I V KSR+ V N +R+
Sbjct: 127 FTDQEIVEISLIENIQREDLNPIEEAMAYKRLMEEFHLKQDEIADRVAKSRTAVTNSMRL 186
Query: 176 LKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
LKL S V+EM+ + IS GHAR + + + A + +K+SVR+TE+LV+ +
Sbjct: 187 LKLSSKVQEMVIADMISAGHARALLGISDEALQETTAMKVFDEKLSVRETEKLVKNLVSP 246
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICS 291
+K E + ++ LE+K+ +G +SI+ +NNKG+ I+Y + ++L+ I
Sbjct: 247 AKKV--KTEKNTAEDAIYESLEEKMKGIMGTKVSIQRKKNNKGKIEIEYYSRDELERIID 304
Query: 292 L 292
L
Sbjct: 305 L 305
>gi|258647826|ref|ZP_05735295.1| spoOJ protein [Prevotella tannerae ATCC 51259]
gi|260851645|gb|EEX71514.1| spoOJ protein [Prevotella tannerae ATCC 51259]
Length = 297
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 101/302 (33%), Positives = 175/302 (57%), Gaps = 14/302 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI D E+ + S + +++ I PNP PR+ F++
Sbjct: 1 MAVHKKYPALGRGLDALI-------DRDEEIHTSGSSSINEVAVDQINPNPDQPRHEFDT 53
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L +SIK GI+QP+ +R +++G Y+IIAGERR+RA+K+A L +P +R ++++
Sbjct: 54 AALTELAESIKHIGIVQPITLRQMEDGSYQIIAGERRWRASKLAGLKTIPAYVRTANDEN 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+++A+VEN+QR+DLN +E AL Y++ I +Y +TQ ++ + VGK+R+ VAN LR+LKLP+
Sbjct: 114 MMQMALVENIQREDLNAIEVALAYQKFIEQYSWTQEELSAKVGKNRATVANSLRLLKLPA 173
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+V+ ++ + +S GHAR + S L L + I + SVR EE+V++ +N +
Sbjct: 174 TVQMALQNKTLSQGHARAILGLPEPSLQLKLFKEINEQGYSVRQVEEIVKKINNGETVNS 233
Query: 238 KIFEGSREK---EKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
K +L++ +S + + + KG+ I + +L+ I +L
Sbjct: 234 GRHTIRNRKVGLSPEYNELKESLSKFFQTKVQMTCSQEGKGKITIPFTNERELEHIIALF 293
Query: 294 GE 295
+
Sbjct: 294 DK 295
>gi|304383040|ref|ZP_07365516.1| chromosome partitioning protein SpoOJ [Prevotella marshii DSM
16973]
gi|304335823|gb|EFM02077.1| chromosome partitioning protein SpoOJ [Prevotella marshii DSM
16973]
Length = 297
Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 111/304 (36%), Positives = 167/304 (54%), Gaps = 17/304 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI S E + + I+I I NP+ PR F+
Sbjct: 1 MAVHKKFNALGRGLDALI--------STESVRTQGSSTINEIAIEQIEANPNQPRREFDE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L SI+ GIIQP+ + + + ++IIAGERR+RA+++A L +P IR V +++
Sbjct: 53 EALRELATSIREIGIIQPITLHQVADNKFQIIAGERRWRASQLAGLKSIPAYIRTVSDEN 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A+VEN+QR+DLN +E AL YE L+ + G TQ + VGKSR+ VAN LR+LKLP+
Sbjct: 113 VMEMALVENIQREDLNAIEIALAYEHLMEKSGMTQEKVSGRVGKSRAAVANYLRLLKLPA 172
Query: 181 SVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN--KKEK 235
V+ ++K EI +GHAR L S S + L + I + +VR EE+VQ N +E
Sbjct: 173 QVQMALQKREIDMGHARALLALSSPSLQIQLFKEIQKNQYTVRKVEEIVQRLKNGGDEEV 232
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC---S 291
KK + + L K++S + + + KG+ I + E+L+ I
Sbjct: 233 GKKRIAAKTKLPEEFDLLRKRLSGFLSTKVQMTCSAKGKGKISIPFANEEELEHIMRVFD 292
Query: 292 LLGE 295
L E
Sbjct: 293 KLKE 296
>gi|323357965|ref|YP_004224361.1| transcriptional regulator [Microbacterium testaceum StLB037]
gi|323274336|dbj|BAJ74481.1| predicted transcriptional regulator [Microbacterium testaceum
StLB037]
Length = 323
Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 92/321 (28%), Positives = 153/321 (47%), Gaps = 29/321 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP--------------------------EKKTET 34
M+ + LGRG+ ALI S P +
Sbjct: 1 MA---KRTGLGRGIGALIPTAEASEARPVDVFFPGAPTKAPVAAESDTGATPPADDLVSV 57
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
I SIVPNP PR +F+ E L +L S++ G++QP++VR +G Y++I G
Sbjct: 58 PGARLVHIDPKSIVPNPRQPRTHFDPEDLAELVHSVREFGVLQPVVVRDKGDGTYELIMG 117
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR RA++ A L +P ++R D++ L A++EN+ R LNPLEEA Y+QL+ ++G T
Sbjct: 118 ERRTRASREAGLESIPAVVRETDDEYLLRDALLENLHRSQLNPLEEASAYQQLLEDFGIT 177
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
Q ++ + +G+SR ++N +R+LKLP V++ + +S GHAR ++S DP + ++
Sbjct: 178 QEELATRIGRSRPQISNTIRLLKLPVPVQQRVAAGVLSAGHARAILSLEDPKEMQKLADK 237
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKG 274
+ + + L D+ +++ ++ + + KG
Sbjct: 238 IVNEDLSVRAAEAAAKMPGVSPARQKPKAGSRRSGLDDVAERLGDRLDTKVRVSLTAKKG 297
Query: 275 QFCIKYETNEQLKIICSLLGE 295
Q I + T + L I S LGE
Sbjct: 298 QISIDFATIQDLNRILSALGE 318
>gi|325122005|gb|ADY81528.1| chromosome partitioning protein [Acinetobacter calcoaceticus
PHEA-2]
Length = 292
Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 85/297 (28%), Positives = 161/297 (54%), Gaps = 14/297 (4%)
Query: 1 MSNNYSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS KR L GRGL AL+G + + E + I ++ + + PR +
Sbjct: 1 MS--IKKRGLAKGRGLDALLGSIQKEKLQLEAQA-LDHGQLKQIDVNLLKRGEYQPRRFI 57
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI+ HG++QP+++R +D+ Y+IIAGERR+RAA++A L+E+P I+R++
Sbjct: 58 HEHDLQELASSIEKHGVMQPIVIRPVDDESHPYEIIAGERRWRAAQLAGLTEIPAIVRDL 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+++ ++ +A++EN+QR+DLNP+++A+ ++ E+G + +I + S++ +L +
Sbjct: 118 NDQVAIALALIENIQRQDLNPIDQAIALQRFHDEFGLSHQEIAGKARTTVSNLLRLLSLA 177
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ + ++ A + D L +A++++ K +SVR TE+LV+
Sbjct: 178 DEIKDFMQQGQL-DMGHARAILTLKGKDQLDVAKIVIEKGLSVRQTEQLVR-----DRSE 231
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
K + + L +K+S + G N+ I H KG+ I Y T ++L I ++
Sbjct: 232 PKQEKEKAPVAPDIEQLTQKLSERFGANVKIDHNQKGKGKLVIHYHTLDELDGILNI 288
>gi|300024787|ref|YP_003757398.1| parB-like partition protein [Hyphomicrobium denitrificans ATCC
51888]
gi|299526608|gb|ADJ25077.1| parB-like partition protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 292
Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 117/296 (39%), Positives = 176/296 (59%), Gaps = 8/296 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ K RLGRGLA+LIGE +P Q +SI + +P NPR F
Sbjct: 1 MNSVVPKSRLGRGLASLIGEP-----APLGHRLPPEGEQRMVSIAEVKSSPLNPRKDFRD 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII-AGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L +SI++ G++QP++VR I AGERR+RAA+ A + +PVIIR + ++
Sbjct: 56 EDLAELAESIRTKGLVQPIVVRPNGMAGGYEIVAGERRWRAAQKAGVHTIPVIIRELTDR 115
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+AI+ENVQR+DLN +EEA GY +L+ + Y+Q + I+GKSRSHVAN LR+LKLP
Sbjct: 116 ELLELAIIENVQRQDLNAIEEATGYRELVERFDYSQEQLSEIIGKSRSHVANTLRLLKLP 175
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ V+ ++++ +++ GHAR L+ D LAQ I+S ++VRD E +V ++ I
Sbjct: 176 TGVQSLVQQGQLTAGHARALIGRDDAEVLAQKIISDSLNVRDVEAMVHGLGSETGTAGGI 235
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLG 294
+ R+K+ EK+++ +GL + I K G +KY +QL I LG
Sbjct: 236 RKL-RDKDADTKAFEKELTDLLGLKVEIRKGSGESGTLVVKYGNYDQLDYIRQRLG 290
>gi|322807962|emb|CBZ05537.1| chromosome (plasmid) partitioning protein ParB-2 [Clostridium
botulinum H04402 065]
Length = 282
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 101/292 (34%), Positives = 170/292 (58%), Gaps = 16/292 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E +Q +S + ISI+ I PN PR F+ E +
Sbjct: 3 KKSALGKGLGALIPEKSQE----------NKDSINTISINLIKPNNEQPRKNFDEEKIGY 52
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSIK HGIIQPL+++ N + AGERR+RAAK+ + ++P ++ ++D++S LEI+
Sbjct: 53 LAQSIKEHGIIQPLVLKKEGNLYTIV-AGERRWRAAKLVGIKKIPAVVMDLDDRSVLEIS 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLN +EEA Y+ LI E+ TQ+ + +GKSR+ +AN +R+L L V++
Sbjct: 112 LIENIQRQDLNCIEEAEAYKNLIQEFNITQDVLSIRIGKSRAAIANCMRLLALDKRVQQY 171
Query: 186 IRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ I+ GH R L++ + Q I+ + +SVR+TE +++ +K+ + +
Sbjct: 172 LIDGVITEGHGRALLALKENELQYKLSQTIIDENLSVRETERIIKNIYKEKKNKNNTKD- 230
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E Y D++ K+ S +++++ NKG+ I+Y + + L+ I +L
Sbjct: 231 -IEILPYYKDIKSKLESLFDTKVNLQNNKNKGKIEIEYYSEDDLQRILDILK 281
>gi|161508049|ref|YP_001578016.1| chromosome partitioning protein [Lactobacillus helveticus DPC 4571]
gi|160349038|gb|ABX27712.1| Chromosome partitioning protein [Lactobacillus helveticus DPC 4571]
Length = 294
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 105/293 (35%), Positives = 164/293 (55%), Gaps = 19/293 (6%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRG+ AL + Q ++ E +++ I PNP+ PR F+ + L++
Sbjct: 12 KKGGLGRGIEALFEDEPQIEETEE---------VQELNLSEIRPNPYQPRKRFDDKSLKE 62
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK +G+ QP++VR Y+IIAGERR+RA+K+A +P IIR D +E+A
Sbjct: 63 LSDSIKENGVFQPIVVRK-SVNGYEIIAGERRYRASKLAKKKTIPAIIRKFDESQMMEVA 121
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL PLEEA YE L G TQ ++ +GKSR ++AN LR+L LPS + +
Sbjct: 122 VLENLQREDLTPLEEAQAYEMLQKNLGLTQEEVSKRMGKSRPYIANYLRLLTLPSKTKRL 181
Query: 186 IRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ E+S+G ART L LA+ + + + VR E LV E + KK
Sbjct: 182 LQHGELSMGQARTLLALKDKDKIDGLAKKVAQEGIPVRKVEALVNEMNA-----KKPQNK 236
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
+ +K ++ E ++S+K G +++I + KG I + + E+L I +LG
Sbjct: 237 AIKKSAFIRASENQLSNKFGASVNISETKKGKGHLSIDFTSAEELNRILDMLG 289
>gi|170756741|ref|YP_001783273.1| stage 0 sporulation protein J [Clostridium botulinum B1 str. Okra]
gi|169121953|gb|ACA45789.1| stage 0 sporulation protein J [Clostridium botulinum B1 str. Okra]
Length = 282
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 100/292 (34%), Positives = 171/292 (58%), Gaps = 16/292 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E K++ +S + ISI+ I PN PR F+ E +
Sbjct: 3 KKSALGKGLGALIPE----------KSQENKDSINTISINLIKPNNEQPRKNFDEEKIGY 52
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSIK HGIIQPL+++ N + AGERR+RAAK+ + ++P ++ ++D++S LEI+
Sbjct: 53 LAQSIKEHGIIQPLVLKKEGNLYTIV-AGERRWRAAKLVGIKKIPAVVMDLDDRSVLEIS 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLN +EEA Y+ LI E+ TQ+ + +GKSR+ +AN +R+L L V++
Sbjct: 112 LIENIQRQDLNCIEEAQAYKNLIQEFNITQDVLSIRIGKSRAAIANCMRLLALDKRVQQY 171
Query: 186 IRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ I+ GH R L++ + Q I+ + +SVR+TE +++ +K+ + +
Sbjct: 172 LIDGVITEGHGRALLALKENELQYKLSQTIIDENLSVRETERIIKNIYKEKKNKNNTKD- 230
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ Y D++ K+ S +++++ NKG+ I+Y + + L+ I +L
Sbjct: 231 -IDILPYYKDIKSKLESLFDTKVNLQNNKNKGKIEIEYYSEDDLQRILDILK 281
>gi|226951090|ref|YP_002806181.1| stage 0 sporulation protein J [Clostridium botulinum A2 str. Kyoto]
gi|226841291|gb|ACO83957.1| stage 0 sporulation protein J [Clostridium botulinum A2 str. Kyoto]
Length = 282
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 103/292 (35%), Positives = 169/292 (57%), Gaps = 16/292 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E K + +S + ISI+ I PN PR F+ E +
Sbjct: 3 KKSALGKGLGALIPE----------KPQENKDSINTISINLIKPNNEQPRKNFDEEKIRY 52
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSIK HGIIQPL+++ + AGERR+RAAK+ + ++P ++ ++D++S LEI+
Sbjct: 53 LAQSIKEHGIIQPLVLKKEGKLYTIV-AGERRWRAAKLIGIKKIPAVVMDLDDRSVLEIS 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLN +EEA Y+ LI E+ TQ+ + +GKSR+ +AN +R+L L V++
Sbjct: 112 LIENIQRQDLNCIEEAQAYKNLIQEFKTTQDVLSIRIGKSRAAIANCMRLLALDKRVQQY 171
Query: 186 IRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ I+ GH R L++ + Q I+ + +SVR+TE +++ KEK+ K
Sbjct: 172 LIDGVITEGHGRALLALKENELQYKLSQTIIDENLSVRETERIIKNIY--KEKKNKNNTK 229
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E Y D++ K+ S +++++ NKG+ I+Y + + L+ I +L
Sbjct: 230 DNEILPYYKDIKSKLESLFDTKVNLQNNKNKGKIEIEYYSEDDLQRILDILK 281
>gi|332983453|ref|YP_004464894.1| chromosome segregation DNA-binding protein [Mahella australiensis
50-1 BON]
gi|332701131|gb|AEE98072.1| chromosome segregation DNA-binding protein [Mahella australiensis
50-1 BON]
Length = 281
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 98/291 (33%), Positives = 157/291 (53%), Gaps = 10/291 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
KR LG+GL ALI E D E + I I PN PR F+ L
Sbjct: 1 MPKRALGKGLQALIPESINETDEHE---------IQELRISDIDPNDLQPRKVFDENALS 51
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK +G+IQP+ V+ +D+ + GERR+RAA++A L +P I++ + K LEI
Sbjct: 52 ELAQSIKQYGVIQPITVKPVDDRYMIVT-GERRWRAARIAGLKTIPAIVKEFNTKEILEI 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEA+ + LI ++ TQ ++ + VGKSRS +AN +R+L LP SV++
Sbjct: 111 ALIENLQREDLNPIEEAMALKTLIDDFDLTQEELAARVGKSRSAIANTIRLLNLPQSVQD 170
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
M+ + +S GHAR L+S + S EL + ++ ++ + + ++
Sbjct: 171 MMMEGLLSAGHARALLSVESEELQQNLAKSAVEKGLTVRELEELIKHQNKEHNRSDKRNK 230
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + +S +G ++I KG+ I+Y E L I +L +
Sbjct: 231 DSYIPFQEYADSLSRMLGTKVNIVSGKRKGRIEIEYYDTEDLYRILDVLNK 281
>gi|254487763|ref|ZP_05100968.1| chromosome partitioning protein [Roseobacter sp. GAI101]
gi|214044632|gb|EEB85270.1| chromosome partitioning protein [Roseobacter sp. GAI101]
Length = 278
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 117/272 (43%), Positives = 175/272 (64%), Gaps = 4/272 (1%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + ++ + I I PNP PR F+ E L DL SI+ G+IQPLIVR ++
Sbjct: 5 AETQTVTEKGSAEQYVPIEQISPNPEQPRKRFDPEDLNDLANSIREKGVIQPLIVRRRED 64
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G ++I+AGERR+RA++MA L ++PVIIR + LE+AI+EN+QR DLN +EEA GY Q
Sbjct: 65 GSFEIVAGERRWRASQMAQLHQLPVIIREFTDVEVLEVAIIENIQRADLNSVEEAAGYRQ 124
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
L+ +G+TQ + +GKSRSH+AN+LR+L LP +V EM+RK ++S GHARTLV+ DPL
Sbjct: 125 LMDRFGHTQEKMAEALGKSRSHIANLLRLLNLPETVLEMVRKGDLSAGHARTLVTADDPL 184
Query: 207 SLAQVIVSKKMSVRDTEELVQEQD--NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
LA I++ +SVR E LV++ + + +K+ + EK+ LE +S+ +GL
Sbjct: 185 KLANQIIAGGLSVRAAEALVKKAQAGDAETPVRKVRSSAEEKDADTRALEGDLSANLGLK 244
Query: 265 ISIKHRNNK--GQFCIKYETNEQLKIICSLLG 294
+++ H+ + GQ + Y+T E+L IC LL
Sbjct: 245 VTLNHKPGQEAGQMVLTYKTMEELDEICRLLS 276
>gi|163815002|ref|ZP_02206389.1| hypothetical protein COPEUT_01156 [Coprococcus eutactus ATCC 27759]
gi|158449685|gb|EDP26680.1| hypothetical protein COPEUT_01156 [Coprococcus eutactus ATCC 27759]
Length = 323
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 123/313 (39%), Positives = 180/313 (57%), Gaps = 27/313 (8%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPES---------------------QDCISIH 45
K+ LGRGL L+G + S KKT+ P S + I+I+
Sbjct: 4 KKGLGRGLNDLLGTSDASRSPRSKKTDNDPSSSPEKEVKTVTKEVIKEVVKEVEQKININ 63
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMAS 105
I PN PR F+ E L++L SIK +G+++PLIV + Y+IIAGERR+RAA++A
Sbjct: 64 LIEPNKSQPRKQFDEEALQELSDSIKKYGVLEPLIV-TKKSDYYEIIAGERRWRAARLAG 122
Query: 106 LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKS 165
L E+PV+IR +K +EI+++EN+QR+DLNP+EEA YE LIS+Y Q ++ V KS
Sbjct: 123 LKEIPVVIREYTDKEIMEISLIENIQREDLNPIEEAQAYEALISQYNLKQEEVAERVSKS 182
Query: 166 RSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDT 222
RS + N LR+LKL VR+M+ IS GHAR L+ D A ++ +K+SVR+T
Sbjct: 183 RSTITNSLRLLKLCEDVRQMVMYNMISTGHARALIPIEDPKLQYETAAIVYDQKLSVRET 242
Query: 223 EELVQE-QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKY 280
E V+ K E+ K E ++ + +D+E K+ S +G I+IK NNKG+ I Y
Sbjct: 243 EAYVKSILQAKPEEEKVKKEPDKDLSVFYSDIENKLKSILGAKIAIKASNNNKGKIEINY 302
Query: 281 ETNEQLKIICSLL 293
+ ++L I +L
Sbjct: 303 YSQDELDRITEML 315
>gi|227879185|ref|ZP_03997057.1| stage 0 DNA-binding protein [Lactobacillus crispatus JV-V01]
gi|256849427|ref|ZP_05554859.1| chromosome partitioning protein [Lactobacillus crispatus MV-1A-US]
gi|262046094|ref|ZP_06019057.1| chromosome partitioning protein [Lactobacillus crispatus MV-3A-US]
gi|293380693|ref|ZP_06626742.1| ParB-like partition protein [Lactobacillus crispatus 214-1]
gi|312976916|ref|ZP_07788665.1| stage 0 sporulation protein J [Lactobacillus crispatus CTV-05]
gi|227861188|gb|EEJ68835.1| stage 0 DNA-binding protein [Lactobacillus crispatus JV-V01]
gi|256713543|gb|EEU28532.1| chromosome partitioning protein [Lactobacillus crispatus MV-1A-US]
gi|260573424|gb|EEX29981.1| chromosome partitioning protein [Lactobacillus crispatus MV-3A-US]
gi|290922733|gb|EFD99686.1| ParB-like partition protein [Lactobacillus crispatus 214-1]
gi|310896244|gb|EFQ45309.1| stage 0 sporulation protein J [Lactobacillus crispatus CTV-05]
Length = 295
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 102/290 (35%), Positives = 162/290 (55%), Gaps = 12/290 (4%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRGL AL + Q ++ E + + I PNP+ PR F+ + L++
Sbjct: 12 KKGGLGRGLEALFEDEPQVQEAEE---------VQELDLGDIRPNPYQPRKRFDDKSLKE 62
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK +G+ QP+IVR Y+IIAGERRFRA+K+A +P IIR + +E+A
Sbjct: 63 LSDSIKENGVFQPIIVRE-SVNGYEIIAGERRFRASKLAKKKTIPAIIRKFNESQMMEVA 121
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL PLEEA YE L G TQ ++ +GKSR ++AN LR+L LPS + +
Sbjct: 122 VLENLQREDLTPLEEAQAYEMLQKNLGLTQEEVSKRMGKSRPYIANYLRLLTLPSKTKRL 181
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
++ E+S+G ARTL+S D + + + + V+ N+ +K + + +
Sbjct: 182 LQHGELSMGQARTLLSLKDKEKI-DALAKRVVKEGMPVRKVEAVVNELNAKKPRSKKTAK 240
Query: 246 KEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
K ++ E ++++K G +++I + KG I + + E+L I LLG
Sbjct: 241 KSAFIRASESQLANKFGSSVNISETQKGKGHLSIDFASTEELNRILDLLG 290
>gi|300725889|ref|ZP_07059352.1| spoOJ protein [Prevotella bryantii B14]
gi|299776826|gb|EFI73373.1| spoOJ protein [Prevotella bryantii B14]
Length = 303
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 169/304 (55%), Gaps = 17/304 (5%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ LGRGL ALI S E + + I I I NP+ PR F+ +
Sbjct: 8 NTTAKNNALGRGLDALI--------STENVRTQGSSTINEIPIEQIENNPNQPRREFDQD 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L +L SIK+ GIIQP+ +R + ++IIAGERR+RA+++A L +P IR + ++
Sbjct: 60 ALIELADSIKAIGIIQPITLRQVAENRFQIIAGERRWRASQLAGLKAIPAYIRTISDEGV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L+ TQ + VGKSR+ +AN LR+LKLP+
Sbjct: 120 MEMALVENIQREDLNSIEIALAYEHLLENSNMTQEKVAERVGKSRAAIANYLRLLKLPAQ 179
Query: 182 VREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++K+EI +GHAR L+ S S + L + I SVR EELVQ+ + ++
Sbjct: 180 VQMALQKKEIDMGHARALLALESPSLQIKLFKEIQKNGYSVRKVEELVQQLKSGEDIESG 239
Query: 239 IFE--GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC---SL 292
+ + + L+K++SS + +++ + KG+ I +E+ + L+ +
Sbjct: 240 KKKIVSKTQLPEEFIMLKKRLSSFLNAKVNMTCNAKGKGKISIPFESEDDLERLMNVFDK 299
Query: 293 LGEN 296
L EN
Sbjct: 300 LKEN 303
>gi|256844010|ref|ZP_05549497.1| chromosome partitioning protein [Lactobacillus crispatus 125-2-CHN]
gi|295693712|ref|YP_003602322.1| chromosome partitioning protein parb [Lactobacillus crispatus ST1]
gi|256613915|gb|EEU19117.1| chromosome partitioning protein [Lactobacillus crispatus 125-2-CHN]
gi|295031818|emb|CBL51297.1| Chromosome partitioning protein ParB [Lactobacillus crispatus ST1]
Length = 295
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 107/293 (36%), Positives = 166/293 (56%), Gaps = 18/293 (6%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRGL AL + Q ++ E + + I PNP+ PR F+ + L++
Sbjct: 12 KKGGLGRGLEALFEDEPQVQEAEE---------VQELDLGDIRPNPYQPRKRFDDKSLKE 62
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK +G+ QP+IVR Y+IIAGERRFRA+K+A +P IIR + +E+A
Sbjct: 63 LSDSIKENGVFQPIIVRE-SVNGYEIIAGERRFRASKLAKKKTIPAIIRKFNESQMMEVA 121
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL PLEEA YE L G TQ ++ +GKSR ++AN LR+L LPS + +
Sbjct: 122 VLENLQREDLTPLEEAQAYEMLQKNLGLTQEEVSKRMGKSRPYIANYLRLLTLPSKTKRL 181
Query: 186 IRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ E+S+G ART L +LA+ +V + M VR E +V E + +K +
Sbjct: 182 LQHGELSMGQARTLLSLKDKEKIDALAKRVVKEGMPVRKVEAVVSELNA----KKPRSKK 237
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
+ +K ++ E ++++K G +++I + KG I + + E+L I LLG
Sbjct: 238 TVKKSAFIRASESQLANKFGSSVNISETQKGKGHLSIDFASTEELNRILDLLG 290
>gi|168181105|ref|ZP_02615769.1| stage 0 sporulation protein J [Clostridium botulinum NCTC 2916]
gi|168183716|ref|ZP_02618380.1| stage 0 sporulation protein J [Clostridium botulinum Bf]
gi|237797095|ref|YP_002864647.1| stage 0 sporulation protein J [Clostridium botulinum Ba4 str. 657]
gi|182668063|gb|EDT80042.1| stage 0 sporulation protein J [Clostridium botulinum NCTC 2916]
gi|182673258|gb|EDT85219.1| stage 0 sporulation protein J [Clostridium botulinum Bf]
gi|229260731|gb|ACQ51764.1| stage 0 sporulation protein J [Clostridium botulinum Ba4 str. 657]
Length = 282
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 103/292 (35%), Positives = 169/292 (57%), Gaps = 16/292 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E +Q +S + ISI+ I PN PR F+ E +
Sbjct: 3 KKSALGKGLGALIPEKSQE----------NKDSINTISINLIKPNNEQPRKNFDEEKIRY 52
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSIK HGIIQPL+++ + AGERR+RAAK+ + ++P ++ ++D++S LEI+
Sbjct: 53 LAQSIKEHGIIQPLVLKKEGKLYTIV-AGERRWRAAKLIGIKKIPAVVMDLDDRSVLEIS 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLN +EEA Y+ LI E+ TQ+ + +GKSR+ +AN +R+L L V++
Sbjct: 112 LIENIQRQDLNCIEEAQAYKNLIQEFKTTQDVLSIRIGKSRAAIANCMRLLALDKRVQQY 171
Query: 186 IRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ I+ GH R L++ + Q I+ + +SVR+TE +++ KEK+ K
Sbjct: 172 LIDGVITEGHGRALLALKENELQYKLSQTIIDENLSVRETERIIKNIY--KEKKNKNNTK 229
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E Y D++ K+ S +++++ NKG+ I+Y + + L+ I +L
Sbjct: 230 DNEILPYYKDIKSKLESLFDTKVNLQNNKNKGKIEIEYYSEDDLQRILDILK 281
>gi|145597095|ref|YP_001161392.1| parB-like partition protein [Salinispora tropica CNB-440]
gi|145306432|gb|ABP57014.1| chromosome segregation DNA-binding protein [Salinispora tropica
CNB-440]
Length = 329
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 91/276 (32%), Positives = 156/276 (56%), Gaps = 4/276 (1%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
+ + E + IS+ IVPNP PR F+ E LE+L SI+ G +QP++VR
Sbjct: 46 SPLPASESLSPVPGARFAEISVDVIVPNPKQPRQVFDEEALEELKVSIQEVGFLQPIVVR 105
Query: 83 AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
+D+ ++++ GERR+RAA+ S +P I+R+ + S L A++EN+ R +LNPLEEA
Sbjct: 106 QLDDEKFELVMGERRWRAAQAVGRSSIPAIVRDTRDDSMLRDALLENIHRANLNPLEEAA 165
Query: 143 GYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV-- 200
Y+QL+ E+G T ++ +G+SR ++N +R+L LP+ V+ + +S GHAR L+
Sbjct: 166 AYQQLLDEFGATHEELARRIGRSRPQISNTIRLLNLPAQVQRRVAAGVLSAGHARALLSL 225
Query: 201 -STSDPLSLAQVIVSKKMSVRDTEELVQE-QDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
LA IV++ +SVR TEE+V + +++ S+ LTDL ++S
Sbjct: 226 DDPEAQERLAHRIVAEGLSVRATEEVVALSLSDDTGEKEAPKRRSKPHAPALTDLADRLS 285
Query: 259 SKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + +KG+ I++ + + L+ I ++G
Sbjct: 286 DRFDTRVKVDIGRSKGKITIEFGSVDDLERIVDIIG 321
>gi|117617774|ref|YP_858687.1| chromosome partitioning protein ParB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559181|gb|ABK36129.1| chromosome partitioning protein ParB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 302
Score = 145 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 91/296 (30%), Positives = 164/296 (55%), Gaps = 16/296 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSID--------SPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
KR LG+GL AL+ + + + T + + + + PR
Sbjct: 4 KKRGLGKGLDALLSTSTAARQKQVMSDQRTEQAMAPTNQGELRKLPVEWLQSGKYQPRKD 63
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ LEDL SI++ G+IQP++VR + ++IIAGERR+RA+++A L VP ++++V
Sbjct: 64 MSQDALEDLANSIRAQGVIQPIVVRPLGEHSFEIIAGERRWRASQLARLEVVPCLVKDVP 123
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+++++ IA++EN+QR+DLN +EEA+ ++L++E+ T + VGKSR+ V N+LR+ +
Sbjct: 124 DEAAVAIALIENIQREDLNAIEEAVALQRLLTEFELTHQQVAEAVGKSRTTVTNLLRLNQ 183
Query: 178 LPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L V+ + ++ +GHAR L +S LA+++ K ++VRDTE+LVQ+
Sbjct: 184 LNDDVKRFVEHGDLDMGHARALLALSGQAQSELAKLVAQKGLTVRDTEKLVQKALE---- 239
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC 290
+ ++ LE++IS K+G + ++ + + G+ I YE L +
Sbjct: 240 -PAKAKVEPVRDPQFGYLERQISEKIGNQVQLQPGKQDSGKLVISYENLADLDRVL 294
>gi|260911324|ref|ZP_05917923.1| chromosome partitioning protein SpoOJ [Prevotella sp. oral taxon
472 str. F0295]
gi|260634584|gb|EEX52675.1| chromosome partitioning protein SpoOJ [Prevotella sp. oral taxon
472 str. F0295]
Length = 297
Score = 145 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 17/304 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI S E + + I + I NP+ PR F+
Sbjct: 1 MAVHKKFNALGRGLDALI--------STENVRPQGSSTINEIPLEQIEANPNQPRREFDE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L +L SI GIIQP+ +R + ++IIAGERR+RA+++A L +P IR + ++S
Sbjct: 53 DALRELANSINEIGIIQPITLRQVAENKFQIIAGERRWRASQLAGLQAIPAYIRTIKDES 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A+VEN+QR+DLN +E AL YE L+S G TQ + VGKSR+ + N LR+LKLP+
Sbjct: 113 IMELALVENIQREDLNAIEIALAYEHLLSAEGMTQERVSERVGKSRTAITNYLRLLKLPA 172
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR- 236
V+ ++K+EI +GHAR L++ P + I SVR EEL Q+ N ++ +
Sbjct: 173 QVQMALQKKEIDMGHARALLAIDSPSLQIKLFREIQKHGYSVRKVEELAQKLKNGEDIQS 232
Query: 237 -KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIIC---S 291
KK + + + +++S + + + KG+ I + E+L I
Sbjct: 233 GKKTIATKAPMSEEVNKIRQRLSDCLDAKVQMTCSPKGKGKISIPFANEEELARIMATFD 292
Query: 292 LLGE 295
L E
Sbjct: 293 KLKE 296
>gi|148381575|ref|YP_001256116.1| stage 0 sporulation protein J [Clostridium botulinum A str. ATCC
3502]
gi|153932330|ref|YP_001385952.1| stage 0 sporulation protein J [Clostridium botulinum A str. ATCC
19397]
gi|153936521|ref|YP_001389359.1| stage 0 sporulation protein J [Clostridium botulinum A str. Hall]
gi|148291059|emb|CAL85196.1| stage 0 sporulation protein J [Clostridium botulinum A str. ATCC
3502]
gi|152928374|gb|ABS33874.1| stage 0 sporulation protein J [Clostridium botulinum A str. ATCC
19397]
gi|152932435|gb|ABS37934.1| stage 0 sporulation protein J [Clostridium botulinum A str. Hall]
Length = 282
Score = 145 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 104/292 (35%), Positives = 170/292 (58%), Gaps = 16/292 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E +Q +S + ISI+ I PN PR F+ E +
Sbjct: 3 KKSALGKGLGALIPEKSQE----------NKDSINTISINLIKPNNEQPRKSFDEEKIGY 52
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSIK HGIIQPL+++ N + AGERR+RAAK+ + ++P ++ ++D++S LEI+
Sbjct: 53 LAQSIKEHGIIQPLVLKKEGNLYTIV-AGERRWRAAKLVGIKKIPAVVMDLDDRSVLEIS 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLN +EEA Y+ LI E+ TQ+ + +GKSR+ +AN +R+L L V++
Sbjct: 112 LIENIQRQDLNCIEEAQAYKNLIQEFKITQDVLSIRIGKSRAAIANCMRLLALDKRVQQY 171
Query: 186 IRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ I+ GH R L++ + Q I+ + +SVR+TE +++ KEK+ K
Sbjct: 172 LIDGVITEGHGRALLALKENELQYKLSQTIIDENLSVRETERIIRNIY--KEKKNKNNAK 229
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E Y D++ K+ S +++++ NKG+ I+Y + + L+ I +L
Sbjct: 230 DNEILPYYKDIKSKLESLFDTKVNLQNNKNKGKIEIEYYSEDDLQRILDILK 281
>gi|114332386|ref|YP_748608.1| parB-like partition proteins [Nitrosomonas eutropha C91]
gi|114309400|gb|ABI60643.1| chromosome segregation DNA-binding protein [Nitrosomonas eutropha
C91]
Length = 277
Score = 145 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 101/295 (34%), Positives = 172/295 (58%), Gaps = 22/295 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ + +Q DS +++ + + PR +
Sbjct: 1 MAKP---KGLGRGLDALLADNSQETDS-----------LQNLAVDLLQAGKYQPRTRMDE 46
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L DL +S+K+ G++QP++VR + G Y+IIAGERR+RAA++A L ++P I+R V ++S
Sbjct: 47 ASLHDLAESVKAQGVMQPILVRPLVAGGYEIIAGERRWRAARIAGLEQIPAIVREVPDES 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L ++++EN+QR+DLNPLE A G ++LI E+G T G +G SRS ++N+LR+L L +
Sbjct: 107 ALALSLIENIQREDLNPLEAATGIQRLIEEFGMTHQTAGQALGYSRSAISNLLRLLNLAA 166
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+++I + +I +GH R L + L +A +I+ +++SVR+TE L++
Sbjct: 167 PVQDLIMQGKIDMGHGRALLALEAGKQLEIAHLIMQRQLSVRETENLLKRMSQ-----AS 221
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
++ L L++ IS+++G N+ IK + G I Y + EQL I +
Sbjct: 222 SVRKPSFPDRDLLRLQEDISARLGANVVIKQGKKGAGNVIIHYASLEQLDGILAK 276
>gi|302342509|ref|YP_003807038.1| parB-like partition protein [Desulfarculus baarsii DSM 2075]
gi|301639122|gb|ADK84444.1| parB-like partition protein [Desulfarculus baarsii DSM 2075]
Length = 298
Score = 145 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 150/282 (53%), Gaps = 1/282 (0%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+K+ LGRGLAAL+GE + + + + + PNP+ PR ++ +
Sbjct: 8 KKPAKQALGRGLAALLGEDLAPPTPAGEPMPRPNDRIIDLPLERLEPNPYQPRRLYDQDA 67
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L L SI HG++QPL+VR G Y++IAGERR RA +M VPV++R ++ +L
Sbjct: 68 LRALADSIAEHGVLQPLVVRPAPGG-YQLIAGERRMRACQMLGKDTVPVVVRQATDQQAL 126
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
+A++EN+QR+DLNP+EEA +E+L+ E+ + ++I S VGK RS VAN LR+LKLP+ +
Sbjct: 127 LLALLENLQREDLNPMEEAKAFERLVEEFSLSHDEIASGVGKDRSTVANSLRLLKLPAEL 186
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ I IS GHAR L++ + + V + E +
Sbjct: 187 QQDISDGRISAGHARALLALQNAARMRAVRDQIVAGGLSVRATERLVKKLLEPGQGAPAE 246
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNE 284
+ ++ L ++ + G + IK R KG I + +++
Sbjct: 247 PTPIQLHIDSLADDLARRFGARVQIKRRGKKGSIVIPFASDD 288
>gi|296141900|ref|YP_003649143.1| parB-like partition protein [Tsukamurella paurometabola DSM 20162]
gi|296030034|gb|ADG80804.1| parB-like partition protein [Tsukamurella paurometabola DSM 20162]
Length = 341
Score = 145 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 96/340 (28%), Positives = 164/340 (48%), Gaps = 47/340 (13%)
Query: 1 MSNNYSKRRLGRGLAALIGE--------------------------------------VN 22
M+ K LGRGLAALI
Sbjct: 1 MAT-QKKGGLGRGLAALIPTGPDEGPRLGNAAADVVIGAKPGKQAPSAKGTAAERATGAG 59
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
+ + + ++ +I PNP PR+ F+ E L +L SI+ G++QP++VR
Sbjct: 60 AASPGDAPSDDAVGAVYRELAPSAIQPNPQQPRSVFDEEALAELVHSIREFGLMQPIVVR 119
Query: 83 AIDNGL----YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+ Y+++ GERR+RA++ A L +P I+R + L A++EN+ R LNPL
Sbjct: 120 PLPRPQGEVRYQLVMGERRWRASQEAGLETIPTIVRETADGDMLRDALLENIHRVQLNPL 179
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ E+G T +++ + +G+SR V N +R+L+LP +V+ + +S GHAR
Sbjct: 180 EEAAAYQQLLEEFGVTHDELAARLGRSRPVVTNTIRLLRLPVAVQRRVAAGVLSAGHARA 239
Query: 199 LVS----TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
L++ T +LA I+++ MSVR TEE V + + +E + L D+
Sbjct: 240 LLALEGGTEAQEALAARIIAEGMSVRATEEAVTLANRDGTVVPPAPKRRQEADPGLRDVA 299
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+I+ ++ +++ KG+ ++ + + L+ I LL
Sbjct: 300 DRIADRLDTKVTVSMGKRKGKIVVEVGSADDLERIVGLLS 339
>gi|227834356|ref|YP_002836063.1| chromosome partitioning protein ParB [Corynebacterium aurimucosum
ATCC 700975]
gi|262183088|ref|ZP_06042509.1| chromosome partitioning protein ParB [Corynebacterium aurimucosum
ATCC 700975]
gi|227455372|gb|ACP34125.1| chromosome partitioning protein ParB [Corynebacterium aurimucosum
ATCC 700975]
Length = 351
Score = 145 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 98/349 (28%), Positives = 170/349 (48%), Gaps = 52/349 (14%)
Query: 1 MSNNYS-------KRRLGRGLAALIGEVNQSIDSP------------------------- 28
M++ + + LG+GLAALI +
Sbjct: 1 MADKKAEQKPEQRQGGLGKGLAALIPSGPGAPSRKPRLGDSAADIILGASTGGAHGSAPK 60
Query: 29 -----------------EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
+ K I + IS+ I+PNP PR F+ + L +L SIK
Sbjct: 61 KVQGAPTIQQSSGSKKRQAKPSVIGATYREISVGDIMPNPKQPRTVFDEDDLAELVHSIK 120
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G++QP++VR + G +++I GERR+RA+ A L+ +P I+R+ + L A++EN+
Sbjct: 121 EFGLLQPVVVRPAEEGGFELIMGERRWRASSKAGLATIPAIVRDTKDDDLLRDALLENIH 180
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R LNPLEEA Y+QL+ E+G TQN++ +G+SR V N++R+LKLP SV++ + +
Sbjct: 181 RVQLNPLEEAHAYQQLLEEFGVTQNELADRIGRSRPQVTNMIRLLKLPVSVQKRVAAGTL 240
Query: 192 SLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
S GHAR L +A IV++ +SVR TEE V + + + + + +
Sbjct: 241 SGGHARALLGLPDAEAMELIANRIVAEGLSVRATEEAVTLYKRDGKPAEPTKKPAAPQPQ 300
Query: 249 YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ TD ++++ + +++ KG+ +++ E + I +L+ +
Sbjct: 301 FFTDSAERLADRFDTKVTVTMGKRKGKMVVEFGDQEDFERILALIEGKE 349
>gi|15828464|ref|NP_302727.1| cell division protein [Mycobacterium leprae TN]
gi|221230941|ref|YP_002504357.1| putative cell division protein [Mycobacterium leprae Br4923]
gi|13093894|emb|CAC32238.1| putative cell division protein [Mycobacterium leprae]
gi|219934048|emb|CAR72806.1| putative cell division protein [Mycobacterium leprae Br4923]
Length = 335
Score = 145 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 93/330 (28%), Positives = 159/330 (48%), Gaps = 37/330 (11%)
Query: 1 MSNNY---SKRRLGRGLAALIGEVNQSIDS--------------------PEKKTETIPE 37
MS K LGRGLA+LI DS +K +
Sbjct: 1 MSMTQSLCKKGGLGRGLASLIPTGPVDADSGPATYGPQMGNTAADVLIGGSAQKDNAMGA 60
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIA 93
I++ I NP PR F+ E + +L SI+ G++QP++VR + Y+I+
Sbjct: 61 VYREIALSDITENPCQPRQVFDDEAMSELVHSIREFGLLQPIVVRPASGSCGDTRYQIVM 120
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAA+ A LS +P I+R + S L A++EN+ R LNPLEEA Y+QL+ E+
Sbjct: 121 GERRWRAAQQAGLSFIPAIVRATGDDSMLRDALLENIHRVQLNPLEEAAAYQQLLDEFEV 180
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
T +++ S +G+SR + N++R+LKLP V+ + +S GHAR L+S + + +
Sbjct: 181 THDELASRIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEANPEVQEELA 240
Query: 214 SK-------KMSVRDTEELVQEQDNKKEKRKKIFEGSREKE---KYLTDLEKKISSKVGL 263
S+ + + +L + N+ + R K L D+ +++S+
Sbjct: 241 SRIIAEGLSVRATEEAVKLANHEVNRVNREVITPVPQRRKPICMPGLQDVAERLSNAFDT 300
Query: 264 NISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + KG+ +++ + + L+ I ++
Sbjct: 301 RVMVSLGKRKGKIVVEFSSVDDLQRIVDVM 330
>gi|329961922|ref|ZP_08299935.1| putative stage 0 sporulation protein J [Bacteroides fluxus YIT
12057]
gi|328531145|gb|EGF57995.1| putative stage 0 sporulation protein J [Bacteroides fluxus YIT
12057]
Length = 294
Score = 145 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 97/294 (32%), Positives = 159/294 (54%), Gaps = 15/294 (5%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
+ LGRGL AL S ++ S + I + I+ NP+ PR F+ L++L
Sbjct: 4 RNALGRGLDALF--------SMDEVRTEGSSSINEIELSKIIVNPNQPRREFDQTALQEL 55
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SI GIIQP+ +R +DN Y+IIAGERRFRA+++A L+ +P IR D+++ +E+A+
Sbjct: 56 ADSIAEIGIIQPITLRKLDNEEYQIIAGERRFRASQLAGLTSIPAYIRTADDENVMEMAL 115
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLN +E AL Y+ L+ +YG TQ + VGK R+ +AN LR+LKLP+ V+ +
Sbjct: 116 IENIQREDLNSVEIALAYQHLLEQYGLTQERLSERVGKKRTTIANYLRLLKLPAPVQMGL 175
Query: 187 RKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ ++I +GHAR LV+ V + + + E + K +KI
Sbjct: 176 QNKQIDMGHARALVTLGDPKLQVKIYEEILEHGYSVRKVEEIVKSLSEGETVKSGSRKIA 235
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ + L++++S + + KG+ I + E+L+ I +L
Sbjct: 236 PKRAKLPEEFNMLKQQLSGFFNTKVQLTCSEKGKGKISIPFSNEEELERIIGIL 289
>gi|295678141|ref|YP_003606665.1| parB-like partition protein [Burkholderia sp. CCGE1002]
gi|295437984|gb|ADG17154.1| parB-like partition protein [Burkholderia sp. CCGE1002]
Length = 295
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 102/299 (34%), Positives = 175/299 (58%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + + + + + PR +
Sbjct: 1 MNAVARKKGLGRGLEALLGGTADITEAA-----VIDGAPNVLPLGKMQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GALQELAASIRAQGLMQPILVRPIAADRYEIIAGERRFRAARLAGLDEVPVLVKDVPDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L +
Sbjct: 116 AAAMALIENIQREDLNPLEEAQGIQRLLDEFNFTHEQAAESVGRSRSAVSNLLRLLNLAT 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K++SVR+TE+LV K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLANQVVNKRLSVRETEKLVAM--TMKVTPAA 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ + + LE+++S + + IK R +GQ + + + L+ I L N
Sbjct: 234 KARANPDGGRDTRRLEEELSDLLSATVKIKLGRRGRGQVLVDFGNLDALEGILVRLRGN 292
>gi|83594957|ref|YP_428709.1| chromosome segregation DNA-binding protein [Rhodospirillum rubrum
ATCC 11170]
gi|83577871|gb|ABC24422.1| chromosome segregation DNA-binding protein [Rhodospirillum rubrum
ATCC 11170]
Length = 326
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 111/287 (38%), Positives = 179/287 (62%), Gaps = 8/287 (2%)
Query: 15 AALIGEVNQSIDSPEKKTET-----IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQS 69
+AL+G+ E + + + ++VPNP PR +F+ E + DL +S
Sbjct: 19 SALLGDDPNDTVVQESAAAAAAAVASGRAIQVLPVGALVPNPDQPRRHFDEEAIADLTES 78
Query: 70 IKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
I++ GI+ P++ R N ++IIAGERR+RAA+ A L EVPV++R+ ++ +LE+A++
Sbjct: 79 IRAKGILSPILARPDPNQPGTFQIIAGERRWRAAQRAQLHEVPVLVRSFSDQETLEVALI 138
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA GY +L+ ++ +TQ D+ +VGKSRSHVAN +R+L+LP VREM+
Sbjct: 139 ENLQRQDLSPLEEAEGYRRLLEDFAHTQEDLAKVVGKSRSHVANTMRLLQLPDDVREMVE 198
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR-EK 246
K +S GHAR L++T LA+++VS+ ++VR TE+LVQ+ K ++ + +K
Sbjct: 199 KGALSAGHARALLTTEAISDLARLVVSRGLNVRQTEKLVQQAAAAANKPRRPATAAPTDK 258
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ LE+ IS+ +GL + I + G+ I Y++ QL I L
Sbjct: 259 DADTLALERDISNVLGLAVEISAKARGGRLTIDYDSLSQLDDILHRL 305
>gi|81427633|ref|YP_394630.1| chromosome partitioning protein, DNA-binding exonuclease
[Lactobacillus sakei subsp. sakei 23K]
gi|78609272|emb|CAI54319.1| Chromosome partitioning protein, DNA-binding exonuclease
[Lactobacillus sakei subsp. sakei 23K]
Length = 291
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 96/294 (32%), Positives = 159/294 (54%), Gaps = 8/294 (2%)
Query: 4 NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
N + + LGRGL A+ E + +++ I PNP+ PR F+ L
Sbjct: 3 NKNGKGLGRGLEAVFSAFEGP------NKNRADELVEELALEDIRPNPYQPRKTFDEAAL 56
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
+L SIK G+ QP+IVR Y++IAGERRFRA+K+A + +P I R D ++ +E
Sbjct: 57 AELAASIKKSGVFQPIIVRK-SINGYELIAGERRFRASKLAGKTTIPAITRQFDEEAMME 115
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR+DL PLEEA Y+ L+ + TQ ++ +GKSR ++AN LR+L LP+ V+
Sbjct: 116 IAVLENLQREDLTPLEEAQAYDTLLKKLNLTQAEVSERLGKSRPYIANYLRLLGLPADVK 175
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+++++ ++S+G ARTL+S ++ + +L Q + + + +
Sbjct: 176 QLLQEGQLSMGQARTLLSLKKKSQISALAKRTIAESLTVRQLEQLVNQMNQTKAAKVAKT 235
Query: 244 REKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ K Y+ E ++ K ++I + +G+ I Y T E L I +LL N
Sbjct: 236 KIKSPYIQASENQLVDKFDTKVNIAMNSKGRGKIEIDYGTVEDLNRILALLDVN 289
>gi|299065189|emb|CBJ36355.1| chromosome partitioning protein ParB [Ralstonia solanacearum CMR15]
Length = 303
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 100/300 (33%), Positives = 185/300 (61%), Gaps = 14/300 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + ++ ++ + + + + P + PR +
Sbjct: 1 MST-LKKKGLGRGLEALLGSPAEIVEVAKQD-----GAPTVLKLDQMQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN----GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI++ G++QP++VR +D+ Y+IIAGERRFRA+++A L+EVPV++++V
Sbjct: 55 GALQELAASIRAQGLMQPILVRKVDSDGAAQKYEIIAGERRFRASRLAGLTEVPVLVKDV 114
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++++ +A++EN+QR+DLNPLEEA G +LI E+ +T +G+SRS V+N+LR+L
Sbjct: 115 PDQAAAAMALIENIQREDLNPLEEAQGIARLIREFQFTHEQAAESLGRSRSAVSNLLRLL 174
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ M+ ++ +GHARTL V + ++LA I++K++SVR+TE+LV E
Sbjct: 175 NLAQPVQTMLMAGDLDMGHARTLLAVDGASQITLANQIINKRLSVRETEKLVASTLKPFE 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + + + + + LE++++ +GL++ IK +GQ +++ + ++ + + L
Sbjct: 235 LKSQRQKHGQNG-RDVARLEEELADLLGLSVQIKLAAKGRGQLTVQFSSLDEFDGLLARL 293
>gi|194291174|ref|YP_002007081.1| exonuclease involved in chromosome partitioning, parb protein
[Cupriavidus taiwanensis LMG 19424]
gi|193225009|emb|CAQ71020.1| exonuclease involved in chromosome partitioning, PARB protein
[Cupriavidus taiwanensis LMG 19424]
Length = 300
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 106/300 (35%), Positives = 189/300 (63%), Gaps = 11/300 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + ++S +++ + ++++ + P + PR +
Sbjct: 1 MSTA-KKKGLGRGLEALLGGPAEIVESVKQE-----GAPTVLNLNQLQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L SI++ G++QP++VR + + Y+IIAGERRFRA+++A L +VPV++++V ++
Sbjct: 55 GALQELAASIRAQGLMQPILVRRVAEPDRYEIIAGERRFRASRLAGLDKVPVLVKDVADE 114
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++ +A++EN+QR+DLNPLEEA G +LI E+ +T VG+SRS V+N+LR+L L
Sbjct: 115 AAAAMALIENIQREDLNPLEEAQGIMRLIREFRFTHEQAAESVGRSRSAVSNLLRLLNLA 174
Query: 180 SSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ V+ M+ ++ +GHAR L V ++ ++LA IV+K++SVR+TE+LV + +
Sbjct: 175 APVQTMLMAGDLDMGHARALLAVDGANQITLANQIVNKRLSVRETEKLVASTLKPFDLKS 234
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGEN 296
+G+ + + LE+++S +GL + IK KGQ I + N+ L+ + + L E+
Sbjct: 235 LKQKGANNV-RDVARLEEELSDALGLAVQIKLSARGKGQLTIHFSNNDALEGVLTRLRES 293
>gi|311109646|ref|YP_003982499.1| parB-like partition protein domain-containing protein
[Achromobacter xylosoxidans A8]
gi|310764335|gb|ADP19784.1| parB-like partition protein domain protein [Achromobacter
xylosoxidans A8]
Length = 308
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 103/300 (34%), Positives = 172/300 (57%), Gaps = 9/300 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDS--PEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ K LGRGL AL+G +I++ + + + + PR
Sbjct: 1 MATKKPK-GLGRGLDALLGADAPAIENIGKAAAAAKPEGPPSTLPVSKMRAGKYQPRTRM 59
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAID---NGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
+ L +L +SI++ GI+QP++VRA+ G Y+IIAGERRFRAA++A L EVPV++R
Sbjct: 60 DEGALGELAESIRTQGIMQPILVRALGEAAPGHYEIIAGERRFRAAQLAGLKEVPVLVRE 119
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
V ++++ +A++EN+QR+DLNPLEEA G +L+ E+G T +G+SRS +N+LR+
Sbjct: 120 VADENAAVMALIENIQREDLNPLEEAQGVRRLLDEFGLTHEQAAQAIGRSRSATSNLLRL 179
Query: 176 LKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
L L ++V+ M+ ++ +GHAR L V + + LA I+++++SVR+ E+LV + +
Sbjct: 180 LNLAAAVQTMLLAGDVDMGHARALLAVDAATQIQLANQIIARRLSVREAEKLVAKTAKEA 239
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
E + + + LT LE+ +S +G +++K KGQ I + E L +
Sbjct: 240 ESSNAPRKKANGASRDLTRLEEALSDHLGTRVALKVGAKEKGQIVIDFHGWEHLNSLLER 299
>gi|332880037|ref|ZP_08447721.1| putative stage 0 sporulation protein J [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332682033|gb|EGJ54946.1| putative stage 0 sporulation protein J [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 310
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 108/310 (34%), Positives = 163/310 (52%), Gaps = 12/310 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP--EKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ K+ LGRG++A+ G ++ S +K + I + + + I NP PR F
Sbjct: 1 MTKPAKKQSLGRGISAIFGNSPEATISSINDKNADKIVGNIIELELDLIETNPFQPRTSF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRA-IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L+ L SI+ G++QP+ VR + Y++I+GERRFRA+K+A L +P IR D
Sbjct: 61 NEEELQGLASSIEELGVVQPITVRKLEEGNKYQLISGERRFRASKLAGLKTIPAYIRIAD 120
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ SL +A+VEN+QR+DL+P+E AL Y+QLI + TQ+ + VGK RS + N LR+LK
Sbjct: 121 DNDSLTMALVENIQRQDLDPIEIALSYQQLIEQVNLTQDQMSKRVGKKRSTITNYLRLLK 180
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKE 234
L V+ IR IS+GH R ++ +P A+V +SVRDTEELV+ N +
Sbjct: 181 LAPIVQTGIRDGFISMGHGRAIIPIENPEQQAEVYERIIADNLSVRDTEELVRRIQNPET 240
Query: 235 KRK-----KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKI 288
E Y+ + + G +++K KG I + + E K
Sbjct: 241 TEVASVSLPKNSSKTEVPSYIKEHISTFNHFFGTKVAVKMSKDGKGSLTIPFNSEEDFKR 300
Query: 289 ICSLLGENDF 298
I LL + D
Sbjct: 301 IQRLLDKKDE 310
>gi|148284584|ref|YP_001248674.1| chromosome partitioning protein [Orientia tsutsugamushi str.
Boryong]
gi|146740023|emb|CAM80107.1| chromosome partitioning protein [Orientia tsutsugamushi str.
Boryong]
Length = 293
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 111/293 (37%), Positives = 181/293 (61%), Gaps = 8/293 (2%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
R LGRGL+AL+ + S S + + S ++I+ + NP+ PR F+ + L +
Sbjct: 5 KTRGLGRGLSALLNDNISSSSSTISQND----SVSILNINQLTVNPYQPRKSFDHDSLVE 60
Query: 66 LCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L +SI HGIIQP+IV D Y IIAGERR+RAAK+A+L EVPV+IR++DN L++
Sbjct: 61 LSESILVHGIIQPIIVNKTEDQSKYIIIAGERRWRAAKIANLIEVPVVIRDIDNDQVLQV 120
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+ LN +EEA GY +LI E+ +TQ+ + I+GKSRSH+AN+LR+ LP V++
Sbjct: 121 ALIENIQRQKLNIIEEAEGYLKLIEEFNFTQDSLSKILGKSRSHIANVLRLNSLPIPVKD 180
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ + +I++GHARTL+ D + +A+ I+ + ++VR TE+ +++ N + K
Sbjct: 181 SLIQGKITMGHARTLIGHEDAIKIAETIIKQNLNVRQTEKYIKKLTNPNKLDKYNHVIKY 240
Query: 245 EKEKYLTDLE---KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
L +L + +S ++ + I++ N+ G+ I + E+L I S +
Sbjct: 241 STSSELDELSILTQNLSQRLNTKVFIENSNHGGKITIFFSNLEKLDNILSRIK 293
>gi|291278560|ref|YP_003495395.1| chromosome partitioning protein ParB [Deferribacter desulfuricans
SSM1]
gi|290753262|dbj|BAI79639.1| chromosome partitioning protein ParB [Deferribacter desulfuricans
SSM1]
Length = 285
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 108/293 (36%), Positives = 167/293 (56%), Gaps = 17/293 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL +LI + I I +I NP+ PR F+ E L
Sbjct: 2 TKRNPLGRGLESLIPTSKD---------REAGKKVIEIDITNIQANPNQPRKNFDKESLN 52
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLE 123
+L +SIK G++QP++V I + IIAGERR+RAA +A + ++P I I D+K LE
Sbjct: 53 NLAESIKKKGVLQPILVEKISQNSFMIIAGERRWRAAGLAGIKKIPAIVIDKQDDKERLE 112
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
I ++ENVQR+ LNP+E A Y++L+ +YGYTQ + SIVGKSRS VAN LR+L L
Sbjct: 113 IGLIENVQRESLNPVELAEAYKKLMDKYGYTQEQVASIVGKSRSAVANTLRLLALDEKSL 172
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQ---VIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ +++ IS GHAR L+ D S + I+ K++SVR+ E+LV + + +
Sbjct: 173 KALKEGLISEGHARCLLVIDDLQSRLRVLKDIIDKELSVREAEKLVSKLKS----KPAET 228
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ S EK+ +++ LE+++ S + I+ + G IK+ +N+ L I ++L
Sbjct: 229 KKSIEKDLFISTLEEELESYFETKVDIQLKKKGGSIVIKFNSNDDLNRIINVL 281
>gi|300859521|ref|YP_003784504.1| chromosome partitioning protein [Corynebacterium pseudotuberculosis
FRC41]
gi|300686975|gb|ADK29897.1| chromosome partitioning protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302331765|gb|ADL21959.1| Chromosome partitioning protein ParB [Corynebacterium
pseudotuberculosis 1002]
gi|308277457|gb|ADO27356.1| Chromosome partitioning protein ParB [Corynebacterium
pseudotuberculosis I19]
Length = 350
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 95/349 (27%), Positives = 157/349 (44%), Gaps = 51/349 (14%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDS--------------------------------- 27
M+ K LGRG+ ALI
Sbjct: 1 MAQETRKGGLGRGIGALITGSPAPGQRIGASAADVVFGGAAEKKKQSHSPRDAKGARISP 60
Query: 28 ---------------PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
+++ E + I I I+PN NPR+ F+ E L +L SI+
Sbjct: 61 IIAQAVEKQSAGSRGADQQLEEFGATYREIPIGLIIPNEKNPRSVFDEEDLAELVHSIRE 120
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G++QP++VR + Y+II GERR+RA+ A L +P I+R D+ L A++EN+ R
Sbjct: 121 FGLLQPIVVREAADDRYEIIMGERRWRASSKAGLKTIPAIVRKTDDSEMLRDALLENIHR 180
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
LNPLEEA Y+QL+ E+G TQN++ +G+SR + N++R+L LP +V+ + +S
Sbjct: 181 VQLNPLEEAAAYQQLLQEFGVTQNELADKLGRSRPVITNMIRLLALPVAVQRKVAAGVLS 240
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK---Y 249
GHAR L+ + + + ++ + +E + +K REK +
Sbjct: 241 AGHARALLGVKGGEAPQVALADRIVAEGLSVRATEEAVTLMNRGEKPAPKKREKAPTPEF 300
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
LT+ +++ + +S+ KG+ +++ E I LLG N
Sbjct: 301 LTNAANRLADGLDTKVSVSMGKRKGKIVVEFGGREDFDRIMGLLGGNSE 349
>gi|229491225|ref|ZP_04385053.1| ParB-like partition protein [Rhodococcus erythropolis SK121]
gi|229321963|gb|EEN87756.1| ParB-like partition protein [Rhodococcus erythropolis SK121]
Length = 346
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 100/342 (29%), Positives = 161/342 (47%), Gaps = 51/342 (14%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI----------------------------------- 25
MS K LGRGLAALI +
Sbjct: 1 MSQA-RKGGLGRGLAALIPTGPATAPGLGSAAADVVIGVDKRNPSPPPPTKAAPKTPKAT 59
Query: 26 ----------DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
PE + E I I NP PR+ F+ E L +L SI+ G+
Sbjct: 60 KASAAKAPVEAEPETELEPTGAVYLEIEPSLIETNPKQPRSVFDEEALAELVHSIREFGL 119
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
+QP++VR + Y+++ GERR+RA++ A L ++P IIR D+ S L A++EN+ R L
Sbjct: 120 MQPIVVRRHGDK-YQLVMGERRWRASQEAGLEKIPAIIRETDDDSMLRDALLENIHRVQL 178
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
NPLEEA Y+QL+ E+ T ++ + +G+SR V N++R+LKLP +V+ + +S GH
Sbjct: 179 NPLEEAAAYQQLLEEFEVTHEELANRIGRSRPVVTNMIRLLKLPVAVQRRVAAGVLSAGH 238
Query: 196 ARTLVS----TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
AR L+S +A IV++ MSVR TEE V + + + L
Sbjct: 239 ARALLSLEAGADAQEVMAARIVAEGMSVRATEEAVTLANRADNEIAPPQKRKPIVMPGLQ 298
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
D+ +++S +++ KG+ +++ + + L+ I ++
Sbjct: 299 DVAERLSDSFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVGMM 340
>gi|153854267|ref|ZP_01995566.1| hypothetical protein DORLON_01560 [Dorea longicatena DSM 13814]
gi|149753042|gb|EDM62973.1| hypothetical protein DORLON_01560 [Dorea longicatena DSM 13814]
Length = 304
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 109/298 (36%), Positives = 174/298 (58%), Gaps = 14/298 (4%)
Query: 6 SKRRLGRGLAALIGE------VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
K+ LG+GL +LI + V K+ + I+ + PN PR F+
Sbjct: 4 KKKGLGKGLDSLIPDNKSMKSVTSEKTVESKEDAAAKSGVQVMKINEVEPNRDQPRKNFD 63
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ L +L SIK G++QPL+VR Y+IIAGERR+RAAK+A + EVPVI + ++
Sbjct: 64 EDALLELSDSIKQFGVLQPLLVRKRK-DYYEIIAGERRWRAAKLAGVKEVPVIEKEYTDQ 122
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LEI ++EN+QR++LNP+EEA+ Y++L+ E+ Q+++ V KSR+ V N +R+LKL
Sbjct: 123 EILEIGLIENIQRENLNPIEEAIAYKRLLEEFNLKQDEVAERVSKSRTAVTNSMRLLKLS 182
Query: 180 SSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V++MI + IS GHAR L+ +LA I +K+SVR+TE+LV+E N K+ +
Sbjct: 183 DKVQQMIIDDMISTGHARALLAIDDPELQYTLANKIFDEKLSVRETEKLVKEIKNPKKPK 242
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+K + DLE+K+ S G +SI KG+ I+Y ++++L+ + ++
Sbjct: 243 EKKPVAN---SFIYQDLEEKMKSVFGTKVSIASKGKGKGKIEIEYYSDDELEHLFDMM 297
>gi|302381487|ref|YP_003817310.1| parB-like partition protein [Brevundimonas subvibrioides ATCC
15264]
gi|302192115|gb|ADK99686.1| parB-like partition protein [Brevundimonas subvibrioides ATCC
15264]
Length = 283
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 106/282 (37%), Positives = 159/282 (56%), Gaps = 4/282 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+GE P +P I S+ PNP PR F L++L SI+ G++Q
Sbjct: 1 MGEPVAETPVPVSGGRPLPGGVQMAPIESLKPNPDQPRKIFAQADLDELAASIRDKGVLQ 60
Query: 78 PLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
P++VR ++IIAGERR+RA++ A L+EVP+++R +D+ E+AI+ENVQR DL
Sbjct: 61 PILVRTQPGEDGVWQIIAGERRWRASQAARLTEVPIVVREMDDIEVFEVAIIENVQRTDL 120
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
NPLEEA Y L+ +G TQ+ + IVGKSRSHVAN LR+L+LP V + +R+ +S GH
Sbjct: 121 NPLEEADAYRLLMERFGRTQDAVAGIVGKSRSHVANTLRLLQLPEEVLDFVRRGLLSAGH 180
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF--EGSREKEKYLTDL 253
AR L++ DP +LA + ++VR TE L + + GS L
Sbjct: 181 ARALITAPDPGALAAQVERDGLNVRQTEALARRAAQGPATARPRAGGTGSAPASPDTAAL 240
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
E+ ++ +GL +++ R KG+ + Y + EQL +C L +
Sbjct: 241 EQDLADALGLKVALADRGGKGELTLSYASLEQLDDLCRRLMK 282
>gi|260103053|ref|ZP_05753290.1| chromosome partitioning protein Spo0J [Lactobacillus helveticus DSM
20075]
gi|260083143|gb|EEW67263.1| chromosome partitioning protein Spo0J [Lactobacillus helveticus DSM
20075]
Length = 294
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 103/293 (35%), Positives = 163/293 (55%), Gaps = 19/293 (6%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRG+ AL + Q ++ E +++ I PNP+ PR F+ + L++
Sbjct: 12 KKGGLGRGIEALFEDEPQIEETEE---------VQELNLSEIRPNPYQPRKRFDDKSLKE 62
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK +G+ QP++VR Y+IIAGERR+RA+K+A +P I+R D +E+A
Sbjct: 63 LSDSIKENGVFQPIVVRK-SVNGYEIIAGERRYRASKLAKKKIIPAIVRKFDESQMMEVA 121
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL PLEEA YE L TQ +I +GKSR ++AN LR+L LPS + +
Sbjct: 122 VLENLQREDLTPLEEAQAYEMLQKNLSLTQEEISKRMGKSRPYIANYLRLLTLPSKTKRL 181
Query: 186 IRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ E+S+G ART L LA+ + + + VR E LV + + KK
Sbjct: 182 LQHGELSMGQARTLLALKDKDKIDGLAKKVAQEGIPVRKVEALVNKMNA-----KKPQNK 236
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
+ +K ++ E ++S+K G +++I + KG I + + E+L I +LG
Sbjct: 237 AIKKSAFIRASENQLSNKFGASVNISETKKGKGHLSIDFTSAEELNRILDMLG 289
>gi|77920728|ref|YP_358543.1| partition protein ParB-like [Pelobacter carbinolicus DSM 2380]
gi|77546811|gb|ABA90373.1| chromosome segregation DNA-binding protein [Pelobacter carbinolicus
DSM 2380]
Length = 284
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 21/298 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LG+G+ AL+ + + I + P + PR F+
Sbjct: 1 MA---KRPALGKGIGALL----------DPSIKEESHRFFFCPIEELQPLKNQPRKVFDD 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L +L SIK GIIQPL+VR + Y+IIAGERR+RAA+ A L +VPV+I+ +
Sbjct: 48 QKLAELEASIKVRGIIQPLVVRRLS-DHYQIIAGERRWRAAQRAGLKKVPVLIQEATEDA 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++E+A++EN+QR++LNP+EEA Y+ LI + TQ D+ VGK RS V N LR+L+LP
Sbjct: 107 AIEMALIENIQRENLNPIEEAAAYQSLIQAFSLTQEDVAGRVGKDRSTVTNSLRLLRLPD 166
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK----KMSVRDTEELVQEQDNKKEKR 236
VRE + +++GHAR L+S + + ++SVR+TE LV+
Sbjct: 167 RVREDLSAGSLTMGHARALLSLESVPLQLLKVRDQVLAKRLSVRETEALVKRTKKLAMSP 226
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + + LE + +G + I + G+ I Y + + L + LG
Sbjct: 227 PPPPKKT---DPNMQALEDNLKQSLGTKVKIVSKKKGGKIEISYFSADDLDRLLERLG 281
>gi|315039145|ref|YP_004032713.1| Chromosome partitioning protein ParB [Lactobacillus amylovorus GRL
1112]
gi|325957616|ref|YP_004293028.1| Chromosome partitioning protein ParB [Lactobacillus acidophilus
30SC]
gi|312277278|gb|ADQ59918.1| Chromosome partitioning protein ParB [Lactobacillus amylovorus GRL
1112]
gi|325334181|gb|ADZ08089.1| Chromosome partitioning protein ParB [Lactobacillus acidophilus
30SC]
gi|327184261|gb|AEA32708.1| Chromosome partitioning protein ParB [Lactobacillus amylovorus GRL
1118]
Length = 294
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 105/293 (35%), Positives = 163/293 (55%), Gaps = 19/293 (6%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRG+ AL + Q + E + + I PNP+ PR F+ + L +
Sbjct: 12 KKGGLGRGIEALFEDEPQIEEIEE---------VKELDLSDIRPNPYQPRKRFDDKSLRE 62
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK +G+ QP+IVR Y+IIAGERR+RA+K+A +P I+R D +E+A
Sbjct: 63 LSDSIKENGVFQPIIVRK-SVNGYEIIAGERRYRASKLAKKKTIPAIVRKFDESQMMEVA 121
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL PLEEA YE L G TQ ++ +GKSR ++AN LR+L LPS + +
Sbjct: 122 VLENLQREDLTPLEEAQAYEMLQKNLGLTQEEVSKRMGKSRPYIANYLRLLTLPSKTKRL 181
Query: 186 IRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ ++S+G ART L +LA+ + + M VR E LV E + KK +
Sbjct: 182 LQHGDLSMGQARTLLGLKDKDKIDALAKRVAKEGMPVRKVEALVSEMNA-----KKPQKK 236
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLG 294
+ +K ++ E ++S+K G +++I + KG I + + ++L I LLG
Sbjct: 237 TVKKSAFIRASENQLSNKFGSSVNISETKKGKGHLSIDFASADELNRILDLLG 289
>gi|331268199|ref|YP_004394691.1| parB-like partition protein [Clostridium botulinum BKT015925]
gi|329124749|gb|AEB74694.1| parB-like partition protein [Clostridium botulinum BKT015925]
Length = 283
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 106/292 (36%), Positives = 169/292 (57%), Gaps = 16/292 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E N + ES I ++ I PN + PR F+ E +
Sbjct: 4 KKFGLGKGLGALIPEENTESN----------ESVLKIKMNLIKPNSNQPRKSFDEEKILQ 53
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK HG+IQP+I++ N +Y IIAGERR+RAAK L EVP ++ + +K LE++
Sbjct: 54 LAESIKEHGVIQPVILQK-SNEVYTIIAGERRWRAAKKVGLQEVPAVVVELSDKEILEVS 112
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEAL Y++LI E+ TQ+ +G +GKSR+ + N +R+L L S +E
Sbjct: 113 LIENIQREDLNPIEEALAYKKLIDEFNLTQDALGKRIGKSRTAITNCMRLLNLGSRTQEY 172
Query: 186 IRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ IS GH R L++ +AQ I+ K++SVR TE L++ ++ ++
Sbjct: 173 LIDGVISEGHGRVLLAIESEELQYKIAQEIIDKQLSVRQTEILIKNIKKGVKENQEEKLD 232
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + Y D+ K+ + + + + N+G+ I+Y + E L+ I +L
Sbjct: 233 NIK--PYYKDITNKLQNLFNTKVVLSSKGNRGKIQIEYYSEEDLQRIIDVLK 282
>gi|326336090|ref|ZP_08202262.1| chromosome partitioning protein SpoOJ [Capnocytophaga sp. oral
taxon 338 str. F0234]
gi|325691599|gb|EGD33566.1| chromosome partitioning protein SpoOJ [Capnocytophaga sp. oral
taxon 338 str. F0234]
Length = 300
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 166/297 (55%), Gaps = 5/297 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +RLGRGL AL+ + + + + + + + + NP+ PR F
Sbjct: 1 MGKVNKGQRLGRGLGALLP-TEDIQSASDTNADKLIGNILELPLDQVTENPYQPRTVFNE 59
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L SI+ G+IQP+ VR I Y++I+GERR RA+K+A L+ +P IR +++
Sbjct: 60 ETLNELASSIRELGVIQPITVRKIAAQKYELISGERRLRASKLAGLTSIPAFIRIANDEE 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
SL +A+VEN+QR+DL+P+E AL Y ++I E TQ + VGK RS + N LR+LKL
Sbjct: 120 SLMMALVENIQRQDLDPIEVALSYNRMIEELSLTQEQMSDRVGKKRSTITNYLRLLKLDP 179
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ IR IS+GH R L++ D ++++ +SVR+TE VQ+ N ++
Sbjct: 180 IIQTGIRDGFISMGHGRALINVEDREEQLAIYNRVIAQNLSVRETEMAVQQLKNPQKVAV 239
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ + ++E + + +++ G N +I+ + KG+ I ++T E+ K I +L
Sbjct: 240 IVPKRAKEIPAFAAEGMERLRQHFGNNATIRIDKTGKGKVEIPFKTEEEFKRIQKIL 296
>gi|302207204|gb|ADL11546.1| Chromosome partitioning protein ParB [Corynebacterium
pseudotuberculosis C231]
Length = 350
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 51/349 (14%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDS--------------------------------- 27
M+ K LGRG+ ALI
Sbjct: 1 MAQETRKGGLGRGIGALITGSPAPGQRIGASAADVVFGGAAEKKKQSHSPRDAKGARISP 60
Query: 28 ---------------PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
+++ E + I I I+PN NPR+ F+ E L +L SI+
Sbjct: 61 IIAQAVEKQSAGSRGADQQLEEFGATYREIPIGLIIPNEKNPRSVFDEEDLAELVHSIRE 120
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G++QP++VR + Y+II GERR+RA+ A L +P ++R D+ L A++EN+ R
Sbjct: 121 FGLLQPIVVREAADDRYEIIMGERRWRASSKAGLKTIPAVVRKTDDSEMLRDALLENIHR 180
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
LNPLEEA Y+QL+ E+G TQN++ +G+SR + N++R+L LP +V+ + +S
Sbjct: 181 VQLNPLEEAAAYQQLLQEFGVTQNELADKLGRSRPVITNMIRLLALPVAVQRKVAAGVLS 240
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK---Y 249
GHAR L+ + + + ++ + +E + +K REK +
Sbjct: 241 AGHARALLGVKGGEAPQVALADRIVAEGLSVRATEEAVTLMNRGEKPAPKKREKAPTPEF 300
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
LT+ +++ + +S+ KG+ +++ E I LLG N
Sbjct: 301 LTNAANRLADGLDTKVSVSMGKRKGKIVVEFGGREDFDRIMGLLGGNSE 349
>gi|237747164|ref|ZP_04577644.1| chromosome partitioning protein ParB [Oxalobacter formigenes
HOxBLS]
gi|229378515|gb|EEO28606.1| chromosome partitioning protein ParB [Oxalobacter formigenes
HOxBLS]
Length = 295
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 110/302 (36%), Positives = 170/302 (56%), Gaps = 20/302 (6%)
Query: 1 MSNN--YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS K+ LGRGL L+G +S+ + + PR
Sbjct: 1 MSEATTKKKKGLGRGLEVLLGTAPDFSS--------GSSQVSTLSMSRLQAGKYQPRTRM 52
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
+ L +L QSI+ G++QP++VR +Y+IIAGERRFRAA++A L E+PV+I+
Sbjct: 53 DEGALNELAQSIREQGVMQPILVRPAEDRNGERIYEIIAGERRFRAAQIAGLREMPVVIK 112
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+VD++++ +A++EN+QR+DLNPLEEA G +LIS++ +T S VG+SRS V N+LR
Sbjct: 113 DVDDQTAAAMALIENMQREDLNPLEEAQGIHRLISDFNFTHEQAASAVGRSRSAVTNLLR 172
Query: 175 ILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
+L L V+ M+ +I +GHAR L V + +SLA +V+K+MSVR+ E+LV + N
Sbjct: 173 LLNLTRPVQTMLIAGDIDMGHARALLAVDGAKQISLATQVVAKRMSVREAEKLVARELNN 232
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICS 291
K+I +EK L LE+++S + +S K KGQ I + + L +
Sbjct: 233 PNSLKRIM---KEKSADLVQLEEELSDLLATKVSFKLGSKGKGQLVIDFADLDVLDGLIQ 289
Query: 292 LL 293
+
Sbjct: 290 KI 291
>gi|288924694|ref|ZP_06418631.1| spoOJ protein [Prevotella buccae D17]
gi|288338481|gb|EFC76830.1| spoOJ protein [Prevotella buccae D17]
Length = 302
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 110/303 (36%), Positives = 169/303 (55%), Gaps = 17/303 (5%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
++N LGRGL ALI S E + + ++I I NP+ PR F+ E
Sbjct: 8 NSNAKSNALGRGLDALI--------STETVRTQGSSTINEVAIDRIEANPNQPRREFDEE 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L SI+ GIIQP+ +R D+ ++IIAGERR+RA+++A L +P IR +D+++
Sbjct: 60 ALQELAHSIRQIGIIQPITLRQTDDNRFQIIAGERRWRASQLAGLKAIPAYIRTIDDENV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L+ + G TQ I VGKSR+ +AN LR+LKLP+
Sbjct: 120 MEMALVENIQREDLNSIEIALAYEHLLEKSGMTQEKISERVGKSRAAIANYLRLLKLPAQ 179
Query: 182 VREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR-- 236
V+ ++K+EI +GHAR L+ S S + L + I SVR EELVQ+ N +
Sbjct: 180 VQMALQKKEIDMGHARALLALDSPSLQIKLFKEIQKNGFSVRKVEELVQQLKNGIDIEAG 239
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIIC---SL 292
KK + + L++ +S + + KG+ I + +L+ I
Sbjct: 240 KKKIAAKSQLPEEFNLLKEHLSGFFNTKVQMTCSPKGKGKISIPFANETELERIMNVFDK 299
Query: 293 LGE 295
L +
Sbjct: 300 LKD 302
>gi|315640395|ref|ZP_07895508.1| chromosome partitioning protein SpoOJ [Enterococcus italicus DSM
15952]
gi|315483851|gb|EFU74334.1| chromosome partitioning protein SpoOJ [Enterococcus italicus DSM
15952]
Length = 295
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 100/283 (35%), Positives = 165/283 (58%), Gaps = 9/283 (3%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
+ AL ++ ++ + + + ++ + PNP+ PR F+ L++L SI+
Sbjct: 12 IDALFQDMASL-----EEVDVQRDEVIEVPLNELRPNPYQPRKTFDESSLQELASSIEQS 66
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G+ QP+I+R Y+IIAGERRFRA+K+A +P IIR+ D ++ +++A++EN+QR+
Sbjct: 67 GVFQPIIIRKSAVKGYEIIAGERRFRASKLAKKETIPAIIRSFDEEAMMQVAVLENLQRE 126
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
DLNPLEEA Y+ L+ TQ ++ +GKSR ++AN LR+L LP V+EM++ E +S+
Sbjct: 127 DLNPLEEAEAYDMLMKNLKLTQAEVAERLGKSRPYIANYLRLLALPKLVKEMVQDERLSM 186
Query: 194 GHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
G ART L L +A V + ++VR E+LV N+ +KK+ +EK YL
Sbjct: 187 GQARTLLGLKKKDQMLKMANRCVKENLTVRQLEQLVA-ATNEARGKKKVPRMIKEKPYYL 245
Query: 251 TDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E ++ K G ++ I+ + KG+ I+Y + L I LL
Sbjct: 246 RESEDRLMDKFGTSVEIREKEGKGKIEIEYLSQSDLTRILDLL 288
>gi|220903301|ref|YP_002478613.1| parB-like partition protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867600|gb|ACL47935.1| parB-like partition protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 304
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 109/308 (35%), Positives = 164/308 (53%), Gaps = 24/308 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS N K+ LGRGL AL G + + + + S+ PNP PR +F+
Sbjct: 1 MSGN--KKGLGRGLDALFGGSEPKREQEAASSS--------LPVSSLRPNPGQPRRHFDE 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRA-IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L +L SIK+ GIIQPL+VR Y+I+AGERR+RAA+MA L VPV IR + +K
Sbjct: 51 VALRELAASIKAQGIIQPLLVRPLAGGETYQIVAGERRWRAAQMAGLDNVPVYIRELSDK 110
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+ A++EN+QR+DLNP+EEA + L TQ ++ + +GKSR VAN LR+L+L
Sbjct: 111 EVMAAALIENLQREDLNPIEEAEALQALREALDLTQEELAARLGKSRPAVANALRLLQLS 170
Query: 180 SSVREMIRKEEISLGHARTLVSTSDP---LSLAQVIVSKKMSVRDTEELVQEQ------- 229
++ RE ++ IS GHAR L+ +P +L I S M+VR+ E+
Sbjct: 171 AAAREDLQTGRISAGHARCLLGIDEPAAAEALRLRIQSHGMTVREAEDAAAFWRGNSALP 230
Query: 230 ---DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
+ K++++ + SR+K L+K +SS +G I N G+ + Y ++L
Sbjct: 231 WLEEEKQDRKPAPQKISRKKSPAFKVLQKDLSSALGCAAKISGDENGGRISLNYANKQEL 290
Query: 287 KIICSLLG 294
+ G
Sbjct: 291 DALLEKFG 298
>gi|218960617|ref|YP_001740392.1| parB-like domain protein [Candidatus Cloacamonas acidaminovorans]
gi|167729274|emb|CAO80185.1| parB-like domain protein [Candidatus Cloacamonas acidaminovorans]
Length = 285
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 104/286 (36%), Positives = 166/286 (58%), Gaps = 10/286 (3%)
Query: 10 LGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQS 69
LGRGL+ALI + + + +T + I SI PN + PR F+ E + +L +S
Sbjct: 5 LGRGLSALIPDND--------REQTPQLGITTLPIASIKPNRYQPRKKFDPEKMAELTES 56
Query: 70 IKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
IK +GIIQPLIV + Y+++AGERR AAK A L +VPV+IR+V K L++A++EN
Sbjct: 57 IKENGIIQPLIVTKTSSSEYELVAGERRLEAAKQAGLEKVPVVIRSVSKKEQLQLALIEN 116
Query: 130 VQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
+QR+DLNP+EEA+ Y L+ ++G T N I IVGK R+ V N LR+LKLP V++M+
Sbjct: 117 IQREDLNPIEEAIAYNTLVEDFGLTHNQISEIVGKDRATVTNSLRLLKLPEEVKQMLVSG 176
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
E++ G ART++S L + K ++ T +E+ K +
Sbjct: 177 ELNSGLARTVLSVPPELQNSFAEYIIKYNL--TVRQAEEKAKTFSLANKEEPEKAKTNAR 234
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+LE+++S+ L + ++ N KG+ + Y++ E+L+ ++L +
Sbjct: 235 TKELERELSNLFCLKVKVQENNGKGKITLVYKSPEELEAFKTILNK 280
>gi|12230443|sp|Q50201|PARB_MYCLE RecName: Full=Probable chromosome-partitioning protein parB
gi|886318|gb|AAB53134.1| ORF333; hypothetical 35.8 Kd protein; similar to hypothetical 32.4
kd protein in GIDB-UNCI intergenic region of P.putida
and to 32.8 kd protein in SPO0J-GIDB intergenic region
of B. subtilis; putative [Mycobacterium leprae]
Length = 333
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 91/322 (28%), Positives = 157/322 (48%), Gaps = 34/322 (10%)
Query: 6 SKRRLGRGLAALIGEVNQSIDS--------------------PEKKTETIPESQDCISIH 45
K LGRGLA+LI DS +K + I++
Sbjct: 7 KKGGLGRGLASLIPTGPVDADSGPATYGPQMGNTAADVLIGGSAQKDNAMGAVYREIALS 66
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAA 101
I NP PR F+ E + +L SI+ G++QP++VR + Y+I+ GERR+RAA
Sbjct: 67 DITENPCQPRQVFDDEAMSELVHSIREFGLLQPIVVRPASGSCGDTRYQIVMGERRWRAA 126
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
+ A LS +P I+R + S L A++EN+ R LNPLEEA Y+QL+ E+ T +++ S
Sbjct: 127 QQAGLSFIPAIVRATGDDSMLRDALLENIHRVQLNPLEEAAAYQQLLDEFEVTHDELASR 186
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK------ 215
+G+SR + N++R+LKLP V+ + +S GHAR L+S + + + S+
Sbjct: 187 IGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEANPEVQEELASRIIAEGL 246
Query: 216 -KMSVRDTEELVQEQDNKKEKRKKIFEGSREKE---KYLTDLEKKISSKVGLNISIKHRN 271
+ + +L + N+ + R K L D+ +++S+ + +
Sbjct: 247 SVRATEEAVKLANHEVNRVNREVITPVPQRRKPICMPGLQDVAERLSNAFDTRVMVSLGK 306
Query: 272 NKGQFCIKYETNEQLKIICSLL 293
KG+ +++ + + L+ I ++
Sbjct: 307 RKGKIVVEFSSVDDLQRIVDVM 328
>gi|269468610|gb|EEZ80254.1| ParB-like nuclease [uncultured SUP05 cluster bacterium]
Length = 281
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 106/296 (35%), Positives = 173/296 (58%), Gaps = 17/296 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ LGRGL L+G+V+ + S +S+ S+ PR+ +
Sbjct: 1 MAKTSK---LGRGLDILLGQVSL------ENQSNTENSMQMLSVKSLQRGKFQPRDDIDP 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L +L +SI S G+IQPL+VR I ++IIAGERR+RAA++A LSEVPVI+R +D++
Sbjct: 52 DTLNELAESITSQGVIQPLVVRKITYDKFEIIAGERRWRAAQIAGLSEVPVIVREIDDQV 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L I ++EN+QR+ L PLEEA +QLI ++ T +I +VG+SRS V+N++R+L+L
Sbjct: 112 ALAIGLIENIQRESLTPLEEAKALQQLIEDFKMTHEEISHVVGRSRSAVSNLIRLLQLND 171
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++++ +I +GHAR L + +A +V + +SVR TEELV++ N
Sbjct: 172 PVKQLLGNGDIEMGHARALLALKDDVQFDVANQVVQRSLSVRQTEELVKKVLN------P 225
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ S + ++ +L K +S+K+ IK N+KG+ I Y + ++L I +
Sbjct: 226 KPKKSTSVDPHIEELIKSLSNKLNSKTEIKQTNDKGKIIIHYSSADELNNILKHIK 281
>gi|94312434|ref|YP_585644.1| chromosome segregation DNA-binding protein [Cupriavidus
metallidurans CH34]
gi|93356286|gb|ABF10375.1| exonuclease involved in chromosome partitioning ParB [Cupriavidus
metallidurans CH34]
Length = 300
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 185/299 (61%), Gaps = 11/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + +++ +++ + + + + P + PR +
Sbjct: 4 MSTA-KKKGLGRGLEALLGGPAEIVETSKQE-----GAPSVLRVDQLQPGKYQPRTRMDE 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L SI++ G++QP++VR + + Y+IIAGERR+RA+K+A L +VPV++++V ++
Sbjct: 58 GALQELAASIRAQGLMQPILVRRVAEPDRYEIIAGERRYRASKLAGLDKVPVLVKDVADE 117
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++ +A++EN+QR+DLNPLEEA G +LI E+ +T VG+SRS V+N+LR+L L
Sbjct: 118 AAAAMALIENIQREDLNPLEEAQGIMRLIREFRFTHEQAAESVGRSRSAVSNLLRLLNLA 177
Query: 180 SSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ V+ M+ ++ +GHAR L V ++ ++LA IV+K++SVR+TE+LV + +
Sbjct: 178 APVQTMLMAGDLDMGHARALLAVDGANQITLANQIVNKRLSVRETEKLVASTLKPFDLKS 237
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGE 295
+ + + LE+++S +GL++ IK KGQ I + +N+ L + + L E
Sbjct: 238 LKQKSGNGT-RDVARLEEELSDTLGLSVQIKLGARGKGQLTIHFASNDALDGVLTRLRE 295
>gi|300689824|ref|YP_003750819.1| chromosome partitioning protein ParB [Ralstonia solanacearum PSI07]
gi|299076884|emb|CBJ49497.1| chromosome partitioning protein ParB [Ralstonia solanacearum PSI07]
Length = 303
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 98/300 (32%), Positives = 184/300 (61%), Gaps = 14/300 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL L+G + ++ ++ + + + + P + PR +
Sbjct: 1 MST-MKKKGLGRGLEVLLGSPAEIVEVVKQD-----GAPTVLKLEQMQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN----GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI++ G++QP++VR +++ Y+IIAGERRFRA+++A L+EVPV++++V
Sbjct: 55 GALQELAASIRAQGLMQPILVRKVESDGPAQKYEIIAGERRFRASRLAGLTEVPVLVKDV 114
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++++ +A++EN+QR+DLNPLEEA G +LI E+ +T +G+SRS V+N+LR+L
Sbjct: 115 PDEAAAAMALIENIQREDLNPLEEAQGIARLIREFQFTHEQAAESLGRSRSAVSNLLRLL 174
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ M+ ++ +GHARTL V + ++LA I++K++SVR+TE+LV E
Sbjct: 175 NLAQPVQTMLMAGDLDMGHARTLLAVDGASQITLANQIINKRLSVRETEKLVASTLKPFE 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + + ++ + + LE++++ +GL + IK +GQ +++ + ++ + + L
Sbjct: 235 LKSQRQKNAQNG-RDVARLEEELADMLGLPVQIKLAAKGRGQLTVQFASLDEFDGLLARL 293
>gi|148261389|ref|YP_001235516.1| parB-like partition protein [Acidiphilium cryptum JF-5]
gi|146403070|gb|ABQ31597.1| chromosome segregation DNA-binding protein [Acidiphilium cryptum
JF-5]
Length = 292
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 106/295 (35%), Positives = 173/295 (58%), Gaps = 9/295 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS + RRLG+GLA L+G + E + + ++ P P PR +
Sbjct: 1 MSARETPRRLGKGLAELLG----PGTVAAAGQAAMGEGVRHVPVAALHPGPFQPRQAMDE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LE+L S+K+ G++QPL+VRA+ + Y+IIAGERR+RAA+ A L EVPV++R + +
Sbjct: 57 TALEELAASLKAQGVLQPLLVRAVPDKAGQYQIIAGERRWRAAQRAGLHEVPVLVRALSD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++ +VEN+QR+DL+P+EEA GY +L+ E+G Q ++ +V KSR HVAN++R+L L
Sbjct: 117 SDAMAAGLVENLQRQDLDPIEEAEGYRRLVEEFGLIQEELARVVAKSRPHVANMMRLLNL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P+SV++ +R ++S GHAR L+ DP + A+ IV+K+++VR TE +V +
Sbjct: 177 PTSVQKALRGGDLSAGHARALLQHPDPEAAARAIVAKRLTVRQTEAMV---QAALVPKPG 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ LE ++++ +GL + + G + Y+ +QL I +LL
Sbjct: 234 RSRREATENSVTRSLETELTALLGLRVKVTFDGKGGSVSLAYQDLDQLDGILALL 288
>gi|300702505|ref|YP_003744105.1| chromosome partitioning protein parb [Ralstonia solanacearum
CFBP2957]
gi|299070166|emb|CBJ41457.1| chromosome partitioning protein ParB [Ralstonia solanacearum
CFBP2957]
Length = 303
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 99/300 (33%), Positives = 185/300 (61%), Gaps = 14/300 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + +++ +++ + + + + P + PR +
Sbjct: 1 MST-IKKKGLGRGLEALLGSPAEIVEAAKQE-----GAPTVLKLDQMQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN----GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI++ G++QP++VR +++ Y+IIAGERRFRA+++A L+EVPV++++V
Sbjct: 55 GALQELAASIRAQGLMQPILVRKVESDSTAQKYEIIAGERRFRASRLAGLTEVPVLVKDV 114
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++++ +A++EN+QR+DLNPLEEA G +LI E+ +T +G+SRS V+N+LR+L
Sbjct: 115 PDQAAAAMALIENIQREDLNPLEEAQGIARLIREFQFTHEQAAESLGRSRSAVSNLLRLL 174
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ M+ ++ +GHAR L V + ++LA IV+K++SVR+TE+LV E
Sbjct: 175 NLAQPVQTMLMAGDLDMGHARALLAVDGATQITLANQIVNKRLSVRETEKLVASTLKPFE 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + + ++ + +T L + ++ +GL + IK +GQ +++ + ++ + + L
Sbjct: 235 LKSQRQKSAQNG-RDVTRLAEDLADSLGLPVQIKLAAKGRGQLVVQFGSLDEFDGLLARL 293
>gi|73543036|ref|YP_297556.1| chromosome segregation DNA-binding protein [Ralstonia eutropha
JMP134]
gi|72120449|gb|AAZ62712.1| chromosome segregation DNA-binding protein [Ralstonia eutropha
JMP134]
Length = 300
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 104/297 (35%), Positives = 181/297 (60%), Gaps = 11/297 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + +++ +++ + + + + P + PR +
Sbjct: 1 MST-VKKKGLGRGLEALLGGPAEIVETAKQE-----GAPTVLRLDQLQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L SI++ G++QP++VR + + Y+IIAGERRFRA+++A L +VPV+++ V ++
Sbjct: 55 GALQELAASIRAQGLMQPILVRRVAEPDRYEIIAGERRFRASRLAGLDKVPVLVKEVADE 114
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++ +A++EN+QR+DLNPLEEA G +LI E+ +T VG+SRS V+N+LR+L L
Sbjct: 115 AAAAMALIENIQREDLNPLEEAQGIMRLIREFQFTHEQAAESVGRSRSAVSNLLRLLNLA 174
Query: 180 SSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ V+ M+ ++ +GHAR L + ++ ++LA IV+K++SVR+TE+LV E +
Sbjct: 175 APVQTMLMAGDLDMGHARALLALDGANQITLANQIVNKRLSVRETEKLVAATLKPFELKS 234
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ + + LE+++S +GL++ IK KGQ I + NE L + L
Sbjct: 235 LKHKTGNGM-RDVARLEEELSDALGLSVQIKVGARGKGQLTIHFSNNEALDDVLERL 290
>gi|34540004|ref|NP_904483.1| spoOJ protein [Porphyromonas gingivalis W83]
gi|188994118|ref|YP_001928370.1| putative ParB chromosome partitioning protein [Porphyromonas
gingivalis ATCC 33277]
gi|34396315|gb|AAQ65382.1| spoOJ protein [Porphyromonas gingivalis W83]
gi|188593798|dbj|BAG32773.1| putative ParB chromosome partitioning protein [Porphyromonas
gingivalis ATCC 33277]
Length = 289
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 90/296 (30%), Positives = 158/296 (53%), Gaps = 16/296 (5%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
++K+ LGRGL +L+ S ++I I PNP PR FE E
Sbjct: 1 MKHTKKTLGRGLDSLL-----------DAEVIGSSSISEVAISDIYPNPDQPRRTFEEES 49
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L++L S++S G++QP+ + G Y II+GERR+RAA+MA ++ +P I+ +++ +
Sbjct: 50 LKELAASLRSIGLVQPITLLKKSAGDYMIISGERRWRAARMAGMTTLPAYIKTEEDEHVM 109
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR+DLN +E +L Y++LI Y TQ ++ + VGK R+ ++N LR+LKLP +
Sbjct: 110 EMALIENIQREDLNAIEISLAYQKLIETYDLTQEELSTRVGKKRTTISNYLRLLKLPGEI 169
Query: 183 REMIRKEEISLGHARTLVSTSDPLS----LAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+ + +++I +GHAR L+S DP A++I ++ + K
Sbjct: 170 QIGLTQKKIDMGHARALLSIPDPEHQLALYAEIIRQGLSVRAVESLAAHYREEGADSPAK 229
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ + + L ++S + + KG+ I + + E+L+ I +LL
Sbjct: 230 QKKTKQSLPEEYRLLTGQLSRFFRTKVKLDCDAKGKGKLTIPFASEEELERIMALL 285
>gi|212640672|ref|YP_002317192.1| stage 0 sporulation protein J (antagonist of Soj), contain
ParB-like nuclease domain [Anoxybacillus flavithermus
WK1]
gi|212562152|gb|ACJ35207.1| Stage 0 sporulation protein J (antagonist of Soj), contain
ParB-like nuclease domain [Anoxybacillus flavithermus
WK1]
Length = 287
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 106/292 (36%), Positives = 163/292 (55%), Gaps = 12/292 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL + E+ I I + PNP+ PR F + LE+L
Sbjct: 3 KGLGKGIHALFTNLEAEK----------GETVQDIEIQQLRPNPYQPRKTFHEQALEELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI HGI+QPLIVR Y+I+ GERRFRAA++A L VP ++R + ++ +EIA++
Sbjct: 53 QSIIEHGIVQPLIVRQT-IKGYEIVVGERRFRAAQLAGLKTVPAVVRELSDEKMMEIALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA Y+ L+++ TQ ++ +GKSR H+AN LR+L LPS V++MI
Sbjct: 112 ENLQREDLNPIEEATAYQLLLTKCKLTQEELAKRLGKSRPHIANHLRLLSLPSDVQQMIE 171
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF-EGSREK 246
+ +S+GH R L++ + L+ VI + +L E + + EK
Sbjct: 172 EGTLSMGHGRALLALKNKQKLSAVIERVIQQSLNVRQLEALIQQLNENVPRETLKKKEEK 231
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
+LT E + ++G ++SIK KG+ I++ + E L I LL D
Sbjct: 232 NIFLTQSEALLRERLGTSVSIKKHRKKGKIEIEFFSEEDLTRILQLLHAYDE 283
>gi|256820392|ref|YP_003141671.1| parB-like partition protein [Capnocytophaga ochracea DSM 7271]
gi|256581975|gb|ACU93110.1| parB-like partition protein [Capnocytophaga ochracea DSM 7271]
Length = 310
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 109/310 (35%), Positives = 167/310 (53%), Gaps = 12/310 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI--DSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ K LGRG++A+ G + +K + I + + ++ I NP PR F
Sbjct: 1 MTKPAKKPALGRGISAIFGNSPEVAINSIKDKNADKIVGNIIELELNLIETNPFQPRTSF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAID-NGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L+ L SI+ G++QP+ VR +D Y++I+GERRFRA+K+A L +P IR D
Sbjct: 61 NEEELQGLASSIEELGVVQPITVRKLDGENKYQLISGERRFRASKLAGLKTIPAYIRIAD 120
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ SL +A+VEN+QR+DL+P+E AL Y+QLI + TQ+ + VGK RS + N LR+LK
Sbjct: 121 DNESLTMALVENIQRQDLDPIEIALSYQQLIEQVNLTQDQMSKRVGKKRSTITNYLRLLK 180
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKE 234
L ++ IR IS+GH R +++ +P A+V +SVRDTEELV+ N +
Sbjct: 181 LAPIIQTGIRDGFISMGHGRAIIAIENPEQQAEVYQRIISDNLSVRDTEELVRRLQNSET 240
Query: 235 K-----RKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKI 288
+ E Y+ + + G +++K +N KG I + + E K
Sbjct: 241 PNVVSIQIPKSNSKTEVPTYIKENMSSFNHFFGTKVTVKMSKNGKGSLTIPFSSEEDFKR 300
Query: 289 ICSLLGENDF 298
I SLL + D
Sbjct: 301 IQSLLHKKDE 310
>gi|281423895|ref|ZP_06254808.1| spoOJ protein [Prevotella oris F0302]
gi|281401983|gb|EFB32814.1| spoOJ protein [Prevotella oris F0302]
Length = 296
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 106/301 (35%), Positives = 168/301 (55%), Gaps = 14/301 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI S + + + I+I I NP+ PR F+
Sbjct: 1 MAVHKKYNSLGRGLDALI--------STDAVRTQGSSTINEIAIDQIEANPNQPRREFDD 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L+DL SIK GIIQP+ +R I + ++IIAGERR+RA+++A L +P IR + +++
Sbjct: 53 EALQDLANSIKEIGIIQPITLRQIADNRFQIIAGERRWRASQLAGLKALPAYIRTIKDEN 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A+VEN+QR+DLN +E AL YE L+ G TQ + VGKSR+ + N LR+LKLP+
Sbjct: 113 VMEMALVENIQREDLNAIEIALAYEHLLESNGMTQEKVSERVGKSRTAITNYLRLLKLPA 172
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ ++K+EI +GHAR L+ S + + L + I+ SVR EELVQ N +
Sbjct: 173 QVQMALQKKEIDMGHARALLALDSPALQIKLFKEILKNGYSVRKVEELVQALKNGDDIES 232
Query: 238 KIFE--GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + L+ +++ + + + KG+ I + E+L+ I +L
Sbjct: 233 GKKKIIARNQLPEEFCVLKNRLAKFLNTKVQMTYSSKGKGKISIPFANEEELERIMNLFD 292
Query: 295 E 295
+
Sbjct: 293 K 293
>gi|53712060|ref|YP_098052.1| putative chromosome partitioning protein ParB [Bacteroides fragilis
YCH46]
gi|60680254|ref|YP_210398.1| putative ParB-like chromosome partitioning protein [Bacteroides
fragilis NCTC 9343]
gi|253563901|ref|ZP_04841358.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|255007593|ref|ZP_05279719.1| putative ParB-like chromosome partitioning protein [Bacteroides
fragilis 3_1_12]
gi|265765395|ref|ZP_06093670.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|313145286|ref|ZP_07807479.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|52214925|dbj|BAD47518.1| putative chromosome partitioning protein ParB [Bacteroides fragilis
YCH46]
gi|60491688|emb|CAH06440.1| putative ParB-like chromosome partitioning protein [Bacteroides
fragilis NCTC 9343]
gi|251947677|gb|EES87959.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263254779|gb|EEZ26213.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301161781|emb|CBW21321.1| putative ParB-like chromosome partitioning protein [Bacteroides
fragilis 638R]
gi|313134053|gb|EFR51413.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 296
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 95/299 (31%), Positives = 156/299 (52%), Gaps = 16/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ S E+ S + I + I NP+ PR F+
Sbjct: 1 MAT-QRRNALGRGLDALL--------SMEEVKTEGSSSINEIELSKISVNPNQPRREFDE 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L SI+ GIIQP+ +R + + Y+IIAGERR+RA++ A L +P IR D+++
Sbjct: 52 TALEELADSIREIGIIQPITLRKVSDDEYQIIAGERRYRASQKAGLDTIPAYIRTADDEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ LI +Y TQ + VGK R+ +AN LR+LKLP+
Sbjct: 112 VMEMALIENIQREDLNSVEIALAYQHLIEQYDLTQERLSERVGKKRTTIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
++ ++ ++I +GHAR L++ V + + + E + K
Sbjct: 172 PIQMALQNKQIDMGHARALITLGDPKLQVKIFEEILEHGYSVRKVEEIVKSLSEGEAVKS 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
KKI + + L++ +S + + KG+ I + E+L+ I +
Sbjct: 232 GTKKITPKRAKLPEEFNMLKQHLSGFFNTKVQLTCSEKGKGKISIPFSNEEELERIMEI 290
>gi|325107171|ref|YP_004268239.1| parB-like partition protein [Planctomyces brasiliensis DSM 5305]
gi|324967439|gb|ADY58217.1| parB-like partition protein [Planctomyces brasiliensis DSM 5305]
Length = 332
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 94/304 (30%), Positives = 164/304 (53%), Gaps = 15/304 (4%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQ-------DCISIHSIVPNPHNPRNYFE 59
KRRLGRGL AL+G + + E + I+I I NP+ PR FE
Sbjct: 24 KRRLGRGLNALLGGAGPTNEPYESDSPAAAAPADGEQLTWTDIAIDRIQRNPNQPRKQFE 83
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E + +L +SI+ HG++QP+IVR +++IAGERR+ AAK A LS+VP + +V +K
Sbjct: 84 KETIAELAESIRKHGVLQPVIVREYG-DNFELIAGERRWLAAKQAGLSKVPARVVDVIDK 142
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+++E A EN++R+DL+ LE+A + I + + ++ + SRS V+N +R+L LP
Sbjct: 143 TAIEYAFEENLKRQDLSDLEKAQAFRDYIDVFETSAEELAKQLSMSRSAVSNTIRLLDLP 202
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+ ++ ++++ GHAR L++ A+ I +++SVR TE V+E ++E
Sbjct: 203 VPVKNAMQSQKLTAGHARALLALKSEDQQLELAERIQKEQLSVRKTEAAVKEMQGRQETI 262
Query: 237 KKIFEGSREKEK---YLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
+ S +K + +L L+ ++ G+ + K + + GQ + + + + I
Sbjct: 263 PMEKKESSDKPELTNHLKSLQDQLRDGFGVKVEFKLKTKDSGQVVLHFANQDDFERILEK 322
Query: 293 LGEN 296
L +
Sbjct: 323 LQSS 326
>gi|268316022|ref|YP_003289741.1| parB-like partition protein [Rhodothermus marinus DSM 4252]
gi|262333556|gb|ACY47353.1| parB-like partition protein [Rhodothermus marinus DSM 4252]
Length = 317
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 173/306 (56%), Gaps = 25/306 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP---------------ESQDCISIH 45
M+ K LGRGL+AL+ NQ +PE+ T I I
Sbjct: 1 MA--TKKAALGRGLSALLPSANQETSTPEEVTGVETPKSRLYHFEERLRLLGRVAEIDID 58
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMAS 105
I PNP+ PR F+ E L++L +SI GIIQP+ VRA+ N +++I+GERR RAA+ A
Sbjct: 59 RIRPNPYQPRKDFDEEALDELARSIAQLGIIQPITVRALGNNEFEVISGERRLRAARRAG 118
Query: 106 LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKS 165
L VP +R D + LE+A+VENVQR++LNP+E ALGY++LI E G TQ + VGK+
Sbjct: 119 LKRVPAYVREADTEEMLEMALVENVQREELNPIEVALGYQRLIEECGLTQEQVAEKVGKN 178
Query: 166 RSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTE 223
R+ VAN LR+LKLP ++ +R I+ GHAR L+ L L Q I +K++SVR+ E
Sbjct: 179 RATVANFLRLLKLPPRIQASLRDGTITAGHARALIGLPEPVQLRLLQEIETKQLSVREVE 238
Query: 224 ELVQEQDNKKEKRKKIFEGSREKEKY-----LTDLEKKISSKVGLNISIKHRNNK-GQFC 277
E V+ ++E++ + E + D E ++ ++G + I+HR+ + G+
Sbjct: 239 ERVRAWHRRQERKTAGEAATASAEPDPETLQIRDYEDQLRRRLGTQVRIRHRSGRGGRIE 298
Query: 278 IKYETN 283
I Y ++
Sbjct: 299 IAYFSD 304
>gi|166032903|ref|ZP_02235732.1| hypothetical protein DORFOR_02624 [Dorea formicigenerans ATCC
27755]
gi|166027260|gb|EDR46017.1| hypothetical protein DORFOR_02624 [Dorea formicigenerans ATCC
27755]
Length = 302
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 108/299 (36%), Positives = 177/299 (59%), Gaps = 12/299 (4%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSI----DSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
K+ LG+GL +LI E + + EK+ + I+ + PN PR F
Sbjct: 1 MAVKKKGLGKGLDSLIPEKSNKPLAKEPAEEKRKSESGSGIQMMKINMVEPNRDQPRKKF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ + + +L SIK G++QPL+VR Y+IIAGERR+RAAK A + EVPVI++
Sbjct: 61 DEDAILELADSIKQFGVLQPLLVRKNK-DYYEIIAGERRWRAAKQAGVKEVPVIVKEYTE 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +EI ++EN+QR++LNP+EEA+ +++L+ E+ Q+++ V KSR+ V N +R+LKL
Sbjct: 120 QEIVEIGLIENIQRENLNPIEEAMAFKRLLEEFNLKQDEVAERVSKSRTAVTNSMRLLKL 179
Query: 179 PSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
V++MI + IS GHAR L+ + +LA I +K+SVRDTE+LV+E N K+
Sbjct: 180 DERVQQMIIDDMISTGHARALLAIDDKDEQYNLANRIFDEKLSVRDTEKLVKEIKNPKKT 239
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
++K+ + + DL K+ +G +SI N KG+ I+Y ++E+L+ + ++
Sbjct: 240 KEKVKTVN---DFIYKDLANKMKEVMGTKVSIASKGNGKGKIEIEYYSDEELERMFDMI 295
>gi|303236716|ref|ZP_07323295.1| ParB-like protein [Prevotella disiens FB035-09AN]
gi|302482884|gb|EFL45900.1| ParB-like protein [Prevotella disiens FB035-09AN]
Length = 301
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 167/300 (55%), Gaps = 14/300 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ N LGRGL ALI S E + + + + I I NP+ PR F+
Sbjct: 8 NTNTKTSALGRGLDALI--------STETVSTQGSSTINEVPISQIEANPNQPRREFDQV 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LE+L SIK G++QP+ +R ID+ Y+I+AGERR+RA+++A L+ +P IR + +++
Sbjct: 60 ALEELANSIKQLGLVQPITLRQIDDNKYQIVAGERRWRASQLAGLTAIPAYIRTIKDENV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L + G TQ + VGKSR+ V N LR+LKLP+
Sbjct: 120 MELALVENIQREDLNAIEIALAYEHLQEKSGMTQEKVAERVGKSRAAVTNYLRLLKLPAQ 179
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIV---SKKMSVRDTEELVQEQDN--KKEKR 236
V+ ++K++I +GHAR L+S P ++ SVR EEL Q+ N
Sbjct: 180 VQMALQKKDIDMGHARALLSLDSPSLQLKLFHEVIKNNYSVRKVEELCQQLKNGEDITTA 239
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGE 295
KK + + L+K++S + + + + KG+ I + + E+L I ++ +
Sbjct: 240 KKKIAAKSKLPEEFNLLKKRLSDFFQTKVQMSYGASGKGKISIPFASEEELLHIMEVMDK 299
>gi|260591309|ref|ZP_05856767.1| spoOJ protein [Prevotella veroralis F0319]
gi|260536675|gb|EEX19292.1| spoOJ protein [Prevotella veroralis F0319]
Length = 301
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 171/300 (57%), Gaps = 14/300 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ N LGRGL ALI S E + + + I++ I NP+ PR F+
Sbjct: 8 NRNTKTNALGRGLDALI--------STETVSTQGSSTINEIALDQIEANPNQPRREFDPV 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LE+L SI+ G++QP+ +R I + ++IIAGERR+RA+++A L+ +P IR + ++S
Sbjct: 60 ALEELANSIRELGLVQPITLRQIADNRFQIIAGERRWRASQLAGLTAIPAYIRTIKDESV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L+ + G TQ + VGKSR+ VAN LR+LKLP+
Sbjct: 120 MELALVENIQREDLNAIEIALAYEHLLEKSGMTQERVAERVGKSRAAVANYLRLLKLPAQ 179
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++K+ + +GHAR L+S P + I+ SVR EEL Q + ++ +
Sbjct: 180 VQMALQKKYVDMGHARALLSLDSPALQLKLYREILKNGYSVRKVEELCQRLNRGEDIQSA 239
Query: 239 IFE--GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + L++++SS + + + + KG+ I + + E+L+ I ++ +
Sbjct: 240 KKKIAARARLPEEFNILKQRLSSFFNTKVQMSCNASGKGKISIPFASEEELEHIMEVMDK 299
>gi|237749323|ref|ZP_04579803.1| ParB chromosome partitioning protein [Oxalobacter formigenes
OXCC13]
gi|229380685|gb|EEO30776.1| ParB chromosome partitioning protein [Oxalobacter formigenes
OXCC13]
Length = 295
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 105/302 (34%), Positives = 173/302 (57%), Gaps = 20/302 (6%)
Query: 1 MSNN--YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS K+ LGRGL L+G P + I + + PRN
Sbjct: 1 MSEMTIKKKKGLGRGLEVLLGSAPDFSADPSP--------VSSLPITRLQAGKYQPRNRM 52
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAID----NGLYKIIAGERRFRAAKMASLSEVPVIIR 114
+ L +L QSI+ G++QP++VR + +Y+IIAGERR+RAA++A LS++PVI++
Sbjct: 53 DEGALNELAQSIREQGVMQPILVRPVSGSGNTTVYEIIAGERRYRAAQIAGLSDMPVIVK 112
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+VD++++ +A++EN+QR+DLNPLEEA G +LI+++ +T S VG+SRS V+N+LR
Sbjct: 113 DVDDQTAAAMALIENMQREDLNPLEEAQGIHRLITDFEFTHEQAASAVGRSRSAVSNLLR 172
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNK 232
+L L V+ M+ +I +GHAR L++ + A IV+K+MSVR+ E+LV ++ N
Sbjct: 173 LLNLTRPVQTMLVAGDIDMGHARALLAVDGATQIALATQIVAKRMSVREAEKLVAQELN- 231
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICS 291
R + + + EK L LE+++S + +S + +GQ I + + L +
Sbjct: 232 --NRNSVKKVALEKSADLVQLEEELSDLLATKVSFRLGSKGRGQLVIDFANLDILDGLIQ 289
Query: 292 LL 293
+
Sbjct: 290 KI 291
>gi|325291443|ref|YP_004267624.1| chromosome segregation DNA-binding protein [Syntrophobotulus
glycolicus DSM 8271]
gi|324966844|gb|ADY57623.1| chromosome segregation DNA-binding protein [Syntrophobotulus
glycolicus DSM 8271]
Length = 295
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 92/301 (30%), Positives = 155/301 (51%), Gaps = 25/301 (8%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
S++ LG+GL ALI + + I + +VPNP+ PR F+ E L+
Sbjct: 1 MSRKGLGKGLGALI-----------VERDNTNGEIKEILLRDLVPNPNQPRKEFDQEKLQ 49
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ HG+IQP++V+ + Y IIAGERRFRA+++ L + I+R ++ E
Sbjct: 50 ELADSIREHGLIQPVLVKPHEGK-YCIIAGERRFRASQLLGLDRISCIVRECSDQDMTEK 108
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR DL+P+EE L Y +L+++YG TQ+ + VGK R VAN+LRI++LP V
Sbjct: 109 ALIENIQRTDLSPIEEGLAYARLMNDYGLTQDQVAKKVGKGRPTVANLLRIIQLPQEVLL 168
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL-------------VQEQDN 231
++ ++SLGHA+ L+ D ++ + +L E D
Sbjct: 169 LLSNADLSLGHAKVLLGVEDSSKQIELARTVVEDALSVRQLEMIIAGKILNEETTSEGDP 228
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICS 291
+ K + L D+++K+ + I + +G+ I+Y + ++L +
Sbjct: 229 DSFRNAKKKPQRVFQHSELKDIQEKLHGTFQTKVKIVGNDKRGKIEIEYYSKDELDRLLE 288
Query: 292 L 292
L
Sbjct: 289 L 289
>gi|229495237|ref|ZP_04388972.1| spoOJ protein [Porphyromonas endodontalis ATCC 35406]
gi|229317680|gb|EEN83578.1| spoOJ protein [Porphyromonas endodontalis ATCC 35406]
Length = 284
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 92/294 (31%), Positives = 158/294 (53%), Gaps = 16/294 (5%)
Query: 5 YSK--RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+ R LGRGL L+GE + + S + ++I SI PNP PR F+ E
Sbjct: 1 MKRENRPLGRGLDNLLGEASGT------------SSINEVNIDSIQPNPDQPRRAFDEES 48
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L +L SI+S G++QP+ ++ + +G Y II+GERR+RA K A LS +P I+ D++ +
Sbjct: 49 LAELALSIQSIGLVQPITLKQLQDGTYLIISGERRWRACKRAGLSTIPAYIKTADDEQIM 108
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR+DLN +E AL Y +L+ Q D+ VGK+RS ++N LR+L+LP+ +
Sbjct: 109 EMALIENIQREDLNAIEIALAYHRLLQNSDMKQEDLAKRVGKTRSSISNYLRLLRLPAEI 168
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ + +++I +GHAR +++ V + ++ + + + G
Sbjct: 169 QLGLTEKKIDMGHARAILALPRLEDQLSVYATTIKKNLSVRQIEYLIKRMMRESELVRTG 228
Query: 243 SREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
RE + L ++S G + I +++ KG+ I++ +L I L E
Sbjct: 229 -REPLPDFSVLNTQLSKFFGSKVKITGNKSGKGKLTIEFANEAELAHIIERLEE 281
>gi|149204373|ref|ZP_01881340.1| ParB-like partition protein [Roseovarius sp. TM1035]
gi|149142258|gb|EDM30305.1| ParB-like partition protein [Roseovarius sp. TM1035]
Length = 283
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 105/281 (37%), Positives = 171/281 (60%), Gaps = 7/281 (2%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + +SPE+ T+ + + + PNP+ PR F+ LEDL +SI GI+QPLI
Sbjct: 2 ADVTTESPERPTDAPRRPDLMVPVEKVRPNPNQPRRDFDGALLEDLARSISEKGILQPLI 61
Query: 81 VRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
VR + Y+I+AGERR+RAA+MA L ++PV++R+ ++ LE+AI+EN+QR DLNP+
Sbjct: 62 VRPAPDRDGEYEIVAGERRWRAAQMAKLHQIPVLVRDFNDTEVLEVAIIENIQRADLNPV 121
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA GY+QL+ ++G+TQ + +GKSRSH+AN +R+L LP V +R+ ++S GHAR
Sbjct: 122 EEAFGYQQLMQKFGHTQERLADALGKSRSHIANSVRLLSLPDEVLTFLREGKLSSGHARA 181
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE---KEKYLTDLEK 255
L++ DP ++A+ ++ K +SVR+TE+L + R+ K+ LE
Sbjct: 182 LITLDDPAAIARQVIQKSLSVRETEKLAKAGIGNIFSDAGRSAKPRKEILKDADTRALED 241
Query: 256 KISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLG 294
+S+ + + + I+H G+ I Y + +QL + +L
Sbjct: 242 DLSASLTMKVEIEHVPGQENGRITIHYASLDQLDRLIGMLS 282
>gi|260662614|ref|ZP_05863509.1| chromosome partitioning protein ParB [Lactobacillus fermentum
28-3-CHN]
gi|260553305|gb|EEX26248.1| chromosome partitioning protein ParB [Lactobacillus fermentum
28-3-CHN]
Length = 287
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 98/281 (34%), Positives = 160/281 (56%), Gaps = 9/281 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G S E +++ SI PNP+ PR F+ EGL +L +SI++ G+ QP
Sbjct: 7 GGDAMSDARQLTAPPGPGEVVRELAVDSIRPNPYQPRRTFDQEGLAELARSIEAAGVFQP 66
Query: 79 LIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
+IVR D Y++IAGERR RA KM +P I+R +D+++ +E+A++EN+QR+DL+
Sbjct: 67 IIVRRPDPNLNRYELIAGERRLRATKMTERKTIPAIVRVLDDQTMMEVAVLENLQREDLS 126
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
PLEEA Y+ LI TQ + + +GKSR ++AN LR+L LP V++M+ E+S+G A
Sbjct: 127 PLEEAQAYQTLIERLNLTQAQVAARLGKSRPYIANYLRLLGLPEEVKQMLASGELSMGQA 186
Query: 197 RT---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
RT + + LA+ + ++ ++VR EE+V + + + + YL +
Sbjct: 187 RTLLGVKDERRLVELAKRVANEGLTVRQIEEIVAGINK----KGRQKPVVKSANPYLREA 242
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E +++ K+G +S + + G+ I Y +N+ L I LLG
Sbjct: 243 ESQLAGKLGTKVSFQAKRRGGKIVIPYGSNQDLNRILELLG 283
>gi|17548042|ref|NP_521444.1| chromosome partitioning protein PARB [Ralstonia solanacearum
GMI1000]
gi|17430348|emb|CAD17113.1| putative chromosome partitioning protein parb [Ralstonia
solanacearum GMI1000]
Length = 303
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 100/300 (33%), Positives = 183/300 (61%), Gaps = 14/300 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + ++ + + + + + P + PR +
Sbjct: 1 MST-LKKKGLGRGLEALLGSPAEIVEVARQD-----GAPTVLKLEQMQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN----GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI++ G++QP++VR +D+ Y+IIAGERRFRA+++A L+EVPV++++V
Sbjct: 55 GALQELAASIRAQGLMQPILVRKVDSDGAAQKYEIIAGERRFRASRLAGLTEVPVLVKDV 114
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++++ +A++EN+QR+DLNPLEEA G +LI E+ +T +G+SRS V+N+LR+L
Sbjct: 115 PDEAAAAMALIENIQREDLNPLEEAQGIARLIREFQFTHEQAAESLGRSRSAVSNLLRLL 174
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ M+ ++ +GHARTL V + ++LA I++K++SVR+TE+LV E
Sbjct: 175 NLAQPVQTMLMAGDLDMGHARTLLAVDGASQITLANQIINKRLSVRETEKLVASTLKPFE 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + + + + + LE++++ +GL + IK +GQ +++ + ++ + + L
Sbjct: 235 LKSQRQKNGQNG-RDVARLEEELADMLGLPVQIKLAAKGRGQLTVQFGSLDEFDGLLARL 293
>gi|329900652|ref|ZP_08272544.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Oxalobacteraceae bacterium
IMCC9480]
gi|327549428|gb|EGF33992.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Oxalobacteraceae bacterium
IMCC9480]
Length = 297
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 106/300 (35%), Positives = 173/300 (57%), Gaps = 14/300 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M K LGRGL AL+G E +P + + + ++ + PR +
Sbjct: 1 MVTKKHKSGLGRGLEALLGGSTDF----ELAVPNLPGAPAVLPVVAMQAGKYQPRTRMDE 56
Query: 61 EGLEDLCQSIKSHGIIQP----LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L +L SIK+ G++QP IV Y+IIAGERRFRAA++A LSEVPV++++V
Sbjct: 57 GALNELAASIKAQGVLQPILVRPIVAHDGIERYEIIAGERRFRAAQIAGLSEVPVLVKDV 116
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
D++S+ +A++EN+QR+DLNPLEEA G +LIS++ +T + VG+SRS V+N+LR+L
Sbjct: 117 DDQSAAAMALIENIQREDLNPLEEAQGIHRLISDFEFTHEQAATAVGRSRSAVSNLLRLL 176
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ M+ ++ +GHAR L+ ++LA IV+K+MSVRD E+LV +++
Sbjct: 177 NLAQPVQTMLMAGDLDMGHARALLPVDAATQITLANQIVAKRMSVRDAEKLVTRTSSEQS 236
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ + K + LE+++S + +++K N+GQ I + + + L + + L
Sbjct: 237 ADPQPRKA---KSGDIARLEEELSDSLATTVTVKIGARNRGQLVIDFASLDALDGVIARL 293
>gi|327405542|ref|YP_004346380.1| parB-like partition protein [Fluviicola taffensis DSM 16823]
gi|327321050|gb|AEA45542.1| parB-like partition protein [Fluviicola taffensis DSM 16823]
Length = 303
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 173/305 (56%), Gaps = 12/305 (3%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M++N KR LG+GL AL+ + S D + ISI SI NP NPR FE
Sbjct: 1 MTSNPKKRSALGKGLGALL--ESSSADITTTVSAPSSGGVALISIESIEANPFNPRTNFE 58
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ L +L +SI HGIIQPL VR + Y++I+GERRFRA+++A L EVP IR +++
Sbjct: 59 KDALNELKESISIHGIIQPLTVRKLGKDKYQLISGERRFRASQLAGLEEVPAYIRVANDQ 118
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
S LE+A+VEN+QR+DLN +E AL Y++LI E G TQ+ + + KSR+ + N LR+LKLP
Sbjct: 119 SMLEMALVENIQREDLNAVEVALSYQRLIDEIGLTQDQLSQKISKSRTSITNHLRLLKLP 178
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ ++ +R IS+GHAR LVS D + I+ ++SVR+ EEL+ + +
Sbjct: 179 AEIQLGVRDSLISMGHARALVSAGDENRQLDLYRQIIDFQLSVREIEELI-RTNTSRTSE 237
Query: 237 KKIFEGSREKEKYLTDLEK----KISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICS 291
+ L+ +++ +S ++ + IK + G+ I + + L I
Sbjct: 238 ETPSSPKTASTPELSSIQEVFKNHLSDRISSKVEIKKTHSGSGKITINFSSEVDLNRIIE 297
Query: 292 LLGEN 296
LL ++
Sbjct: 298 LLNKS 302
>gi|299141818|ref|ZP_07034953.1| spoOJ protein [Prevotella oris C735]
gi|298576669|gb|EFI48540.1| spoOJ protein [Prevotella oris C735]
Length = 296
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 106/301 (35%), Positives = 168/301 (55%), Gaps = 14/301 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI S + + + I+I I NP+ PR F+
Sbjct: 1 MAVHKKYNSLGRGLDALI--------STDAVRTQGSSTINEIAIDQIEANPNQPRREFDD 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L+DL SIK GIIQP+ +R I + ++IIAGERR+RA+++A L +P IR + +++
Sbjct: 53 EALQDLANSIKEIGIIQPITLRQIADNRFQIIAGERRWRASQLAGLKALPAYIRTIKDEN 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A+VEN+QR+DLN +E AL YE L+ G TQ + VGKSR+ + N LR+LKLP+
Sbjct: 113 VMEMALVENIQREDLNAIEIALAYEHLLESNGMTQEKVSERVGKSRTAITNYLRLLKLPA 172
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ ++K+EI +GHAR L+ S + + L + I+ SVR EELVQ N +
Sbjct: 173 QVQMALQKKEIDMGHARALLALDSPALQIKLFKEILKNGYSVRKVEELVQALKNGDDIES 232
Query: 238 KIFE--GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + L+ +++ + + + KG+ I + E+L+ I +L
Sbjct: 233 GKKKIIARNQLPEEFCVLKNRLAKFLNTKVQMTCSSKGKGKISIPFANEEELERIMNLFD 292
Query: 295 E 295
+
Sbjct: 293 K 293
>gi|150025202|ref|YP_001296028.1| chromosome partitioning protein ParB [Flavobacterium psychrophilum
JIP02/86]
gi|149771743|emb|CAL43217.1| Chromosome partitioning protein ParB [Flavobacterium psychrophilum
JIP02/86]
Length = 298
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 103/294 (35%), Positives = 163/294 (55%), Gaps = 6/294 (2%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSP-EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K+ +GRGL+AL+ + I S +K + + + + + I NP PR F + L+
Sbjct: 5 KKQAMGRGLSALLKDPENEITSVNDKNADKVVGNIIELELELIEINPFQPRTNFNEDSLQ 64
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ G+IQP+ VR + Y++I+GERR RA+K+ L+ VP IR D+ SL +
Sbjct: 65 ELATSIRELGVIQPITVRKTEFNKYQLISGERRLRASKIVGLTTVPAYIRLADDNESLTM 124
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR DL+P+E AL Y++LI E TQ + VGK RS VAN LR+LKL ++
Sbjct: 125 ALVENIQRHDLDPIEIALSYQRLIDEIQLTQEQMSDRVGKKRSTVANYLRLLKLDPIIQT 184
Query: 185 MIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
IR IS+GH R +++ + Q IVS+ +SVR+TE LV+ +++ ++
Sbjct: 185 GIRDGFISMGHGRAIINVENHDVQTDIYQKIVSQNLSVRETEALVKNYQEGFKQKTELVT 244
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ + D +K + G + +K N KG+ I + + E I L+
Sbjct: 245 KTSSFDVN-EDEKKSFNDYFGTKVDVKVAGNGKGKITIPFHSEEDFNRIIKLIK 297
>gi|226309509|ref|YP_002769471.1| chromosome partitioning protein ParB [Rhodococcus erythropolis PR4]
gi|226188628|dbj|BAH36732.1| probable chromosome partitioning protein ParB [Rhodococcus
erythropolis PR4]
Length = 346
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 99/342 (28%), Positives = 160/342 (46%), Gaps = 51/342 (14%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI----------------------------------- 25
MS K LGRGLAALI +
Sbjct: 1 MSQA-RKGGLGRGLAALIPTGPATAPGLGSAAADVVIGVDKRNPSPPPPTKAAPKTPKAT 59
Query: 26 ----------DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
E + E I I NP PR+ F+ E L +L SI+ G+
Sbjct: 60 KATAAKAPVEAEAETELEPTGAVYLEIEPSLIETNPKQPRSVFDEEALAELVHSIREFGL 119
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
+QP++VR + Y+++ GERR+RA++ A L ++P IIR D+ S L A++EN+ R L
Sbjct: 120 MQPIVVRRHGDK-YQLVMGERRWRASQEAGLEKIPAIIRETDDDSMLRDALLENIHRVQL 178
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
NPLEEA Y+QL+ E+ T ++ + +G+SR V N++R+LKLP +V+ + +S GH
Sbjct: 179 NPLEEAAAYQQLLEEFEVTHEELANRIGRSRPVVTNMIRLLKLPVAVQRRVAAGVLSAGH 238
Query: 196 ARTLVS----TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
AR L+S +A IV++ MSVR TEE V + + + L
Sbjct: 239 ARALLSLEAGADAQEVMAARIVAEGMSVRATEEAVTLANRADNEIAPPQKRKPIVMPGLQ 298
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
D+ +++S +++ KG+ +++ + + L+ I ++
Sbjct: 299 DVAERLSDSFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVGMM 340
>gi|160891219|ref|ZP_02072222.1| hypothetical protein BACUNI_03667 [Bacteroides uniformis ATCC 8492]
gi|270294500|ref|ZP_06200702.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317481103|ref|ZP_07940182.1| ParB-like partition protein [Bacteroides sp. 4_1_36]
gi|156859440|gb|EDO52871.1| hypothetical protein BACUNI_03667 [Bacteroides uniformis ATCC 8492]
gi|270275967|gb|EFA21827.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316902816|gb|EFV24691.1| ParB-like partition protein [Bacteroides sp. 4_1_36]
Length = 294
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 96/300 (32%), Positives = 161/300 (53%), Gaps = 18/300 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL S ++ S + I + I NP+ PR+ F+
Sbjct: 1 MA---QRNALGRGLDALF--------SMDEVKTEGSSSINEIELSKITVNPNQPRHEFDP 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R + + Y+IIAGERRFRA+++A L+ +P IR D+++
Sbjct: 50 VALQELADSISEIGIIQPITLRKLSDDEYQIIAGERRFRASQLAGLTSIPAYIRTADDEN 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ L+ +YG TQ + VGK R+ +AN LR+LKLP+
Sbjct: 110 VMEMALIENIQREDLNSVEIALAYQHLLEQYGLTQERLSERVGKKRTTIANYLRLLKLPA 169
Query: 181 SVREMIRKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
V+ ++ ++I +GHAR LV+ V + + + E ++ K
Sbjct: 170 PVQMGLQNKQIDMGHARALVTLGDPKLQVKIFEEILEHGYSVRKVEEIVKSLSEGESVKS 229
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+KI + + L++++S + + KG+ I + E+L+ I +L
Sbjct: 230 GGRKIAPKRAKLPEEFNMLKQQLSGFFSTKVQLTCSEKGKGKISIPFNNEEELERIIGIL 289
>gi|27364446|ref|NP_759974.1| chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Vibrio vulnificus CMCP6]
gi|320154850|ref|YP_004187229.1| chromosome (plasmid) partitioning protein ParB/Stage 0 sporulation
protein J [Vibrio vulnificus MO6-24/O]
gi|27360565|gb|AAO09501.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Vibrio vulnificus CMCP6]
gi|319930162|gb|ADV85026.1| chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Vibrio vulnificus MO6-24/O]
Length = 293
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 92/298 (30%), Positives = 174/298 (58%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSP----EKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + I++ + P + PR
Sbjct: 1 MSKRGLGKGLDALLSTSSLAREKQHIATQSQALSAEGELTDIAVGQLQPGVYQPRKDMSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI+S GIIQP++VR + +G ++IIAGERR+RAAK+A L VP +I++V++++
Sbjct: 61 QALEELTASIQSQGIIQPIVVRPVQDGHFEIIAGERRWRAAKLAGLKRVPCLIKHVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ L
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQDEFSLTHQQVADVIGKSRTAVSNLLRLNGLEL 180
Query: 181 SVREMIRKE--EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++ + ++ ++ A + + +AQ + SK ++VR TE+LV++ K
Sbjct: 181 EVKQFVAQKLLDMGHARALLALEGEQQVEVAQQVASKALTVRQTEQLVKK-----CLTPK 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ E ++ K++ + +K+S +G +S +++ N K + I + +L+ + + L
Sbjct: 236 VEEKNQPKDEETQQISQKLSETLGAKVSLVRNGNGKAKLTISIDEPHKLEQLIAKLES 293
>gi|184154553|ref|YP_001842893.1| chromosome partitioning protein ParB [Lactobacillus fermentum IFO
3956]
gi|183225897|dbj|BAG26413.1| chromosome partitioning protein ParB [Lactobacillus fermentum IFO
3956]
Length = 287
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 98/281 (34%), Positives = 160/281 (56%), Gaps = 9/281 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G S E +++ SI PNP+ PR F+ EGL +L +SI++ G+ QP
Sbjct: 7 GGDAMSDARQLTAPPGPGEVVRELAVDSIRPNPYQPRRTFDQEGLAELARSIEAAGVFQP 66
Query: 79 LIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
+IVR D Y++IAGERR RA KM +P I+R +D+++ +E+A++EN+QR+DL+
Sbjct: 67 IIVRRPDPNLNRYELIAGERRLRATKMTERETIPAIVRVLDDQTMMEVAVLENLQREDLS 126
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
PLEEA Y+ LI TQ + + +GKSR ++AN LR+L LP V++M+ E+S+G A
Sbjct: 127 PLEEAQAYQTLIERLNLTQAQVAARLGKSRPYIANYLRLLGLPEEVKQMLASGELSMGQA 186
Query: 197 RT---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
RT + + LA+ + ++ ++VR EE+V + + + + YL +
Sbjct: 187 RTLLGVKDERRLVELAKRVANEGLTVRQLEEIVAGINK----KGRQKPVVKSANPYLREA 242
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E +++ K+G +S + + G+ I Y +N+ L I LLG
Sbjct: 243 ESQLAGKLGTKVSFQAKRRGGKIVIPYGSNQDLNRILELLG 283
>gi|160893425|ref|ZP_02074210.1| hypothetical protein CLOL250_00975 [Clostridium sp. L2-50]
gi|156864820|gb|EDO58251.1| hypothetical protein CLOL250_00975 [Clostridium sp. L2-50]
Length = 312
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 178/305 (58%), Gaps = 18/305 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCIS-------------IHSIVPNPH 52
+K+ LGRGL LI +++ + ++ I I PN
Sbjct: 3 TKKGLGRGLNQLIPTGDEARTKSKSTPGETTKTITKEVVKEVVKEVEQKVKITQIEPNKS 62
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI 112
PR F+ + L++L SIK +G+++PLIV Y+IIAGERR+RAA++A + EVPV+
Sbjct: 63 QPRKQFDEDALQELADSIKQYGVLEPLIVTKKG-KFYEIIAGERRWRAARLAGVKEVPVV 121
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
IR ++ +EI+++EN+QR+DLNP+EEAL YE LI+EY TQ ++ V K+RS +AN
Sbjct: 122 IREYTDREIMEISLIENIQREDLNPIEEALAYESLINEYSLTQEEVAEKVSKNRSTIANS 181
Query: 173 LRILKLPSSVREMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQ 229
LR+LKL VR+MI +++++ GHAR L+ D A I K+SVRDTE +++
Sbjct: 182 LRLLKLCDEVRQMIIEDKLTTGHARALIPIEDAELQTEAANFIFDNKLSVRDTEIYIKKL 241
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKI 288
+ ++ K+ + + + D+E ++ +G I+IK +NN KG+ I Y + ++L+
Sbjct: 242 LSIPKESKENIVATNDLSIFYNDIESRLKDILGAKIAIKSKNNEKGKIEINYYSQDELER 301
Query: 289 ICSLL 293
I +L
Sbjct: 302 ITEML 306
>gi|260588832|ref|ZP_05854745.1| stage 0 sporulation protein J [Blautia hansenii DSM 20583]
gi|331083505|ref|ZP_08332617.1| hypothetical protein HMPREF0992_01541 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260540611|gb|EEX21180.1| stage 0 sporulation protein J [Blautia hansenii DSM 20583]
gi|330404198|gb|EGG83746.1| hypothetical protein HMPREF0992_01541 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 304
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 108/300 (36%), Positives = 176/300 (58%), Gaps = 13/300 (4%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPE-------KKTETIPESQDCISIHSIVPNPHNPRNYFE 59
K LGRGL A+I E + E S + + + PN PR F+
Sbjct: 5 KGGLGRGLDAMISETASKPRTTATATKKTVAPKEKKENSVLKVKLTQVEPNRKQPRKQFD 64
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ L +L +SIK G++QPL+V+ Y+IIAGERR+RA+K+A + EVPVI++ + +
Sbjct: 65 EDALLELAESIKQFGVLQPLLVKQKG-DYYEIIAGERRWRASKLAGIKEVPVIVKELTEQ 123
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++EI+++EN+QR++LNP+EEA Y +LI E+ Q+ I V KSR+ V N +R+LKL
Sbjct: 124 ETVEISLIENIQRENLNPIEEAAAYRRLIDEFHLKQDVIAERVSKSRTAVTNSMRLLKLD 183
Query: 180 SSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V++M+ +E IS GHAR L+ + A + +K++VR+TE+LV+E N K+
Sbjct: 184 ERVQQMLIEEMISTGHARALLAIEDKESQYAAAVKVFDEKLNVRETEKLVKEFLNPIPKK 243
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICSLLGE 295
++ + + + LE+KI +G ++I+ +NN KG+ I+Y + ++L+ I LL
Sbjct: 244 EEKVRDTAQ-DLVYEQLEEKIKGIIGSKVAIRRKNNNKGKIEIEYYSQDELERIVELLES 302
>gi|312142020|ref|YP_004009356.1| chromosome partitioning protein parb [Rhodococcus equi 103S]
gi|311891359|emb|CBH50680.1| chromosome partitioning protein ParB [Rhodococcus equi 103S]
Length = 383
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 87/281 (30%), Positives = 150/281 (53%), Gaps = 4/281 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
++ + + I I PNP PR+ F+ E L +L SI+ G++QP
Sbjct: 99 PTPAPAVRTDGEPLSPTGAVYHEIPPLQIQPNPKQPRSVFDEEALGELVHSIREFGLMQP 158
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR I Y+++ GERR+RA+++A L +P I+R + S L A++EN+ R LNPL
Sbjct: 159 IVVRRIGPEQYQLVMGERRWRASQLAGLETIPAIVRETTDDSMLRDALLENIHRVQLNPL 218
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ E+ T ++ S +G+SR V N++R+LKLP V+ + +S GHAR
Sbjct: 219 EEAAAYQQLLEEFEVTHEELASRIGRSRPVVTNMIRLLKLPIPVQRRVAAGVLSAGHARA 278
Query: 199 LVS----TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
L+S LA IV++ MSVR TEE V + + + + L D+
Sbjct: 279 LLSLEAGADAQEVLAARIVAEGMSVRATEEAVMLANREGPSPTPPVKRKPIQMPGLQDVA 338
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+++S+ +++ KG+ +++ + + L+ I ++ +
Sbjct: 339 ERLSNSFDTRVTVSLGKRKGKITVEFGSVDDLERIVKMMEQ 379
>gi|325677532|ref|ZP_08157196.1| chromosome partition ParA protein [Rhodococcus equi ATCC 33707]
gi|325551779|gb|EGD21477.1| chromosome partition ParA protein [Rhodococcus equi ATCC 33707]
Length = 383
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 87/281 (30%), Positives = 150/281 (53%), Gaps = 4/281 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
++ + + I I PNP PR+ F+ E L +L SI+ G++QP
Sbjct: 99 PTPAPAVRTDGEPLSPTGAVYHEIPPLQIQPNPKQPRSVFDEEALGELVHSIREFGLMQP 158
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR I Y+++ GERR+RA+++A L +P I+R + S L A++EN+ R LNPL
Sbjct: 159 IVVRRIGPEQYQLVMGERRWRASQLAGLETIPAIVRETTDDSMLRDALLENIHRVQLNPL 218
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ E+ T ++ S +G+SR V N++R+LKLP V+ + +S GHAR
Sbjct: 219 EEAAAYQQLLEEFEVTHEELASRIGRSRPVVTNMIRLLKLPIPVQRRVAAGVLSAGHARA 278
Query: 199 LVS----TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
L+S LA IV++ MSVR TEE V + + + + L D+
Sbjct: 279 LLSLEAGADAQEVLAARIVAEGMSVRATEEAVMLANREGPSPTPPVKRKPIQMPGLQDVA 338
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+++S+ +++ KG+ +++ + + L+ I ++ +
Sbjct: 339 ERLSNSFDTRVTVSLGKRKGKITVEFGSVDDLERIVKMMEQ 379
>gi|37681443|ref|NP_936052.1| parB family protein [Vibrio vulnificus YJ016]
gi|37200195|dbj|BAC96023.1| parB family protein [Vibrio vulnificus YJ016]
Length = 293
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 92/298 (30%), Positives = 174/298 (58%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSP----EKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + I++ + P + PR
Sbjct: 1 MSKRGLGKGLDALLSTSSLAREKQHIATQSQALSAEGELTDIAVGQLQPGVYQPRKDMSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L SI+S GIIQP++VR + +G ++IIAGERR+RAAK+A L VP +I++V++++
Sbjct: 61 QALEELTASIQSQGIIQPIVVRPVQDGHFEIIAGERRWRAAKLAGLKRVPCLIKHVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ L
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQDEFSLTHQQVADVIGKSRTAVSNLLRLNGLEL 180
Query: 181 SVREMIRKE--EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++ + ++ ++ A + + +AQ + SK ++VR TE+LV++ K
Sbjct: 181 EVKQFVAQKLLDMGHARALLALEGEQQVEVAQQVASKALTVRQTEQLVKK-----CLTPK 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ E ++ K++ + +K+S +G +S +++ N K + I + +L+ + + L
Sbjct: 236 VEEKNQSKDEETQQISQKLSETLGAKVSLVRNGNGKAKLTISIDEPHKLEQLIAKLES 293
>gi|326404878|ref|YP_004284960.1| chromosome partitioning protein ParB [Acidiphilium multivorum
AIU301]
gi|325051740|dbj|BAJ82078.1| chromosome partitioning protein ParB [Acidiphilium multivorum
AIU301]
Length = 292
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 106/295 (35%), Positives = 173/295 (58%), Gaps = 9/295 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS + RRLG+GLA L+G + E + + ++ P P PR +
Sbjct: 1 MSARETPRRLGKGLAELLG----PGTVAAAGQAAMGEGVRHVPVAALHPGPFQPRQAMDE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LE+L S+K+ G++QPL+VRA+ + Y+IIAGERR+RAA+ A L EVPV++R + +
Sbjct: 57 TALEELAASLKAQGVLQPLLVRAVPDKAGQYQIIAGERRWRAAQRAGLHEVPVLVRALSD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++ +VEN+QR+DL+P+EEA GY +L+ E+G Q ++ +V KSR HVAN++R+L L
Sbjct: 117 SDAMAAGLVENLQRQDLDPIEEAEGYRRLVEEFGLIQEELARVVAKSRPHVANMMRLLNL 176
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P+SV++ +R ++S GHAR L+ DP + A+ IV+K+++VR TE +V +
Sbjct: 177 PTSVQKALRGGDLSAGHARALLQHPDPEAAARAIVAKRLTVRQTEAMV---QAALVPKPG 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ LE ++++ +GL + + G + Y+ +QL I +LL
Sbjct: 234 RSRREATENSVTRSLETELTALLGLRVRVTFDGKGGSVSLAYQDLDQLDGILALL 288
>gi|303240064|ref|ZP_07326585.1| parB-like partition protein [Acetivibrio cellulolyticus CD2]
gi|302592333|gb|EFL62060.1| parB-like partition protein [Acetivibrio cellulolyticus CD2]
Length = 288
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 114/294 (38%), Positives = 178/294 (60%), Gaps = 18/294 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K+ LG+GL ALI N E + ++ I PN PR F+ E L
Sbjct: 1 MNKKGLGKGLGALISTAN----------EETENGIMELRVNEIEPNVGQPRKKFDDEKLI 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L SIK HGI+QP+IVR + +YKI+AGERR+RAA+MA L+ VPVI++++ NK +E+
Sbjct: 51 QLSDSIKQHGIVQPIIVRK-EENIYKIVAGERRWRAARMAGLTNVPVILKDISNKQVMEM 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEA YE+LI+EY TQ ++ +GK+RS +ANI+R+L L V+E
Sbjct: 110 ALIENIQREDLNPIEEAEAYERLINEYKMTQEELSKSIGKNRSTIANIIRLLALGEKVKE 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ EIS GHAR L+S D I+ K ++VRDTE LV++ +KK +
Sbjct: 170 YLINGEISSGHARALLSIEDKEMQEKVCSEIIEKNLNVRDTESLVKKLLA----QKKEVK 225
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+++ + +E ++ +G + + + N KG+ I+Y +N++L+ I + +
Sbjct: 226 KVINEDENIVQIEDELKKILGTKVKLFNNNKKGKIMIEYYSNDELERILDIFKK 279
>gi|297539951|ref|YP_003675720.1| parB-like partition protein [Methylotenera sp. 301]
gi|297259298|gb|ADI31143.1| parB-like partition protein [Methylotenera sp. 301]
Length = 296
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 104/303 (34%), Positives = 169/303 (55%), Gaps = 17/303 (5%)
Query: 1 MSNNYS-KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ R LGRGL +L+ S+ + S + + + + PR+Y +
Sbjct: 1 MAKLKGLNRGLGRGLDSLLAGDMGSVGEAD--------SLLVLKVEQLQSGKYQPRSYMD 52
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAI-----DNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
L+ L SIKS GI+QP++VR I D+ Y+IIAGERR+RA++MA L EVPV++R
Sbjct: 53 DAALQTLAASIKSQGIMQPILVRHIPNEHGDDDHYEIIAGERRWRASQMAGLEEVPVLVR 112
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+ ++++L +A++EN+QR++LNPLEEA G ++LI E+ T + VG+SR V+N+LR
Sbjct: 113 EIADEAALAMALIENIQRENLNPLEEAQGIKRLIDEFEMTHEKAAAAVGRSRVAVSNLLR 172
Query: 175 ILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
+L L + V++M+ ++ +GHAR L+ + + LA IV +SVR+ E LV+ +
Sbjct: 173 LLTLCAPVQDMLMHGKLDMGHARALIGLDGAQQVMLATQIVQDNLSVREVESLVKNLEAT 232
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICS 291
+ + + L++ +S K+G +SIK G I Y +QL I S
Sbjct: 233 SIEAPQKQIQKTHINPDVLRLQEALSDKLGATVSIKADAKGAGTLKISYANLDQLDEIVS 292
Query: 292 LLG 294
+
Sbjct: 293 RIS 295
>gi|118443024|ref|YP_876984.1| stage 0 sporulation protein J [Clostridium novyi NT]
gi|118133480|gb|ABK60524.1| Stage 0 sporulation protein J [Clostridium novyi NT]
Length = 281
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 97/289 (33%), Positives = 150/289 (51%), Gaps = 11/289 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E S I ++ I PN PR F+ +
Sbjct: 3 KKFGLGKGLGALIPEEPNEE----------KNSILKIDMNLIKPNIDQPRKNFDEAKIIQ 52
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK HGIIQPLI++ N I AGERR+RAAK L EVP +I + +K LE++
Sbjct: 53 LADSIKEHGIIQPLILQKRGNIYSII-AGERRWRAAKKVGLKEVPAVINELSDKQILEVS 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEA+ Y++LI E+ TQ ++ +GKSR+ + N +R+L L S V++
Sbjct: 112 LIENIQREDLNPIEEAIAYKKLIDEFKLTQEELSKQIGKSRTAITNCMRLLNLDSRVQDY 171
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ I+ GH R L+S D ++ + + N K+K E
Sbjct: 172 LIDGVITEGHGRALLSLEDKEMQYKMALDIIDKELSVRQTESIIKNFKKKSINKKEDDAN 231
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ Y +E K+ + + ++ + N+G+ I+Y + E L+ I +L
Sbjct: 232 IKPYYNAIENKLENLFNTKVVLRSKGNRGKIQIEYYSEEDLQRIIDILK 280
>gi|90421005|ref|ZP_01228909.1| chromosome partitioning protein ParB [Aurantimonas manganoxydans
SI85-9A1]
gi|90334783|gb|EAS48559.1| chromosome partitioning protein ParB [Aurantimonas manganoxydans
SI85-9A1]
Length = 328
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 134/312 (42%), Positives = 196/312 (62%), Gaps = 19/312 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP--------EKKTETIPESQDCISIHSIVPNPH 52
M+ + S++RLGRGLA+LIG + P E+ ++ I I +I PNP+
Sbjct: 1 MNEDKSRQRLGRGLASLIGAGASAPARPGQGFGAQAEQPAPPAIPAERHIPIDAISPNPN 60
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVP 110
NPR F L+DL S+++HG++QPL+VR ++I+AGERR+RAA+ A L+EVP
Sbjct: 61 NPRRTFHEADLDDLTASVRNHGVVQPLLVRPRPGVPDGFEIVAGERRWRAARAAGLTEVP 120
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
V++R + ++ SLEIAI+ENVQR DLN +EEALGYE LI+E+GYTQ D+ ++GKSRSHVA
Sbjct: 121 VVMREIGDRQSLEIAIIENVQRADLNAVEEALGYEMLINEHGYTQADLADVLGKSRSHVA 180
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE-- 228
N LR+LKLP VR M+ +S G ART+V+ DP+S+A+ IVS+ +SVR+ EEL ++
Sbjct: 181 NTLRLLKLPEEVRTMVASGTLSPGAARTVVTAEDPVSVAKQIVSRGLSVREAEELARQPA 240
Query: 229 -------QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYE 281
+ + K + + EK+ LE+ ++ +G+ + I + G I+Y
Sbjct: 241 TGETAKPRKSSGGKSQPKAAPAPEKDSDALALERLLAELLGMPVEIDVKGEGGSIRIEYA 300
Query: 282 TNEQLKIICSLL 293
EQL IC LL
Sbjct: 301 DLEQLDEICGLL 312
>gi|159040584|ref|YP_001539837.1| parB-like partition protein [Salinispora arenicola CNS-205]
gi|157919419|gb|ABW00847.1| parB-like partition protein [Salinispora arenicola CNS-205]
Length = 335
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 88/270 (32%), Positives = 155/270 (57%), Gaps = 4/270 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
E + IS+ +IVPNP PR F+ + LE+L SI++ G +QP++VR +D+
Sbjct: 58 ESLSPVPGARFAEISVDAIVPNPKQPRQVFDEDALEELKVSIQAVGFLQPIVVRQLDDEK 117
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
++++ GERR+RAA+ S +P I+R+ + + L A++EN+ R +LNPLEEA Y+QL+
Sbjct: 118 FELVMGERRWRAAQAVGRSSIPAIVRDTRDDAMLRDALLENIHRANLNPLEEAAAYQQLL 177
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDP 205
E+G T ++ +G+SR ++N +R+L LP+ V+ + +S GHAR L+ +
Sbjct: 178 DEFGATHEELARRIGRSRPQISNTIRLLNLPAQVQRRVAAGVLSAGHARALLSLDDSEAQ 237
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKE-KRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
LA IV++ +SVR TEE+V + ++ + LTDL ++S +
Sbjct: 238 EQLAHRIVAEGLSVRATEEVVALSLGESTGAKEAPKRRPKPHAPALTDLADRLSDRFDTR 297
Query: 265 ISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + +KG+ I++ + + L+ I ++G
Sbjct: 298 VKVDIGRSKGKITIEFGSVDDLERIVDIIG 327
>gi|323699675|ref|ZP_08111587.1| parB-like partition protein [Desulfovibrio sp. ND132]
gi|323459607|gb|EGB15472.1| parB-like partition protein [Desulfovibrio desulfuricans ND132]
Length = 305
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 104/301 (34%), Positives = 164/301 (54%), Gaps = 19/301 (6%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
R LGRGL AL+G V ++K I + +I PNPH PR F E L DL
Sbjct: 6 RGLGRGLDALLGGV-----REDEKVTADAAEVRLIPVGAITPNPHQPRREFSEEALNDLA 60
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SI++ G++QP++VR + G Y+++AGERR RA++ A L+++P ++R + ++ SL IA++
Sbjct: 61 ASIETRGVLQPILVRPLGKGKYELVAGERRLRASRKAGLTDIPSLVREMTDQESLAIALI 120
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLN +EEALGY++L E+G +Q ++ VGKSRS VAN LR+L LP SV+ I+
Sbjct: 121 ENLQREDLNAVEEALGYQRLQQEFGLSQEELARQVGKSRSAVANSLRLLNLPESVQTAIQ 180
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNK-----------K 233
+ +S GH R +++ S P A++ ++VR E
Sbjct: 181 QNVLSAGHGRAIMAVSAPEPQAELHRRIAENGLTVRQAEAQASFFKQHGRLPGADEIGAA 240
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ R + L L+ ++S +GL + I KG+ + Y + L+ +
Sbjct: 241 PSSRSAKSEPRPLDPRLETLQGELSDLLGLTVKISGSPEKGKLTVSYAAEDDLRSVAERF 300
Query: 294 G 294
G
Sbjct: 301 G 301
>gi|78189760|ref|YP_380098.1| ParB-like partition protein [Chlorobium chlorochromatii CaD3]
gi|78171959|gb|ABB29055.1| chromosome segregation DNA-binding protein [Chlorobium
chlorochromatii CaD3]
Length = 303
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 96/301 (31%), Positives = 168/301 (55%), Gaps = 16/301 (5%)
Query: 5 YSKRRLGRGLAALIGEV----NQSIDSPEKKTETIPESQDCI---SIHSIVPNPHNPRNY 57
K+ LGRGL ALI + Q + P + + + P + I + I NP PR
Sbjct: 4 MQKKGLGRGLKALIPDELMPDEQVVVQPPETSPSEPATVGSICSLPVEKIHANPFQPRKE 63
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-V 116
F++ LE+L SI +G+IQP+ V +Y++++GERR RA +A +P +
Sbjct: 64 FDATALEELKNSIIENGVIQPITVWRNG-DIYQLVSGERRLRAVTLAGFKFIPAYLIEAP 122
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++ + +E+A++EN+QR+DLN +E AL + L + + ++ VGK+RS ++N+LR+L
Sbjct: 123 EDSAQIEMALIENIQREDLNAIEVALALKSLTTRCNLSHEEVARKVGKNRSTISNLLRLL 182
Query: 177 KLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
KLP S++E IR +IS GHAR L + L + + I+S+++SVR TE LV N
Sbjct: 183 KLPLSIQESIRNHDISSGHARALINLPTEQQQLKVWKQILSQQLSVRQTEALVNRLAN-- 240
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSL 292
++++ + RE+ L LE + + + I + ++ KG+ I+Y +++ L+ +
Sbjct: 241 -EQEQSTQPPRERATRLAALEAYLRDNLATKVKIVEKKDGKGEIHIQYFSHDDLERLLEF 299
Query: 293 L 293
+
Sbjct: 300 M 300
>gi|300780165|ref|ZP_07090021.1| plasmid partition ParA protein [Corynebacterium genitalium ATCC
33030]
gi|300534275|gb|EFK55334.1| plasmid partition ParA protein [Corynebacterium genitalium ATCC
33030]
Length = 336
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 95/334 (28%), Positives = 157/334 (47%), Gaps = 42/334 (12%)
Query: 1 MS---NNYSKRRLGRGLAALIGE----------------------------------VNQ 23
M+ +K LG+GLAALI +
Sbjct: 1 MAEQPKKNNKGGLGKGLAALIPSNADHHQKTGPLGDGAADVIIGKKDAPKRLKGAPSIPA 60
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ ++I S I I I PN PR+ F+ + L +L SIK G++QP++VR
Sbjct: 61 PVAPTATVADSIGASYQEIPIGDIFPNAKQPRSVFDEDELAELVHSIKEFGLLQPVVVRP 120
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
+++I GERR+RA A L +P I+R+ ++ L A++EN+ R LNPLEEA
Sbjct: 121 -AADGFELIMGERRWRAGSKAGLKRIPAIVRDTSDEDMLRDALLENIHRVQLNPLEEAAA 179
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---- 199
Y+QL+ E+G TQ + +G+SR + N +R+L LP V+ + +S GHAR L
Sbjct: 180 YQQLLEEFGVTQEQLADRLGRSRPVITNSIRLLNLPVPVQRRVAAGVLSAGHARALLGVK 239
Query: 200 VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS 259
V LA IV++ +SVR TEE V + +K + ++L+ ++++
Sbjct: 240 VGPEAQEQLADRIVAEGLSVRATEEAVTLLNKNGAMPEKTKREPAPQPEFLSQAAERLAD 299
Query: 260 KVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +S+ KG+ +++ + + I L+
Sbjct: 300 EWDTKVSVTMGKRKGKIVVEFGDRDDFERIMGLI 333
>gi|83746956|ref|ZP_00944002.1| ParB [Ralstonia solanacearum UW551]
gi|207744820|ref|YP_002261212.1| chromosome partitioning protein parb [Ralstonia solanacearum
IPO1609]
gi|83726376|gb|EAP73508.1| ParB [Ralstonia solanacearum UW551]
gi|206596230|emb|CAQ63157.1| chromosome partitioning protein parb [Ralstonia solanacearum
IPO1609]
Length = 303
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 99/300 (33%), Positives = 183/300 (61%), Gaps = 14/300 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + +++ ++ + + + + P + PR +
Sbjct: 1 MST-IKKKGLGRGLEALLGSPAEIVEAARQE-----GAPTVLKLDQMQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN----GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI++ G++QP++VR +++ Y+IIAGERRFRA+++A L+EVPV++++V
Sbjct: 55 GALQELAASIRAQGLMQPILVRKVESDGTAQKYEIIAGERRFRASRLAGLTEVPVLVKDV 114
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++++ +A++EN+QR+DLNPLEEA G +LI E+ +T +G+SRS V+N+LR+L
Sbjct: 115 PDQAAAAMALIENIQREDLNPLEEAQGIARLIREFQFTHEQAAESLGRSRSAVSNLLRLL 174
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ M+ ++ +GHAR L V + ++LA IV+K++SVR+TE+LV E
Sbjct: 175 NLAQPVQTMLMAGDLDMGHARALLAVDGATQITLANQIVNKRLSVRETEKLVASTLKPFE 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + + + + +T L + ++ +GL + IK +GQ +++ + ++ + + L
Sbjct: 235 LKSQRQKSGQNG-RDVTRLAEDLADSLGLPVQIKLAAKGRGQLVVQFGSLDEFDGLLARL 293
>gi|260171836|ref|ZP_05758248.1| putative chromosome partitioning protein parB [Bacteroides sp. D2]
gi|315920148|ref|ZP_07916388.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694023|gb|EFS30858.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 296
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 91/299 (30%), Positives = 156/299 (52%), Gaps = 16/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ S + S + I + I NP+ PR F+
Sbjct: 1 MAT-QKRNALGRGLDALL--------SMDDVKTEGSSSINEIELAKITVNPNQPRREFDE 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R + + Y+IIAGERR+RA++ A L +P IR D+++
Sbjct: 52 TALQELADSIAEIGIIQPITLRKLSDDEYQIIAGERRYRASQRAGLKTIPAYIRTADDEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ L+ +Y TQ + +GK R+ +AN LR+LKLP+
Sbjct: 112 MMEMALIENIQREDLNAVEIALAYQHLLDQYELTQERLSERIGKKRTTIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
++ ++ +++ +GHAR L+S Q V + + + E + K
Sbjct: 172 PIQMALQNKQLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKS 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+KI + + L++++S + + KG+ I + E+L+ I +
Sbjct: 232 GTRKITPKRAKLPEEFNLLKQQLSGFFNTKVQLTCSEKGKGKISIPFGNEEELERIMEI 290
>gi|189501006|ref|YP_001960476.1| parB-like partition protein [Chlorobium phaeobacteroides BS1]
gi|189496447|gb|ACE04995.1| parB-like partition protein [Chlorobium phaeobacteroides BS1]
Length = 292
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 91/295 (30%), Positives = 162/295 (54%), Gaps = 11/295 (3%)
Query: 5 YSKRRLGRGLAALIGEVN-QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+K+ LG+GL ALI + ++ + + + + + + NP PR F+ L
Sbjct: 1 MTKKALGKGLKALIPDEGFVPLNKTDNDSRSHAGFIGSLPVEKVRVNPFQPRKDFDENAL 60
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSL 122
E+L SI +G+IQ + + D Y++I+GERR RA + A +P I ++ L
Sbjct: 61 EELKNSILENGVIQ-PVTVSRDGDGYQLISGERRLRAVRKAGFKFIPGYIIEAGEDAGKL 119
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR+DLN +E A+ + L++ TQ++I VGK+RS ++N LR+LKLP+S+
Sbjct: 120 EMALIENIQREDLNAIEIAIALKSLVTTCNLTQDEIAQKVGKNRSTISNFLRLLKLPASI 179
Query: 183 REMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+E IR+++IS GHAR L + + + ++I+ K+SVR TE+LV N+ + +
Sbjct: 180 QESIRQKKISSGHARALINLPNQKQQVKVWKLIIRNKLSVRQTEDLV----NRMFRDEPK 235
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+ LE ++ + + I + KG+ I+Y + + L+ I ++
Sbjct: 236 PAIKDRASDDFSHLESRLRDRFATKVRIVEKNKGKGEIHIQYFSPDDLERILDIM 290
>gi|329938646|ref|ZP_08288042.1| chromosome partitioning nuclease [Streptomyces griseoaurantiacus
M045]
gi|329302137|gb|EGG46029.1| chromosome partitioning nuclease [Streptomyces griseoaurantiacus
M045]
Length = 322
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 154/299 (51%), Gaps = 14/299 (4%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
G GL AL + +P+ + + SIVPNPH PR+ F+ + L +L SI
Sbjct: 7 GAGLGAL--PHAEEAAAPKMPGPPFGAHFAELPLDSIVPNPHQPRSVFDPDALAELITSI 64
Query: 71 KSHGIIQPLIVRAIDNGLYKIIA------GERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
K G++QP++VR + G Y+ A GERR+RA A L+ +P I+R D++ L
Sbjct: 65 KEVGLLQPVVVRQVGRGKYEPPAEYELIMGERRWRACHEAGLTAIPAIVRATDDEKLLLD 124
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+ R LNPLEEA Y+QL+ ++ T + + +G+SR V+N LR+LKL V+
Sbjct: 125 ALLENLHRAQLNPLEEAAAYDQLLQDFNCTHDQLADRIGRSRPQVSNTLRLLKLSPKVQS 184
Query: 185 MIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ +S GHAR L+ + + LA +V++ +SVR TEE+V K +
Sbjct: 185 RVAAGVLSAGHARALLSVDDSEEQDRLAHRVVAEGLSVRATEEIVALMTGTAPKPTARAK 244
Query: 242 GSRE---KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
R L DL ++S + + + KG+ +++ + E L+ I L +
Sbjct: 245 KPRAGSLVSPALGDLATRLSDRFETRVKVDLGQKKGKITVEFASMEDLQRILESLAPGE 303
>gi|315223448|ref|ZP_07865305.1| chromosome partitioning protein SpoOJ [Capnocytophaga ochracea
F0287]
gi|314946621|gb|EFS98612.1| chromosome partitioning protein SpoOJ [Capnocytophaga ochracea
F0287]
Length = 310
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 109/310 (35%), Positives = 166/310 (53%), Gaps = 12/310 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI--DSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ K LGRG++A+ G + +K + I + + + I NP PR F
Sbjct: 1 MTRPAKKPALGRGISAIFGNSPEVAINSIKDKNADKIVGNIIELELDLIETNPFQPRTSF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAID-NGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L+ L SI+ G++QP+ VR +D Y++I+GERRFRA+K+A L +P IR D
Sbjct: 61 NEEELQGLASSIEELGVVQPITVRKLDGENKYQLISGERRFRASKLAGLKTIPAYIRIAD 120
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ SL +A+VEN+QR+DL+P+E AL Y+QLI + TQ+ + VGK RS + N LR+LK
Sbjct: 121 DNESLTMALVENIQRQDLDPIEIALSYQQLIEQVNLTQDQMSKRVGKKRSTITNYLRLLK 180
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKE 234
L ++ IR IS+GH R +++ +P A+V +SVRDTEELV+ N +
Sbjct: 181 LAPIIQTGIRDGFISMGHGRAIIAIENPEQQAEVYQRIISDNLSVRDTEELVRRLQNSET 240
Query: 235 K-----RKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKI 288
+ E Y+ + + G +++K +N KG I + + E K
Sbjct: 241 PNVVSIQIPKSNSKTEVPTYIKENMSSFNHFFGTKVTVKMSKNGKGSLTIPFSSEEDFKR 300
Query: 289 ICSLLGENDF 298
I SLL + D
Sbjct: 301 IQSLLHKKDE 310
>gi|213963882|ref|ZP_03392129.1| spoOJ protein [Capnocytophaga sputigena Capno]
gi|213953472|gb|EEB64807.1| spoOJ protein [Capnocytophaga sputigena Capno]
Length = 310
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 108/310 (34%), Positives = 163/310 (52%), Gaps = 12/310 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI--DSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ K LGRG++A+ G + +K + I + + + I NP PR F
Sbjct: 1 MTKPAKKPALGRGISAIFGNSPEVAINSIKDKNADKIVGNIIELELDLIETNPFQPRTSF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAID-NGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L+ L SI+ G++QP+ VR +D Y++I+GERRFRA+K+A L +P IR D
Sbjct: 61 NEEELQGLASSIEELGVVQPITVRKLDGENKYQLISGERRFRASKLAGLKTIPAYIRIAD 120
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ SL +A+VEN+QR+DL+P+E AL Y+QLI + TQ+ + VGK RS + N LR+LK
Sbjct: 121 DNESLTMALVENIQRQDLDPIEIALSYQQLIEQVNLTQDQMSKRVGKKRSTITNYLRLLK 180
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKE 234
L ++ IR IS+GH R +++ P A+V +SVRDTEELV+ N +
Sbjct: 181 LAPIIQTGIRDGFISMGHGRAIIAIEAPEQQAEVYQRIISDNLSVRDTEELVRRLQNPET 240
Query: 235 K-----RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKI 288
+ E Y+ + + G +++K KG I + + E K
Sbjct: 241 PNVVSIQIPKSNSKTEVPTYIKENMSSFNHFFGTKVAVKMSKDGKGSLTIPFTSEEDFKR 300
Query: 289 ICSLLGENDF 298
I SLL + D
Sbjct: 301 IQSLLHKKDE 310
>gi|319901118|ref|YP_004160846.1| chromosome segregation DNA-binding protein [Bacteroides helcogenes
P 36-108]
gi|319416149|gb|ADV43260.1| chromosome segregation DNA-binding protein [Bacteroides helcogenes
P 36-108]
Length = 296
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 97/301 (32%), Positives = 160/301 (53%), Gaps = 18/301 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ S ++ S + I + I NP+ PR F+
Sbjct: 1 MA--QKRNALGRGLDALL--------SMDEVQTEGSSSINEIELSKITVNPNQPRREFDR 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L SI GIIQP+ +R +D+ Y+IIAGERRFRA+++A L +P IR D++
Sbjct: 51 TALQELADSIAEIGIIQPVTLRKLDSGDEYQIIAGERRFRASQLAGLKSIPAYIRTADDE 110
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+ +E+A++EN+QR+DLN +E AL Y+ L+ +YG TQ + VGK R+ +AN LR+LKLP
Sbjct: 111 NVMEMALIENIQREDLNSVEIALAYQHLLEQYGLTQERLSERVGKKRTTIANYLRLLKLP 170
Query: 180 SSVREMIRKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
+ V+ ++ ++I +GHAR LV+ V + + + E + K
Sbjct: 171 APVQIGLQNKQIDMGHARALVTLGDPKLQVRIYEEILEHGYSVRKVEEIVKSLSEGETIK 230
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+KI + + L++++S + + KG+ I + E+L+ I +
Sbjct: 231 SGSRKIAPKRAKLPEEFNMLKQQLSGFFDTKVQLTCSEKGKGKISIPFGNEEELERIIGI 290
Query: 293 L 293
L
Sbjct: 291 L 291
>gi|188587514|ref|YP_001919059.1| parB-like partition protein [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179352201|gb|ACB86471.1| parB-like partition protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 283
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 105/291 (36%), Positives = 170/291 (58%), Gaps = 8/291 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SK+RLG+GL ALI E+ E+ T+ E ++ + I + PNPH PR F E LE
Sbjct: 1 MSKKRLGKGLDALIPELK------EEPTKEQSEQREELPIEQLEPNPHQPRKEFSDEALE 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SIK+HG+IQP+IV N + AGERR+RAAK A L+ +P II++ ++I
Sbjct: 55 ELANSIKAHGVIQPIIVVPQGNKYVIV-AGERRYRAAKQADLATIPAIIKDFSETQMMQI 113
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+++ ++LI E+G TQN + +G RS +ANILRIL+L V
Sbjct: 114 ALLENIQREDLNPIDKGEALKKLIDEHGLTQNQLSKELGIGRSSLANILRILQLEPKVSN 173
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
M+RK ++ GHAR L+S + + E ++ + +K K+ +
Sbjct: 174 MVRKGVLTEGHARALLSLKGDEQIQLAEEISQKGFS-VRETEKKVKDLLKKDKEKPKRDS 232
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
K+ ++ D+E+K++ ++G + I KG+ I++ +N+ L+ + LL +
Sbjct: 233 SKDPFINDIEEKLAQRLGTKVQINKGKKKGKIEIEFISNDDLEKLIELLSK 283
>gi|281420556|ref|ZP_06251555.1| spoOJ protein [Prevotella copri DSM 18205]
gi|281405329|gb|EFB36009.1| spoOJ protein [Prevotella copri DSM 18205]
Length = 311
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 108/297 (36%), Positives = 168/297 (56%), Gaps = 14/297 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+N LGRGL ALI S E + + IS+ I NP+ PR F+ E
Sbjct: 16 NNGTKSNALGRGLDALI--------STEGVRTQGSSTINEISLDQIEANPNQPRREFDDE 67
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L +L +SIK+ GIIQP+ +R + ++IIAGERR+RA+++A L+ +P IR + +++
Sbjct: 68 ALHELAESIKAIGIIQPITLRQVSENRFQIIAGERRWRASQLAGLTAIPAYIRTISDENV 127
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L+ G TQ I VGKSR+ +AN LR+LKLP+
Sbjct: 128 MEMALVENIQRQDLNAIEIALAYEHLLENEGMTQEKISERVGKSRAAIANYLRLLKLPAQ 187
Query: 182 VREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR-- 236
V+ ++K+EI +GH R L+ S S + L + I SVR EE+VQ + ++
Sbjct: 188 VQMALQKKEIDMGHCRALLALDSPSLQIKLFKEIQKNGYSVRKVEEMVQRLKSGEDIESG 247
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
KK + + T L+ ++S + + KG+ I + E+L+ I ++
Sbjct: 248 KKTITAKAQMPEEFTQLKNRLSQFLNTKVQFTCSAKGKGKISIPFANEEELEHIMNV 304
>gi|152977678|ref|YP_001377195.1| parB-like partition protein [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152026430|gb|ABS24200.1| parB-like partition protein [Bacillus cytotoxicus NVH 391-98]
Length = 283
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 103/294 (35%), Positives = 171/294 (58%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ A +++ + E+ I++ + PNP+ PR F E +++L
Sbjct: 3 KGLGRGINAFFPDLDVKEE----------ETIQEIAVTELRPNPYQPRKNFHKEAIQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A+L +VPV++R + + +E+A++
Sbjct: 53 ISIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEANLEKVPVVVRKLSEQQMMELALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLTLPSFVQDMIA 171
Query: 188 KEEISLGHARTLVSTSDPLS---LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H RTL++ D L + I + ++VR E++VQE + ++ + +
Sbjct: 172 SGKLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQ--RVSRETKKKKK 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G + IK + KG+ I++ E L I LL +
Sbjct: 230 ERNIFFIERETILREKFGTEVKIKETKKEKGKIEIEFFNKEDLNRILELLSGGN 283
>gi|325265454|ref|ZP_08132177.1| stage 0 sporulation protein J [Clostridium sp. D5]
gi|324029312|gb|EGB90604.1| stage 0 sporulation protein J [Clostridium sp. D5]
Length = 307
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 181/305 (59%), Gaps = 18/305 (5%)
Query: 3 NNYSKRRLGRGLAALIGEVN----------QSIDSPEKKTETIPESQDCISIHSIVPNPH 52
+ LG+GL +LI + + +I PEKK + + + I+ + PN
Sbjct: 1 MAVKRNGLGKGLDSLIPDKSEKTVKKPLKQDNIIQPEKKEKVNESGEMLVKINQVEPNRE 60
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI 112
PR F+ + L +L SIK G++QPL+V+ Y+IIAGERR+RAAK+A L E+PVI
Sbjct: 61 QPRKDFDEDALLELADSIKQFGVLQPLVVQK-KKDYYEIIAGERRWRAAKLAGLKEIPVI 119
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
I++ + +EI+++EN+QR++LNP+EEA+ Y++L+ E+ Q+++ V KSR+ V N
Sbjct: 120 IKSYTEQEIVEISLIENIQRENLNPIEEAMAYKRLLEEFSLKQDEVAERVSKSRTAVTNS 179
Query: 173 LRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
+R+LKL V++MI + I+ GHAR L+ LA I +K+SVR+TE+LV+
Sbjct: 180 MRLLKLSERVQQMIVDDMITTGHARALLAIDDEEQQYMLANKIFDEKLSVRETEKLVKAL 239
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKI 288
N K+++ E+ +LE+K+ + +G +++ + N KG+ I+Y + ++L+
Sbjct: 240 KNPKKEQ---KIEKVERTFIYDNLEEKMKNIIGTKVNVNPKSNGKGRIEIEYYSEDELER 296
Query: 289 ICSLL 293
I L+
Sbjct: 297 IFDLI 301
>gi|328461972|gb|EGF34167.1| ParB-like partition protein [Lactobacillus rhamnosus MTCC 5462]
Length = 284
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 94/280 (33%), Positives = 151/280 (53%), Gaps = 10/280 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+N SK LGRG+ A+ + E + + + + + I PNP+ PR F+
Sbjct: 1 MANKNSK-GLGRGIDAIFKDF-------ESPDLSANNTVEELPLVDIRPNPYQPRKTFDQ 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
EGL++L SIK G+ QP+IVR Y+II GERRFRA+K+A +P I+R+ ++
Sbjct: 53 EGLKELADSIKQTGVFQPIIVRK-SVSGYEIITGERRFRASKLADKETIPAIVRDFNDPE 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DL PL+EA Y+ LI TQ ++ + +GKSR ++AN LR+L LP
Sbjct: 112 MMEIAVLENLQREDLTPLDEAQAYDTLIKRLNLTQAEVSARLGKSRPYIANYLRLLTLPQ 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V++M+ ++S+G ARTL+S D + V +L + + +
Sbjct: 172 PVKQMLSANQLSMGQARTLLSLKDKTKMVAVAKKTISENLTVRQLERFINQMNAGTNRPA 231
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIK 279
+ K Y+ E ++ + G ++I KG+ I
Sbjct: 232 TKEKPKSPYVRATENQLGERFGTKVNINEGSKGKGKIEID 271
>gi|207722124|ref|YP_002252562.1| chromosome partitioning protein parb [Ralstonia solanacearum MolK2]
gi|206587298|emb|CAQ17882.1| chromosome partitioning protein parb [Ralstonia solanacearum MolK2]
Length = 303
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 99/300 (33%), Positives = 183/300 (61%), Gaps = 14/300 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + +++ ++ + + + + P + PR +
Sbjct: 1 MST-LKKKGLGRGLEALLGSPAEIVEAARQE-----GAPTVLKLDQMQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN----GLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L++L SI++ G++QP++VR +++ Y+IIAGERRFRA+++A L+EVPV++++V
Sbjct: 55 GALQELAASIRAQGLMQPILVRKVESDGTAQKYEIIAGERRFRASRLAGLTEVPVLVKDV 114
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++++ +A++EN+QR+DLNPLEEA G +LI E+ +T +G+SRS V+N+LR+L
Sbjct: 115 PDQAAAAMALIENIQREDLNPLEEAQGIARLIREFQFTHEQAAESLGRSRSAVSNLLRLL 174
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ M+ ++ +GHAR L V + ++LA IV+K++SVR+TE+LV E
Sbjct: 175 NLAQPVQTMLMAGDLDMGHARALLAVDGATQITLANQIVNKRLSVRETEKLVASTLKPFE 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLL 293
+ + + + + +T L + ++ +GL + IK +GQ +++ + ++ + + L
Sbjct: 235 LKSQRQKSGQNG-RDVTRLAEDLADSLGLPVQIKLAAKGRGQLVVQFGSLDEFDGLLARL 293
>gi|290959012|ref|YP_003490194.1| chromosome partitioning nuclease [Streptomyces scabiei 87.22]
gi|260648538|emb|CBG71649.1| putative chromosome partitioning nuclease [Streptomyces scabiei
87.22]
Length = 317
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 90/283 (31%), Positives = 149/283 (52%), Gaps = 5/283 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + E+ + + + SI PNP PR F+ + L++L SIK G++QP+
Sbjct: 17 EEASPNGAAERPAAPVGAYFAELPLDSITPNPRQPREVFDEDLLQELVTSIKEVGLLQPI 76
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + Y++I GERR+RA A L +P I+R D++ L A++EN+ R LNPLE
Sbjct: 77 VVRQVGPARYELIMGERRWRACHEAQLEAIPAIVRATDDEKLLLDALLENLHRAQLNPLE 136
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+QL+ ++ T + + +G+SR V+N LR+LKL +V+ + +S GHAR L
Sbjct: 137 EAFAYDQLLKDFNCTHDQLADRIGRSRPQVSNTLRLLKLSPAVQRRVAAGVLSAGHARAL 196
Query: 200 V---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE--KRKKIFEGSREKEKYLTDLE 254
+ + + LA IV++ +SVR EE+V + + R K L +L
Sbjct: 197 LSVEDSEEQDKLAHRIVAEGLSVRAVEEIVTLMGSHPKASTRSKGPRAGSVPSPALGELA 256
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + I KG+ +++ + E L+ I S L +
Sbjct: 257 TRLSDRFETRVKIDLGQKKGKITVEFASTEDLERILSTLAPGE 299
>gi|317505223|ref|ZP_07963155.1| chromosome partitioning protein SpoOJ [Prevotella salivae DSM
15606]
gi|315663652|gb|EFV03387.1| chromosome partitioning protein SpoOJ [Prevotella salivae DSM
15606]
Length = 296
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 103/301 (34%), Positives = 167/301 (55%), Gaps = 14/301 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI S + + + I+I I NP+ PR F+
Sbjct: 1 MAVHKKYNSLGRGLDALI--------STDAVRTQGSSTINEIAIDQIEANPNQPRREFDD 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SI+ GIIQP+ +R ++IIAGERR+RA+++A L +P IR + +++
Sbjct: 53 EALQELAHSIREIGIIQPITLRQTAENRFQIIAGERRWRASQLAGLKAIPAYIRTIKDEN 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A+VEN+QR+DLN +E AL YE L+ G TQ + +GKSR+ + N LR+LKLP+
Sbjct: 113 VMEMALVENIQREDLNAIEIALAYEHLLEGSGMTQEKVSERIGKSRTAITNYLRLLKLPA 172
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ ++K+EI +GHAR L+ S + + L + I+ SVR EELVQ N +
Sbjct: 173 QVQMALQKKEIDMGHARALLALDSPALQIKLFKEILKNGYSVRKVEELVQALKNGDDIES 232
Query: 238 KIFE--GSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ + + +L +++S + + + KG+ CI + +L+ I +L
Sbjct: 233 GKKKIIARNQLPEEFCELRNQLASFLNTKVQMTCSPKGKGKICIPFANEAELERIMNLFD 292
Query: 295 E 295
+
Sbjct: 293 K 293
>gi|209515784|ref|ZP_03264647.1| parB-like partition protein [Burkholderia sp. H160]
gi|209503811|gb|EEA03804.1| parB-like partition protein [Burkholderia sp. H160]
Length = 295
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 101/296 (34%), Positives = 173/296 (58%), Gaps = 10/296 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL AL+G ++ I + + + + + + PR +
Sbjct: 1 MNAVARKKGLGRGLEALLGGTADITEAV-----VIDGAPNVLPLAKMQAGKYQPRTRMDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI++ G++QP++VR I Y+IIAGERRFRAA++A L EVPV++++V +++
Sbjct: 56 GALQELAASIRAQGLMQPILVRPIAADRYEIIAGERRFRAARIAGLDEVPVLVKDVPDQA 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+ +T VG+SRS V+N+LR+L L +
Sbjct: 116 AAAMALIENIQREDLNPLEEAQGIQRLLDEFDFTHEQAAESVGRSRSAVSNLLRLLNLAT 175
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + ++LA +V+K++SVR+TE+LV K
Sbjct: 176 PVQTMLLAGDLDMGHARALLAVDAATQITLANQVVNKRLSVRETEKLVAMTTKVTPAVKA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
++ LE+++S + + IK R +GQ + + + L+ I L
Sbjct: 236 RANPDGGRD--TRRLEEELSDLLSATVKIKLGRRGRGQVLVDFGDLDALEGILVRL 289
>gi|160886807|ref|ZP_02067810.1| hypothetical protein BACOVA_04820 [Bacteroides ovatus ATCC 8483]
gi|237714473|ref|ZP_04544954.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|237719256|ref|ZP_04549737.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|262408305|ref|ZP_06084852.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|293372250|ref|ZP_06618635.1| ParB-like protein [Bacteroides ovatus SD CMC 3f]
gi|294645932|ref|ZP_06723603.1| ParB-like protein [Bacteroides ovatus SD CC 2a]
gi|294805886|ref|ZP_06764756.1| ParB-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|298480315|ref|ZP_06998513.1| spoOJ protein [Bacteroides sp. D22]
gi|299148326|ref|ZP_07041388.1| spoOJ protein [Bacteroides sp. 3_1_23]
gi|156107218|gb|EDO08963.1| hypothetical protein BACOVA_04820 [Bacteroides ovatus ATCC 8483]
gi|229445637|gb|EEO51428.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|229451635|gb|EEO57426.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|262353857|gb|EEZ02950.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292632692|gb|EFF51285.1| ParB-like protein [Bacteroides ovatus SD CMC 3f]
gi|292638732|gb|EFF57079.1| ParB-like protein [Bacteroides ovatus SD CC 2a]
gi|294446915|gb|EFG15512.1| ParB-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|295086612|emb|CBK68135.1| chromosome segregation DNA-binding protein [Bacteroides
xylanisolvens XB1A]
gi|298273596|gb|EFI15159.1| spoOJ protein [Bacteroides sp. D22]
gi|298513087|gb|EFI36974.1| spoOJ protein [Bacteroides sp. 3_1_23]
Length = 296
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 91/299 (30%), Positives = 156/299 (52%), Gaps = 16/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ S + S + I + I NP+ PR F+
Sbjct: 1 MAT-QKRNALGRGLDALL--------SMDDVKTEGSSSINEIELAKITVNPNQPRREFDE 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R + + Y+IIAGERR+RA++ A L +P IR D+++
Sbjct: 52 TALQELADSIAEIGIIQPITLRKLSDDEYQIIAGERRYRASQRAGLKTIPAYIRTADDEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ L+ +Y TQ + +GK R+ +AN LR+LKLP+
Sbjct: 112 MMEMALIENIQREDLNAVEIALAYQHLLDQYELTQERLSERIGKKRTTIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
++ ++ +++ +GHAR L+S Q V + + + E + K
Sbjct: 172 PIQMALQNKQLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKS 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+KI + + L++++S + + KG+ I + E+L+ I +
Sbjct: 232 GTRKITPKRGKLPEEFNLLKQQLSGFFNTKVQLTCSEKGKGKISIPFGNEEELERIMEI 290
>gi|227487670|ref|ZP_03917986.1| stage 0 DNA-binding protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541380|ref|ZP_03971429.1| stage 0 DNA-binding protein [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092364|gb|EEI27676.1| stage 0 DNA-binding protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182931|gb|EEI63903.1| stage 0 DNA-binding protein [Corynebacterium glucuronolyticum ATCC
51866]
Length = 337
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 101/319 (31%), Positives = 158/319 (49%), Gaps = 34/319 (10%)
Query: 9 RLGRGLAALIGEVNQS------------------------------IDSPEKKTETIPES 38
LGRGLAALI E Q ++ E + S
Sbjct: 16 GLGRGLAALIPERQQEKPHLGDSAADILLGGGTPPRGFADGMAKAKAAQERRQAEELGAS 75
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID-NGLYKIIAGERR 97
I + IVPN PR F+ + L +L SIK G++QP++VR + Y+II GERR
Sbjct: 76 YREIDVDDIVPNAQQPREDFDPDALAELAHSIKEFGLLQPIVVRPREGAKHYEIIMGERR 135
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
+RA + A L +P I+R D+ S L A++EN+ R +LNPLEEA Y+QL+ E+ TQ +
Sbjct: 136 WRATRKAGLGTIPAIVRETDDSSMLRDALLENIHRVELNPLEEAAAYQQLLEEFDVTQAE 195
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVS 214
+G +G+SR + N +R+L+LP V+ + IS GHAR + +LA +V+
Sbjct: 196 LGEKIGRSRPVITNTIRLLQLPVGVQRKVAARVISSGHARAILGLKDKGQAEALATRVVA 255
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKG 274
+ +SVR TEE V ++ E+ K+ + Y ++S + +++ KG
Sbjct: 256 EGLSVRATEEAVTLLNSGGEEPKRKKREAVPLPAYAEQAAHRLSDGLDTRVTVNVGKKKG 315
Query: 275 QFCIKYETNEQLKIICSLL 293
+ +++ E + I LL
Sbjct: 316 KIVVEFSGKEDFERIIGLL 334
>gi|302559674|ref|ZP_07312016.1| ParB family protein [Streptomyces griseoflavus Tu4000]
gi|302477292|gb|EFL40385.1| ParB family protein [Streptomyces griseoflavus Tu4000]
Length = 365
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 7/291 (2%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPES--QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
L+A+ E ++ P I + +I PNP PR F+ + L +L SIK
Sbjct: 57 LSAVSRETEEAPAQSAAAVPAPPMGAHFAEIPLDAITPNPRQPREVFDEDALSELITSIK 116
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G++QP++VR + Y++I GERR+RA A L +P I+R D++ L A++EN+
Sbjct: 117 EVGLLQPVVVRQVGPERYELIMGERRWRACHEAGLEAIPAIVRATDDEKLLLDALLENLH 176
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R LNPLEEA Y+QL+ ++ T + + +G+SR V+N LR+LKL +V+ + +
Sbjct: 177 RAQLNPLEEAAAYDQLLKDFNCTHDQLADRIGRSRPQVSNTLRLLKLSPTVQRRVAAGVL 236
Query: 192 SLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE--KRKKIFEGSREK 246
S GHAR L+ + + LA IV++ +SVR EE+V ++ + +R K
Sbjct: 237 SAGHARALLSVEDSEEQDRLAHRIVAEGLSVRAVEEIVTLMGSRPQKAQRSKGPRAGALV 296
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
LTDL ++S + + + KG+ +++ + E L+ I L +
Sbjct: 297 SPALTDLATRLSDRFETRVKVDLGQKKGKITVEFASMEDLERILGTLAPGE 347
>gi|119896438|ref|YP_931651.1| chromosome partitioning protein ParB [Azoarcus sp. BH72]
gi|119668851|emb|CAL92764.1| probable chromosome partitioning protein ParB [Azoarcus sp. BH72]
Length = 287
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 97/300 (32%), Positives = 172/300 (57%), Gaps = 21/300 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL AL+ + + E ++ ++ P + PR +
Sbjct: 1 MTPPKLK-GLGRGLDALL--------AANRDDEAEKGELQTLATAALQPGKYQPRTRMDP 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
LE+L SIK+ G++QP++VR Y+IIAGERR+RA+++A L+E+P ++R +
Sbjct: 52 GSLEELAASIKAQGVMQPVLVRPLPQLNGAPRYEIIAGERRWRASQIAGLAELPCLVREI 111
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++++L ++++EN+QR+DLNPLEEA G ++LI E+ T VG+SR +N+LR+L
Sbjct: 112 PDEAALAMSLIENIQREDLNPLEEAGGIQRLIDEFAMTHQQAADAVGRSRPAASNLLRLL 171
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+E++ +I +GHAR L+ + LA ++ ++++SVR+TE LVQ N
Sbjct: 172 NLARPVQELLMAGDIDMGHARALLPLDGASQIQLANLVAARQLSVRETERLVQHTLN--- 228
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ + + ++ L LE++I+ +G + IK ++ G+ I++ + +QL + L
Sbjct: 229 --PRQKKAAAAPDRDLVRLEEEIADAIGATVKIKANKKGAGEVTIRFGSLDQLDGLLGRL 286
>gi|118471491|ref|YP_891131.1| ParB-like partition proteins [Mycobacterium smegmatis str. MC2 155]
gi|118172778|gb|ABK73674.1| ParB-like partition proteins [Mycobacterium smegmatis str. MC2 155]
Length = 351
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 91/351 (25%), Positives = 165/351 (47%), Gaps = 53/351 (15%)
Query: 1 MSNNYSKR-RLGRGLAALIGE-----------------------------------VNQS 24
M+ KR LGRGLAALI +
Sbjct: 1 MNQPARKRSGLGRGLAALIPTGPVDGAPDGLSPKIGATAADVLMGGAPSAPTPPAGTDAP 60
Query: 25 IDSPEKKT-----------ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
PE + + + I+ +I PNP PR F+ E L +L SI+
Sbjct: 61 AAPPEDGAAGDSAVQPLDRDEVGATYREIAPTAIEPNPRQPRQVFDDEALSELVHSIREF 120
Query: 74 GIIQPLIVRAIDNG---LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
G++QP++VR ++ Y+I+ GERR+RAA+ A L+ +P I+R + L A++EN+
Sbjct: 121 GLMQPIVVREVEPKGDIRYQIVMGERRWRAAQQAGLTAIPAIVRETADDGMLRDALLENI 180
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
R LNPLEEA Y+QL+ E+G T +++ + +G+SR ++N++R+L+LP +V+ +
Sbjct: 181 HRVQLNPLEEASAYQQLLDEFGVTHDELAARIGRSRPLISNMIRLLRLPIAVQRRVAAGV 240
Query: 191 ISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE--- 247
+S GHAR L++ + + ++ ++ + +E + K R K
Sbjct: 241 LSAGHARALLALEGGPEAQEELAARIVAEGLSVRATEEAVTLANREGKTTPAPRRKPIQM 300
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
L D+ +++S+ +++ KG+ +++ + + L+ I L+ +
Sbjct: 301 PGLQDVAERLSTAFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVELMSAQNE 351
>gi|75761485|ref|ZP_00741449.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491024|gb|EAO54276.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 285
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 102/292 (34%), Positives = 166/292 (56%), Gaps = 17/292 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I + + PNP+ PR +F E +++L
Sbjct: 5 KGLGRGINVFFPDLDVKEE----------ETIQEILVTELRPNPYQPRKHFNKEAIQELA 54
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERRFRAAK A L +VP ++R + + +E A++
Sbjct: 55 ISIKEHGILQPLIARK-SIKGYEIVAGERRFRAAKEAGLEKVPAVVRPLTEQQMMEFALL 113
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 114 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 173
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + K + +
Sbjct: 174 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQHVSRETK--KVKK 231
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGE 295
E+ + + E + K G ++ IK + KG+ I++ E L I LL +
Sbjct: 232 ERNIFFVERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLSQ 283
>gi|326442153|ref|ZP_08216887.1| ParB-like protein [Streptomyces clavuligerus ATCC 27064]
Length = 318
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 85/282 (30%), Positives = 147/282 (52%), Gaps = 5/282 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + + + +I PNP PR F+ + L +L SIK G++QP++
Sbjct: 19 PAPAPEPVAVDRSPSEAHFAELPLDAITPNPRQPREVFDEDALAELVTSIKEVGLLQPVV 78
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR + Y++I GERR+RA + A L +P I+R+ +++ L A++EN+ R LNPLEE
Sbjct: 79 VRQLGPERYELIMGERRWRACRDAGLEHIPAIVRHTEDEKLLLDALLENLHRAQLNPLEE 138
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+QL+ ++ T + + +G+SR V+N LR+L+L SV+ + +S GHAR L+
Sbjct: 139 AAAYDQLLRDFNCTHDQLADRIGRSRPQVSNTLRLLRLSPSVQRRVAAGVLSAGHARALL 198
Query: 201 ---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF--EGSREKEKYLTDLEK 255
+ D LA IV++ +SVR EE+V ++ + K L+DL
Sbjct: 199 SVEDSEDQDRLAHRIVAEGLSVRAVEEIVTLLNSHPQSVTKPKGPRAGTRLSPALSDLAA 258
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + + L I S L +
Sbjct: 259 RLSDRFETRVKVDLGQKKGKIVVEFASMDDLDRILSTLAPGE 300
>gi|254391436|ref|ZP_05006638.1| ParB [Streptomyces clavuligerus ATCC 27064]
gi|197705125|gb|EDY50937.1| ParB [Streptomyces clavuligerus ATCC 27064]
Length = 349
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 85/282 (30%), Positives = 147/282 (52%), Gaps = 5/282 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + + + +I PNP PR F+ + L +L SIK G++QP++
Sbjct: 50 PAPAPEPVAVDRSPSEAHFAELPLDAITPNPRQPREVFDEDALAELVTSIKEVGLLQPVV 109
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR + Y++I GERR+RA + A L +P I+R+ +++ L A++EN+ R LNPLEE
Sbjct: 110 VRQLGPERYELIMGERRWRACRDAGLEHIPAIVRHTEDEKLLLDALLENLHRAQLNPLEE 169
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+QL+ ++ T + + +G+SR V+N LR+L+L SV+ + +S GHAR L+
Sbjct: 170 AAAYDQLLRDFNCTHDQLADRIGRSRPQVSNTLRLLRLSPSVQRRVAAGVLSAGHARALL 229
Query: 201 ---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF--EGSREKEKYLTDLEK 255
+ D LA IV++ +SVR EE+V ++ + K L+DL
Sbjct: 230 SVEDSEDQDRLAHRIVAEGLSVRAVEEIVTLLNSHPQSVTKPKGPRAGTRLSPALSDLAA 289
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + + L I S L +
Sbjct: 290 RLSDRFETRVKVDLGQKKGKIVVEFASMDDLDRILSTLAPGE 331
>gi|294813732|ref|ZP_06772375.1| Putative ParB protein [Streptomyces clavuligerus ATCC 27064]
gi|294326331|gb|EFG07974.1| Putative ParB protein [Streptomyces clavuligerus ATCC 27064]
Length = 363
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 85/282 (30%), Positives = 147/282 (52%), Gaps = 5/282 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + + + +I PNP PR F+ + L +L SIK G++QP++
Sbjct: 64 PAPAPEPVAVDRSPSEAHFAELPLDAITPNPRQPREVFDEDALAELVTSIKEVGLLQPVV 123
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR + Y++I GERR+RA + A L +P I+R+ +++ L A++EN+ R LNPLEE
Sbjct: 124 VRQLGPERYELIMGERRWRACRDAGLEHIPAIVRHTEDEKLLLDALLENLHRAQLNPLEE 183
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+QL+ ++ T + + +G+SR V+N LR+L+L SV+ + +S GHAR L+
Sbjct: 184 AAAYDQLLRDFNCTHDQLADRIGRSRPQVSNTLRLLRLSPSVQRRVAAGVLSAGHARALL 243
Query: 201 ---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF--EGSREKEKYLTDLEK 255
+ D LA IV++ +SVR EE+V ++ + K L+DL
Sbjct: 244 SVEDSEDQDRLAHRIVAEGLSVRAVEEIVTLLNSHPQSVTKPKGPRAGTRLSPALSDLAA 303
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + + L I S L +
Sbjct: 304 RLSDRFETRVKVDLGQKKGKIVVEFASMDDLDRILSTLAPGE 345
>gi|221633038|ref|YP_002522263.1| stage 0 sporulation protein J [Thermomicrobium roseum DSM 5159]
gi|221156786|gb|ACM05913.1| stage 0 sporulation protein J [Thermomicrobium roseum DSM 5159]
Length = 293
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 94/294 (31%), Positives = 159/294 (54%), Gaps = 15/294 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI +T P++ I++ I PNP PR F
Sbjct: 1 MA---RRSGLGRGLDALIP-----------RTTVDPDAIREIALDDIAPNPRQPRQSFPE 46
Query: 61 EGLEDLCQSIKSHGIIQP-LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L++L +SI++HGIIQP ++ + Y+++AGERR+RAA++A L+ VP ++R++ K
Sbjct: 47 ESLQELAESIRTHGIIQPLVVTYSGGKPPYQLVAGERRWRAARLAGLTTVPALVRDLSPK 106
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++EIA++EN+QR DL+ LE A Y LI E+G TQ ++ + VGKSRS +AN LR+L+ P
Sbjct: 107 DAVEIALIENLQRADLSALETAAAYRTLIEEFGLTQAEVAARVGKSRSAIANTLRLLEAP 166
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+++ + +I+ GHAR L+S D S + + + + ++K
Sbjct: 167 ETIQRALAMGDITEGHARALLSLPDTASQLAALQEIRQRSLTVRQTEELVRRWIREKKPP 226
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
S + + + S++ + ++ + G+ I Y + E+L + L
Sbjct: 227 RRTSSPLSPEIEHVLDALRSRLRTKVELRTSSRGGRLIIHYYSAEELARLIDEL 280
>gi|225377569|ref|ZP_03754790.1| hypothetical protein ROSEINA2194_03219 [Roseburia inulinivorans DSM
16841]
gi|225210545|gb|EEG92899.1| hypothetical protein ROSEINA2194_03219 [Roseburia inulinivorans DSM
16841]
Length = 308
Score = 142 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 182/304 (59%), Gaps = 14/304 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGE------VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNP 54
M+ K LG+GL +LI + P K + ++I+ + PN P
Sbjct: 1 MATA-KKNGLGKGLDSLITNKVNTAKTTTATTKPAVKKDEKVVEGILVNINKVEPNREQP 59
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R F+ + L +L +SIK G++QPL+V+ D Y+IIAGERR+RAAK+A+L EVPVII+
Sbjct: 60 RKNFDEDALLELAESIKQFGVLQPLLVQQKD-DYYEIIAGERRWRAAKLANLKEVPVIIK 118
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+ + +EI+++EN+QR++LNP+EEA+ Y++L++E+ Q+++ V KSR+ V N +R
Sbjct: 119 KLTEQEVVEISLIENIQRENLNPIEEAIAYKRLLTEFNLKQDEVAERVSKSRTAVTNSMR 178
Query: 175 ILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQD- 230
+LKL V++M+ + IS GHAR L+ ++AQ I +K+SVR+TE+LV++
Sbjct: 179 LLKLNEKVQQMVIDDMISTGHARALLGLNDLEKQYTVAQQIFDEKLSVRETEKLVKKIQQ 238
Query: 231 -NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKI 288
++ +K + + E DLE+K+ +G ++I + N KG+ I+Y + ++L
Sbjct: 239 EKNQKDTEKNKKIDPKLEAICNDLEEKMKGILGTKVAINQKDNKKGKIEIEYYSMDELDR 298
Query: 289 ICSL 292
I L
Sbjct: 299 IMDL 302
>gi|225867460|ref|YP_002752838.1| stage 0 sporulation protein J [Bacillus cereus 03BB102]
gi|225790788|gb|ACO31005.1| stage 0 sporulation protein J [Bacillus cereus 03BB102]
Length = 283
Score = 142 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 170/294 (57%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I+I + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETIQEIAITELRPNPYQPRKHFNKEAIQELS 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 53 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQRVSRETKQVK--K 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I++ E L I LL + +
Sbjct: 230 ERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN 283
>gi|58338074|ref|YP_194659.1| chromosome partitioning protein [Lactobacillus acidophilus NCFM]
gi|227902748|ref|ZP_04020553.1| stage 0 sporulation protein J [Lactobacillus acidophilus ATCC 4796]
gi|58255391|gb|AAV43628.1| chromosome partitioning protein [Lactobacillus acidophilus NCFM]
gi|227869411|gb|EEJ76832.1| stage 0 sporulation protein J [Lactobacillus acidophilus ATCC 4796]
Length = 294
Score = 142 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 110/298 (36%), Positives = 169/298 (56%), Gaps = 20/298 (6%)
Query: 2 SNNYSKRR-LGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
S + K+ LGRG+ AL + Q ++ E + + I PNP+ PR +F+
Sbjct: 7 SKDTRKKGGLGRGIEALFEDEPQVEETEEVQELEL---------SDIRPNPYQPRKHFDD 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L++L SIK +G+ QP+IVR Y+IIAGERR+RA+K+A + +P IIR D
Sbjct: 58 KSLKELSDSIKENGVFQPIIVRK-SVNGYEIIAGERRYRASKLAKKTTIPAIIRKFDESQ 116
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DL PLEEA YE L G TQ ++ +GKSR ++AN LR+L LPS
Sbjct: 117 MMEVAVLENLQREDLTPLEEAQAYEMLQKNLGLTQEEVSKRMGKSRPYIANYLRLLTLPS 176
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ +++ E+S+G ART L LA+ +V + M VR E LV E + K
Sbjct: 177 KTKRLLQHGELSMGQARTLLGLKDKDKIDVLAKKVVQEGMPVRKVEALVGEMNA-----K 231
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
K + +K ++ E ++S K G ++SI ++ KG I + + ++L I LLG
Sbjct: 232 KPQKKVVKKSAFIRASETQLSDKFGASVSISENKKGKGHLSIDFASADELNRILDLLG 289
>gi|320102622|ref|YP_004178213.1| parB-like partition protein [Isosphaera pallida ATCC 43644]
gi|319749904|gb|ADV61664.1| parB-like partition protein [Isosphaera pallida ATCC 43644]
Length = 303
Score = 142 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 161/304 (52%), Gaps = 19/304 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++RRLG+GL AL+G D + I + I PNP+ PR F E L
Sbjct: 1 MNRRRLGKGLDALLG----HADGGAEPGSIDRSELIRIGLERIGPNPYQPRRDFPEEELR 56
Query: 65 DLCQSIKSHGIIQPLIVR--AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L SI+ HG++QP++VR D Y++IAGERR RA +A + EVP I +D++
Sbjct: 57 ALADSIREHGVLQPILVRPDPDDPERYQLIAGERRLRACVLAQVFEVPARIMALDDRKVA 116
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A+VEN+QR+DL PLE+A+ + ++ +G TQ ++ +G RS VAN++R+L LP SV
Sbjct: 117 ELALVENLQREDLGPLEKAVAFRDYLAAHGCTQEELAKRLGLDRSTVANLIRLLDLPDSV 176
Query: 183 REMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
E +R+ +++ GHAR L+ ++ A +V + +SVR TE LV D +
Sbjct: 177 AEWLRQRKLTQGHARALLALGDAEAIIAAAARVVEEGLSVRQTETLVSGGDPYAARATSG 236
Query: 240 F---------EGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKII 289
R + DLE + K G +++K KG+ I++ E+ +
Sbjct: 237 SSSASRRSNDPAERVVPSHFRDLETHLRQKFGTAVAVKPTGQGKGRIVIEFANEEEFARV 296
Query: 290 CSLL 293
+L+
Sbjct: 297 SALI 300
>gi|149190482|ref|ZP_01868753.1| ParB family protein [Vibrio shilonii AK1]
gi|148835736|gb|EDL52702.1| ParB family protein [Vibrio shilonii AK1]
Length = 293
Score = 142 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 179/298 (60%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTET----IPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + T++ +SI+S+ P + PR
Sbjct: 1 MSKRGLGKGLDALLSTSSIAREKQQVATQSQSLSTDGDLAELSINSLRPGIYQPRKDMAP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR++ + ++IIAGERR+RAA+ A L VP +++NV +++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRSVGHEQFEIIAGERRWRAARQAGLKMVPCLVKNVQDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ +L
Sbjct: 121 AVAMALIENIQREDLNAIEEAQALERLQDEFELTHQQVADVIGKSRTAVSNLLRLNQLEP 180
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
SV++++ ++I +GHAR L++ + A + K+++VR TE+LV++ +
Sbjct: 181 SVKKLVEAKQIDMGHARALLALEGEVQCEVADTVAKKQLTVRQTEDLVKK-----CLKPN 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLLGE 295
E + +++ ++ ++S +G +S +++ + K + I + +L+ + + L
Sbjct: 236 SSEKKQSEDRDAKEISHRLSEILGAKVSLVRNASGKAKVTISLDEPHKLEQLIAKLES 293
>gi|227514199|ref|ZP_03944248.1| stage 0 DNA-binding protein [Lactobacillus fermentum ATCC 14931]
gi|227087431|gb|EEI22743.1| stage 0 DNA-binding protein [Lactobacillus fermentum ATCC 14931]
Length = 277
Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 95/270 (35%), Positives = 158/270 (58%), Gaps = 9/270 (3%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG-- 87
E +++ SI PNP+ PR F+ EGL +L +SI++ G+ QP+IVR D
Sbjct: 8 TAPPGPGEVVRELAVDSIRPNPYQPRRTFDQEGLAELARSIEAAGVFQPIIVRRPDPNLN 67
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y++IAGERR RA +M +P I+R +D+++ +E+A++EN+QR+DL+PLEEA Y+ L
Sbjct: 68 RYELIAGERRLRATRMTERKTIPAIVRVLDDQTMMEVAVLENLQREDLSPLEEAQAYQTL 127
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSD 204
I TQ + + +GKSR ++AN LR+L LP V++M+ E+S+G ART +
Sbjct: 128 IERLNLTQAQVAARLGKSRPYIANYLRLLGLPEEVKQMLASGELSMGQARTLLGVKDERR 187
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
+ LA+ + ++ ++VR EE+V + + + + YL + E +++ K+G
Sbjct: 188 LVELAKRVANEGLTVRQLEEIVAGINK----KGRQKPVVKSANPYLREAESQLAGKLGTK 243
Query: 265 ISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+S + + G+ I Y +N+ L I LLG
Sbjct: 244 VSFQAKRRGGKIVIPYGSNQDLNRILELLG 273
>gi|153807415|ref|ZP_01960083.1| hypothetical protein BACCAC_01694 [Bacteroides caccae ATCC 43185]
gi|149129777|gb|EDM20989.1| hypothetical protein BACCAC_01694 [Bacteroides caccae ATCC 43185]
Length = 296
Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 91/299 (30%), Positives = 157/299 (52%), Gaps = 16/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ S + S + I + I NP+ PR F+
Sbjct: 1 MAT-QRRNALGRGLDALL--------SMDDVKTEGSSSINEIELAKISVNPNQPRREFDE 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R + + Y+IIAGERR+RA++ A L +P IR D+++
Sbjct: 52 TALQELADSIAEIGIIQPITLRKVSDNEYQIIAGERRYRASQRAGLKTIPAYIRTADDEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ L+ +Y TQ + +GK+R+ +AN LR+LKLP+
Sbjct: 112 MMEMALIENIQREDLNAVEIALAYQHLLDQYELTQERLSERIGKNRTTIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
++ ++ +++ +GHAR L+S Q V + + + E + K
Sbjct: 172 PIQMALQNKQLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKS 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+KI + + L++++S + + KG+ I + E+L+ I +
Sbjct: 232 GTRKITPKRAKLPEEFNLLKQQLSGFFSTKVQLTCSEKGKGKISIPFSNEEELERIMEI 290
>gi|291457900|ref|ZP_06597290.1| spoOJ protein [Oribacterium sp. oral taxon 078 str. F0262]
gi|291419444|gb|EFE93163.1| spoOJ protein [Oribacterium sp. oral taxon 078 str. F0262]
Length = 309
Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 116/309 (37%), Positives = 189/309 (61%), Gaps = 20/309 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDS-------------PEKKTETIPESQDCISIHSIVPNP 51
++ RLG+GL A+ G + + E + E + + I I PN
Sbjct: 1 MARERLGKGLDAIFGPSSSRASAHAEGVTKNAGRAEREDGEKKAGEKEQLVRIGLIQPNR 60
Query: 52 HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPV 111
+ PR F+ E L++L +SI+ +G+IQPLIV+ Y+I+AGERR+RAAK+A LSE+PV
Sbjct: 61 NQPRKDFDEEKLQELAESIRLYGVIQPLIVKKQGPL-YEIVAGERRWRAAKLAGLSELPV 119
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
I+R+ D K++ EI+I+EN+QR DLNP+EEA+ Y+ L++EYG TQ ++ S V K+RS + N
Sbjct: 120 IVRDFDEKTAKEISIIENIQRSDLNPVEEAMAYQSLLTEYGLTQEELASRVSKNRSTITN 179
Query: 172 ILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
LR+LKL + ++R+ +S GHAR + ++ +++ +++SVR+ E L +E
Sbjct: 180 SLRLLKLEPEILSLLREGRMSQGHARALLGIGDSALRRKISERCAREELSVREIEGLARE 239
Query: 229 QDNKKEKRKKIFEGSREKEKYL--TDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQ 285
+K+++K EG ++ L +LEK++ S++G +SI R+ K G+ I+Y + E
Sbjct: 240 GRGRKKEKKGSEEGREREQLLLACRELEKRMKSRLGTKVSIVSRDGKRGRLEIEYYSPED 299
Query: 286 LKIICSLLG 294
L+ I SLL
Sbjct: 300 LERISSLLN 308
>gi|254476834|ref|ZP_05090220.1| chromosome partitioning protein ParB [Ruegeria sp. R11]
gi|214031077|gb|EEB71912.1| chromosome partitioning protein ParB [Ruegeria sp. R11]
Length = 279
Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 110/280 (39%), Positives = 170/280 (60%), Gaps = 5/280 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +VN S EK+ E + I ++ NP PR F E L+DL SI+ G++Q
Sbjct: 1 MADVNPEPVSTEKQANRSTE--VLVPIEKVIANPDQPRRQFLQEDLDDLTASIREKGVLQ 58
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PLIVR G Y+I+AGERR+RAA+ A L EVPVIIR+ + +E+AI+EN+QR DLN
Sbjct: 59 PLIVRPRPGGQYEIVAGERRWRAAQGAQLHEVPVIIRDYSDVEMMEVAIIENIQRSDLNA 118
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EEA Y+QL+ ++G+TQ + +GKSRSH+AN++R+L LP V+ ++++ ++S GHAR
Sbjct: 119 MEEAQSYKQLMDKFGHTQEKMAEALGKSRSHIANLVRLLHLPDDVQTLVQERKLSAGHAR 178
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQE-QDNKKEKRKKIFEGSREKEKYLTDLEKK 256
L+++ + LA+ IV +SVR TE LV++ + + + + EK+ LE
Sbjct: 179 ALITSDNASDLAKKIVKGGLSVRATEALVKKDAAGLQTAQARSAKKPAEKDADTRALEGD 238
Query: 257 ISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
+S+ + + +SI HR G I Y T ++L +C L
Sbjct: 239 LSAALRMKVSIDHRAGGESGTVTISYSTLDELDDLCGRLS 278
>gi|189183331|ref|YP_001937116.1| Spo0J protein [Orientia tsutsugamushi str. Ikeda]
gi|189180102|dbj|BAG39882.1| Spo0J protein [Orientia tsutsugamushi str. Ikeda]
Length = 293
Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 111/293 (37%), Positives = 181/293 (61%), Gaps = 8/293 (2%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
R LGRGL+AL+ + S + + + S ++I+ + NPH PR F+ + L +
Sbjct: 5 KTRGLGRGLSALLNDNISSSSTTISQND----SVSILNINQLTVNPHQPRKSFDHDSLVE 60
Query: 66 LCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L +SI HGIIQP+IV D Y IIAGERR+RAAK+A+L EVPV+I+++DN L++
Sbjct: 61 LSESILVHGIIQPIIVNKTEDQSKYIIIAGERRWRAAKIANLIEVPVVIKDIDNDQVLQV 120
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+ LN +EEA GY +LI E+ +TQ+ + I+GKSRSH+AN+LR+ LP V++
Sbjct: 121 ALIENIQRQKLNIIEEAEGYLKLIEEFNFTQDSLSKILGKSRSHIANVLRLNSLPIPVKD 180
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ + +I++GHARTL+ D + +A+ I+ + ++VR TE+ +++ N + K
Sbjct: 181 SLIQGKITMGHARTLIGHEDAIKIAETIIKQNLNVRQTEKYIKKLTNPNKLNKSNHVIKY 240
Query: 245 EKEKYLTDLE---KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
L +L + +S K+ + I++ N+ G+ I + E+L I S +
Sbjct: 241 STGSELDELSILTQNLSQKLNTKVFIENSNHGGKITIFFSNLEKLDDILSRIK 293
>gi|113869581|ref|YP_728070.1| chromosome partitioning protein ParB [Ralstonia eutropha H16]
gi|113528357|emb|CAJ94702.1| chromosome partitioning protein ParB [Ralstonia eutropha H16]
Length = 300
Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 107/300 (35%), Positives = 187/300 (62%), Gaps = 11/300 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL AL+G + ++S +++ + + ++ + P + PR +
Sbjct: 1 MSTA-KKKGLGRGLEALLGGPAEIVESVKQE-----GAPTVLRLNQLQPGKYQPRTRMDE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L SI++ G++QP++VR + + Y+IIAGERRFRA+K+A L +VPV++++V ++
Sbjct: 55 GALQELAASIRAQGLMQPILVRRVAEPDRYEIIAGERRFRASKLAGLDKVPVLVKDVADE 114
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++ +A++EN+QR+DLNPLEEA G +LI E+ +T VG+SRS V+N+LR+L L
Sbjct: 115 AAAAMALIENIQREDLNPLEEAQGIMRLIREFSFTHEQAAESVGRSRSAVSNLLRLLNLA 174
Query: 180 SSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ V+ M+ ++ +GHAR L V ++ ++LA IV+K++SVR+TE+LV + +
Sbjct: 175 APVQTMLMAGDLDMGHARALLAVDGANQITLANQIVNKRLSVRETEKLVASTLKPFDLKS 234
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGEN 296
+G+ + + LE+++S +GL + IK KGQ I + N+ L+ + L E+
Sbjct: 235 LKQKGANNV-RDVARLEEELSDALGLAVQIKLGARGKGQLTIHFSDNDALEGVLVRLRES 293
>gi|254384782|ref|ZP_05000119.1| ParB [Streptomyces sp. Mg1]
gi|194343664|gb|EDX24630.1| ParB [Streptomyces sp. Mg1]
Length = 364
Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 147/284 (51%), Gaps = 5/284 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G + E + + + SI PNP PR F+ + L +L SI+ G++QP
Sbjct: 70 GGATSPSEPEPATNEVAGATFAELPMDSITPNPRQPREVFDEDALAELVTSIQEVGLLQP 129
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR G Y++I GERR+RA + A L +P IIR D++ L A++EN+ R LNPL
Sbjct: 130 VVVRQAAPGRYELIMGERRWRACREAGLERIPAIIRATDDEKLLLDALLENLHRAQLNPL 189
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR- 197
EEA Y+QL+ ++ T + + +G+SR V+N LR+LKL +SV+ + +S GHAR
Sbjct: 190 EEAAAYDQLLRDFNCTHDQLADRIGRSRPQVSNTLRLLKLSASVQRRVAAGVLSAGHARA 249
Query: 198 --TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF--EGSREKEKYLTDL 253
++ + LA IV++ +SVR EE+V ++ E K L+ L
Sbjct: 250 LLSVSDSETQDKLAHRIVAEGLSVRAVEEIVALMSSEPESVVKPKGPRAGTRVAPALSQL 309
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L+ I L +
Sbjct: 310 ATRLSDRFETRVKVDLGQKKGKITVEFASMEDLERILGTLAPGE 353
>gi|299782736|gb|ADJ40734.1| Stage 0 DNA-binding protein [Lactobacillus fermentum CECT 5716]
Length = 277
Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 93/267 (34%), Positives = 152/267 (56%), Gaps = 3/267 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG-- 87
E +++ SI PNP+ PR F+ EGL +L +SI++ G+ QP+IVR D
Sbjct: 8 TAPPGPGEVVRELAVDSIRPNPYQPRRTFDQEGLAELARSIEAAGVFQPIIVRRPDPNLN 67
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y++IAGERR RA +M +P I+R +D+++ +E+A++EN+QR+DL+PLEEA Y+ L
Sbjct: 68 RYELIAGERRLRATRMTERKTIPAIVRVLDDQTMMEVAVLENLQREDLSPLEEAQAYQTL 127
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I TQ + + +GKSR ++AN LR+L LP V++M+ E+S+G ARTL+ D
Sbjct: 128 IERLNLTQAQVAARLGKSRPYIANYLRLLGLPEEVKQMLASGELSMGQARTLLGVKD-ER 186
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
+ + + T ++E K+ + + YL + E +++ K+G +S
Sbjct: 187 RLVELAKRVANEGLTVRQIEEIVAAINKKGRQKPVVKSANPYLREAESQLAGKLGTKVSF 246
Query: 268 KHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + G+ I Y +N+ L I LLG
Sbjct: 247 QAKRRGGKIVIPYGSNQDLNRILELLG 273
>gi|218235220|ref|YP_002370254.1| stage 0 sporulation protein J [Bacillus cereus B4264]
gi|218163177|gb|ACK63169.1| stage 0 sporulation protein J [Bacillus cereus B4264]
gi|326943277|gb|AEA19173.1| stage 0 sporulation protein J [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 283
Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 167/294 (56%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I + + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETIQEILVTELRPNPYQPRKHFNKEAIQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERRFRAAK A L +VP ++R + + +E A++
Sbjct: 53 ISIKEHGILQPLIARK-SIKGYEIVAGERRFRAAKEAGLEKVPAVVRQLTEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQHVSRETK--KVKK 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I++ E L I LL + +
Sbjct: 230 ERNIFFVERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN 283
>gi|209696451|ref|YP_002264382.1| putative chromosome partitioning protein ParB [Aliivibrio
salmonicida LFI1238]
gi|208010405|emb|CAQ80751.1| putative chromosome partitioning protein ParB [Aliivibrio
salmonicida LFI1238]
Length = 294
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 98/302 (32%), Positives = 168/302 (55%), Gaps = 15/302 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETI----PESQDCISIHSIVPNPHNPRN 56
MSN KR LG+GL AL+ + + + ++ + IH + P + PR
Sbjct: 1 MSN---KRGLGKGLDALLATSSLAREKQTAAVQSESLAKNAQLIELGIHQLTPGQYQPRK 57
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
E E L++L SI+S GIIQP++VR I Y+IIAGERRFRAAK A L +P +++
Sbjct: 58 IMEKEALDELALSIRSQGIIQPIVVREIAPLQYEIIAGERRFRAAKQAGLKHIPCVVKVA 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++K+++ +A++EN+QR+DLN +EEA E+L E+ T I ++GKSR+ V N+LR+
Sbjct: 118 EDKAAIAMALIENIQREDLNAIEEAQALERLQREFELTHQQISDVIGKSRTTVTNLLRLN 177
Query: 177 KLPSSVREMIRKE--EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ ++ + E+ A + + + LA ++V KK++VR TE+ V++
Sbjct: 178 ALSDEVKALVEAKSLEMGHARALLALESELQIELAHIVVKKKLTVRQTEQQVKKLLAPVV 237
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+ + EK+ + L K+S +G + I ++ + KG+ I ++ +L+ + + L
Sbjct: 238 EVEV-----SEKDAQIEALSTKLSETLGSKVVITQNTSGKGKLTISFDEAHKLEQLITKL 292
Query: 294 GE 295
Sbjct: 293 ES 294
>gi|328883710|emb|CCA56949.1| Chromosome (plasmid) partitioning protein ParB or Stage 0
sporulation protein J [Streptomyces venezuelae ATCC
10712]
Length = 326
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 5/280 (1%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
+ + + SI PNP PR F+ + L +L SIK G++QP++VR
Sbjct: 29 TEPEPAAVPESPAGAHFAELPLDSITPNPRQPREVFDEDALAELVTSIKEVGLLQPVVVR 88
Query: 83 AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
Y++I GERR+RA + A L +P I+R+ +++ L A++EN+ R LNPLEEA
Sbjct: 89 RAGTDRYELIMGERRWRACREAGLERIPAIVRDTEDEKLLLDALLENLHRAQLNPLEEAA 148
Query: 143 GYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV-- 200
Y+QL+ ++ T + + +G+SR V+N LR+L+L V+ + IS GHAR L+
Sbjct: 149 AYDQLLKDFHCTHDQLADRIGRSRPQVSNTLRLLRLSPPVQRRVAAGVISAGHARALLAV 208
Query: 201 -STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR--EKEKYLTDLEKKI 257
LA IV++ +SVR EE+V ++ K LTDL ++
Sbjct: 209 EEPEAQDKLAYRIVAEGLSVRAVEEIVTLMASEPASPVKPKGPRAGGRVSPALTDLASRL 268
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
S + + + KG+ +++ + E L I S L +
Sbjct: 269 SDRFETRVKVDLGQKKGKIVVEFASMEDLDRILSTLAPGE 308
>gi|313835188|gb|EFS72902.1| ParB-like partition protein [Propionibacterium acnes HL037PA2]
gi|314929160|gb|EFS92991.1| ParB-like partition protein [Propionibacterium acnes HL044PA1]
gi|314970890|gb|EFT14988.1| ParB-like partition protein [Propionibacterium acnes HL037PA3]
Length = 308
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 97/309 (31%), Positives = 163/309 (52%), Gaps = 15/309 (4%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M LGRG L + S D + IS+ I P
Sbjct: 1 MMMATKHSGLGRGFGELFQRTDLDDDDDQLIDDISADDDTAGKAVGGSTFRLISVDKIQP 60
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N H PR F+ L +L +SI+ G++QP++V ID+G Y+++ GERR+RAA A L+ +
Sbjct: 61 NTHQPRKTFDEHELAELSESIRVVGVLQPVVVTPIDDG-YELVMGERRWRAASKAGLTAI 119
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 120 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSERIQRSRSQI 179
Query: 170 ANILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + + EI+ GHAR + +S A+ +V + +SVR TEELV
Sbjct: 180 ANTIRLLKLSAGVQKRLLEGEITAGHARCLLAIGDPDLQVSTAKWVVDEGLSVRATEELV 239
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
++ + + K ++ L ++S + + I+ RN KG + +E+L
Sbjct: 240 RQTLDDTTEVKPHQRKKPGRDTEAVKLGDQLSEQFHTAVKIRRRNGKGTITFPFNGDEEL 299
Query: 287 KIICSLLGE 295
+ + +L
Sbjct: 300 ERLIDILSN 308
>gi|218900620|ref|YP_002449031.1| stage 0 sporulation protein J [Bacillus cereus G9842]
gi|218543918|gb|ACK96312.1| stage 0 sporulation protein J [Bacillus cereus G9842]
Length = 283
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 102/292 (34%), Positives = 166/292 (56%), Gaps = 17/292 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I + + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETIQEILVTELRPNPYQPRKHFNKEAIQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERRFRAAK A L +VP ++R + + +E A++
Sbjct: 53 ISIKEHGILQPLIARK-SIKGYEIVAGERRFRAAKEAGLEKVPAVVRQLTEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQHVSRETK--KVKK 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGE 295
E+ + + E + K G ++ IK + KG+ I++ E L I LL +
Sbjct: 230 ERNIFFVERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLSQ 281
>gi|83953080|ref|ZP_00961802.1| chromosome partitioning protein parB [Sulfitobacter sp. NAS-14.1]
gi|83842048|gb|EAP81216.1| chromosome partitioning protein parB [Sulfitobacter sp. NAS-14.1]
Length = 278
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 108/274 (39%), Positives = 175/274 (63%), Gaps = 4/274 (1%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + ++ + I I PNP PR F+ + L+DL SI+ G+IQPLIVR D+
Sbjct: 5 AETQTVASEGAAEQYVPIEKISPNPEQPRKRFDPQDLDDLANSIREKGVIQPLIVRRRDD 64
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G ++I+AGERR+RA++MA L E+P+I+R + LE+AI+EN+QR DLN +EEA GY Q
Sbjct: 65 GTFEIVAGERRWRASQMAQLHELPIIVREFTDVEVLEVAIIENIQRADLNSIEEAAGYRQ 124
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
L+ +G+TQ + +GKSRSH+AN+LR+L LP +V EM+R+ +++ GHARTLV + +P
Sbjct: 125 LMDRFGHTQEKMAEALGKSRSHIANLLRLLNLPENVLEMVRQGDLTAGHARTLVPSKNPE 184
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF--EGSREKEKYLTDLEKKISSKVGLN 264
LA+ I++ +SVR E L++++ + + + S EK+ LE +S+ +GL
Sbjct: 185 KLAKQIIAGGLSVRAAEALIKKEQQAENEGPNKRAGKSSNEKDADTRALEGDLSANLGLK 244
Query: 265 ISIKHRNNK--GQFCIKYETNEQLKIICSLLGEN 296
+++ H+ + GQ + Y T ++L +C L +
Sbjct: 245 VTLNHKPGQEAGQMVLHYTTMDELDELCQRLSAS 278
>gi|307330009|ref|ZP_07609161.1| parB-like partition protein [Streptomyces violaceusniger Tu 4113]
gi|306884385|gb|EFN15419.1| parB-like partition protein [Streptomyces violaceusniger Tu 4113]
Length = 380
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 87/283 (30%), Positives = 145/283 (51%), Gaps = 5/283 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E E + + I PNP PR F+ + L +L SI+ G++QP+
Sbjct: 79 EAEPEAAPAVMPEEVAGAHFAELPLDFITPNPRQPREVFDEDALAELVTSIQEVGLLQPV 138
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + Y++I GERR+RA + A L ++P I+R D++ L A++EN+ R LNPLE
Sbjct: 139 VVRQLAPERYELIMGERRWRACREAGLEKIPSIVRATDDEKLLLDALLENLHRAQLNPLE 198
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+QL+ ++ T +++ +G+SR V+N LR+L+L SV+ + +S GHAR L
Sbjct: 199 EAAAYDQLLKDFNCTHDELADRIGRSRPQVSNTLRLLRLSPSVQRRVAAGVLSAGHARAL 258
Query: 200 V---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS--REKEKYLTDLE 254
+ + LA IV++ +SVR EE+V ++ K LTDL
Sbjct: 259 LSVDDAEEQDRLAHRIVAEGLSVRAVEEIVTLMGSRSGGTTKTKSPRAGARVSPALTDLA 318
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L+ I L +
Sbjct: 319 SRLSDRFETRVKVDLGQKKGKIVVEFASIEDLERILGSLAPGE 361
>gi|85706897|ref|ZP_01037987.1| ParB-like partition protein [Roseovarius sp. 217]
gi|85668508|gb|EAQ23379.1| ParB-like partition protein [Roseovarius sp. 217]
Length = 283
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 109/281 (38%), Positives = 169/281 (60%), Gaps = 7/281 (2%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ S D +K +T + + + PNP+ PR F+ LEDL +SI GIIQPLI
Sbjct: 2 ADVSADVTARKDDTPRRPDLMVPVEKVRPNPNQPRRSFDPTLLEDLARSISEKGIIQPLI 61
Query: 81 VRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
VR + Y+I+AGERR+RAA+MA L ++PV++R+ D+ LE+AI+EN+QR DLNP+
Sbjct: 62 VRLVSGRADEYEIVAGERRWRAAQMAKLHQIPVLVRDFDDTEVLEVAIIENIQRADLNPV 121
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA GY+QL+ ++G+TQ + +GKSRSH+AN +R+L LP V +R ++S GHAR
Sbjct: 122 EEASGYQQLMQKFGHTQEKLAEALGKSRSHIANSIRLLALPEEVLSYVRDGKLSAGHARA 181
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE---KEKYLTDLEK 255
L++ DP +LA+ ++ K +SVR+TE+L + + R+ K+ LE+
Sbjct: 182 LITVDDPAALARQVIQKSLSVRETEKLAKSGPGNIFRESDQRPKPRKEPLKDADTKALEE 241
Query: 256 KISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLG 294
+S+ + + + I H GQ I Y + +QL + +L
Sbjct: 242 DLSANLTMKVQIDHIPGRENGQITIHYASLDQLDRLIGMLS 282
>gi|206970075|ref|ZP_03231028.1| stage 0 sporulation protein J [Bacillus cereus AH1134]
gi|206734652|gb|EDZ51821.1| stage 0 sporulation protein J [Bacillus cereus AH1134]
Length = 283
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 168/294 (57%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I + + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETIQEILVTELRPNPYQPRKHFNKEAIQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERRFRAAK A L +VP ++R ++ + +E A++
Sbjct: 53 ISIKEHGILQPLIARK-SIKGYEIVAGERRFRAAKEAGLEKVPAVVRQLNEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQHVSRETK--KVKK 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I++ E L I LL + +
Sbjct: 230 ERNIFFVERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN 283
>gi|331086943|ref|ZP_08336019.1| hypothetical protein HMPREF0987_02322 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409604|gb|EGG89043.1| hypothetical protein HMPREF0987_02322 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 306
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 178/305 (58%), Gaps = 18/305 (5%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPE----------KKTETIPESQDCISIHSIVPNPH 52
+ LG+GL +LI + ++ + +KT + + I + PN
Sbjct: 1 MAVKRGGLGKGLDSLIPDHKPKANTSKDKVSEQASGKEKTTMPASGEQKVKITKVEPNRT 60
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI 112
PR F+ + L +L SI+ G++QPL+V+ Y+IIAGERR+RAAKMA L E+PVI
Sbjct: 61 QPRKNFDEDSLIELADSIRQFGVLQPLLVQKKG-DYYEIIAGERRWRAAKMAGLKEIPVI 119
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
IR ++ +EIA++EN+QR++LNP+EEA +++L+ E+ Q+++ V KSR+ V N
Sbjct: 120 IREYSHQEMVEIALIENIQRENLNPIEEAQAFKRLLEEFQLKQDEVAERVSKSRTAVTNS 179
Query: 173 LRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
+R+LKL V++MI + IS GHAR L+ LA I +K+SVR+TE+LV++
Sbjct: 180 MRLLKLDEKVQQMIIDDMISTGHARALLAIEDKEQQYILANKIFDEKLSVRETEKLVKDL 239
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKI 288
K+++ K + + DLE+K+ S +G +S+ + KG+ I+Y ++E+L+
Sbjct: 240 KKPKKEKTKKDTSN---DFIYRDLEEKMRSVIGTKVSVNQKSKGKGKIEIEYYSDEELEH 296
Query: 289 ICSLL 293
I ++
Sbjct: 297 IFEMI 301
>gi|282878231|ref|ZP_06287027.1| ParB-like protein [Prevotella buccalis ATCC 35310]
gi|281299649|gb|EFA92022.1| ParB-like protein [Prevotella buccalis ATCC 35310]
Length = 302
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 14/300 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S++ LGRGL ALI S + + + + I I NP+ PR F+ E
Sbjct: 8 SHSTKAPALGRGLDALI--------STDNIQTQGSSTINEVPIEQIEANPNQPRREFDQE 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LE+L SI+ GIIQP+ +R + Y+I+AGERR+RA+++ L +P IR +D+++
Sbjct: 60 ALEELASSIREIGIIQPITLRQVAADKYQIVAGERRWRASQIVGLEAIPAYIRTIDDETV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE+L+ + G TQ + VGKSR+ + N LR+LKLP+
Sbjct: 120 MEMALVENIQREDLNAIEIALAYEKLMEKSGMTQEKVSKHVGKSRTAITNYLRLLKLPAQ 179
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDN--KKEKR 236
V+ ++K+EI +GHAR L++ P + + VR EEL Q+ N + K
Sbjct: 180 VQMALQKKEIDMGHARALLAVESPSMQIKLFKEVQKNGYPVRKVEELAQQLKNGGELRKS 239
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+K + L ++S+ + + + KG+ I + ++L+ + ++ +
Sbjct: 240 EKHSSVKGGLPEEFDVLRLRLSTFLKTKVQMTCSAKGKGKISIPFANEQELERLMNIFDK 299
>gi|319638943|ref|ZP_07993701.1| chromosome-partitioning protein parB [Neisseria mucosa C102]
gi|317399847|gb|EFV80510.1| chromosome-partitioning protein parB [Neisseria mucosa C102]
Length = 286
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 104/299 (34%), Positives = 170/299 (56%), Gaps = 19/299 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +K LGRGL +LI S S + ++I I P + R +
Sbjct: 1 MAK--AKGGLGRGLDSLISNAVDSSSS---------DRLTTVAIADIQPGRYQARVQMDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ GIIQP+IVR Y++IAGERR+RA+++A L+E+PV+I+ + +++
Sbjct: 50 EALQELADSIKAQGIIQPVIVRERGLSQYELIAGERRWRASQLAGLTEIPVVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAKAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ D L LAQ V SVR+ E ++ +K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLHVVDQLELAQKTVKNGWSVREVERR-----SQLAHQKA 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLGEN 296
E ++ + + ++ +G+N +K N KG+ + ++T E + + LG N
Sbjct: 225 KPEAAKTISPDIRRINDALTEHLGVNAEVKTSNQKKGKIVLHFDTPETFEYLLKQLGIN 283
>gi|297193303|ref|ZP_06910701.1| chromosome-partitioning protein parB [Streptomyces
pristinaespiralis ATCC 25486]
gi|297151729|gb|EDY62288.2| chromosome-partitioning protein parB [Streptomyces
pristinaespiralis ATCC 25486]
Length = 359
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 94/340 (27%), Positives = 155/340 (45%), Gaps = 53/340 (15%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPES-------------------------------- 38
GRGL ALI Q E P +
Sbjct: 2 GRGLGALIPAAPQEKQPTASGAEASPGASPVLTAERGVAAAKVATLPAATVTPQGAAPAH 61
Query: 39 ----------------QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
+ + +I PNP PR F+ + L +L SIK G++QP++VR
Sbjct: 62 EEDTAGTSVSAPAGAHFAEVPLGTITPNPRQPREVFDEDALAELVTSIKEVGLLQPVVVR 121
Query: 83 AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
+ Y++I GERR+RA + A L +P I+R+ D++ L A++EN+ R LNPLEEA
Sbjct: 122 QLGPDRYELIMGERRWRACREAGLERIPAIVRDTDDEKLLLDALLENLHRAQLNPLEEAA 181
Query: 143 GYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV-- 200
Y+QL+ ++ T + + +G+SR V+N LR+L+L V+ + +S GHAR L+
Sbjct: 182 AYDQLLKDFNCTHDQLADRIGRSRPQVSNTLRLLRLSPPVQRRVAAGVLSAGHARALLSV 241
Query: 201 -STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF--EGSREKEKYLTDLEKKI 257
+ + LA IV++ +SVR EE+V ++ + K LTDL ++
Sbjct: 242 DDSDEQDRLAHRIVAEGLSVRAVEEIVTLLNSNPKTASKPKGPRAGARVSPALTDLASRL 301
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
S + + + KG+ +++ + + L+ I L +
Sbjct: 302 SDRFETRVKVDLGQKKGKIVVEFASMDDLERILGTLAPGE 341
>gi|326797436|ref|YP_004315256.1| parB-like partition protein [Marinomonas mediterranea MMB-1]
gi|326548200|gb|ADZ93420.1| parB-like partition protein [Marinomonas mediterranea MMB-1]
Length = 295
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 106/294 (36%), Positives = 174/294 (59%), Gaps = 10/294 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPE--SQDCISIHSIVPNPHNPRNYFESEG 62
KR LGRGL AL+ +++ + E + + + + PR
Sbjct: 3 VKKRGLGRGLDALLAPKTPTVEDGDANLEQTEQIKGLTYLPLDWLAKGKFQPRRDMNPAQ 62
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L++L SI+ GI+QP++VR I++ Y+IIAGERR+RAA++A L +VPVI+R+V++ ++
Sbjct: 63 LDELANSIRQQGIMQPIVVRPIEDQKYEIIAGERRWRAARIAELEQVPVIVRHVEDSDAV 122
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
+A++EN+QR+DLNP+EEAL ++LI E+ TQ ++ VGKSRS V N+LR+L L + V
Sbjct: 123 VLALIENIQREDLNPIEEALALQRLIEEFHLTQQEVADTVGKSRSAVTNLLRLLGLSAEV 182
Query: 183 REMIRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
R ++ +I +GHAR L+ S+ + A +V+K +SVR+TE+LV+ + E +
Sbjct: 183 RRLLEHGDIEMGHARALLPLEHSEQIQAASQVVTKSLSVRETEKLVRNLQSGNENENEKV 242
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
E ++ +KIS K+ + I+ KG+ I+Y E L+++ S L
Sbjct: 243 ELL-----DYSEQAEKISQKINAQVKIQQSPKGKGKVVIEYRNPEHLELLISEL 291
>gi|167635056|ref|ZP_02393373.1| stage 0 sporulation protein J [Bacillus anthracis str. A0442]
gi|170689469|ref|ZP_02880659.1| stage 0 sporulation protein J [Bacillus anthracis str. A0465]
gi|196036114|ref|ZP_03103514.1| stage 0 sporulation protein J [Bacillus cereus W]
gi|218906671|ref|YP_002454505.1| stage 0 sporulation protein J [Bacillus cereus AH820]
gi|254687080|ref|ZP_05150938.1| chromosome segregation DNA-binding protein [Bacillus anthracis str.
CNEVA-9066]
gi|254724137|ref|ZP_05185922.1| chromosome segregation DNA-binding protein [Bacillus anthracis str.
A1055]
gi|254742137|ref|ZP_05199824.1| chromosome segregation DNA-binding protein [Bacillus anthracis str.
Kruger B]
gi|301056953|ref|YP_003795164.1| stage 0 sporulation protein J [Bacillus anthracis CI]
gi|167529530|gb|EDR92280.1| stage 0 sporulation protein J [Bacillus anthracis str. A0442]
gi|170666571|gb|EDT17344.1| stage 0 sporulation protein J [Bacillus anthracis str. A0465]
gi|195991281|gb|EDX55249.1| stage 0 sporulation protein J [Bacillus cereus W]
gi|218535736|gb|ACK88134.1| stage 0 sporulation protein J [Bacillus cereus AH820]
gi|300379122|gb|ADK08026.1| stage 0 sporulation protein J [Bacillus cereus biovar anthracis
str. CI]
Length = 283
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 168/294 (57%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I I + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETVQEIVITELRPNPYQPRKHFNKEAIQELS 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 53 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVK--K 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I++ E L I LL + +
Sbjct: 230 ERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN 283
>gi|206975886|ref|ZP_03236797.1| stage 0 sporulation protein J [Bacillus cereus H3081.97]
gi|206745980|gb|EDZ57376.1| stage 0 sporulation protein J [Bacillus cereus H3081.97]
Length = 283
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 104/294 (35%), Positives = 172/294 (58%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I+I + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETIQEITITELRPNPYQPRKHFNKEAIQELS 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 53 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHARTLVSTSDP---LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H RTL++ D SL + I + ++VR E++VQE + + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEELLKSLLKRIEKEGLNVRQLEKIVQEINQRVSRETKQVK--K 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G + IK + KG+ I++ E L I LL + +
Sbjct: 230 ERNIFFVERETFLREKFGTEVKIKETKKEKGKIEIEFFNKEDLNRILELLAQQN 283
>gi|51473284|ref|YP_067041.1| chromosome partitioning protein ParB (Spo0J protein) [Rickettsia
typhi str. Wilmington]
gi|81610840|sp|Q68XT3|PARB_RICTY RecName: Full=Probable chromosome-partitioning protein parB
gi|51459596|gb|AAU03559.1| chromosome partitioning protein ParB (Spo0J protein) [Rickettsia
typhi str. Wilmington]
Length = 286
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 107/298 (35%), Positives = 172/298 (57%), Gaps = 21/298 (7%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL++L+GE I S E I+I I PN + PR +FE ++
Sbjct: 2 VKNKGLGRGLSSLLGEEVLPIKS---------EIVQIINIDKIKPNENQPRKHFEYNKIK 52
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI ++G++QP+IV + ++IIAGERR+RA K+A + E+PVII+N D + S+E
Sbjct: 53 ELADSILNNGLLQPIIV----DNNFQIIAGERRWRACKLAQVLEIPVIIKNFDTRESMET 108
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR DL +EEA G++ L+ + YT + +GKSRSH+AN+LR+ LP S+++
Sbjct: 109 ALIENIQRTDLTVMEEARGFKYLVDNFNYTVEKLAERLGKSRSHIANLLRLNNLPQSIQD 168
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ + +S+GHAR L++ +A I++ ++VR TE LV++ + K+
Sbjct: 169 KLNENILSMGHARCLINHEYAEEIANHIINHDLNVRQTEALVRQWHKNEYKKSTNNTNKV 228
Query: 245 EK--------EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
K + L L K +S K G+ I+I + N G+ Y+ E+L +I S L
Sbjct: 229 GKLCFKDNIIDNDLELLVKALSKKFGIKITIDNCNLGGKLMFHYKDLEELDLILSKLN 286
>gi|294630330|ref|ZP_06708890.1| ParB family protein [Streptomyces sp. e14]
gi|292833663|gb|EFF92012.1| ParB family protein [Streptomyces sp. e14]
Length = 365
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 89/283 (31%), Positives = 150/283 (53%), Gaps = 5/283 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + E + I + +I PNP PR F+ + L +L SIK G++QP+
Sbjct: 63 EEPSPSGAAELPAPPMGAHFAEIPLDAITPNPRQPREVFDEDALAELITSIKEVGLLQPV 122
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + Y++I GERR+RA + A L +P I+R D++ L A++EN+ R LNPLE
Sbjct: 123 VVRQLGPERYELIMGERRWRACREAGLEAIPAIVRATDDEKLLLDALLENLHRAQLNPLE 182
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+QL+ ++ T + + +G+SR V+N LR+LKL +V+ + +S GHAR L
Sbjct: 183 EAAAYDQLLKDFSCTHDQLADRIGRSRPQVSNTLRLLKLSPAVQRRVAAGVLSAGHARAL 242
Query: 200 V---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE--KRKKIFEGSREKEKYLTDLE 254
+ + + LA IV++ +SVR EE+V ++ + +R K L+DL
Sbjct: 243 LSVEDSEEQDRLAHRIVAEGLSVRAVEEIVTLMGSRPKAAQRSKGPRAGGRVSPALSDLA 302
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L+ I L +
Sbjct: 303 TRLSDRFETRVKVDLGQKKGKITVEFASMEDLERILGTLAPGE 345
>gi|320009742|gb|ADW04592.1| parB-like partition protein [Streptomyces flavogriseus ATCC 33331]
Length = 366
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 147/284 (51%), Gaps = 5/284 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ ++T++ I + SI PNP PR F+ + L +L SIK G++QP
Sbjct: 65 SSPVGEREPAAEQTDSAGAYFAEIPLASITPNPKQPREVFDEDALAELVTSIKEVGLLQP 124
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR + + Y++I GERR+RA A L +P I+R D++ L A++EN+ R LNPL
Sbjct: 125 VVVRKVADDRYELIMGERRWRACGEAGLERIPAIVRATDDEKLLLDALLENLHRAQLNPL 184
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ ++ T + + +G+SR V+N LR+L+L V+ + IS GHAR
Sbjct: 185 EEAAAYDQLLKDFKCTHDQLADRIGRSRPQVSNTLRLLRLSPPVQRRVAAGVISAGHARA 244
Query: 199 LV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR--EKEKYLTDL 253
L+ + + LA IV++ +SVR EE+V ++ K LTDL
Sbjct: 245 LLSVDDSDEQDRLAHRIVAEGLSVRAVEEIVNLLGSEPTSSAKPRGPRAGGRVSPALTDL 304
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L I L +
Sbjct: 305 ASRLSDRFETRVKVDLGQKKGKIVVEFASMEDLDRILGSLAPGE 348
>gi|47568678|ref|ZP_00239375.1| chromosome partitioning protein ParB family [Bacillus cereus G9241]
gi|47554666|gb|EAL13020.1| chromosome partitioning protein ParB family [Bacillus cereus G9241]
Length = 285
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 169/294 (57%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I+I + PNP+ PR +F E +++L
Sbjct: 5 KGLGRGINVFFPDLDVKEE----------ETIQEITITELRPNPYQPRKHFNKEAIQELS 54
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 55 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 113
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 114 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 173
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + K + +
Sbjct: 174 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVK--K 231
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I++ E L I LL + +
Sbjct: 232 ERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN 285
>gi|312115374|ref|YP_004012970.1| parB-like partition protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220503|gb|ADP71871.1| parB-like partition protein [Rhodomicrobium vannielii ATCC 17100]
Length = 308
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 113/289 (39%), Positives = 175/289 (60%), Gaps = 6/289 (2%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
RLGRGLA+LIG+ + + I + P+ NPR F L++L
Sbjct: 18 SRLGRGLASLIGDATPIGTP---RIIAANGEIRQVPIDRVRPSAFNPRKNFNEAELDELA 74
Query: 68 QSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
SI+ G++QP++VR D Y+I+AGERR+RAA+ ASL VPVI+R++ ++ +LE+A
Sbjct: 75 GSIREKGLVQPIVVRPADAAQTSYEIVAGERRWRAAQRASLHTVPVIVRSLSDQEALELA 134
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
I+ENVQR DLN +EEA GY++L+ +GYTQ ++ I+GKSRSH+AN +R+LKLP V+ +
Sbjct: 135 IIENVQRADLNAIEEAGGYKELVERFGYTQEELAGIIGKSRSHLANTMRLLKLPEPVQVL 194
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+R +S GHAR L+ D ++A IV K ++VRD E LV + + K + +
Sbjct: 195 VRDGSLSAGHARALIGREDAETVALDIVKKGLNVRDVEALVMGKKASEGKAPTAKAAAPQ 254
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICSLL 293
K+ E+ +S +GL++ + + G+ I+Y+T EQ ++I L
Sbjct: 255 KDADSRAAERDMSDALGLSVVMNPGSGEAGEVIIRYKTLEQFQVIYRAL 303
>gi|217962971|ref|YP_002341549.1| stage 0 sporulation protein J [Bacillus cereus AH187]
gi|217065307|gb|ACJ79557.1| stage 0 sporulation protein J [Bacillus cereus AH187]
Length = 283
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 103/294 (35%), Positives = 172/294 (58%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I+I + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETIQEITITELRPNPYQPRKHFNKEAIQELS 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 53 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHARTLVSTSDPLS---LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H RTL++ D L + I + ++VR E++VQE + + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKALLKRIEKEGLNVRQLEKIVQEINQRVSRETKQVK--K 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I++ E L I LL + +
Sbjct: 230 ERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN 283
>gi|15843551|ref|NP_338588.1| ParB family protein [Mycobacterium tuberculosis CDC1551]
gi|31795090|ref|NP_857583.1| chromosome partitioning protein ParB [Mycobacterium bovis
AF2122/97]
gi|57117170|ref|NP_218435.2| chromosome partitioning protein ParB [Mycobacterium tuberculosis
H37Rv]
gi|121635903|ref|YP_976126.1| putative chromosome partitioning protein parB [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|121639828|ref|YP_980052.1| putative chromosome partitioning protein parB [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148663784|ref|YP_001285307.1| putative chromosome partitioning protein ParB [Mycobacterium
tuberculosis H37Ra]
gi|148825125|ref|YP_001289879.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
F11]
gi|167969455|ref|ZP_02551732.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
H37Ra]
gi|215405975|ref|ZP_03418156.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
02_1987]
gi|215413845|ref|ZP_03422510.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
94_M4241A]
gi|215425179|ref|ZP_03423098.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T92]
gi|215432898|ref|ZP_03430817.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
EAS054]
gi|215448264|ref|ZP_03435016.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T85]
gi|218755709|ref|ZP_03534505.1| chromosome partitioning protein parB [Mycobacterium tuberculosis GM
1503]
gi|224992323|ref|YP_002647013.1| putative chromosome partitioning protein [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253800967|ref|YP_003033969.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
KZN 1435]
gi|254233399|ref|ZP_04926725.1| chromosome partitioning protein parB [Mycobacterium tuberculosis C]
gi|254366453|ref|ZP_04982497.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
str. Haarlem]
gi|254548921|ref|ZP_05139368.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260184847|ref|ZP_05762321.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
CPHL_A]
gi|260198977|ref|ZP_05766468.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T46]
gi|260203130|ref|ZP_05770621.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
K85]
gi|289441360|ref|ZP_06431104.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T46]
gi|289445518|ref|ZP_06435262.1| chromosome partitioning protein parA [Mycobacterium tuberculosis
CPHL_A]
gi|289556185|ref|ZP_06445395.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
KZN 605]
gi|289572569|ref|ZP_06452796.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
K85]
gi|289747761|ref|ZP_06507139.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
02_1987]
gi|289748455|ref|ZP_06507833.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T92]
gi|289756052|ref|ZP_06515430.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
EAS054]
gi|289760090|ref|ZP_06519468.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T85]
gi|289764108|ref|ZP_06523486.1| chromosome partitioning protein parB [Mycobacterium tuberculosis GM
1503]
gi|294995599|ref|ZP_06801290.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
210]
gi|297636604|ref|ZP_06954384.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
KZN 4207]
gi|297733599|ref|ZP_06962717.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
KZN R506]
gi|298527389|ref|ZP_07014798.1| ParB family protein [Mycobacterium tuberculosis 94_M4241A]
gi|306778281|ref|ZP_07416618.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu001]
gi|306778811|ref|ZP_07417148.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu002]
gi|306786838|ref|ZP_07425160.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu003]
gi|306786967|ref|ZP_07425289.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu004]
gi|306791522|ref|ZP_07429824.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu005]
gi|306795587|ref|ZP_07433889.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu006]
gi|306801562|ref|ZP_07438230.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu008]
gi|306805771|ref|ZP_07442439.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu007]
gi|306970168|ref|ZP_07482829.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu009]
gi|306974400|ref|ZP_07487061.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu010]
gi|307082108|ref|ZP_07491278.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu011]
gi|307086719|ref|ZP_07495832.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu012]
gi|313660930|ref|ZP_07817810.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
KZN V2475]
gi|61229777|sp|P0A5R2|PARB_MYCTU RecName: Full=Probable chromosome-partitioning protein parB
gi|61229778|sp|P0A5R3|PARB_MYCBO RecName: Full=Probable chromosome-partitioning protein parB
gi|13883929|gb|AAK48402.1| ParB family protein [Mycobacterium tuberculosis CDC1551]
gi|31620688|emb|CAD96134.1| PROBABLE CHROMOSOME PARTITIONING PROTEIN PARB [Mycobacterium bovis
AF2122/97]
gi|38490394|emb|CAA16231.2| PROBABLE CHROMOSOME PARTITIONING PROTEIN PARB [Mycobacterium
tuberculosis H37Rv]
gi|121491550|emb|CAL70007.1| Probable chromosome partitioning protein parB [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|121495476|emb|CAL73965.1| Probable chromosome partitioning protein parB [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124603192|gb|EAY61467.1| chromosome partitioning protein parB [Mycobacterium tuberculosis C]
gi|134151965|gb|EBA44010.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
str. Haarlem]
gi|148507936|gb|ABQ75745.1| putative chromosome partitioning protein ParB [Mycobacterium
tuberculosis H37Ra]
gi|148723652|gb|ABR08277.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
F11]
gi|224775439|dbj|BAH28245.1| putative chromosome partitioning protein [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253322471|gb|ACT27074.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
KZN 1435]
gi|289414279|gb|EFD11519.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T46]
gi|289418476|gb|EFD15677.1| chromosome partitioning protein parA [Mycobacterium tuberculosis
CPHL_A]
gi|289440817|gb|EFD23310.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
KZN 605]
gi|289537000|gb|EFD41578.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
K85]
gi|289688289|gb|EFD55777.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
02_1987]
gi|289689042|gb|EFD56471.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T92]
gi|289696639|gb|EFD64068.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
EAS054]
gi|289711614|gb|EFD75630.1| chromosome partitioning protein parB [Mycobacterium tuberculosis GM
1503]
gi|289715654|gb|EFD79666.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T85]
gi|298497183|gb|EFI32477.1| ParB family protein [Mycobacterium tuberculosis 94_M4241A]
gi|308213431|gb|EFO72830.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu001]
gi|308328148|gb|EFP16999.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu002]
gi|308328610|gb|EFP17461.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu003]
gi|308336265|gb|EFP25116.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu004]
gi|308339871|gb|EFP28722.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu005]
gi|308343883|gb|EFP32734.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu006]
gi|308347667|gb|EFP36518.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu007]
gi|308351585|gb|EFP40436.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu008]
gi|308352292|gb|EFP41143.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu009]
gi|308356295|gb|EFP45146.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu010]
gi|308360182|gb|EFP49033.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu011]
gi|308363869|gb|EFP52720.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
SUMu012]
gi|323717333|gb|EGB26538.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
CDC1551A]
gi|326905750|gb|EGE52683.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
W-148]
gi|328460695|gb|AEB06118.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
KZN 4207]
Length = 344
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 91/330 (27%), Positives = 159/330 (48%), Gaps = 37/330 (11%)
Query: 1 MSNNYSKRR-LGRGLAALIGEVNQSIDS--------------------PEKKTETIPESQ 39
M+ ++ LGRGLAALI +S P T +
Sbjct: 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL----YKIIAGE 95
I +I NP PR F+ E L +L SI+ G++QP++VR++ Y+I+ GE
Sbjct: 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAA+ A L+ +P I+R + + L A++EN+ R LNPLEEA Y+QL+ E+G T
Sbjct: 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+++ + +G+SR + N++R+LKLP V+ + +S GHAR L+S + + S+
Sbjct: 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
Query: 216 -------KMSVRDTEELVQEQDNKKEKR-----KKIFEGSREKEKYLTDLEKKISSKVGL 263
+ +T L + N++ + L D+ +++S+
Sbjct: 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
Query: 264 NISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+++ KG+ +++ + + L I L+
Sbjct: 301 RVTVSLGKRKGKIVVEFGSVDDLARIVGLM 330
>gi|29349409|ref|NP_812912.1| putative chromosome partitioning protein parB [Bacteroides
thetaiotaomicron VPI-5482]
gi|253570240|ref|ZP_04847649.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298384937|ref|ZP_06994496.1| spoOJ protein [Bacteroides sp. 1_1_14]
gi|29341318|gb|AAO79106.1| putative chromosome partitioning protein parB [Bacteroides
thetaiotaomicron VPI-5482]
gi|251840621|gb|EES68703.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298262081|gb|EFI04946.1| spoOJ protein [Bacteroides sp. 1_1_14]
Length = 296
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 156/299 (52%), Gaps = 16/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ S + S I + I NP+ PR F+
Sbjct: 1 MAT-QKRNALGRGLDALL--------SMDDVKTEGSSSISEIELAKITVNPNQPRREFDQ 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R + + Y+IIAGERR+RA++ A L +P IR D+++
Sbjct: 52 TALQELADSIAEIGIIQPITLRKLSDDEYQIIAGERRYRASQKAGLKTIPAYIRTADDEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ L+ +Y TQ + +GK+R+ +AN LR+LKLP+
Sbjct: 112 MMEMALIENIQREDLNAVEIALAYQHLLDQYELTQERLSERIGKNRTTIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
++ ++ +++ +GHAR L+S Q V + + + E + K
Sbjct: 172 PIQMALQNKQLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKS 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+KI + + L+++++ + + KG+ I + E+L+ I +
Sbjct: 232 GTRKITPKRSKLPEEFNLLKQQLTGFFNTKVQLTCSEKGKGKISIPFSNEEELERIMEI 290
>gi|239930183|ref|ZP_04687136.1| ParB-like protein [Streptomyces ghanaensis ATCC 14672]
Length = 317
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 88/283 (31%), Positives = 150/283 (53%), Gaps = 5/283 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + + + + + +I PNP PR F+ + L +L SIK G++QP+
Sbjct: 17 EDPSANGASATPAPPVGAHFAEVPLDAITPNPRQPREVFDEDALSELITSIKEVGLLQPV 76
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + Y++I GERR+RA + A L +P I+R D++ L A++EN+ R LNPLE
Sbjct: 77 VVRQVGPARYELIMGERRWRACREAGLETIPAIVRATDDEKLLLDALLENLHRAQLNPLE 136
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+QL+ ++ T + + +G+SR V+N LR+LKL +V+ + +S GHAR L
Sbjct: 137 EAAAYDQLLKDFNCTHDQLADRIGRSRPQVSNTLRLLKLSPAVQRRVAAGVLSAGHARAL 196
Query: 200 V---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE--KRKKIFEGSREKEKYLTDLE 254
+ + + LA IV++ +SVR EE+V ++ + +R K LTDL
Sbjct: 197 LSVEDSEEQERLAHRIVAEGLSVRAVEEIVTLMGSRPQKAQRSKGPRAGARVSPALTDLA 256
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L+ I L +
Sbjct: 257 TRLSDRFETRVKVDLGQKKGKITVEFASMEDLERILGTLAPGE 299
>gi|52145287|ref|YP_086744.1| stage 0 sporulation protein J [Bacillus cereus E33L]
gi|51978756|gb|AAU20306.1| stage 0 sporulation protein J [Bacillus cereus E33L]
Length = 283
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 168/294 (57%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I I + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETIQEILITELRPNPYQPRKHFNKEAIQELS 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 53 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVK--K 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I++ E L I LL + +
Sbjct: 230 ERNIFFVERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN 283
>gi|42784675|ref|NP_981922.1| stage 0 sporulation protein J [Bacillus cereus ATCC 10987]
gi|42740607|gb|AAS44530.1| stage 0 sporulation protein J [Bacillus cereus ATCC 10987]
gi|324329430|gb|ADY24690.1| stage 0 sporulation protein J [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 283
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 169/294 (57%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I+I + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETIQEITITELRPNPYQPRKHFNKEAIQELS 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 53 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQRVSRETKQVK--K 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G + IK + KG+ I++ E L I LL + +
Sbjct: 230 ERNIFFVERETFLREKFGTEVKIKETKKEKGKIEIEFFNKEDLNRILELLAQQN 283
>gi|254298694|ref|ZP_04966145.1| ParB family protein [Burkholderia pseudomallei 406e]
gi|157808623|gb|EDO85793.1| ParB family protein [Burkholderia pseudomallei 406e]
Length = 286
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 103/289 (35%), Positives = 175/289 (60%), Gaps = 10/289 (3%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
GRGL AL+G ++ I + + +++ + + PR + L++L SI
Sbjct: 2 GRGLEALLGGSADITEAV-----KIEGAPNVLALGKLQAGKYQPRTRMDEGSLQELAASI 56
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
++ G++QP++VR I + Y+IIAGERRFRAA++A L EVPV++++V ++++ +A++EN+
Sbjct: 57 RAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQAAAAMALIENI 116
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
QR+DLNPLEEA G ++L+ E+G+T VG+SRS V+N+LR+L L V+ M+ +
Sbjct: 117 QREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAMPVQTMLLAGD 176
Query: 191 ISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
+ +GHAR L V + ++LA +V+K+MSVR+TE+LV + K + ++
Sbjct: 177 LDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKAEPAVKARAKDDGGRD- 235
Query: 249 YLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
LE+++S + N+ IK R +GQ I + + L+ I + L N
Sbjct: 236 -TRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGN 283
>gi|291438525|ref|ZP_06577915.1| ParB [Streptomyces ghanaensis ATCC 14672]
gi|291341420|gb|EFE68376.1| ParB [Streptomyces ghanaensis ATCC 14672]
Length = 366
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 88/283 (31%), Positives = 150/283 (53%), Gaps = 5/283 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + + + + + +I PNP PR F+ + L +L SIK G++QP+
Sbjct: 66 EDPSANGASATPAPPVGAHFAEVPLDAITPNPRQPREVFDEDALSELITSIKEVGLLQPV 125
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + Y++I GERR+RA + A L +P I+R D++ L A++EN+ R LNPLE
Sbjct: 126 VVRQVGPARYELIMGERRWRACREAGLETIPAIVRATDDEKLLLDALLENLHRAQLNPLE 185
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+QL+ ++ T + + +G+SR V+N LR+LKL +V+ + +S GHAR L
Sbjct: 186 EAAAYDQLLKDFNCTHDQLADRIGRSRPQVSNTLRLLKLSPAVQRRVAAGVLSAGHARAL 245
Query: 200 V---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE--KRKKIFEGSREKEKYLTDLE 254
+ + + LA IV++ +SVR EE+V ++ + +R K LTDL
Sbjct: 246 LSVEDSEEQERLAHRIVAEGLSVRAVEEIVTLMGSRPQKAQRSKGPRAGARVSPALTDLA 305
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L+ I L +
Sbjct: 306 TRLSDRFETRVKVDLGQKKGKITVEFASMEDLERILGTLAPGE 348
>gi|118480506|ref|YP_897657.1| chromosome segregation DNA-binding protein [Bacillus thuringiensis
str. Al Hakam]
gi|118419731|gb|ABK88150.1| chromosome segregation DNA-binding protein [Bacillus thuringiensis
str. Al Hakam]
Length = 285
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 168/294 (57%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I I + PNP+ PR +F E +++L
Sbjct: 5 KGLGRGINVFFPDLDVKEE----------ETIQEIVITELRPNPYQPRKHFNKEAIQELS 54
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 55 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 113
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 114 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 173
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + K + +
Sbjct: 174 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVK--K 231
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I++ E L I LL + +
Sbjct: 232 ERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN 285
>gi|34496119|ref|NP_900334.1| chromosome partitioning protein ParB [Chromobacterium violaceum
ATCC 12472]
gi|34101973|gb|AAQ58340.1| chromosome partitioning protein ParB [Chromobacterium violaceum
ATCC 12472]
Length = 265
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 99/264 (37%), Positives = 166/264 (62%), Gaps = 6/264 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + I SI P + PR++ L++L SI++ GIIQPLIVR + G Y++IAGE
Sbjct: 2 DDRLSTLPIDSIRPGKYQPRSFMNEAALDELAASIRAQGIIQPLIVRELGLGDYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RA++ A LSEVPV+I++V ++++L +A++EN+QR++L+P+EEA G ++LI E+G T
Sbjct: 62 RRWRASRKAGLSEVPVVIKSVPDEAALAMALIENIQRQELDPIEEAQGIKRLIDEFGLTH 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIV 213
VG+SRS V+N+LR+L LP +++M+ + ++ +GHAR L + T L LA +V
Sbjct: 122 EAAADAVGRSRSAVSNLLRLLVLPQPLQQMMHEGQLEMGHARALLSLPTVSQLELANEVV 181
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNN 272
K MSVR+ E VQ+ + + + + + + LE+++S +G +SI+H
Sbjct: 182 RKGMSVREVERRVQQHAAQ---KTTVAPQQKRVDPDVARLEEQVSEAIGARVSIRHAAGG 238
Query: 273 KGQFCIKYETNEQLKIICSLLGEN 296
G+ I Y + ++L + L +N
Sbjct: 239 SGKLVIDYASLDELDSLLEKLQKN 262
>gi|255690429|ref|ZP_05414104.1| spoOJ protein [Bacteroides finegoldii DSM 17565]
gi|260624051|gb|EEX46922.1| spoOJ protein [Bacteroides finegoldii DSM 17565]
Length = 296
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 93/299 (31%), Positives = 157/299 (52%), Gaps = 16/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ S + S + I + I NP+ PR F+
Sbjct: 1 MAT-QRRNALGRGLDALL--------SMDDVKTEGSSSINEIELAKIAVNPNQPRREFDE 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R I + Y+IIAGERR+RA++ A L +P IR D+++
Sbjct: 52 TALQELADSIAEIGIIQPITLRKISDDEYQIIAGERRYRASQKAGLKTIPAYIRTADDEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ L+ +Y TQ + +GK+R+ +AN LR+LKLP+
Sbjct: 112 MMEMALIENIQREDLNAVEIALAYQHLLDQYELTQERLSERIGKNRTTIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVS------TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
++ ++ +++ +GHAR L+S Q V + + + E + K
Sbjct: 172 PIQMALQNKQLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKS 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+KI + + L+K++S + + KG+ I + E+L+ I +
Sbjct: 232 GTRKITPKRAKLPEEFNLLKKQLSGFFNTKVQLTCSEKGKGKISIPFGNEEELERIMEI 290
>gi|296118597|ref|ZP_06837175.1| ParA [Corynebacterium ammoniagenes DSM 20306]
gi|295968496|gb|EFG81743.1| ParA [Corynebacterium ammoniagenes DSM 20306]
Length = 382
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 89/276 (32%), Positives = 148/276 (53%), Gaps = 3/276 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + K +I + I I I PNP PR F+ E L +L SI+ G++QP++
Sbjct: 97 STSNSKKRQPKPASIGATYREIPIGEIQPNPKQPRTVFDEEELNELVHSIREFGLLQPVV 156
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR G +++I GERR+RAA A L+ +P I+R+ + S L A++EN+ R LNPLEE
Sbjct: 157 VRPSGQGGFELIMGERRWRAAAKAGLATIPAIVRDTQDDSLLRDALLENIHRVQLNPLEE 216
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+QL+ E+ TQN++ +G+SR + N +R+L+LP V+ + +S GHAR L+
Sbjct: 217 AHAYQQLLEEFDVTQNELADRIGRSRPQITNTIRLLRLPVEVQRRVAAGVLSSGHARALL 276
Query: 201 ---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
LA IV++ +SVR TEE V + ++ + + T +++
Sbjct: 277 GLDDKDVMDKLASRIVAEGLSVRATEEAVTLIKRNGMPDAPQPKPAQPQPEIYTHAGERL 336
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
S + +++ KG+ +++ E + I SL+
Sbjct: 337 SDRFDTKVTVTMGKRKGKMVVEFGDQEDFERIMSLI 372
>gi|308274530|emb|CBX31129.1| Stage 0 sporulation protein J [uncultured Desulfobacterium sp.]
Length = 296
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 118/295 (40%), Positives = 177/295 (60%), Gaps = 14/295 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S K LG+GL ALI ++ E + I+PN + PR +F +
Sbjct: 9 SKFKKKIALGKGLGALIPGIDTD--------EQESGKHIICDVGLIIPNQYQPRIHFSEK 60
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LE+L QSIK GIIQPL+ R +G +++IAGERR RAAKMA L++VP+I++NV +
Sbjct: 61 ELEELSQSIKEKGIIQPLLARK-SSGGFELIAGERRLRAAKMAGLAQVPLILKNVSDAEM 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
LEI+I+EN+QR++LNP+EEA Y L++E+ TQ + VGKSR VANILR+ +LP+
Sbjct: 120 LEISIIENIQRENLNPIEEAEAYHCLMTEFNLTQEEASQRVGKSRPAVANILRLRQLPNQ 179
Query: 182 VREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++E + IS+GHAR L+ + + + + +VSK +SVRDTE L++ K +K
Sbjct: 180 IKESLSDGTISMGHARALLGADTPAQQNAAWRYVVSKGLSVRDTENLIKRLKTDKTGKKT 239
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ S + Y LE ++SS G I+IK + +G+ I++ +NE L + S L
Sbjct: 240 TEKSSE--DIYFLSLEDELSSHFGTKIAIKRQGKRGKIEIEFYSNEDLDNLISRL 292
>gi|282863327|ref|ZP_06272386.1| parB-like partition protein [Streptomyces sp. ACTE]
gi|282561662|gb|EFB67205.1| parB-like partition protein [Streptomyces sp. ACTE]
Length = 364
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 88/284 (30%), Positives = 148/284 (52%), Gaps = 5/284 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
++S T++ I + I PNP PR F+ + L +L SIK G++QP
Sbjct: 64 PSSPGDLESVVGGTDSAGAYFAEIPLSQITPNPKQPRVVFDQDALAELVTSIKEVGLLQP 123
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR + + Y++I GERR+RA A L ++P I+R D++ L A++EN+ R LNPL
Sbjct: 124 VVVRKVADERYELIMGERRWRACGEAGLEDIPAIVRATDDEKLLLDALLENLHRAQLNPL 183
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ ++ T + + +G+SR V+N LR+L+L V+ + +S GHAR
Sbjct: 184 EEAAAYDQLLKDFNCTHDQLADRIGRSRPQVSNTLRLLRLSPPVQRRVAAGVLSAGHARA 243
Query: 199 LV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR--EKEKYLTDL 253
L+ + + LA IV++ +SVR EE+V + ++ K LTDL
Sbjct: 244 LLSLDDSEEQDRLAHRIVAEGLSVRAVEEIVNLRGSELASSAKPKGPRAGGRVSPALTDL 303
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L I L +
Sbjct: 304 ASRLSDRFETRVKVDLGQKKGKIVVEFASMEDLDRILGSLAPGE 347
>gi|303326116|ref|ZP_07356559.1| ParB family protein [Desulfovibrio sp. 3_1_syn3]
gi|302864032|gb|EFL86963.1| ParB family protein [Desulfovibrio sp. 3_1_syn3]
Length = 308
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 28/312 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MSN + LGRGL AL G + + I + PNP PR +F+
Sbjct: 1 MSNAS--KGLGRGLDALFGGSEPLREQS--------GDVSMLPITVLRPNPDQPRRHFDP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SIK+ GIIQPL+VR + DN Y+I+AGERR+RAA++A LS+VPV +R + +K
Sbjct: 51 ESLRELADSIKTQGIIQPLLVRPMADNATYQIVAGERRWRAARLAGLSQVPVFVRALSDK 110
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+ A++EN+QR+DLNP+EEAL + L TQ ++ + +GKSR +AN LR+L+L
Sbjct: 111 EVMAAALIENLQREDLNPIEEALALQGLREALELTQEELAARLGKSRPAIANALRLLQLS 170
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQ---VIVSKKMSVRDTEELVQEQDNKKEKR 236
+ +E +R +S GHAR L+ + + I+S ++VRD EE K
Sbjct: 171 PAAQEDLRAGRLSAGHARCLLGVNAVEATEALRLRIISHTLTVRDAEEAAAFWRENKIFP 230
Query: 237 --------------KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYET 282
+ +R+K + L++ +S + + G+ + Y +
Sbjct: 231 WEPESGQADAEAQKEPPARATRKKSPQIRKLQQNLSKALECKALVSGNEQTGKITLAYGS 290
Query: 283 NEQLKIICSLLG 294
E+L+ + + LG
Sbjct: 291 AEELQSLLARLG 302
>gi|298372341|ref|ZP_06982331.1| spoOJ protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275245|gb|EFI16796.1| spoOJ protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 292
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 99/296 (33%), Positives = 172/296 (58%), Gaps = 13/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K+ LGRGL ALI S E+ + I I I NP+ PR F+ + L
Sbjct: 1 MKKQALGRGLNALI--------STEEVKTYGSSDLNEIDIDLIETNPNQPRTEFDEDKLA 52
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+++G+I P+ +R ID+ Y+IIAGERR+RA+KMA L+++P IR +++ + +
Sbjct: 53 ELSDSIRANGVIVPITLRKIDDAHYQIIAGERRYRASKMAGLTKIPAYIRAANDEQTHVM 112
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR DLN +E ALGY++ ++++ TQ + VGK R+ +AN LR+LKLP+ ++
Sbjct: 113 ALIENIQRDDLNAIEIALGYQKAMNDFVLTQEQLSEKVGKKRATIANFLRLLKLPAEIQL 172
Query: 185 MIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQD-NKKEKRKKIF 240
+R + +GHAR + L + + +V K +SVR TEELV++ K ++
Sbjct: 173 GLRDRTVDMGHARAIAGLDDPESQLKVYEQVVKKHLSVRATEELVKKMAVGKNNGTEEGV 232
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ R + L+ ++S ++++ + KG+ + +++++ L I S+L +
Sbjct: 233 KYQRFVSEEYDRLKAELSQLFNTKVNLQYNEQGKGKISLAFDSDDDLMRIMSILDK 288
>gi|196045482|ref|ZP_03112713.1| stage 0 sporulation protein J [Bacillus cereus 03BB108]
gi|300118819|ref|ZP_07056539.1| stage 0 sporulation protein J [Bacillus cereus SJ1]
gi|196023689|gb|EDX62365.1| stage 0 sporulation protein J [Bacillus cereus 03BB108]
gi|298723787|gb|EFI64509.1| stage 0 sporulation protein J [Bacillus cereus SJ1]
Length = 283
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 168/294 (57%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I I + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETIQEIVITELRPNPYQPRKHFNKEAIQELS 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 53 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVK--K 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I++ E L I LL + +
Sbjct: 230 ERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN 283
>gi|291446140|ref|ZP_06585530.1| ParB [Streptomyces roseosporus NRRL 15998]
gi|291349087|gb|EFE75991.1| ParB [Streptomyces roseosporus NRRL 15998]
Length = 363
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 89/282 (31%), Positives = 146/282 (51%), Gaps = 5/282 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ D E+ T + I +I PNP PR F+ + L +L SIK G++QP++
Sbjct: 64 ASAPEDRSEQGVGTSGAYFAELPIGAITPNPRQPREVFDEDALAELVVSIKEVGLLQPVV 123
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR + Y++I GERR+RA + A L +P I+R D++ L A++EN+ R LNPLEE
Sbjct: 124 VRKVGPDSYELIMGERRWRACREAGLERIPTIVRATDDEKLLLDALLENLHRAQLNPLEE 183
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+QL+ ++ T + + +G+SR V+N LR+L+L V+ + +S GHAR L+
Sbjct: 184 AAAYDQLLKDFKCTHDQLADRIGRSRPQVSNTLRLLRLSPPVQRRVAAGVLSAGHARALL 243
Query: 201 ---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR--EKEKYLTDLEK 255
+ + LA IV++ +SVR EE+V ++ K LTDL
Sbjct: 244 SVDDSEEQDRLAHRIVAEGLSVRAVEEIVTLMGSRPTSSPKSKGPRAGGRLSPALTDLAT 303
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L I L +
Sbjct: 304 RLSDRFETRVKVDLGQKKGKIVVEFASMEDLDRILGSLAPGE 345
>gi|239942679|ref|ZP_04694616.1| hypothetical protein SrosN15_16925 [Streptomyces roseosporus NRRL
15998]
gi|239989138|ref|ZP_04709802.1| hypothetical protein SrosN1_17682 [Streptomyces roseosporus NRRL
11379]
Length = 339
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 89/282 (31%), Positives = 146/282 (51%), Gaps = 5/282 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ D E+ T + I +I PNP PR F+ + L +L SIK G++QP++
Sbjct: 40 ASAPEDRSEQGVGTSGAYFAELPIGAITPNPRQPREVFDEDALAELVVSIKEVGLLQPVV 99
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR + Y++I GERR+RA + A L +P I+R D++ L A++EN+ R LNPLEE
Sbjct: 100 VRKVGPDSYELIMGERRWRACREAGLERIPTIVRATDDEKLLLDALLENLHRAQLNPLEE 159
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+QL+ ++ T + + +G+SR V+N LR+L+L V+ + +S GHAR L+
Sbjct: 160 AAAYDQLLKDFKCTHDQLADRIGRSRPQVSNTLRLLRLSPPVQRRVAAGVLSAGHARALL 219
Query: 201 ---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR--EKEKYLTDLEK 255
+ + LA IV++ +SVR EE+V ++ K LTDL
Sbjct: 220 SVDDSEEQDRLAHRIVAEGLSVRAVEEIVTLMGSRPTSSPKSKGPRAGGRLSPALTDLAT 279
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L I L +
Sbjct: 280 RLSDRFETRVKVDLGQKKGKIVVEFASMEDLDRILGSLAPGE 321
>gi|163742614|ref|ZP_02150000.1| chromosome partitioning protein parB [Phaeobacter gallaeciensis
2.10]
gi|161384199|gb|EDQ08582.1| chromosome partitioning protein parB [Phaeobacter gallaeciensis
2.10]
Length = 279
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 109/280 (38%), Positives = 171/280 (61%), Gaps = 5/280 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +VN S EK+ I ++ + I ++ NP PR F E L+DL SI+ G++Q
Sbjct: 1 MADVNPEPVSTEKQA--IRSTEVMVPIEKVIANPDQPRRQFLQEDLDDLTASIREKGVLQ 58
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PLIVR G Y+I+AGERR+RAA+ A L EVPVIIR+ + +E+AI+EN+QR DLN
Sbjct: 59 PLIVRPRPGGQYEIVAGERRWRAAQGAQLHEVPVIIRDYSDVEMMEVAIIENIQRSDLNA 118
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EEA Y+QL+ ++G+TQ + +GKSRSH+AN++R+L LP V+ ++++ +S GHAR
Sbjct: 119 MEEAQSYKQLMDKFGHTQEKMAEALGKSRSHIANLVRLLHLPDDVQSLVQERRLSAGHAR 178
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQE-QDNKKEKRKKIFEGSREKEKYLTDLEKK 256
L+++ + LA+ IV +SVR TE LV++ + + + + EK+ LE
Sbjct: 179 ALITSDNASDLAKKIVKGGLSVRATEALVKKDAAGLQVATARSAKKTAEKDADTRALEAD 238
Query: 257 ISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
+S+ + + +SI HR G I Y + ++L +C L
Sbjct: 239 LSAALRMKVSIDHRAGGESGVLSISYTSLDELDDLCGRLS 278
>gi|239624148|ref|ZP_04667179.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520534|gb|EEQ60400.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 307
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 177/306 (57%), Gaps = 16/306 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTE--------TIPESQDCISIHSIVPNPHNPRN 56
+K+ LG+GL A+ GE + S+ + + I PN PR
Sbjct: 1 MAKKGLGKGLGAIFGEDVIKESEEDIAKAKAAAADKGEENTSERMVKLALIEPNKEQPRK 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
F E L +L +SIK +G++QPL+V+ Y+IIAGERR+RAAKMA L E+PV++R
Sbjct: 61 DFNEEQLGELAESIKRYGVLQPLLVQKKG-TFYEIIAGERRWRAAKMAGLKEIPVVLREY 119
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ S+EIA++ENVQR+DLNP+EEAL Y+QL+ E+ TQ +I V K+R+ + N +R+L
Sbjct: 120 TKQESMEIALIENVQREDLNPIEEALAYQQLVKEFHLTQEEIAERVAKNRATITNSMRLL 179
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
KL ++EM+ + IS GHAR L+S D L A++I+ MSVR+TE LV++ +
Sbjct: 180 KLDEQIQEMLIQNMISSGHARALLSLDDKGLQLKAAKMILDGGMSVRETERLVKKLAREA 239
Query: 234 EKRKKIFEGSREKEK---YLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKII 289
+ ++ E +LE ++ S +G +SI ++ NKG+ I+Y + +L+ I
Sbjct: 240 NDDGSEKKDKKKDEALAIIYQNLEDRMKSIMGTKVSIHNKDKNKGRIEIEYYSEAELERI 299
Query: 290 CSLLGE 295
++
Sbjct: 300 VEMIES 305
>gi|317509420|ref|ZP_07967038.1| ParB partition protein [Segniliparus rugosus ATCC BAA-974]
gi|316252249|gb|EFV11701.1| ParB partition protein [Segniliparus rugosus ATCC BAA-974]
Length = 322
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 96/310 (30%), Positives = 158/310 (50%), Gaps = 19/310 (6%)
Query: 1 MSNNYSKRRLGRGLAALIG--------------EVNQSIDSPEKKTETIPESQDCISIHS 46
M+ N K LGRGLAALI +V +S E S I +
Sbjct: 1 MA-NQRKGGLGRGLAALIPAGPGSGPRLGDSAADVLIPPNSGSAMEEGQLASYQEIDVEL 59
Query: 47 IVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL 106
I PNP PR+ F+ E L +L SI+ G++QP++VR + G Y+++ GERR RA K A L
Sbjct: 60 IEPNPQQPRHVFDEEALAELTHSIREFGLLQPVVVRPVPGG-YQLVVGERRLRATKAAGL 118
Query: 107 SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSR 166
+ +P I+++ + L A++EN+ R LNPLEEA Y+QL+ ++G T + +G+SR
Sbjct: 119 TSIPAIVKHTADDILLRDALIENIHRAQLNPLEEAAAYQQLLEDFGATHEQLAERLGRSR 178
Query: 167 SHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELV 226
S V+N LR+L+LP V+ + +S GHAR L+ L + + S+ ++ +
Sbjct: 179 SLVSNTLRLLRLPVGVQRKVAAGVLSAGHARALLGLDGNLEAQEDLASRIVAEGMSVRAA 238
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEK---KISSKVGLNISIKHRNNKGQFCIKYETN 283
+E + K R K +LE+ +++ + + + + KG+ I++ +
Sbjct: 239 EEAVTLSSHKSKAKPKGRGKPAPPAELEEVADRLALALDTTVHVGLTSKKGRIVIEFGSV 298
Query: 284 EQLKIICSLL 293
L+ I L+
Sbjct: 299 PDLERIADLI 308
>gi|332830399|gb|EGK03027.1| hypothetical protein HMPREF9455_01277 [Dysgonomonas gadei ATCC
BAA-286]
Length = 302
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 105/307 (34%), Positives = 172/307 (56%), Gaps = 26/307 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ LGRGL ALI + ++ S + I + I NP PR+ F+
Sbjct: 1 MAKKM---VLGRGLDALI--------TIDEVKTEGSSSINEIELSKIQVNPDQPRHVFDE 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SI+ G+IQP+ +R ID+ LY+IIAGERR+RA+ +A LS +P IR ++++
Sbjct: 50 EALQELAASIRQIGVIQPITLRKIDDDLYQIIAGERRYRASSIAGLSSIPAYIRTAEDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ LI Y TQ + +GK R+ +AN LR+LKLP+
Sbjct: 110 VMEMALIENIQREDLNSIEIALAYQNLIEAYDLTQERLSERIGKKRTTIANYLRLLKLPA 169
Query: 181 SVREMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQ---------- 227
++ IR ++I + HARTLV+ D L + ++I+ + +SVR EE V+
Sbjct: 170 EIQMGIRDKKIDMAHARTLVTLEDAAAQLEVYELILEEGLSVRKVEEYVRAIAKGEKLED 229
Query: 228 -EQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQ 285
++ K + K + + L+ +S + + + KG+ I ++T E+
Sbjct: 230 LLKEEKVVETVKKSGVKKATPEEFEILKTHLSKFFSTKVQLTCNDKGKGKISIPFKTEEE 289
Query: 286 LKIICSL 292
L+ I S+
Sbjct: 290 LERIISI 296
>gi|283779779|ref|YP_003370534.1| parB-like partition protein [Pirellula staleyi DSM 6068]
gi|283438232|gb|ADB16674.1| parB-like partition protein [Pirellula staleyi DSM 6068]
Length = 335
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 98/329 (29%), Positives = 171/329 (51%), Gaps = 38/329 (11%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEK---------------------------KTE 33
M+ + RRLGRGLAAL+G + + E + +
Sbjct: 1 MTKD---RRLGRGLAALLGAPLDASPAEEAPATLPLTTNLASLSSDASTAPALSIAREED 57
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
S I + I NP PR F + L +S+K H ++QP++VR + Y++I+
Sbjct: 58 DPKTSLVMIPVGEIEENPFQPRREFSESEISSLAESLKQHDMLQPILVRVVKGR-YQLIS 116
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR RAA A +++P +R D++ E+AIVEN+QRKDLNP+E+AL +++ + E+
Sbjct: 117 GERRLRAATQAGWAKIPARVREADDRLVAELAIVENLQRKDLNPIEKALSFKRYLDEHRC 176
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
TQ D+ + RS +AN++R+L+LP V E +R I+ GHAR L + L +
Sbjct: 177 TQEDLAKRLSIDRSTIANLMRLLELPPVVLEGLRTGTITAGHARALLPLGDERMQMDLCR 236
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIF---EGSREKEKYLTDLEKKISSKVGLNISI 267
I +++SVRD E +VQ+Q + ++ I + +++ + LE+++ +G + I
Sbjct: 237 RIEREELSVRDIERMVQQQLDGEDAPTTIPIGGKKNKKSTGPVQSLEQELRMALGTKVEI 296
Query: 268 KHR-NNKGQFCIKYETNEQLKIICSLLGE 295
K +G+ + + ++E+ + L+ +
Sbjct: 297 KQSTKGRGKILVHFTSHEEFDRLRELITQ 325
>gi|297627566|ref|YP_003689329.1| chromosome partitioning protein [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296923331|emb|CBL57931.1| chromosome partitioning protein [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 327
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 92/278 (33%), Positives = 152/278 (54%), Gaps = 5/278 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + P + + I PNP PR F+ + L++L +SIK G++QP+
Sbjct: 22 QAAEEPREPASDQMADGSYYAELPVAQITPNPKQPRQVFDEDDLQELTESIKEVGLLQPI 81
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR +D Y++I GERR RA + A ++++P I+R D++S L A++EN+ R LNPLE
Sbjct: 82 VVRKLDATHYELIMGERRLRAHQEAGIAQIPAIVRATDDESMLTDALLENLHRVQLNPLE 141
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA YEQL+ ++G TQ+++ + +SR H++N +R+LKLP +V+ + +S GHAR L
Sbjct: 142 EAAAYEQLMGDFGITQDELARRLKRSRPHISNTIRLLKLPVTVQRRVAAAVLSAGHARAL 201
Query: 200 V---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ LAQ IV++ +SVR TEE+V EK K+ +E + L
Sbjct: 202 LALDDPLAQERLAQRIVAEGLSVRATEEIV--ALGGDEKPKQRMARPKEHDPRAEQLATS 259
Query: 257 ISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+S + + + KG+ I + + L+ I +L
Sbjct: 260 LSDRFDTRVKVNMGRKKGRITIDFAGEDDLQRIVEMLK 297
>gi|224025885|ref|ZP_03644251.1| hypothetical protein BACCOPRO_02631 [Bacteroides coprophilus DSM
18228]
gi|224019121|gb|EEF77119.1| hypothetical protein BACCOPRO_02631 [Bacteroides coprophilus DSM
18228]
Length = 298
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 16/302 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL ALI +E I NP+ PR F+
Sbjct: 1 MAV-QKKFALGRGLDALISTEEVKTSGSSSISEIELS--------KISVNPNQPRREFDP 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI GIIQP+ +R I Y+IIAGERR+RA+ A L +P IR D+++
Sbjct: 52 IALQELADSIAEIGIIQPITLRQISEDFYQIIAGERRYRASIQAGLHTIPAYIRTADDEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN LE AL Y+ LI +Y TQ + VGK R+ +AN LR+LKLP+
Sbjct: 112 VMEMALIENIQREDLNSLEIALAYQHLIEQYELTQERLSERVGKKRTTIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIV------SKKMSVRDTEELVQEQDNKKE 234
V+ ++ +EI +GHAR L++ DP + ++ V + + + ++ +
Sbjct: 172 PVQVALKNKEIDMGHARALLALDDPKTQIRIFNEIISQGYSVRKVEEIVKSLSSGESVES 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
KKI + + T L+ + S G + + KG+ I + L+ I +L
Sbjct: 232 GGKKITPKGAKLSEEYTMLQSHLCSFFGAKVQLSCSSKGKGKISIPFNDETDLERIMEIL 291
Query: 294 GE 295
Sbjct: 292 DS 293
>gi|297158783|gb|ADI08495.1| ParB-like protein [Streptomyces bingchenggensis BCW-1]
Length = 321
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 87/284 (30%), Positives = 148/284 (52%), Gaps = 5/284 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ Q P E + + I PNP PR F+ + L +L SI+ G++QP
Sbjct: 22 PQQQQEEVLPPVVEEVAGAHFAELPLDFITPNPRQPREVFDEDALAELVTSIQEVGLLQP 81
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR + Y++I GERR+RA + A L ++P I+R +++ L A++EN+ R LNPL
Sbjct: 82 IVVRQLAPERYELIMGERRWRACREAGLEKIPAIVRATEDEKLLLDALLENLHRAQLNPL 141
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ ++ T +++ +G+SR V+N LR+LKL V+ + +S GHAR
Sbjct: 142 EEAFAYDQLLKDFDCTHDELADRIGRSRPQVSNTLRLLKLSPKVQSRVAAGVLSAGHARA 201
Query: 199 LV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF--EGSREKEKYLTDL 253
L+ + LA IV++ +SVR EE+V ++ R K + LTDL
Sbjct: 202 LLGVDDPEEQDRLAYRIVAEGLSVRSVEEIVTLMGSRSGNRTKAKGPRAGTKISPALTDL 261
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + + L+ I L +
Sbjct: 262 ASRLSDRFETRVKVDLGQKKGKIVVEFASMDDLERILGTLAPGE 305
>gi|49188316|ref|YP_031569.1| stage 0 sporulation protein J [Bacillus anthracis str. Sterne]
gi|65317460|ref|ZP_00390419.1| COG1475: Predicted transcriptional regulators [Bacillus anthracis
str. A2012]
gi|165873012|ref|ZP_02217633.1| stage 0 sporulation protein J [Bacillus anthracis str. A0488]
gi|167641745|ref|ZP_02399988.1| stage 0 sporulation protein J [Bacillus anthracis str. A0193]
gi|170707532|ref|ZP_02897985.1| stage 0 sporulation protein J [Bacillus anthracis str. A0389]
gi|177655283|ref|ZP_02936837.1| stage 0 sporulation protein J [Bacillus anthracis str. A0174]
gi|190569293|ref|ZP_03022187.1| stage 0 sporulation protein J [Bacillus anthracis Tsiankovskii-I]
gi|227818248|ref|YP_002818257.1| stage 0 sporulation protein J [Bacillus anthracis str. CDC 684]
gi|229603108|ref|YP_002869688.1| stage 0 sporulation protein J [Bacillus anthracis str. A0248]
gi|254735154|ref|ZP_05192864.1| stage 0 sporulation protein J [Bacillus anthracis str. Western
North America USA6153]
gi|254755953|ref|ZP_05207985.1| stage 0 sporulation protein J [Bacillus anthracis str. Vollum]
gi|254761367|ref|ZP_05213389.1| stage 0 sporulation protein J [Bacillus anthracis str. Australia
94]
gi|270000518|ref|NP_847874.2| stage 0 sporulation protein J [Bacillus anthracis str. Ames]
gi|49182243|gb|AAT57619.1| stage 0 sporulation protein J [Bacillus anthracis str. Sterne]
gi|164711224|gb|EDR16780.1| stage 0 sporulation protein J [Bacillus anthracis str. A0488]
gi|167510299|gb|EDR85702.1| stage 0 sporulation protein J [Bacillus anthracis str. A0193]
gi|170127528|gb|EDS96402.1| stage 0 sporulation protein J [Bacillus anthracis str. A0389]
gi|172080210|gb|EDT65302.1| stage 0 sporulation protein J [Bacillus anthracis str. A0174]
gi|190559600|gb|EDV13591.1| stage 0 sporulation protein J [Bacillus anthracis Tsiankovskii-I]
gi|227005294|gb|ACP15037.1| stage 0 sporulation protein J [Bacillus anthracis str. CDC 684]
gi|229267516|gb|ACQ49153.1| stage 0 sporulation protein J [Bacillus anthracis str. A0248]
gi|269850229|gb|AAP29360.2| stage 0 sporulation protein J [Bacillus anthracis str. Ames]
Length = 283
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 168/294 (57%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I I + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETVQEIVITELRPNPYQPRKHFNKEAIQELS 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 53 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKCLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVK--K 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I++ E L I LL + +
Sbjct: 230 ERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN 283
>gi|288803282|ref|ZP_06408716.1| spoOJ protein [Prevotella melaninogenica D18]
gi|302345788|ref|YP_003814141.1| ParB-like protein [Prevotella melaninogenica ATCC 25845]
gi|288334323|gb|EFC72764.1| spoOJ protein [Prevotella melaninogenica D18]
gi|302149631|gb|ADK95893.1| ParB-like protein [Prevotella melaninogenica ATCC 25845]
Length = 301
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 104/300 (34%), Positives = 174/300 (58%), Gaps = 14/300 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ N LGRGL ALI S E + + + +++ I NP+ PR F+
Sbjct: 8 NRNAKTNALGRGLDALI--------STEAVSTQGSSTINEVALDQIEANPNQPRREFDPV 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LE+L SI+ G++QP+ +R +D+ ++IIAGERR+RA+++A L VP IR + +++
Sbjct: 60 ALEELANSIRELGLVQPITLRQVDDNRFQIIAGERRWRASQLAGLKAVPAYIRTIKDENV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L+ + G TQ + VGKSR+ +AN LR+LKLP+
Sbjct: 120 MELALVENIQREDLNAIEIALAYEHLLEKSGMTQERVAERVGKSRAAIANYLRLLKLPAL 179
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++K+EI +GHAR L+S P + I+ SVR EEL Q+ +N ++ +
Sbjct: 180 VQMGLQKKEIDMGHARALLSLDSPSLQLKLYREILKNGYSVRKVEELCQQLNNGEDIQSA 239
Query: 239 IFEGSREK--EKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ S + L++++SS + + + + KG+ I + + E+L I ++ +
Sbjct: 240 KKKISARTRLPEEFNILKQRLSSFFDTKVQMSCNADGKGKISIPFASEEELLHIMEVMDK 299
>gi|196041928|ref|ZP_03109215.1| stage 0 sporulation protein J [Bacillus cereus NVH0597-99]
gi|196027183|gb|EDX65803.1| stage 0 sporulation protein J [Bacillus cereus NVH0597-99]
Length = 283
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 168/294 (57%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I I + PNP+ PR +F E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETIQEIMITELRPNPYQPRKHFNKEAIQELS 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 53 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + + K + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVK--K 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I++ E L I LL + +
Sbjct: 230 ERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN 283
>gi|163943159|ref|YP_001648043.1| parB-like partition protein [Bacillus weihenstephanensis KBAB4]
gi|163865356|gb|ABY46415.1| parB-like partition protein [Bacillus weihenstephanensis KBAB4]
Length = 283
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 167/294 (56%), Gaps = 17/294 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRG+ +++ + E+ I + + PNP+ PR YF E +++L
Sbjct: 3 KGLGRGINVFFPDLDVKEE----------ETIQEIIVTELRPNPYQPRKYFNKEAIQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QPLI R Y+I+AGERR+RAAK A L +VP ++R ++ + +E A++
Sbjct: 53 ASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA+ Y+ L++E TQ + +GKSR ++AN R+L LPS V++MI
Sbjct: 112 ENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIA 171
Query: 188 KEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+ H R T+ SL + I + ++VR E++VQE + ++ + +
Sbjct: 172 NGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEQIVQEINQ--RVSRETQQVKK 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
E+ + + E + K G ++ IK + KG+ I + E L I LL + +
Sbjct: 230 ERNIFFVERETFLREKFGTDVKIKETKKEKGKIEIGFFNKEDLNRILELLSKGN 283
>gi|271970548|ref|YP_003344744.1| ParB-like partition protein [Streptosporangium roseum DSM 43021]
gi|270513723|gb|ACZ92001.1| ParB-like partition protein [Streptosporangium roseum DSM 43021]
Length = 324
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 152/312 (48%), Gaps = 23/312 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEV-----------------NQSIDSPEKKTETIPESQDCIS 43
MS GRGLAALI ++ I
Sbjct: 1 MSKQPRGMG-GRGLAALIPGPPVVQSAAPSATATMVAPEPAVQQQPSPQPVAGAYFLEIP 59
Query: 44 IHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKM 103
I I NP PR F+ E L++L SI G++QP++VRA Y++I GERR+RA+K+
Sbjct: 60 IERIERNPRQPRTVFDGEALKELADSITEVGLLQPIVVRATGKDSYELIMGERRWRASKL 119
Query: 104 ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVG 163
A L E+P I+R+ L A++EN+QR+ LNPLEEA Y QL+ ++G T + VG
Sbjct: 120 AGLKEIPAIVRSTQEDKLLLDALIENLQREQLNPLEEAAAYRQLLDDFGATHEQLAVRVG 179
Query: 164 KSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVR 220
+SR+HV N LR+LKLP V+ + I+ GHAR L+ + LA IV++ +SVR
Sbjct: 180 RSRTHVTNTLRLLKLPPRVQLRVSAGTITAGHARALLALDDPAAQERLAARIVAELLSVR 239
Query: 221 DTEELVQEQDNKKEKRKKIFEGSREKE--KYLTDLEKKISSKVGLNISIKHRNNKGQFCI 278
EE+V D + + + L L ++S + + + KG+ +
Sbjct: 240 AVEEIVAMGDAQAAPAPAPKAPRAKPDEEPALRHLADRLSDRFETRVKVDFGRRKGRIVV 299
Query: 279 KYETNEQLKIIC 290
++ T + L+ I
Sbjct: 300 EFATIDDLERII 311
>gi|160941476|ref|ZP_02088811.1| hypothetical protein CLOBOL_06367 [Clostridium bolteae ATCC
BAA-613]
gi|158435622|gb|EDP13389.1| hypothetical protein CLOBOL_06367 [Clostridium bolteae ATCC
BAA-613]
Length = 306
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 182/305 (59%), Gaps = 15/305 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETI--------PESQDCISIHSIVPNPHNPRN 56
+K+ LG+GL A+ GE E + + + I PN PR
Sbjct: 1 MAKKGLGKGLGAIFGEDVIKESEEEIAKAKAAVTDNGDGKSGELMVKMALIEPNREQPRK 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
F E L +L SIK +GI+QPL+V+ Y+IIAGERR+RAAK+A L E+PV++R
Sbjct: 61 DFNEEQLAELADSIKRYGILQPLLVQKKG-TFYEIIAGERRWRAAKIAGLKEIPVVLREY 119
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ + S+EIA++ENVQR DLNP+EEAL Y++L++E+ TQ +I + V K+R+ + N +R+L
Sbjct: 120 NKQESMEIALIENVQRSDLNPIEEALAYQRLVTEFKLTQEEIAARVSKNRATITNSMRLL 179
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
KL ++EM+ + IS GHAR L+S D L A++I+ + +SVR+TE LV+ +
Sbjct: 180 KLDGQIQEMLIQNLISSGHARALLSLEDKGLQLKAAKMILDESLSVRETERLVKRLAKEA 239
Query: 234 EKRKKIFEGSREKEKYL--TDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIIC 290
E ++ + ++++ L LE+++ S +G +SI ++ NKG+ I+Y + +L+ I
Sbjct: 240 ENGEEKKDKNKDEALALIYQSLEERMKSVMGTKVSIHNKDKNKGRIEIEYYSEAELERIV 299
Query: 291 SLLGE 295
++
Sbjct: 300 EMIES 304
>gi|309777478|ref|ZP_07672432.1| stage 0 sporulation protein J [Erysipelotrichaceae bacterium
3_1_53]
gi|308914718|gb|EFP60504.1| stage 0 sporulation protein J [Erysipelotrichaceae bacterium
3_1_53]
Length = 294
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 109/304 (35%), Positives = 176/304 (57%), Gaps = 15/304 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGE--VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M + RLG+GL+A+ GE N D + KTE +S+ + + + PNP+ PR F
Sbjct: 1 MPKKDNSARLGKGLSAIFGEDVSNVLEDIQQGKTEVHEDSKFEVEVKDVKPNPYQPRKNF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ E +++L SI+ HG+ P++V Y++IAGERR RA+K+A L +P I+ D+
Sbjct: 61 DDEKIQELADSIRLHGVFTPILV-KKAVKGYELIAGERRLRASKVAGLKTIPAILMEFDD 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +EIA++EN+QR+DLN +EEA GYE+LI + GYTQ ++ +GKSR HVAN+LR+LKL
Sbjct: 120 QQMMEIALLENIQREDLNAIEEAQGYEKLIKKLGYTQEELAKRIGKSREHVANMLRLLKL 179
Query: 179 PSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P SV++ + +++S+GH R L S +A+ + +SVR E LV+ +
Sbjct: 180 PKSVQQYVIDKQLSMGHVRALLGLKDASQIEEVAKKAIQLHLSVRAVETLVKNMNE---- 235
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
K + ++ L ++ ++ S+ + I + Q I+YE N+ L + LLG
Sbjct: 236 -PKSAPEMKVRDINLDKVQDRLQSRFQTKVRIDEK----QITIRYEGNDDLNRLLELLGG 290
Query: 296 NDFE 299
+ E
Sbjct: 291 IEEE 294
>gi|229826001|ref|ZP_04452070.1| hypothetical protein GCWU000182_01365 [Abiotrophia defectiva ATCC
49176]
gi|229789743|gb|EEP25857.1| hypothetical protein GCWU000182_01365 [Abiotrophia defectiva ATCC
49176]
Length = 291
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 115/298 (38%), Positives = 171/298 (57%), Gaps = 15/298 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LG+GL ++I E + E + + S I I I PN PR F+
Sbjct: 1 MAM---KKGLGKGLDSMIPEKKTKAEMKEAQDK----SLAEIKISEIDPNMGQPRKKFDE 53
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L +L +SIK HG+IQP+I+ Y+IIAGERR+RA+K+A L ++P +IR +K
Sbjct: 54 DELLELAESIKIHGVIQPIILTKRGKR-YEIIAGERRWRASKLAGLVKIPAVIREYTDKE 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E++++EN+QR+DLNP+EEA ++ LI EY Q+D+ V KSRS + N LR+LKL
Sbjct: 113 IMEVSLIENIQRQDLNPIEEATAFKNLIDEYKMKQDDLAERVSKSRSAITNALRLLKLDD 172
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M+ + IS GHAR L+ + LA I +K+SVR+TE+LV E ++
Sbjct: 173 KVKAMLAEGLISTGHARALLAVEDKNKQQILATKIFDEKLSVRETEKLV---KQIPENKE 229
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
E ++ LE + S +G +SIK R N KG+ I Y + E+L I LL
Sbjct: 230 PKKEEKSSEKLIYKKLEDSLKSIIGSKVSIKGRDNGKGKIEIDYYSIEELDRITELLS 287
>gi|163737990|ref|ZP_02145406.1| parB-like partition protein [Phaeobacter gallaeciensis BS107]
gi|161388606|gb|EDQ12959.1| parB-like partition protein [Phaeobacter gallaeciensis BS107]
Length = 279
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 109/280 (38%), Positives = 171/280 (61%), Gaps = 5/280 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +VN S EK+ I ++ + I ++ NP PR F E L+DL SI+ G++Q
Sbjct: 1 MADVNPEPVSTEKQA--IRSTEVMVPIEKVIANPDQPRRQFLQEDLDDLTASIREKGVLQ 58
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PLIVR G Y+I+AGERR+RAA+ A L EVPVIIR+ + +E+AI+EN+QR DLN
Sbjct: 59 PLIVRPRPGGQYEIVAGERRWRAAQGAQLHEVPVIIRDYSDVEMMEVAIIENIQRSDLNA 118
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EEA Y+QL+ ++G+TQ + +GKSRSH+AN++R+L LP V+ ++++ +S GHAR
Sbjct: 119 MEEAQSYKQLMDKFGHTQEKMAEALGKSRSHIANLVRLLHLPDDVQSLVQERRLSAGHAR 178
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQE-QDNKKEKRKKIFEGSREKEKYLTDLEKK 256
L+++ + LA+ IV +SVR TE LV++ + + + + EK+ LE
Sbjct: 179 ALITSDNASDLAKKIVKGGLSVRATEALVKKDAAGLQVATARSAKKTAEKDADTRALEAD 238
Query: 257 ISSKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLLG 294
+S+ + + +SI HR G I Y + ++L +C L
Sbjct: 239 LSAALRMKVSIDHRAGGENGVLSISYTSLDELDDLCGRLS 278
>gi|302880133|ref|YP_003848697.1| parB-like partition protein [Gallionella capsiferriformans ES-2]
gi|302582922|gb|ADL56933.1| parB-like partition protein [Gallionella capsiferriformans ES-2]
Length = 287
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 102/296 (34%), Positives = 170/296 (57%), Gaps = 16/296 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ R LGRGL AL+ D + +S+ + P + PR+ E
Sbjct: 2 MTKTQ--RGLGRGLDALLSGSKSEKD----------DVLRDLSVAMLKPGKYQPRSNMEE 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SIK+ G+IQP++ R + + Y+IIAGERR+RAA++A LS VPV++R V +K+
Sbjct: 50 ASLQELAASIKAQGVIQPILARQLPDESYEIIAGERRWRAAQIAGLSHVPVLVRAVPDKA 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L +A++EN+QR++LNPLEEA+G ++LI E+ T VG+SRS +N+LR+LKLP
Sbjct: 110 ALAMALIENIQRENLNPLEEAIGIQRLIDEFEMTHQTAADAVGRSRSAASNLLRLLKLPL 169
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V+ M+ + + +GHAR L++ +A + K+S + E+ +
Sbjct: 170 PVQAMLMENRLDMGHARALLALDGAQQIA---AANKISQDNLSVREAEKLIYNLQHPAEP 226
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGE 295
+ +RE + + L++ +S ++G N++IK + GQ I Y ++EQL + + L
Sbjct: 227 KKAREISRDVLSLQESLSERIGTNVTIKQKSKGAGQLVIDYVSHEQLDSLIANLQN 282
>gi|225386368|ref|ZP_03756132.1| hypothetical protein CLOSTASPAR_00112 [Clostridium asparagiforme
DSM 15981]
gi|225047550|gb|EEG57796.1| hypothetical protein CLOSTASPAR_00112 [Clostridium asparagiforme
DSM 15981]
Length = 315
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 108/314 (34%), Positives = 171/314 (54%), Gaps = 24/314 (7%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKK-------------------TETIPESQDCISIH 45
+K+ LG+GL A+ GE E E P + + +
Sbjct: 1 MAKKGLGKGLGAIFGEDIIKESENEAVKAAVRRKKAAAAEEGAVETVEENPTGRLMVKVA 60
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMAS 105
I PN PR F E + +L +SIK G++QPL+V+ Y+IIAGERR+RAAKMA
Sbjct: 61 LIEPNKEQPRVDFNEEQMAELAESIKKRGVLQPLLVQKKG-AFYEIIAGERRWRAAKMAG 119
Query: 106 LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKS 165
L EVPV++ + S+EIA++ENVQR DLNP+EE Y+QLI E+G Q +I V K+
Sbjct: 120 LKEVPVVVGEYSRQESMEIALIENVQRADLNPIEEGRAYQQLIQEFGLKQEEIAERVAKN 179
Query: 166 RSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDT 222
R+ V N +R+LKL ++++++ IS GHAR L+ L A++IV +SVR+T
Sbjct: 180 RTTVTNAMRLLKLDEAIQDLVINNMISSGHARALLGLDDKELQLKAAKMIVDGGLSVRET 239
Query: 223 EELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYE 281
E LV+ + + +K + +LE+++ + +G ++I ++ NKG+ I+Y
Sbjct: 240 ERLVKRMAREAGEEEKPKKEENSLNLIYQNLEERMKTIMGTKVTIHNKDKNKGRVEIEYY 299
Query: 282 TNEQLKIICSLLGE 295
+ +L+ I ++
Sbjct: 300 SEAELERIVEMIES 313
>gi|256786605|ref|ZP_05525036.1| partitioning or sporulation protein [Streptomyces lividans TK24]
Length = 288
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 144/262 (54%), Gaps = 5/262 (1%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ + +I PNP PR F+ + L +L SI+ G++QP++VR + G Y++I GERRFRA
Sbjct: 7 EVPLDAITPNPKQPRKDFDDDALAELVTSIREVGLLQPVVVRPTEPGRYELIMGERRFRA 66
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
+ L +P I+R +++ L A++EN+ R LNPLEEA Y+QL+ ++ T + +
Sbjct: 67 CRELELDAIPAIVRATEDEKLLLDALLENLHRAQLNPLEEAFAYDQLLKDFNCTHDQLAD 126
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKM 217
+G+SR V+N LR+LKL V+ + +S GHAR L+ + LA IV++ +
Sbjct: 127 RIGRSRPQVSNTLRLLKLSPKVQNRVAAGVLSAGHARALLSVDDPEEQDRLAHRIVAEGL 186
Query: 218 SVRDTEELVQEQDNKKEKRK--KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQ 275
SVR EE+V ++ +K + K L+DL ++S + + + KG+
Sbjct: 187 SVRSVEEIVTLMGSRPQKPQRAKGPRAGSLVSPALSDLATRLSDRFETRVKVDLGQKKGK 246
Query: 276 FCIKYETNEQLKIICSLLGEND 297
+++ + + L+ I L +
Sbjct: 247 ITVEFASMDDLERILGSLAPGE 268
>gi|54027640|ref|YP_121882.1| putative chromosome partitioning protein [Nocardia farcinica IFM
10152]
gi|54019148|dbj|BAD60518.1| putative chromosome partitioning protein [Nocardia farcinica IFM
10152]
Length = 360
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 102/348 (29%), Positives = 159/348 (45%), Gaps = 59/348 (16%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSID---------------------------------- 26
MS K LGRGLAALI +I
Sbjct: 1 MSQA-KKGGLGRGLAALIPTGPDTIPNGLTTPTAPPGTAKPKGLVTPNGLGTAAANVIIG 59
Query: 27 ----------------SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
E+ T I I PNP PR FE + L +L SI
Sbjct: 60 VDPAGAKPASPLRSDTQAEELTSPSGAVYREIPPDQIEPNPKQPRQVFEEDALAELVHSI 119
Query: 71 KSHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
+ G++QP++VR ++ Y+++ GERR+RA + A L +P I+R + + L A++E
Sbjct: 120 REFGLMQPIVVRRLEPGVDKYQLVMGERRWRACQEAGLEAIPAIVRETADDALLRDALLE 179
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
N+ R LNPLEEA Y+QL+ E+G T ++ + +G+SR V N++R+LKLP V+ +
Sbjct: 180 NIHRVQLNPLEEAAAYQQLLEEFGVTHEELAARIGRSRPVVTNMIRLLKLPIPVQRRVAA 239
Query: 189 EEISLGHARTL----VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+S GHAR L +LA IV++ MSVR TEE V + + + R
Sbjct: 240 GVLSAGHARALLGLEAGPDAQEALAARIVAEGMSVRATEEAVTLANREPDSAATPPAPKR 299
Query: 245 EK--EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
+ L D+ +K+S+ +++ KG+ +++ + E L+ I
Sbjct: 300 KPIHMPGLQDVAEKLSNSFDTRVTVSLGKRKGKIVVEFGSVEDLERIV 347
>gi|21222294|ref|NP_628073.1| partitioning or sporulation protein [Streptomyces coelicolor A3(2)]
gi|4808383|emb|CAB42707.1| putative partitioning or sporulation protein [Streptomyces
coelicolor A3(2)]
Length = 328
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 144/262 (54%), Gaps = 5/262 (1%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ + +I PNP PR F+ + L +L SI+ G++QP++VR + G Y++I GERRFRA
Sbjct: 47 EVPLDAITPNPKQPRKDFDDDALAELVTSIREVGLLQPVVVRPTEPGRYELIMGERRFRA 106
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
+ L +P I+R +++ L A++EN+ R LNPLEEA Y+QL+ ++ T + +
Sbjct: 107 CRELELDAIPAIVRATEDEKLLLDALLENLHRAQLNPLEEAFAYDQLLKDFNCTHDQLAD 166
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKM 217
+G+SR V+N LR+LKL V+ + +S GHAR L+ + LA IV++ +
Sbjct: 167 RIGRSRPQVSNTLRLLKLSPKVQNRVAAGVLSAGHARALLSVDDPEEQDRLAHRIVAEGL 226
Query: 218 SVRDTEELVQEQDNKKEKRK--KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQ 275
SVR EE+V ++ +K + K L+DL ++S + + + KG+
Sbjct: 227 SVRSVEEIVTLMGSRPQKPQRAKGPRAGSLVSPALSDLATRLSDRFETRVKVDLGQKKGK 286
Query: 276 FCIKYETNEQLKIICSLLGEND 297
+++ + + L+ I L +
Sbjct: 287 ITVEFASMDDLERILGSLAPGE 308
>gi|6539744|gb|AAF16004.1|AF187159_4 ParB [Streptomyces coelicolor A3(2)]
Length = 368
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 144/262 (54%), Gaps = 5/262 (1%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ + +I PNP PR F+ + L +L SI+ G++QP++VR + G Y++I GERRFRA
Sbjct: 87 EVPLDAITPNPKQPRKDFDDDALAELVTSIREVGLLQPVVVRPTEPGRYELIMGERRFRA 146
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
+ L +P I+R +++ L A++EN+ R LNPLEEA Y+QL+ ++ T + +
Sbjct: 147 CRELELDAIPAIVRATEDEKLLLDALLENLHRAQLNPLEEAFAYDQLLKDFNCTHDQLAD 206
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKM 217
+G+SR V+N LR+LKL V+ + +S GHAR L+ + LA IV++ +
Sbjct: 207 RIGRSRPQVSNTLRLLKLSPKVQNRVAAGVLSAGHARALLSVDDPEEQDRLAHRIVAEGL 266
Query: 218 SVRDTEELVQEQDNKKEKRK--KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQ 275
SVR EE+V ++ +K + K L+DL ++S + + + KG+
Sbjct: 267 SVRSVEEIVTLMGSRPQKPQRAKGPRAGSLVSPALSDLATRLSDRFETRVKVDLGQKKGK 326
Query: 276 FCIKYETNEQLKIICSLLGEND 297
+++ + + L+ I L +
Sbjct: 327 ITVEFASMDDLERILGSLAPGE 348
>gi|289770497|ref|ZP_06529875.1| ParB [Streptomyces lividans TK24]
gi|289700696|gb|EFD68125.1| ParB [Streptomyces lividans TK24]
Length = 368
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 144/262 (54%), Gaps = 5/262 (1%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ + +I PNP PR F+ + L +L SI+ G++QP++VR + G Y++I GERRFRA
Sbjct: 87 EVPLDAITPNPKQPRKDFDDDALAELVTSIREVGLLQPVVVRPTEPGRYELIMGERRFRA 146
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
+ L +P I+R +++ L A++EN+ R LNPLEEA Y+QL+ ++ T + +
Sbjct: 147 CRELELDAIPAIVRATEDEKLLLDALLENLHRAQLNPLEEAFAYDQLLKDFNCTHDQLAD 206
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKM 217
+G+SR V+N LR+LKL V+ + +S GHAR L+ + LA IV++ +
Sbjct: 207 RIGRSRPQVSNTLRLLKLSPKVQNRVAAGVLSAGHARALLSVDDPEEQDRLAHRIVAEGL 266
Query: 218 SVRDTEELVQEQDNKKEKRK--KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQ 275
SVR EE+V ++ +K + K L+DL ++S + + + KG+
Sbjct: 267 SVRSVEEIVTLMGSRPQKPQRAKGPRAGSLVSPALSDLATRLSDRFETRVKVDLGQKKGK 326
Query: 276 FCIKYETNEQLKIICSLLGEND 297
+++ + + L+ I L +
Sbjct: 327 ITVEFASMDDLERILGSLAPGE 348
>gi|226362886|ref|YP_002780666.1| chromosome partitioning protein ParB [Rhodococcus opacus B4]
gi|226241373|dbj|BAH51721.1| chromosome partitioning protein ParB [Rhodococcus opacus B4]
Length = 359
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 83/279 (29%), Positives = 151/279 (54%), Gaps = 4/279 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G S + + I+ I NP PR F+ + L +L SI+ G++QP
Sbjct: 74 GADGASGNGAQPLPSPTGAVYREIAPDLIERNPKQPRQVFDDDALAELVHSIREFGLMQP 133
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR +++G ++++ GERR+RA++ A L +P I+R + + L A++EN+ R LNPL
Sbjct: 134 IVVRPLEDGKFQLVMGERRWRASQEAELETIPAIVRETGDDAMLRDALLENIHRVQLNPL 193
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ E+ T ++ + +G+SR V N++R+LKLP V+ + +S GHAR
Sbjct: 194 EEAAAYQQLLEEFEVTHEELAAKIGRSRPVVTNMIRLLKLPIPVQRRVAAGVLSAGHARA 253
Query: 199 LVS----TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
L+S +A IV++ MSVR TEE V + ++ + + + L D+
Sbjct: 254 LLSLEAGADAQEVMAARIVAEGMSVRATEEAVTLANRSDDQAQPVQRRKPIQMPGLQDVA 313
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+++S +++ KG+ +++ + + L+ I ++
Sbjct: 314 ERLSDSFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVGMM 352
>gi|2898103|gb|AAC03483.1| SpoOJ-like [Streptomyces coelicolor A3(2)]
Length = 344
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 144/262 (54%), Gaps = 5/262 (1%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ + +I PNP PR F+ + L +L SI+ G++QP++VR + G Y++I GERRFRA
Sbjct: 63 EVPLDAITPNPKQPRKDFDDDALAELVTSIREVGLLQPVVVRPTEPGRYELIMGERRFRA 122
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
+ L +P I+R +++ L A++EN+ R LNPLEEA Y+QL+ ++ T + +
Sbjct: 123 CRELELDAIPAIVRATEDEKLLLDALLENLHRAQLNPLEEAFAYDQLLKDFNCTHDQLAD 182
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKM 217
+G+SR V+N LR+LKL V+ + +S GHAR L+ + LA IV++ +
Sbjct: 183 RIGRSRPQVSNTLRLLKLSPKVQNRVAAGVLSAGHARALLSVDDPEEQDRLAHRIVAEGL 242
Query: 218 SVRDTEELVQEQDNKKEKRK--KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQ 275
SVR EE+V ++ +K + K L+DL ++S + + + KG+
Sbjct: 243 SVRSVEEIVTLMGSRPQKPQRAKGPRAGSLVSPALSDLATRLSDRFETRVKVDLGQKKGK 302
Query: 276 FCIKYETNEQLKIICSLLGEND 297
+++ + + L+ I L +
Sbjct: 303 ITVEFASMDDLERILGSLAPGE 324
>gi|328905775|gb|EGG25551.1| ParB-like protein [Propionibacterium sp. P08]
Length = 307
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 166/309 (53%), Gaps = 17/309 (5%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M+ +S LGRG L + S D + IS+ I P
Sbjct: 2 MATKHS--GLGRGFGELFQRTDLDDDDDQLIDDISADDDTAGKAVGGSTFRLISVDKIQP 59
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N H PR F+ L +L +SI+ G++QP++V ID+G Y+++ GERR+RAA A L+ +
Sbjct: 60 NTHQPRKTFDEHELAELSESIRVVGVLQPVVVTPIDDG-YELVMGERRWRAASKAGLTAI 118
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 119 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSERIQRSRSQI 178
Query: 170 ANILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + + EI+ GHAR + +S A+ +V + +SVR TEELV
Sbjct: 179 ANTIRLLKLSAGVQKRLLEGEITAGHARCLLAIGDPDLQVSTAKWVVDEGLSVRATEELV 238
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
++ + + K ++ L ++S + + I+ RN KG + +E+L
Sbjct: 239 RQTLDDTTEVKPHQRKKPGRDTEAVKLGDQLSEQFHTAVKIRRRNGKGTITFPFNGDEEL 298
Query: 287 KIICSLLGE 295
+ + +L
Sbjct: 299 ERLIDILSN 307
>gi|225075906|ref|ZP_03719105.1| hypothetical protein NEIFLAOT_00930 [Neisseria flavescens
NRL30031/H210]
gi|224952762|gb|EEG33971.1| hypothetical protein NEIFLAOT_00930 [Neisseria flavescens
NRL30031/H210]
Length = 295
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 103/300 (34%), Positives = 170/300 (56%), Gaps = 17/300 (5%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ +K LGRGL +LI S S + ++I I P + R + E
Sbjct: 9 NMAKAKGGLGRGLDSLISNAVDSSSS---------DRLTTVAIADIQPGRYQARVQIDDE 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L SIK+ GIIQP+IVR Y++IAGERR+RA+++A L+E+PV+I+ + ++++
Sbjct: 60 ALQELADSIKAQGIIQPVIVRERGLSQYELIAGERRWRASQLAGLTEIPVVIKTISDETA 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 120 LAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAKAVGKSRSAISNSLRLLSLPEP 179
Query: 182 VREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+EM+ + + +GHAR L++ D L LAQ V SVR+ E ++ +K
Sbjct: 180 VQEMLYQRRLEMGHARALLTLHVVDQLELAQKAVKNGWSVREVERR-----SQLAHQKAK 234
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLGENDF 298
E ++ + + ++ ++G+N +K N KG+ + ++T E + + LG N
Sbjct: 235 PEAAKTISPDIRRINDALTERLGVNAEVKTSNQKKGKIVLHFDTPETFEYLLKQLGINQE 294
>gi|298370415|ref|ZP_06981731.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281875|gb|EFI23364.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
Length = 286
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 95/297 (31%), Positives = 170/297 (57%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +LI ++ + +++ I P + R +
Sbjct: 1 MAKP--KSGLGRGLDSLISNS---------IGDSSSDRLTTVAVKDIQPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RA+++A L+E+PV+++++ +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSQYELIAGERRWRASQLAGLTEIPVVVKSISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAKAVGKSRSAISNTLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++M+ + + +GHAR L++ + L LAQ V SVR+ E ++ ++
Sbjct: 170 PVQDMLYQRRLEMGHARALLTLPVVEQLQLAQKAVKNGWSVREVERR-----SQVAQQAV 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
+ + + L ++ K+G+N+ ++ N KG+ + ++T E + + LG
Sbjct: 225 RKDVKKTISADIRRLNDALTEKLGVNVEVRTTNHKKGKIVLHFDTPETFEYLLKQLG 281
>gi|162451415|ref|YP_001613782.1| chromosome partitioning protein ParB [Sorangium cellulosum 'So ce
56']
gi|161161997|emb|CAN93302.1| chromosome partitioning protein ParB [Sorangium cellulosum 'So ce
56']
Length = 301
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 16/305 (5%)
Query: 1 MSNNYS--KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ + +R LGRGL + P T S +I IVP PR +F
Sbjct: 1 MNADQKGARRALGRGL-----DALLPAAPPATATAAEGRSVFVCAIEKIVPQKGQPRQHF 55
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ LE+L SI+ HG+I+PLIVR N +++IAGERR+RAA+ A L EV V++++V
Sbjct: 56 DETELEELTGSIREHGLIEPLIVRRTQAGNDAFELIAGERRWRAAQRAGLREVLVVVKDV 115
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
K + E+A+VENVQR DLNP+E A +++L+ E+ YT + VGK R+ + N LR+L
Sbjct: 116 SPKEAFELALVENVQRADLNPIEIAEAFDRLLREHSYTHQTLAERVGKDRTTIVNSLRLL 175
Query: 177 KLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
+LP +R M+ E+S GHAR L S +A+ V K+ VR E L++ K+
Sbjct: 176 RLPPRIRTMVISRELSEGHARALLGAPSDKVMADVAERTVHGKLPVRKVEALIKAAKEKE 235
Query: 234 EKRKKIFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
+ + E +K + DLE +++ ++G + ++ G+ I Y + ++L I
Sbjct: 236 LRAAESEEPGEKKRGGKSPAIKDLEARLARRLGTRVEVRDEGGHGELGITYGSLDELDRI 295
Query: 290 CSLLG 294
+LLG
Sbjct: 296 IALLG 300
>gi|297621923|ref|YP_003710060.1| putative chromosome-partitioning protein parB [Waddlia chondrophila
WSU 86-1044]
gi|297377225|gb|ADI39055.1| putative chromosome-partitioning protein parB [Waddlia chondrophila
WSU 86-1044]
Length = 262
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 90/260 (34%), Positives = 145/260 (55%), Gaps = 1/260 (0%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + + I NP+ PR F E LE+L QSI+S G++QP +VR ++NG Y++IAGE
Sbjct: 2 SQEVVEVELSQIRENPYQPRKQFNREELEELAQSIQSVGVLQPPVVRKMENGGYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RRFRAA++A L+ + V++ S E A++EN+QR DLNPL+ A +LI E+G Q
Sbjct: 62 RRFRAAEIAGLTTIHVLVSQKPGNVSAEAALIENIQRVDLNPLDIAQALRRLIVEFGLQQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+++ VGK RS V N LR+L LP ++E ++ EIS+GHA+ ++S S +
Sbjct: 122 DELADKVGKKRSTVTNYLRLLSLPHKIQESLQFGEISMGHAKAILSVSGFEEQLYLHRMV 181
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK-YLTDLEKKISSKVGLNISIKHRNNKG 274
E + K K + + YL+DLE+K+ ++G ++I +G
Sbjct: 182 VEDGLSVRETEEAAAKLNVKPVKKKMRTLNENTVYLSDLEEKLQQRLGTKVTIASSGKRG 241
Query: 275 QFCIKYETNEQLKIICSLLG 294
+ I Y + + L+ I ++
Sbjct: 242 KILIDYYSLDDLERILEVIS 261
>gi|255068062|ref|ZP_05319917.1| sulfite reductase flavoprotein, alpha component [Neisseria sicca
ATCC 29256]
gi|255047660|gb|EET43124.1| sulfite reductase flavoprotein, alpha component [Neisseria sicca
ATCC 29256]
Length = 285
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 100/297 (33%), Positives = 167/297 (56%), Gaps = 20/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +K LGRGL +LI + S + ++I+ I P + R +
Sbjct: 1 MAK--AKGGLGRGLDSLISNGVDNSSS---------DRLTTVAINDIQPGRYQARVQMDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RA+++A L+E+PV+I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSQYELIAGERRWRASQLAGLTEIPVVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAKAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + +GHAR L++ + L LAQ V SVR+ E + +
Sbjct: 170 PVQEMLYHRHLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVER------RSQIAHQT 223
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ ++G+N +K N KG+ + ++T E + + LG
Sbjct: 224 KQEIKKTISPDIRRLNDVLTERLGVNAEVKTTNHKKGKIVLHFDTPETFEYLLKQLG 280
>gi|241758943|ref|ZP_04757055.1| stage 0 sporulation protein J [Neisseria flavescens SK114]
gi|241320764|gb|EER56997.1| stage 0 sporulation protein J [Neisseria flavescens SK114]
Length = 295
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 103/300 (34%), Positives = 170/300 (56%), Gaps = 17/300 (5%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ +K LGRGL +LI S S + ++I I P + R + E
Sbjct: 9 NMAKAKGGLGRGLDSLISNAVDSSSS---------DRLTTVAIADIQPGRYQARVQIDDE 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L SIK+ GIIQP+IVR Y++IAGERR+RA+++A L+E+PV+I+ + ++++
Sbjct: 60 ALQELADSIKAQGIIQPVIVRERGLSQYELIAGERRWRASQLAGLTEIPVVIKTISDETA 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 120 LAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAKAVGKSRSAISNSLRLLSLPEP 179
Query: 182 VREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+EM+ + + +GHAR L++ D L LAQ V SVR+ E ++ +K
Sbjct: 180 VQEMLYQRRLEMGHARALLTLHVVDQLELAQKAVKNGWSVREVERR-----SQLAHQKAK 234
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLGENDF 298
E ++ + + ++ ++G+N +K N KG+ + ++T E + + LG N
Sbjct: 235 PEAAKAISPDIRRINDALTERLGVNAEVKTSNQKKGKIVLHFDTPETFEYLLKQLGINQE 294
>gi|30250394|ref|NP_842464.1| ParB-like nuclease domain-containing protein [Nitrosomonas europaea
ATCC 19718]
gi|30181189|emb|CAD86385.1| ParB-like nuclease domain:ParB-like partition protein [Nitrosomonas
europaea ATCC 19718]
Length = 277
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 103/291 (35%), Positives = 169/291 (58%), Gaps = 19/291 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+ DS + + + + PR + L
Sbjct: 2 VKPKGLGRGLDALLAGNPPETDS-----------LQNLDVGLLQSGKYQPRTRMDEASLH 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
DL +SIK+ GI+QP++VR + G Y+IIAGERR+RAA++A L ++P I+R V ++S+L +
Sbjct: 51 DLAESIKAQGIMQPILVRPLMMGGYEIIAGERRWRAAQIAGLEQIPAIVREVPDESALAL 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+++EN+QR+DLNPLE ALG ++LI E+G T G +G SRS ++N+LR+L L + V++
Sbjct: 111 SLIENIQREDLNPLEAALGIQRLIEEFGMTHQTAGQALGYSRSAISNLLRLLNLAAPVQD 170
Query: 185 MIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+I + EI +GH R ++ L +A +I+ K++SVR+TE L++ + +
Sbjct: 171 LIMQGEIDMGHGRALLVLDAGKQLEVAHLIIQKQLSVRETENLLKRMNEM-----PSVKK 225
Query: 243 SREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
++ L L++ IS+++G N+ IK + G I Y + EQL I +
Sbjct: 226 RSFPDRDLLRLQEDISARLGANVIIKPGKKGTGNVVIHYASLEQLDGILAK 276
>gi|326778140|ref|ZP_08237405.1| parB-like partition protein [Streptomyces cf. griseus XylebKG-1]
gi|326658473|gb|EGE43319.1| parB-like partition protein [Streptomyces cf. griseus XylebKG-1]
Length = 340
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 88/282 (31%), Positives = 145/282 (51%), Gaps = 5/282 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ E++ T + I +I PNP PR F+ + L +L SIK G++QP++
Sbjct: 41 ASTPEGRSEQEAGTSGAYFAELPIGTITPNPRQPREVFDEDALAELVVSIKEVGLLQPVV 100
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR + Y++I GERR+RA + A L +P I+R D++ L A++EN+ R LNPLEE
Sbjct: 101 VRKVGPDSYELIMGERRWRACREAGLERIPTIVRATDDEKLLLDALLENLHRAQLNPLEE 160
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+QL+ ++ T + + +G+SR V N LR+L+L V+ + +S GHAR L+
Sbjct: 161 AAAYDQLLKDFKCTHDQLADRIGRSRPQVTNTLRLLRLSPPVQRRVAAGVLSAGHARALL 220
Query: 201 ---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR--EKEKYLTDLEK 255
+ + LA IV++ +SVR EE+V ++ K LTDL
Sbjct: 221 SVDDSEEQDRLAHRIVAEGLSVRAVEEIVTLMGSRPTSAAKPKGPRAGGRLSPALTDLAT 280
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L I L +
Sbjct: 281 RLSDRFETRVKVDLGQKKGKIVVEFASMEDLDRILGSLAPGE 322
>gi|182437485|ref|YP_001825204.1| putative ParB homologue [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178466001|dbj|BAG20521.1| putative ParB homologue [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 364
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 88/282 (31%), Positives = 145/282 (51%), Gaps = 5/282 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ E++ T + I +I PNP PR F+ + L +L SIK G++QP++
Sbjct: 65 ASTPEGRSEQEAGTSGAYFAELPIGTITPNPRQPREVFDEDALAELVVSIKEVGLLQPVV 124
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR + Y++I GERR+RA + A L +P I+R D++ L A++EN+ R LNPLEE
Sbjct: 125 VRKVGPDSYELIMGERRWRACREAGLERIPTIVRATDDEKLLLDALLENLHRAQLNPLEE 184
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+QL+ ++ T + + +G+SR V N LR+L+L V+ + +S GHAR L+
Sbjct: 185 AAAYDQLLKDFKCTHDQLADRIGRSRPQVTNTLRLLRLSPPVQRRVAAGVLSAGHARALL 244
Query: 201 ---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR--EKEKYLTDLEK 255
+ + LA IV++ +SVR EE+V ++ K LTDL
Sbjct: 245 SVDDSEEQDRLAHRIVAEGLSVRAVEEIVTLMGSRPTSAAKPKGPRAGGRLSPALTDLAT 304
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L I L +
Sbjct: 305 RLSDRFETRVKVDLGQKKGKIVVEFASMEDLDRILGSLAPGE 346
>gi|160871880|ref|ZP_02062012.1| chromosome partitioning protein ParB [Rickettsiella grylli]
gi|159120679|gb|EDP46017.1| chromosome partitioning protein ParB [Rickettsiella grylli]
Length = 288
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 106/293 (36%), Positives = 173/293 (59%), Gaps = 8/293 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K RLGR L L+ D + E + I + + PR F + LE
Sbjct: 1 MKKSRLGRNLDMLLSG-QPFEDLVQTTQTLKKEELCHLPIEYMQAGRYQPRREFTQDALE 59
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
DL SI+ GII P++VR I+ Y+IIAGERR+RAA++A L+EVPV+++++ ++++L +
Sbjct: 60 DLAHSIRMQGIINPIVVRLIEKNRYEIIAGERRWRAAQLAHLNEVPVLVKDISDETALAL 119
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+++EN+QR+DLNPLEEA G ++LI E+ T +IG+ +G+SRS + N+LR+L L V+
Sbjct: 120 SLIENIQRQDLNPLEEAEGIQRLIHEFKLTHQEIGTTLGRSRSTITNLLRLLHLAPPVKR 179
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++++ ++ +GHAR L +S+ + A+ IV K+SVR+ E VQ+ + K + F G
Sbjct: 180 LLQQGQLEMGHARALLSLSSPLQIQAAEKIVKNKLSVREAERFVQKLELTSTKTIQPFHG 239
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ + LE+K+S +G + K KGQ I Y + ++L I + L
Sbjct: 240 ----DADVQQLERKLSELLGTKVYFKQTEKGKGQLIIHYNSLDELDGILTHLN 288
>gi|157273514|gb|ABV27413.1| stage 0 sporulation protein J [Candidatus Chloracidobacterium
thermophilum]
Length = 288
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 107/292 (36%), Positives = 166/292 (56%), Gaps = 17/292 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++R LGRGL+AL+ E +T E+ + I I+PN PR F E LE
Sbjct: 2 TTRRALGRGLSALLPE----------RTPQAGETLLELDIERIIPNLDQPRTAFPEEKLE 51
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSI+ HGI+QP++VR +++I+AGERR+RAA+ A L +PV+IR V ++ LE+
Sbjct: 52 ELAQSIREHGILQPIVVRRHG-EMFQIVAGERRWRAAQRAGLHRIPVVIREVPDEQLLEL 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DL P+EEA Y +L+ E G TQ I +GK R+ VAN +R+L+LPS +++
Sbjct: 111 ALVENLQREDLTPIEEAQAYRRLMDELGLTQEQIAVRLGKDRTTVANAIRLLRLPSDIQK 170
Query: 185 MIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ + +S GHAR L+ +AQ ++ + +SVR+TE LV+ +
Sbjct: 171 LVEDQLLSPGHARALLALDREELQRRVAQSVIERGLSVRETERLVRRTLRGEPVLVGNTS 230
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + + E K+S +G + I R G I Y E L + + L
Sbjct: 231 SA---DPNVKFAESKLSKLLGTKVRIVGRGGGGYIEIAYYNAEDLDRLYNQL 279
>gi|325853113|ref|ZP_08171262.1| putative stage 0 sporulation protein J [Prevotella denticola CRIS
18C-A]
gi|327313983|ref|YP_004329420.1| putative stage 0 sporulation protein J [Prevotella denticola F0289]
gi|325484487|gb|EGC87408.1| putative stage 0 sporulation protein J [Prevotella denticola CRIS
18C-A]
gi|326944233|gb|AEA20118.1| putative stage 0 sporulation protein J [Prevotella denticola F0289]
Length = 301
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 173/300 (57%), Gaps = 14/300 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ N LGRGL ALI S E + + + +++ I NP+ PR F+
Sbjct: 8 NRNAKTNALGRGLDALI--------STESVSTQGSSTINEVALDQIEANPNQPRREFDPV 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LE+L SI+ G++QP+ +R D ++IIAGERR+RA+++A L+ +P IR + ++S
Sbjct: 60 ALEELANSIRELGLVQPITLRQTDENRFQIIAGERRWRASQLAGLTAIPAYIRTIKDESV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L+ + G TQ + VGKSR+ +AN LR+LKLP+
Sbjct: 120 MELALVENIQREDLNAIEIALAYEHLLEKSGMTQERVAERVGKSRAAIANYLRLLKLPAQ 179
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++K+EI +GHAR L+S P + I+ SVR EEL Q+ ++ ++ +
Sbjct: 180 VQMGLQKKEIDMGHARALLSLDSPSLQLKLYREILKNGYSVRKVEELCQQLNSGEDIQSA 239
Query: 239 IFEGSREK--EKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + + L++++S+ + + + KG+ I +++ E+L I ++ +
Sbjct: 240 KKKIAARTRLPEEFNLLKQRLSAFFDTKVQMSCNTRGKGKISIPFDSEEELLHIMEVMDK 299
>gi|282859205|ref|ZP_06268327.1| ParB-like protein [Prevotella bivia JCVIHMP010]
gi|282588024|gb|EFB93207.1| ParB-like protein [Prevotella bivia JCVIHMP010]
Length = 303
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 105/304 (34%), Positives = 171/304 (56%), Gaps = 17/304 (5%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ N LGRGL ALI S E + + + ++I I NP+ PR F+
Sbjct: 8 NRNGKTNALGRGLDALI--------STESVSTQGSSTINEVAIDQIEANPNQPRREFDPI 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L SIK G++QP+ +R I ++IIAGERR+RA+++A L+ +P IR + +++
Sbjct: 60 ALQELANSIKELGLVQPITLRQIAEEKFQIIAGERRWRASQIAGLTAIPAYIRTIKDENV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L+ + G TQ + VGKSR+ +AN LR+LKLP+
Sbjct: 120 MELALVENIQREDLNAIEIALAYEHLLEKSGMTQERVSERVGKSRAAIANYLRLLKLPAQ 179
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKK--EKR 236
V+ ++K+EI +GHAR L+S P + I SVR EEL Q+ N + +
Sbjct: 180 VQMSLQKKEIDMGHARALLSIDSPSLQLKLFREIQKNGYSVRKVEELCQQLKNGEDLQTA 239
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKII---CSL 292
KK + L++++SS + + + N KG+ I + + E+L+ +
Sbjct: 240 KKQIAKKSRLPEEFNILKQRLSSFFDAKVQMSYNANGKGKISIPFASEEELEHLMAVMDK 299
Query: 293 LGEN 296
+ ++
Sbjct: 300 IKKD 303
>gi|329769237|ref|ZP_08260656.1| hypothetical protein HMPREF0433_00420 [Gemella sanguinis M325]
gi|328839368|gb|EGF88948.1| hypothetical protein HMPREF0433_00420 [Gemella sanguinis M325]
Length = 285
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 92/296 (31%), Positives = 163/296 (55%), Gaps = 12/296 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL A+ N + + K IS+ I NP+ PR F
Sbjct: 1 MAKKSGK-GLGRGLDAIFATENVELVTDNDK-------VLEISLEEIKKNPYQPRTIFNE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L +SI+ +G++QP++V Y IIAGERRFRA ++ +P I++ + ++
Sbjct: 53 EKLDELKESIEKNGLLQPIVV-KKAVKGYYIIAGERRFRAFELLGKETIPAIVKEMTDEE 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +++EN+QR+DL+ LEE+ Y+ L+ + TQ ++ +GKSR ++AN LR+LKLP+
Sbjct: 112 MMVFSVLENLQREDLSALEESESYKNLMDKMELTQEELAKKLGKSRPYIANSLRLLKLPT 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
++ + E+S HARTL++ A + V K+ R E+ K + K
Sbjct: 172 EIKNKLLSGELSAAHARTLLALKT--KKAMLEVCDKVIERKMSVRELEEYVAKLLKPKEV 229
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ K+ ++ + E + ++G ++IK RN KG+ I+++ N++ + I L +
Sbjct: 230 KKAKPKDIFIEEQENILKKRLGTVVTIKQGRNKKGKIEIEFKDNDEFERILELFKD 285
>gi|261856908|ref|YP_003264191.1| parB-like partition protein [Halothiobacillus neapolitanus c2]
gi|261837377|gb|ACX97144.1| parB-like partition protein [Halothiobacillus neapolitanus c2]
Length = 286
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 88/292 (30%), Positives = 161/292 (55%), Gaps = 16/292 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K+ LGRGL AL+ + + +++ I P+P PR +F+ + L
Sbjct: 3 VKKKGLGRGLDALL--------RSSEAKDDPGAQLRDVALELIHPSPFQPRTHFDEDALR 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L SI++ G+IQP+++R Y++IAGERR+RAA++A L ++P I+R++D+ + +
Sbjct: 55 SLADSIRAQGLIQPVVLRRRSGE-YELIAGERRWRAAQLAGLQQIPAIVRDIDDHQAAAL 113
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DL+P+E+A +LI E+ T + I+G SR V+N LR+L L VR+
Sbjct: 114 ALIENLQREDLDPIEQAEAMRRLIKEFEMTHQRVADILGISRPVVSNALRLLDLAEPVRQ 173
Query: 185 MIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+++ +++ GHAR L + LA+ IV+K ++VR E +V++ +
Sbjct: 174 LLQNKQLDAGHARALAGLPMAQQPLLAEKIVAKALTVRQVEGMVRKLNESAL----SPTA 229
Query: 243 SREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + L ++IS +G+ + + + G+ ++++ QL I L
Sbjct: 230 PQPADPDTALLLRQISDALGVQVDLVLNTRGGGRLKLRFDQPGQLSRILDRL 281
>gi|241888720|ref|ZP_04776027.1| stage 0 sporulation protein J [Gemella haemolysans ATCC 10379]
gi|241864743|gb|EER69118.1| stage 0 sporulation protein J [Gemella haemolysans ATCC 10379]
Length = 286
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 164/296 (55%), Gaps = 12/296 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL A+ N I + K I++ I NP+ PR YF
Sbjct: 1 MAKKLGK-GLGRGLDAIFATENVEIVTDNDK-------IVEIALEEIKKNPYQPRTYFNE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L +SI+ +G++QP+IV Y IIAGERR+RA ++ E+P II+ + ++
Sbjct: 53 EKLNELKESIEKNGLLQPIIV-KKAVKGYYIIAGERRYRAFELLGRKEIPAIIKEMTDEE 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ A++EN+QR+DL+ LEE+ Y+ L+ + TQ ++ +GKSR ++AN LR+LKLP+
Sbjct: 112 MMVFAVLENLQREDLSALEESESYKNLMDKMSLTQEELAKKLGKSRPYIANSLRLLKLPT 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
++ + + IS HARTL+S A V + R E+ K + K
Sbjct: 172 EIKNKLEQGVISAAHARTLLSLKT--KKAMEEVCALVVERKMSVRELEEYVAKLLKPKEV 229
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ K+ ++ + E + ++G +++IK RN KG+ I+++ N++ + I SL +
Sbjct: 230 KKAKAKDIFIEEQEDILKKRLGTSVTIKQGRNKKGKIEIEFKDNDEFERIISLFKD 285
>gi|189426225|ref|YP_001953402.1| parB-like partition protein [Geobacter lovleyi SZ]
gi|189422484|gb|ACD96882.1| parB-like partition protein [Geobacter lovleyi SZ]
Length = 282
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 161/291 (55%), Gaps = 12/291 (4%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+G+AAL+ ++ + D + I I PN + PR F + LE+
Sbjct: 3 KKGGLGKGMAALLPVMSVAEDK----------NYFLCPIEQIRPNRNQPRKQFAQDKLEE 52
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SI+ GIIQPL+V D G Y+IIAGERR+RA++ A L E+PV+IR + +E+A
Sbjct: 53 LASSIREKGIIQPLVVTKKD-GYYEIIAGERRWRASQKAGLRELPVVIREASEDAVMELA 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLN +EEA Y+ L+ +G +Q+++ VGK+R+ V N LR+L+LP ++
Sbjct: 112 LIENIQREDLNAIEEAQAYKSLVEHFGISQDEVAKRVGKNRTTVTNALRLLRLPDDIQRD 171
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ +E +S+GHAR L+ + + + + + + K + + +R+
Sbjct: 172 VVEERLSMGHARALLGLENEELVQKARHEILHRMLSVRATEELVNKLKRGSHAVQKPARQ 231
Query: 246 KEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + LE+++ + I+I ++ KG I + ++++L I LL
Sbjct: 232 PDLLMVSLEEQLQKQFQTRIAIRRNSGGKGALEIHFSSSDELTRIIDLLQS 282
>gi|261364187|ref|ZP_05977070.1| sulfite reductase flavoprotein, alpha component [Neisseria mucosa
ATCC 25996]
gi|288567794|gb|EFC89354.1| sulfite reductase flavoprotein, alpha component [Neisseria mucosa
ATCC 25996]
Length = 285
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 167/297 (56%), Gaps = 20/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +K LGRGL +LI + S + ++I+ I P + R +
Sbjct: 1 MAK--AKGGLGRGLDSLISNGVDNSSS---------DRLTTVAINDIQPGRYQARVQMDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RA+++A L+E+PV+I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSQYELIAGERRWRASQLAGLTEIPVVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAKAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++M+ + +GHAR L++ + L LAQ V SVR+ E + +
Sbjct: 170 PVQDMLYHRHLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVER------RSQVAHQA 223
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ ++G+N +K N KG+ + ++T E + + LG
Sbjct: 224 KQEIKKNISPDIRRLNDVLTERLGVNAEVKTTNNKKGKIVLHFDTPETFEYLLKQLG 280
>gi|325270372|ref|ZP_08136977.1| chromosome partitioning protein SpoOJ [Prevotella multiformis DSM
16608]
gi|324987316|gb|EGC19294.1| chromosome partitioning protein SpoOJ [Prevotella multiformis DSM
16608]
Length = 301
Score = 139 bits (348), Expect = 6e-31, Method: Composition-based stats.
Identities = 103/300 (34%), Positives = 175/300 (58%), Gaps = 14/300 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ N LGRGL ALI S E + + + +++ I NP+ PR F+
Sbjct: 8 NRNAKTNALGRGLDALI--------STESVSTQGSSTINEVALDQIEANPNQPRREFDPV 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
LE+L SI+ G++QP+ +R D ++IIAGERR+RA+++A L+ +P IR + ++S
Sbjct: 60 ALEELANSIRELGLVQPITLRQTDENRFQIIAGERRWRASQLAGLTAIPAYIRTIKDESV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L+ + G TQ + VGKSR+ +AN LR+LKLP+
Sbjct: 120 MELALVENIQREDLNAIEIALAYEHLLEKSGMTQERVAERVGKSRAAIANYLRLLKLPAQ 179
Query: 182 VREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++K+EI +GHAR +L S S L L + I+ SVR EEL Q+ ++ ++ +
Sbjct: 180 VQMGLQKKEIDMGHARALLSLSSPSLQLKLYREILKNGYSVRRVEELCQQLNSGEDIQTA 239
Query: 239 IFEGSREK--EKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + + L++++S+ + + + + KG+ I + + E+L I ++ +
Sbjct: 240 KKKIAARTRLPEEFNLLKQRLSAFFDTKVQMSCNASGKGKISIPFASEEELLHIMEVMDK 299
>gi|225570314|ref|ZP_03779339.1| hypothetical protein CLOHYLEM_06411 [Clostridium hylemonae DSM
15053]
gi|225160846|gb|EEG73465.1| hypothetical protein CLOHYLEM_06411 [Clostridium hylemonae DSM
15053]
Length = 306
Score = 139 bits (348), Expect = 6e-31, Method: Composition-based stats.
Identities = 107/303 (35%), Positives = 178/303 (58%), Gaps = 14/303 (4%)
Query: 1 MSNNY--SKRRLGRGLAALIGEVNQSIDSPEK----KTETIPESQDCISIHSIVPNPHNP 54
M +N K+ LG+GL +LI + + + + + I+ + PN P
Sbjct: 1 MEDNMAVKKKGLGKGLDSLIPDKPLKTTTTNTSTPLEDNKSDTGERTMKINMVEPNREQP 60
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R FE + L +L SIK G++QPL+VR ++IIAGERR+RAAKMA + EVPVI++
Sbjct: 61 RKNFEEDALLELADSIKQFGVLQPLLVRKRK-DYFEIIAGERRWRAAKMAGIKEVPVIVK 119
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+ + +EI+++EN+QR++LNP+EEA+ +++L+ E+ Q+++ V KSR+ V N +R
Sbjct: 120 DYTEQEIVEISLIENIQRENLNPIEEAMAFKKLLEEFNLKQDEVAERVSKSRTAVTNSMR 179
Query: 175 ILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
+LKL V++MI + IS GHAR L+ LA I +K+SVR+TE+L++E N
Sbjct: 180 LLKLDEKVQQMIIDDMISTGHARALLAIDDHEQQYILANKIFDEKLSVRETEKLIKELKN 239
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIIC 290
K+ ++K ++ TDL +K+ +G +SI KG+ I+Y ++ +L+ +
Sbjct: 240 PKKPKEKKIIENQFV---YTDLAEKLKEVMGTKVSIASKGKGKGKIEIEYYSDSELERVF 296
Query: 291 SLL 293
L+
Sbjct: 297 DLM 299
>gi|163842269|ref|YP_001626674.1| chromosome partitioning protein [Renibacterium salmoninarum ATCC
33209]
gi|162955745|gb|ABY25260.1| chromosome partitioning protein [Renibacterium salmoninarum ATCC
33209]
Length = 338
Score = 139 bits (348), Expect = 6e-31, Method: Composition-based stats.
Identities = 98/336 (29%), Positives = 163/336 (48%), Gaps = 41/336 (12%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKT---------------------------- 32
M+ +R LGRGL ALI + + +T
Sbjct: 1 MTEKQ-RRGLGRGLGALIPSAPDEDGATDGQTTLRPVDLFFPESKEKKSSRTRIVSRETS 59
Query: 33 ------ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
E I + I PN PR+ F+ + + +L SI+ GI+QP++VR +
Sbjct: 60 PSPELVEVPGARFAQIKLDEIQPNRKQPRSVFDEDDMAELVHSIREIGILQPIVVRKSPD 119
Query: 87 G---LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
Y+++ GERR+RA+++A +P I+R + L A++EN+ R LNPLEEA
Sbjct: 120 KGGAPYELVMGERRWRASQIAETGTIPAIVRETSDDDLLRDALLENLHRSQLNPLEEAAA 179
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLV 200
Y+QL+ ++G T ++ +G+SR V+N LR+LKLP +V+ + +S GHAR +L
Sbjct: 180 YQQLLEDFGTTHEELADRIGRSRPQVSNTLRLLKLPPTVQRRVAAGVLSAGHARALLSLP 239
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
++ LAQ IV++ MSVR TEE V R+ + + + L L ++ +
Sbjct: 240 DSAAIERLAQRIVAEGMSVRATEEAVALYQEPAAGRQGANDRPNARHERLDFLASSLADR 299
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ I KG+ I++ + E L I ++L +
Sbjct: 300 LDTSVKITLGARKGKVSIEFASVEDLNRIMTVLDPD 335
>gi|284799453|ref|ZP_05984026.2| sulfite reductase flavoprotein, alpha component [Neisseria subflava
NJ9703]
gi|284797908|gb|EFC53255.1| sulfite reductase flavoprotein, alpha component [Neisseria subflava
NJ9703]
Length = 295
Score = 139 bits (348), Expect = 6e-31, Method: Composition-based stats.
Identities = 103/298 (34%), Positives = 169/298 (56%), Gaps = 17/298 (5%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ +K LGRGL +LI S S + ++I I P + R + E
Sbjct: 9 NMAKAKGGLGRGLDSLISNAVDSSSS---------DRLTTVAIADIQPGRYQARVQIDDE 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L SIK+ GIIQP+IVR Y++IAGERR+RA+++A L+E+PV+I+ + ++++
Sbjct: 60 ALQELADSIKAQGIIQPVIVRERGLSQYELIAGERRWRASQLAGLTEIPVVIKTISDETA 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 120 LAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAKAVGKSRSAISNSLRLLSLPEP 179
Query: 182 VREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V+EM+ + + +GHAR L++ D L LAQ V SVR+ E ++ +K
Sbjct: 180 VQEMLYQRRLEMGHARALLTLHVVDQLELAQKAVKNGWSVREVERR-----SQLAHQKAK 234
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLGEN 296
E ++ + + ++ +G+N +K N KG+ + ++T E + + LG N
Sbjct: 235 PEATKTINPDIRRINDALTEHLGVNAEVKTSNQKKGKIVLHFDTPETFEYLLKQLGIN 292
>gi|86160769|ref|YP_467554.1| chromosome segregation DNA-binding protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85777280|gb|ABC84117.1| chromosome segregation DNA-binding protein [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 298
Score = 139 bits (348), Expect = 6e-31, Method: Composition-based stats.
Identities = 109/300 (36%), Positives = 167/300 (55%), Gaps = 9/300 (3%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVNQSIDSPEKKTETIPE-SQDCISIHSIVPNPHNPRNYF 58
MS +R LGRG+AAL+ + +P + + + +I NP PR F
Sbjct: 1 MSIAEKRRPALGRGMAALLSNAPPPPSAVAAPAPAVPGRTLLTLPVEAIERNPEQPRKRF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E LE+L SI+ HGI++P++VR D Y+I+AGERR+RAA+ A L EVP ++R +
Sbjct: 61 EDAKLEELAASIRQHGIVEPILVRK-DGARYRILAGERRWRAAQRAGLKEVPAVLREATD 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ + E+A+VEN+QR DLN +EEA YE L S++G TQ I + VGK RS VAN LR+LKL
Sbjct: 120 REAFELALVENLQRADLNAIEEAEAYEVLQSDHGLTQEAIATRVGKERSTVANALRLLKL 179
Query: 179 PSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P VRE +R ++ +GHAR L+ +AQ + + +SVR TE LV+ K K
Sbjct: 180 PEDVRESVRGGQLDMGHARALLGLEDAEAIRKIAQRAIREGLSVRATEALVRSLSKKPSK 239
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICSLLG 294
+ DL ++ ++G + ++ G+ ++Y + ++L I + +G
Sbjct: 240 AGP--ADPPADSPAIRDLAHRLQRRLGARCRVVPKSAVAGKLEVEYTSLDELDGILAKIG 297
>gi|313901351|ref|ZP_07834837.1| stage 0 sporulation protein J [Clostridium sp. HGF2]
gi|312953839|gb|EFR35521.1| stage 0 sporulation protein J [Clostridium sp. HGF2]
Length = 294
Score = 139 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 177/304 (58%), Gaps = 15/304 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEV--NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M + RLG+GL+A+ GE N D + KTE +S+ + + + PNP+ PR F
Sbjct: 1 MPKKENSARLGKGLSAIFGEDVGNVLEDIQQGKTEVHEDSKFEVEVKDVKPNPYQPRKNF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ + +++L SIK HG+ P++V Y++IAGERR RA+K+A L +P I+ D+
Sbjct: 61 DDDKIQELADSIKLHGVFTPILV-KKAVKGYELIAGERRLRASKVAGLKTIPAILMEFDD 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +EIA++EN+QR+DLN +EEA GYE+LI + GYTQ ++ +GKSR HVAN+LR+LKL
Sbjct: 120 QQMMEIALLENIQREDLNAIEEAQGYEKLIKKLGYTQEELAKRIGKSREHVANMLRLLKL 179
Query: 179 PSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P SV++ + +++S+GH R L S +A+ + +SVR E LV+ +
Sbjct: 180 PKSVQQYVIDKQLSMGHVRALLGLKDASQIEDVAKKAIQLHLSVRAVETLVKNMNE---- 235
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
K ++++ L ++ ++ S+ + I + Q I+Y+ NE L + +LG
Sbjct: 236 -PKSAPEKKQRDINLDKVQDRLQSRFQTRVRIDEK----QITIRYDGNEDLNRLLEMLGG 290
Query: 296 NDFE 299
+ E
Sbjct: 291 IEEE 294
>gi|242277485|ref|YP_002989614.1| parB-like partition protein [Desulfovibrio salexigens DSM 2638]
gi|242120379|gb|ACS78075.1| parB-like partition protein [Desulfovibrio salexigens DSM 2638]
Length = 308
Score = 139 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 96/301 (31%), Positives = 163/301 (54%), Gaps = 19/301 (6%)
Query: 9 RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQ 68
LGRGL AL+G E+ + + I I IV NP+ PR F E L+DL +
Sbjct: 7 GLGRGLDALLGGGKGV---AEESSSDLSIDARKIDIDMIVANPNQPRKEFSPEALKDLSE 63
Query: 69 SIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SI++ G++QP++VR + ++++AGERR RA+K+A L E+P +++ + + S+ IA+
Sbjct: 64 SIRAKGVLQPILVRPVAGRKDRFELVAGERRLRASKLAGLGEIPALVKEMTDLESMAIAL 123
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLNP+EEA GY++LI+++G +Q + VGKSRS ++N +R+L L V+ I
Sbjct: 124 IENLQREDLNPIEEAKGYQELITKFGLSQEQLSGQVGKSRSALSNSMRLLTLSEPVQNAI 183
Query: 187 RKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNK----------- 232
+IS GH R L+ L + ++S MSVR E
Sbjct: 184 GDGKISAGHGRALMAIGDDDARDELFERLMSSGMSVRQCEGAATYFKEHGELPEGEVVAK 243
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
+ +K ++ ++ L ++ ++ S + + KG+ I Y E+L+ + ++
Sbjct: 244 PKSKKSKNTEPKKVDENLERIKGRLESALETKVRFSGSPKKGKMTISYANEEELERLVAI 303
Query: 293 L 293
L
Sbjct: 304 L 304
>gi|168699738|ref|ZP_02732015.1| probable chromosome partitioning protein parB [Gemmata
obscuriglobus UQM 2246]
Length = 296
Score = 139 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 95/304 (31%), Positives = 161/304 (52%), Gaps = 20/304 (6%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ + RL RGL AL+G+++ + + I NP+ PR F+ E
Sbjct: 3 ATVKAPPRLARGLNALLGDISAPSSDAP---------VAKLPLGKIAFNPYQPRKQFDDE 53
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L L SIK+HG++QPL+VRA Y++IAGERR RAA+ A L+EVPV + + +++
Sbjct: 54 ELASLAASIKTHGVLQPLVVRAAGEE-YQLIAGERRLRAARSAGLAEVPVHVVHFEDQQV 112
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
E A+VEN+QR DLNPLE+A G+++ + ++ TQ+ + +G R+ V N+L +L L
Sbjct: 113 FEAALVENIQRTDLNPLEKAQGFKEYMDKFKMTQDQLAGRLGLDRTTVTNLLGLLNLHPD 172
Query: 182 VREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD------NK 232
V+ +R ++++GHA+ + L+ A+ + K SV E LV++
Sbjct: 173 VQAAVRNGQLTMGHAKVLKGVTDLEQQLAFAKDAIMKNYSVHALELLVKQHKLAAAGTEL 232
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICS 291
+ EK ++ LE + ++ + I IK + +KGQ I +++N+ + I
Sbjct: 233 AAAAPAEKKEPAEKTAHVKGLEDDLRQRLAVKIEIKVKAKDKGQIVIGFDSNDDFERIIQ 292
Query: 292 LLGE 295
L +
Sbjct: 293 ALQK 296
>gi|57239610|ref|YP_180746.1| putative chromosome partitioning protein parB [Ehrlichia
ruminantium str. Welgevonden]
gi|58579599|ref|YP_197811.1| putative chromosome partitioning protein parB [Ehrlichia
ruminantium str. Welgevonden]
gi|58617653|ref|YP_196852.1| putative chromosome partitioning protein parB [Ehrlichia
ruminantium str. Gardel]
gi|57161689|emb|CAH58619.1| chromosome partitioning protein ParB [Ehrlichia ruminantium str.
Welgevonden]
gi|58417265|emb|CAI28378.1| Probable chromosome partitioning protein parB [Ehrlichia
ruminantium str. Gardel]
gi|58418225|emb|CAI27429.1| Probable chromosome partitioning protein parB [Ehrlichia
ruminantium str. Welgevonden]
Length = 289
Score = 139 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 109/289 (37%), Positives = 172/289 (59%), Gaps = 8/289 (2%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETI-PESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
+RLG+G+ LIG +S + + P + + I+ + P+ PR FE E L++L
Sbjct: 3 KRLGKGIFELIGNSTIDDNSNNATSSNVNPNNYITMPINLLNPSTSQPRKIFEKESLKEL 62
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKII-AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
+SI HGIIQP++VR + I AGERR+RA+ +A L VPVI++ V + E++
Sbjct: 63 AESIAKHGIIQPIVVRKNPHKTSYEIIAGERRWRASILAKLKSVPVIVKEVTDSQCFELS 122
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
I+EN+QR++L P+EEA Y++LI + YT D+ SI+GKSRS++ N++RIL LP S++ M
Sbjct: 123 IIENIQRQNLTPIEEAEAYKKLIDTFSYTHEDLASILGKSRSYITNMIRILLLPQSIKSM 182
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ + IS GHAR L++T + +AQ I+ ++VR TE LV++ ++
Sbjct: 183 VNDKTISFGHARALINTENAEEIAQKIIDSNLNVRQTELLVKKLQK------SKKAEEKQ 236
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ L LE+ +S + L++ I NNKG IKY+ ++QL I L
Sbjct: 237 TDTNLKKLEQSLSQTLNLDVKINGLNNKGNIIIKYKNSQQLNSILEKLK 285
>gi|307565855|ref|ZP_07628316.1| ParB-like protein [Prevotella amnii CRIS 21A-A]
gi|307345479|gb|EFN90855.1| ParB-like protein [Prevotella amnii CRIS 21A-A]
Length = 303
Score = 139 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 172/300 (57%), Gaps = 14/300 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ N LGRGL ALI S E + + + +++ I NP+ PR F+
Sbjct: 8 NRNIKTNALGRGLDALI--------STESVSTQGSSTINEVALEQIEANPNQPRREFDQT 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L SIK G++QP+ +R + + ++IIAGERR+RA+++A L +P IR + +++
Sbjct: 60 ALQELANSIKELGLVQPITLRQVADDKFQIIAGERRWRASQLAGLKAIPAYIRTIKDENV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YE L+ + G TQ + VGKSR+ +AN LR+LKLP+
Sbjct: 120 MELALVENIQREDLNAIEIALAYEHLLEKSGMTQEKVSERVGKSRAAIANYLRLLKLPAQ 179
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ ++K+EI +GHAR L+S P + I SVR E L Q+ N K+ +
Sbjct: 180 IQMSLQKKEIDMGHARALLSIDSPSLQLKLFKDIQKNGYSVRMVEGLCQQIKNGKDTQSA 239
Query: 239 IFEGSREK--EKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
++ + L++++SS + + + N KG+ I + + E+L+ I +++ +
Sbjct: 240 KDNVTKRSHLPEEFNLLKQRLSSFFDTKVQMSYNANGKGKISIPFASEEELEHIMAVMDK 299
>gi|15603938|ref|NP_220453.1| stage 0 sporulation protein J (spo0J) [Rickettsia prowazekii str.
Madrid E]
gi|12230505|sp|Q9ZE87|PARB_RICPR RecName: Full=Probable chromosome-partitioning protein parB
gi|3860629|emb|CAA14530.1| STAGE 0 SPORULATION PROTEIN J (spo0J) [Rickettsia prowazekii]
gi|292571656|gb|ADE29571.1| ParB-like partition protein [Rickettsia prowazekii Rp22]
Length = 286
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 104/298 (34%), Positives = 173/298 (58%), Gaps = 21/298 (7%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL++L+GE I+S E I+I I PN + PR +FE ++
Sbjct: 2 VKNKGLGRGLSSLLGEEVLPIES---------EIVQIINIDKIKPNENQPRKHFEYNKIK 52
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI ++G++QP+I+ + ++II GERR+RA K+A + E+PVII+N D + S+E+
Sbjct: 53 ELADSILNNGLLQPIII----DNNFQIIVGERRWRACKLAKVLEIPVIIKNFDTRESMEV 108
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR DL +EEA G++ L+ + YT + +GKSRSH+AN+LR+ LP S+++
Sbjct: 109 ALIENIQRTDLTVMEEARGFKYLVENFNYTVEKLAERLGKSRSHIANLLRLNNLPQSIQD 168
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ + +S+GHAR L++ +A I++ ++VR TE LV++ + K+
Sbjct: 169 KLNENILSMGHARCLINHEYAEEIADHIINHDLNVRQTEALVRQWHKNEYKKSSNNNNKV 228
Query: 245 EK--------EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+K + L L K +S K G+ I+I + G+ Y+ E+L +I S L
Sbjct: 229 DKLCVKDNVIDNDLELLVKALSKKFGIKITIDNCRLGGKLMFHYKNLEELDLILSKLN 286
>gi|302552687|ref|ZP_07305029.1| ParB-like partition protein [Streptomyces viridochromogenes DSM
40736]
gi|302470305|gb|EFL33398.1| ParB-like partition protein [Streptomyces viridochromogenes DSM
40736]
Length = 365
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 88/283 (31%), Positives = 149/283 (52%), Gaps = 5/283 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + I I + +I PNP PR F+ + L +L SIK G++QP+
Sbjct: 65 EEPAQPAASAAPAAPIGAHFAEIPLDAITPNPRQPREVFDEDALSELITSIKEVGLLQPV 124
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + Y++I GERR+RA + A L +P I+R D++ L A++EN+ R LNPLE
Sbjct: 125 VVRQVGPARYELIMGERRWRACREAGLEAIPAIVRATDDEKLLLDALLENLHRAQLNPLE 184
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+QL+ ++ T + + +G+SR V+N LR+LKL +V+ + +S GHAR L
Sbjct: 185 EAAAYDQLLRDFNCTHDQLADRIGRSRPQVSNTLRLLKLSPAVQRRVAAGVLSAGHARAL 244
Query: 200 V---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE--KRKKIFEGSREKEKYLTDLE 254
+ + + LA IV++ +SVR EE+V ++ + +R K L++L
Sbjct: 245 LSVEDSEEQDRLAHRIVAEGLSVRAVEEIVTLMGSRPQKAQRPKGPRAGARVSPALSELA 304
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L+ I L +
Sbjct: 305 TRLSDRFETRVKVDLGQKKGKITVEFASMEDLERILGSLAPGE 347
>gi|220919588|ref|YP_002494892.1| parB-like partition protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219957442|gb|ACL67826.1| parB-like partition protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 298
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 110/300 (36%), Positives = 169/300 (56%), Gaps = 9/300 (3%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVNQSIDSPEKKTETIPE-SQDCISIHSIVPNPHNPRNYF 58
MS +R LGRG+AAL+ + IP + + + +I NP PR F
Sbjct: 1 MSIAEKRRPALGRGMAALLSNAPPPPSAAAAPAPAIPGRTLLTLPVEAIERNPEQPRKRF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E LE+L SI+ HGI++P++VR D G Y+I+AGERR+RAA+ A L EVP ++R +
Sbjct: 61 EDAKLEELAASIRQHGIVEPILVRK-DGGRYRILAGERRWRAAQRAGLKEVPAVLREATD 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ + E+A+VEN+QR DLN +EEA YE L +++G TQ I + VGK RS VAN LR+LKL
Sbjct: 120 REAFELALVENLQRADLNAIEEAEAYEVLQADHGLTQEAIATRVGKERSTVANALRLLKL 179
Query: 179 PSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P VRE +R ++ +GHAR L+ +AQ + + +SVR TE LV+ K K
Sbjct: 180 PEDVRESVRGGQLDMGHARALLGLEDGEAIRKIAQRAIREGLSVRATEALVRSLSKKPPK 239
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICSLLG 294
+ + DL ++ ++G + ++ G+ ++Y + ++L I + +G
Sbjct: 240 AGP--SDAPADSPAIRDLAHRLQRRLGARCRVVPKSAVAGKLEVEYTSLDELDGILAKIG 297
>gi|332973050|gb|EGK10987.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Kingella
kingae ATCC 23330]
Length = 289
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 97/297 (32%), Positives = 165/297 (55%), Gaps = 17/297 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS +K LGRGL +LI N + S + I + +I + R +
Sbjct: 1 MSKA-NKGGLGRGLDSLIASSNANSHS--------DDQLRHIPVSAIKQGRYQARVQIDD 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L +S+K+ GIIQP+IVR Y++IAGERR+RAA++A LSE+P ++++ +K+
Sbjct: 52 AALAELAESVKAQGIIQPVIVREYGLDGYELIAGERRWRAAQLAGLSEIPAVVKHASDKA 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ + ++EN+QR++LNP+EEA G +LI E+ T + VG+SRS ++N LR+LKLP
Sbjct: 112 VMAMGLIENIQRENLNPIEEAQGLRRLIDEFELTHEYVAEAVGRSRSAISNSLRLLKLPE 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR+L++ LA V SVR+ E +++ ++ K
Sbjct: 172 PVQEMLFNKHLEMGHARSLINLPVNAQLELANKAVKNGWSVREMERR-----SQQVQQGK 226
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
S++ + + L I+ +G+ IK R KG+ + +++ + + LG
Sbjct: 227 TPTASQQIDPDVVRLTDAITESLGVATEIKTRDRKKGKIVLHFDSADTFDALMKRLG 283
>gi|325972862|ref|YP_004249053.1| parB-like partition protein [Spirochaeta sp. Buddy]
gi|324028100|gb|ADY14859.1| parB-like partition protein [Spirochaeta sp. Buddy]
Length = 317
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 105/315 (33%), Positives = 181/315 (57%), Gaps = 15/315 (4%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVNQSID-------SPEKKTETIPESQDCISIHSIVPNPH 52
MS SK+ LG+G+ +L+ + + S +K + +S+ ++ NP+
Sbjct: 1 MSQETSKKHGLGKGIGSLMQDYSFDSVLDTALGFSSDKNVRDGQQKVLEVSLENVRANPN 60
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI 112
PR F E L++L QSIK G++QP++V I G Y I+AGERR+RA+K+A LS+VPV+
Sbjct: 61 QPRKDFNQESLQELAQSIKREGVLQPILVEEIAPGQYSIVAGERRYRASKLAGLSKVPVL 120
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
+++ LE++++EN+QR++LNP+EEA Y LI E G TQ ++ +GK+RS ++N
Sbjct: 121 VKDFTQMQRLEVSLIENIQRENLNPIEEAKAYAYLIQEAGITQEELAQRMGKNRSTISNS 180
Query: 173 LRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
+R+L+L S++++ + + S G AR ++V+ +D L + ++ K +SVR TE+L +
Sbjct: 181 IRLLQLSSTMQQDLLTGKFSAGQARAILSVVNPADREILYRTVLEKDLSVRATEQLAAQF 240
Query: 230 D----NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQ 285
+ + +K+ + + K + E K VG + IK KG+ I Y T+E+
Sbjct: 241 NMGKRAAYQSKKRRAKKNLAKSPDIIAAEDKFLHAVGSQVEIKGSLEKGKLEIPYTTSEE 300
Query: 286 LKIICSLLGENDFEY 300
L+ + LL N +
Sbjct: 301 LERLYQLLVPNQELF 315
>gi|197124870|ref|YP_002136821.1| parB-like partition protein [Anaeromyxobacter sp. K]
gi|196174719|gb|ACG75692.1| parB-like partition protein [Anaeromyxobacter sp. K]
Length = 298
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 110/300 (36%), Positives = 169/300 (56%), Gaps = 9/300 (3%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVNQSIDSPEKKTETIPE-SQDCISIHSIVPNPHNPRNYF 58
MS +R LGRG+AAL+ + IP + + + +I NP PR F
Sbjct: 1 MSIAEKRRPALGRGMAALLSNAPPPPSAAAAPAPAIPGRTLLTLPVEAIERNPEQPRKRF 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E LE+L SI+ HGI++P++VR D G Y+I+AGERR+RAA+ A L EVP ++R +
Sbjct: 61 EDAKLEELAASIRQHGIVEPILVRK-DGGRYRILAGERRWRAAQRAGLKEVPAVLREATD 119
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ + E+A+VEN+QR DLN +EEA YE L +++G TQ I + VGK RS VAN LR+LKL
Sbjct: 120 REAFELALVENLQRADLNAIEEAEAYEVLQADHGLTQEAIATRVGKERSTVANALRLLKL 179
Query: 179 PSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P VRE +R ++ +GHAR L+ +AQ + + +SVR TE LV+ K K
Sbjct: 180 PEDVRESVRGGQLDMGHARALLGLEDGEAIRKVAQRAIREGLSVRATEALVRSLSKKPPK 239
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICSLLG 294
+ + DL ++ ++G + ++ G+ ++Y + ++L I + +G
Sbjct: 240 AGP--SDAPADSPAIRDLAHRLQRRLGARCRVVPKSAVAGKLEVEYTSLDELDGILAKIG 297
>gi|296395439|ref|YP_003660323.1| parB-like partition protein [Segniliparus rotundus DSM 44985]
gi|296182586|gb|ADG99492.1| parB-like partition protein [Segniliparus rotundus DSM 44985]
Length = 323
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 93/310 (30%), Positives = 152/310 (49%), Gaps = 18/310 (5%)
Query: 1 MSNNYSKRRLGRGLAALIG--------------EVNQSIDSPEKKTETIPESQDCISIHS 46
MS N K LG+GLAALI +V S + S I +
Sbjct: 1 MS-NQRKGGLGKGLAALIPTGQGSGPKLGDSAADVLIPPGSRPFTADGQLASYQEIDVEQ 59
Query: 47 IVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL 106
I PNP PR F+ E L +L SI+ G++QP++VR G Y+++ GERR RA K A L
Sbjct: 60 IEPNPQQPRQVFDEEALTELTHSIREFGLLQPVVVRPTSLGRYQLVVGERRLRATKAAGL 119
Query: 107 SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSR 166
+++P I+++ + L A++EN+ R LNPLEEA Y+QL+ ++G T + +G+SR
Sbjct: 120 AKIPAIVKHTADDDLLRDALLENIHRAQLNPLEEAAAYQQLLEDFGATHEQLAERLGRSR 179
Query: 167 SHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELV 226
S V+N LR+L+LP V+ + +S GHAR L+ + + S+ ++ + V
Sbjct: 180 SLVSNTLRLLRLPVGVQRKVAAGVLSAGHARALLGLDGHTEAQEDLASRIIAEGLSVRAV 239
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDL---EKKISSKVGLNISIKHRNNKGQFCIKYETN 283
+E + + R K +L ++S + + + KG+ I++ +
Sbjct: 240 EEAVTLSSHKTRTKPRGRAKAAPPEELAIVADRLSLALDTTVQVGLTAKKGRIVIEFGSV 299
Query: 284 EQLKIICSLL 293
L+ I +
Sbjct: 300 ADLERIADQI 309
>gi|118594205|ref|ZP_01551552.1| ParB-like partition protein [Methylophilales bacterium HTCC2181]
gi|118439983|gb|EAV46610.1| ParB-like partition protein [Methylophilales bacterium HTCC2181]
Length = 281
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 103/293 (35%), Positives = 166/293 (56%), Gaps = 15/293 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+ E + E +SI +V + PR + L+
Sbjct: 1 MKNKGLGRGLDALLSN-------EESDKQHNTEGLTMLSITKLVSGQYQPRKTMNQQQLD 53
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SIKS GI+QP++VR + + Y+IIAGERR++A+K+A + VPV+I+N+ + S L +
Sbjct: 54 ELAESIKSQGIMQPILVRKLTDERYEIIAGERRWQASKLAGIESVPVLIKNIPDSSVLAM 113
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +EEA G ++LI E+ T +GKSR+ V+NILR+L L V+
Sbjct: 114 ALIENIQREDLNVIEEAQGIKRLIDEFNMTHESAADTLGKSRTSVSNILRLLNLSEHVQS 173
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
I + +I +GHAR L + + L Q I+ +K++VRD E++V + +
Sbjct: 174 AILENKIEMGHARALLSLDLDQQVMLCQKIIHQKLTVRDVEKIVSNKKA-----VTLNRE 228
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
++ ++ + LE IS +G+ +SI+H+ G I Y EQL + L
Sbjct: 229 AKIVDEDIARLENDISEMLGMRVSIQHKSKGNGTLKINYPNLEQLDAVIKKLK 281
>gi|302543973|ref|ZP_07296315.1| ParB family protein [Streptomyces hygroscopicus ATCC 53653]
gi|302461591|gb|EFL24684.1| ParB family protein [Streptomyces himastatinicus ATCC 53653]
Length = 366
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 86/270 (31%), Positives = 144/270 (53%), Gaps = 5/270 (1%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
E + + I PNP PR F+ + L +L SI+ G++QP++VR + Y++I
Sbjct: 79 EVAGAHFAELPLDFITPNPRQPREVFDEDALAELVTSIQEVGLLQPVVVRQLAPERYELI 138
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
GERR+RA + A L ++P I+R D++ L A++EN+ R LNPLEEA Y+QL+ ++
Sbjct: 139 MGERRWRACREAGLEKIPAIVRATDDEKLLLDALLENLHRAQLNPLEEAAAYDQLLKDFN 198
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLA 209
T +++ +G+SR V+N LR+LKL SV+ + +S GHAR L+ + LA
Sbjct: 199 CTHDELADRIGRSRPQVSNTLRLLKLSPSVQRRVAAGVLSAGHARALLSVEDGEEQDRLA 258
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIF--EGSREKEKYLTDLEKKISSKVGLNISI 267
IV++ +SVR EE+V ++ K LTDL ++S + + +
Sbjct: 259 HRIVAEGLSVRAVEEIVTLMGSRSGGAPKAKGPRAGARVSPALTDLASRLSDRFETRVKV 318
Query: 268 KHRNNKGQFCIKYETNEQLKIICSLLGEND 297
KG+ +++ + + L+ I L +
Sbjct: 319 DLGQKKGKIVVEFASIDDLERILGTLAPGE 348
>gi|223936790|ref|ZP_03628700.1| parB-like partition protein [bacterium Ellin514]
gi|223894641|gb|EEF61092.1| parB-like partition protein [bacterium Ellin514]
Length = 306
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 100/278 (35%), Positives = 159/278 (57%), Gaps = 4/278 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+I + + IS++ I P PR F E L +L SIK GI+QPL
Sbjct: 26 SAPAAITTSAAPVPDTRDRVQRISLNRIRPCSFQPRKAFSDEALRELADSIKEQGIVQPL 85
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
IVR +++IAGERR+RA+++ L+EVPVI+R D+KS LE+A++EN+QR++LNPLE
Sbjct: 86 IVRDRG-DHFELIAGERRWRASQLLGLAEVPVIVREADDKSVLELALIENLQRENLNPLE 144
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA GY QLI ++ Q+D+ + VGKSR+ VAN LR+LKL S++E+IR ++S+GHA+ +
Sbjct: 145 EAQGYSQLIEQFQLKQDDVATKVGKSRAVVANALRLLKLAPSIQELIRNGKLSVGHAKVI 204
Query: 200 ---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
S A ++ ++VR TE LV + + DLE K
Sbjct: 205 LGLPSEKLQKQAADKVIRDGLNVRQTETLVAHLQALGRATTSTPPSPVAPDANILDLESK 264
Query: 257 ISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + G + +K+ KG + + ++++L+ + ++G
Sbjct: 265 LRERFGTKVRLKYAQGKGSLEVAFFSDDELERLLQIVG 302
>gi|332297031|ref|YP_004438953.1| parB-like partition protein [Treponema brennaborense DSM 12168]
gi|332180134|gb|AEE15822.1| parB-like partition protein [Treponema brennaborense DSM 12168]
Length = 310
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 105/307 (34%), Positives = 168/307 (54%), Gaps = 18/307 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSID------------SPEKKTETIPESQDCISIHSIVPNPH 52
+K LG+GL ALI E + + + + +VPNPH
Sbjct: 1 MAKSALGKGLGALIQESEEENRFSAAAAAAAPAVQLPEGLVMESDGILFADVSKLVPNPH 60
Query: 53 NPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI 112
PR FE++ L++L SI+ HGIIQP+ V NG + IIAGERR RAA++A L+ +PV
Sbjct: 61 QPRAEFEADALQELADSIREHGIIQPVTVEDAGNGSFYIIAGERRTRAARLAGLTRIPVQ 120
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
++ + LEIA++EN+QR+DLNP+EEA Y +L+ +Q+++ VGK+RS VAN
Sbjct: 121 LKKYSEERKLEIALIENIQREDLNPIEEASAYYKLMQLGNLSQDELARRVGKNRSTVANA 180
Query: 173 LRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
LR+LKLP ++ + IS GHAR ++++ SD L I MSVR+ E+ +
Sbjct: 181 LRLLKLPEDMQHALASGLISAGHARAILSVLNPSDQRVLFGRITGSGMSVREAEQYASDL 240
Query: 230 DNKKE---KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
+N KK+ + +++ + +E++ +G ++IK +G I+Y + + L
Sbjct: 241 NNGSRAAGAAKKVKDKTQDISPEMVSIEQQFIDALGTKVAIKGSFERGCISIEYFSRDDL 300
Query: 287 KIICSLL 293
+ SL+
Sbjct: 301 DRLYSLI 307
>gi|305681627|ref|ZP_07404433.1| ParB-like protein [Corynebacterium matruchotii ATCC 14266]
gi|305658787|gb|EFM48288.1| ParB-like protein [Corynebacterium matruchotii ATCC 14266]
Length = 360
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 112/326 (34%), Positives = 170/326 (52%), Gaps = 37/326 (11%)
Query: 7 KRRLGRGLAALI------------------GEVNQSIDSPEKKT--------ETIPESQ- 39
K LGRGLAALI G D+ E T E +PE++
Sbjct: 5 KGGLGRGLAALITNQPDSRLGDNAADIVIGGARKPEPDAEETPTSAALRPQLEVVPETEL 64
Query: 40 ----DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
I I PNP NPR F++ L++L SIK G++QP++VR + Y+++ GE
Sbjct: 65 AAHYQEIPTDLIDPNPKNPRKVFDNFDLDELVHSIKEFGLLQPIVVRRSGDR-YELVMGE 123
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAA A L +P I+R D+ S L A++ENV R LNPLEEA YEQL+ E+G TQ
Sbjct: 124 RRWRAATQAGLDTIPAIVRKTDDDSMLRDALLENVHRVQLNPLEEAAAYEQLLEEFGVTQ 183
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV----STSDPLSLAQV 211
+++ +G+SR V N+LR+LKLP +V++ + +S GHAR L+ LA
Sbjct: 184 SELADKLGRSRPVVTNMLRLLKLPVAVQQKVAAGVLSAGHARALLAINEDQEGQERLANR 243
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN 271
IVS+ +SVR TEE V + + + + E YLT + ++ + +S+
Sbjct: 244 IVSEGLSVRATEEAVVLLSHGETGPVRKCAKAPMPE-YLTTAAESLADNLDTKVSVSMGK 302
Query: 272 NKGQFCIKYETNEQLKIICSLLGEND 297
+KG+ +++ + + I LL ++
Sbjct: 303 HKGRIVVEFGGKDDFERIMGLLSGDE 328
>gi|78486511|ref|YP_392436.1| parB-like partition proteins [Thiomicrospira crunogena XCL-2]
gi|78364797|gb|ABB42762.1| chromosome segregation DNA-binding protein [Thiomicrospira
crunogena XCL-2]
Length = 289
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 107/299 (35%), Positives = 176/299 (58%), Gaps = 14/299 (4%)
Query: 1 MSNNYSKRRLG-RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + +G RG+ ALIG ++ S D I+++ +VP + PR F
Sbjct: 1 MAK--KRSGMGKRGVNALIGGKQKADSS------IADLRVDKIAVNRLVPGEYQPRQQFG 52
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L++L SI+ GI+QP++V+AI N Y+IIAGERR+RAA+ A L VPV+IR DN+
Sbjct: 53 EEALQELADSIRIQGIVQPIVVKAIGNEQYEIIAGERRWRAAQKAGLELVPVVIRKADNQ 112
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++L +A++EN+QR+DLNP+E ALG ++L+ E+ TQ + VG+SR+ V N+LR+LKLP
Sbjct: 113 TTLAMALIENIQREDLNPIETALGLKRLMQEFDLTQQAVADAVGRSRAAVTNLLRLLKLP 172
Query: 180 SSVREMIRKEEISLGHARTLVSTSD--PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+++ + + ++S+GHAR +++ + L +A+ + K +VRD EE VQ +
Sbjct: 173 QNIQNWLHEGKLSMGHARAIITLPEAIQLEMAEQAILKNWTVRDIEEAVQ--KVLVPAAQ 230
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
K E L ++ ++ KV N+ I + +G+ I Y++ +L I L +
Sbjct: 231 KKTNNRPELPAQLQKHQQFLADKVAANVKISQGSKGRGKIEIAYKSEAELNRILEELSK 289
>gi|187251944|ref|YP_001876426.1| putative transcriptional regulator [Elusimicrobium minutum Pei191]
gi|186972104|gb|ACC99089.1| putative transcriptional regulator [Elusimicrobium minutum Pei191]
Length = 294
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 86/296 (29%), Positives = 156/296 (52%), Gaps = 10/296 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
S++ LG+GL AL+ + + + + + + I + SIVPN PR F E L+
Sbjct: 1 MSRQALGKGLDALLKQTQEVLGTKDTAV-KAGANIQKIPLTSIVPNRFQPRRTFNEETLK 59
Query: 65 DLCQSIKSHGIIQPL-IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSL 122
+L +SIK HG+ QP+ +V Y+I+ GERRFRA K+A +E+ I+ + +K
Sbjct: 60 ELAESIKQHGLTQPIVVVFDAGLNKYEIVVGERRFRATKLAGFTEIEAIVHSSLGDKEMS 119
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
+A++EN+QR+DLNP+E ALGY+ L+ ++ +Q D+ GKS++ ++N LR+L L +
Sbjct: 120 ALALIENIQREDLNPIETALGYKSLMQKFHVSQTDLAGYCGKSKAAISNSLRLLDLSKEI 179
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ + + +S GH R L+ D + + ++ + V++ + + +
Sbjct: 180 QKTLEEGILSEGHGRALLMVPDLKKREILF----IKLKSGKFSVRQAEQAAREIMTVKTS 235
Query: 243 SREKEK-YLTDLEKKISSKVGLNISIKHRN--NKGQFCIKYETNEQLKIICSLLGE 295
+ + + D E + +G + +K+ KG I+Y + EQL+ I L
Sbjct: 236 APAQRPVEVVDFENNLQKALGTKVEVKYGKSMKKGSLVIQYNSLEQLENIADRLKS 291
>gi|270290032|ref|ZP_06196258.1| ParB family chromosome partitioning protein [Pediococcus
acidilactici 7_4]
gi|270281569|gb|EFA27401.1| ParB family chromosome partitioning protein [Pediococcus
acidilactici 7_4]
Length = 283
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 98/266 (36%), Positives = 156/266 (58%), Gaps = 6/266 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKI 91
S + + I PNP PR F+ + L +L SI+ GI QPL++R Y+I
Sbjct: 13 PENASYQMVEVDKIRPNPFQPRRIFDKKKLAELADSIRESGIFQPLVLRQPIAAIERYEI 72
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
IAGERR+RA+ +A L++VP IIR+ ++++ E AIVEN+QR+DL+PLEEA Y+ +I E
Sbjct: 73 IAGERRYRASIIAGLTKVPAIIRDFSDETTREAAIVENLQREDLSPLEEAEAYQAMIKEL 132
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSL 208
G TQ + +GKSR ++AN LR+L LP+SV+E+++ +IS+G ART + L
Sbjct: 133 GLTQAQVSERLGKSRPYIANYLRLLGLPTSVKELLQSGKISMGQARTLLAVKQERQLEKL 192
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI-SI 267
AQ V + ++VR E +V + + K + + + K ++ ++E +++ ++G +
Sbjct: 193 AQRTVQEGLTVRQLESIVNQINATKAPKAESKTAQQRKSPFIREIENQLAERLGTKTLVV 252
Query: 268 KHRNNKGQFCIKYETNEQLKIICSLL 293
H KG+ I YE+ L I LL
Sbjct: 253 AHSKQKGKIEINYESMSDLNRILELL 278
>gi|157826534|ref|YP_001495598.1| ParB-like partition proteins [Rickettsia bellii OSU 85-389]
gi|150385328|sp|Q1RGT4|PARB_RICBR RecName: Full=Probable chromosome-partitioning protein parB
gi|157801838|gb|ABV78561.1| ParB-like partition proteins [Rickettsia bellii OSU 85-389]
Length = 287
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 100/293 (34%), Positives = 172/293 (58%), Gaps = 17/293 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL++L+GE S + E I+I I PN + PR +FE + ++
Sbjct: 1 MKNKGLGRGLSSLLGEEVISTEKES------LEIVQIINIDRIKPNENQPRKHFEYDKIK 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI ++G++QP+I+ + ++IIAGERR+RA K+A +SE+PVII+N+D K S+EI
Sbjct: 55 ELSDSILNNGLLQPIII----DNSFQIIAGERRWRACKLAKISEIPVIIKNLDAKESMEI 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR DL +EEA G++ L+ + YT + +GKSRSH+AN+LR+ LP S++
Sbjct: 111 ALIENIQRSDLTVMEEARGFKYLVENFNYTAEKLAERLGKSRSHIANLLRLNNLPQSIQN 170
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE--- 241
+ + +S+GHAR L++ +A ++ ++VR TEELV++ + +
Sbjct: 171 KLDENTLSMGHARCLINHEHAEIIANYVIDNDLNVRQTEELVRQWSQNEYTKYPDNNRIG 230
Query: 242 ----GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
+ ++ L L K +S K + ++I++ + G+ Y+ ++L I
Sbjct: 231 KQLFKEKTEDNDLQSLVKILSEKFNIKVTIENYSLGGKLIFHYKDLKELDKIL 283
>gi|153007338|ref|YP_001381663.1| parB-like partition protein [Anaeromyxobacter sp. Fw109-5]
gi|152030911|gb|ABS28679.1| parB-like partition protein [Anaeromyxobacter sp. Fw109-5]
Length = 298
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 161/302 (53%), Gaps = 13/302 (4%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVNQSIDSPEKKTE---TIPESQDCISIHSIVPNPHNPRN 56
MS +R LGRG+AAL+ + + + +I NP PR
Sbjct: 1 MSLADKRRPALGRGMAALLSNAPPPPSAAAAPASTPAVSGRGLLSLPLEAIERNPEQPRK 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
F+ LE+L SI+ HG+++P++VR + AGERR+RAA+ A L E+P ++R
Sbjct: 61 RFDEAKLEELAASIREHGVVEPILVRKQGAKYRIV-AGERRWRAAQRAELREIPALVRET 119
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++ + EIA++EN+QR DLN +EEA YE L SE+ TQ++I VGK RS VAN LR+L
Sbjct: 120 SDREAFEIALIENLQRADLNAIEEAEAYEVLASEHALTQDEIAKRVGKERSTVANALRLL 179
Query: 177 KLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
KLP VR+ +R+ ++ +GHAR L AQ ++ + +SVR TE LV+ K+
Sbjct: 180 KLPEEVRDAVRQGQLDMGHARALLGAADAEAMRRAAQKVIREGLSVRATEALVRALGRKE 239
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICSL 292
+ + L +++ ++G + ++ G+ ++Y + ++L I +
Sbjct: 240 SD----RPAPASESPAVKALNQRLQRRLGARCKVVPKSAVAGRLEVEYTSLDELDGILAK 295
Query: 293 LG 294
+G
Sbjct: 296 IG 297
>gi|170750487|ref|YP_001756747.1| parB-like partition protein [Methylobacterium radiotolerans JCM
2831]
gi|170657009|gb|ACB26064.1| parB-like partition protein [Methylobacterium radiotolerans JCM
2831]
Length = 306
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 125/301 (41%), Positives = 189/301 (62%), Gaps = 9/301 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +K RLGRGLAALIG+ N++ + K E Q + I + NP NPR F
Sbjct: 10 MAEEGAKPRLGRGLAALIGDFNEAGRASAKAEE-----QRRVQIEFLRANPRNPRRSFAE 64
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L SI GIIQP++VR I + Y+I+AGERR+RAA+ A L EVPV++ +D+
Sbjct: 65 TELSELAASIGQRGIIQPIVVRPIGDVPGTYEIVAGERRWRAAQRAGLDEVPVVVVEIDD 124
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ SLE AI+ENVQR DLN +EEA GYE+L+ ++ YTQ ++ I+GKSRSH+AN LR+L L
Sbjct: 125 RGSLEFAILENVQRTDLNAIEEASGYERLMKDFSYTQKELAEILGKSRSHLANTLRLLNL 184
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P SV+E + E++ GHAR L++ DP + A+ +V++ +SVRD E + + E +
Sbjct: 185 PLSVQERVTAGELTAGHARALLAVRDPEATARRVVAESLSVRDVEAIASAEAAPAETPRP 244
Query: 239 IFEG-SREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLGEN 296
S E+ + DLE +I +G+ +S K ++ + G+ I+YET ++L+ + + +
Sbjct: 245 GRPRLSAERPATVRDLELRIHRALGVPVSYKPKDADSGEIRIRYETQDELQALLNRFKVS 304
Query: 297 D 297
D
Sbjct: 305 D 305
>gi|221195344|ref|ZP_03568400.1| stage 0 sporulation protein J [Atopobium rimae ATCC 49626]
gi|221185247|gb|EEE17638.1| stage 0 sporulation protein J [Atopobium rimae ATCC 49626]
Length = 289
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 98/300 (32%), Positives = 172/300 (57%), Gaps = 19/300 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LG+GL++LI E N P++ T +++ + PN PR F+
Sbjct: 1 MA---KKSGLGKGLSSLINEANAETGRPKETTV--------LAVSKLKPNKDQPRKQFDE 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L SIK +G++QPL+VR +G ++I+AGERR++AAK A L +VPVIIR++ ++
Sbjct: 50 TELEELADSIKQNGVLQPLLVRKKGSG-FEIVAGERRYQAAKKAGLKDVPVIIRDISDEE 108
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++A++EN+QR +L+P+EEA GY++LI + G TQ + I+ KSRS + N LR+L LP
Sbjct: 109 VFKLALIENLQRSNLSPIEEARGYQELIKKDGLTQEQLSKIISKSRSAITNTLRLLDLPK 168
Query: 181 SVREMIRKEEISLGHARTLVS---TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++E + ++S GHAR +++ L LAQ ++ + +SVR TE L ++ +
Sbjct: 169 EIQEYMALGQLSAGHARAILAVAGEEGRLKLAQKVIEENLSVRQTENLAPLFSGRENVKV 228
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ + +++ + + +++ K + I++ +E+L + LL + D
Sbjct: 229 QRQPLPQT----YKRAARQLRLALDTTVKVRNIRGKNKIEIEFSDDEELARLVGLLTQGD 284
>gi|313205629|ref|YP_004044806.1| parb-like partition protein [Riemerella anatipestifer DSM 15868]
gi|312444945|gb|ADQ81300.1| parB-like partition protein [Riemerella anatipestifer DSM 15868]
gi|315022640|gb|EFT35665.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Riemerella anatipestifer RA-YM]
gi|325334943|gb|ADZ11217.1| Predicted transcriptional regulator [Riemerella anatipestifer
RA-GD]
Length = 296
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 94/293 (32%), Positives = 158/293 (53%), Gaps = 5/293 (1%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSI--DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
KR +GRGL A++ ++ + ++ + I S I+I I PNP+ PR YF+
Sbjct: 1 MKDKKRAMGRGLGAILNAEKKATINTATDEGAKQIMGSIVEINIEDIYPNPNQPRTYFDE 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L L QSIK+ G+IQ I D ++II+GERR+RA+++A L +P IR V+++
Sbjct: 61 DALNQLAQSIKNLGVIQ-PITLRKDGARFEIISGERRYRASQIAGLKTIPAYIRLVNDQE 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A+VEN+QR+DL+ +E AL Y++L+ E G TQ ++ +GK RS + N +R+L+L
Sbjct: 120 LLEMALVENIQREDLDAIEIALTYQRLLEEIGMTQENLSQRIGKERSTITNYIRLLRLSP 179
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V+ IR IS GH R ++S D ++ + + K +++
Sbjct: 180 EVQGAIRTGAISAGHGRAIISLQDEKLQQELFDKIIKEQLNVRQAEAVASGLKNPKERKN 239
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIK--HRNNKGQFCIKYETNEQLKIICS 291
+ RE +L +K +S + + + IK KG+ + E+L+ I +
Sbjct: 240 KVERELPNHLKRTQKSLSDLLDIKVDIKASANGKKGKIVFDFNNEEELERILN 292
>gi|297200931|ref|ZP_06918328.1| chromosome-partitioning protein parB [Streptomyces sviceus ATCC
29083]
gi|297147772|gb|EDY60931.2| chromosome-partitioning protein parB [Streptomyces sviceus ATCC
29083]
Length = 366
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 89/283 (31%), Positives = 152/283 (53%), Gaps = 5/283 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E PE + + + SI PNP PR F+ + L++L SI+ G++QP+
Sbjct: 66 ETPSVNGYPETPAPPMGAHFAELPLDSITPNPRQPREVFDEDALQELVTSIQEVGLLQPV 125
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + Y++I GERR+RA++ A L +P I+R ++ L A++EN+ R LNPLE
Sbjct: 126 VVRQVGPARYELIMGERRWRASREAGLDAIPAIVRATEDDKLLLDALLENLHRAQLNPLE 185
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+QL+ ++ T + + +G+SR V+N LR+LKL SV+ + +S GHAR L
Sbjct: 186 EAAAYDQLLKDFNCTHDQLADRIGRSRPQVSNTLRLLKLSPSVQRRVAAGVLSAGHARAL 245
Query: 200 V---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE--KRKKIFEGSREKEKYLTDLE 254
+ + + LA IV++ +SVR EE+V ++ + +R K L++L
Sbjct: 246 LSVEDSEEQDRLAHRIVAEGLSVRAVEEIVTLMGSRPQTAQRSKGPRAGARVSPALSELA 305
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L+ I S L +
Sbjct: 306 TRLSDRFETRVKVDLGQKKGKITVEFASMEDLERILSSLAPGE 348
>gi|312200971|ref|YP_004021032.1| parB-like partition protein [Frankia sp. EuI1c]
gi|311232307|gb|ADP85162.1| parB-like partition protein [Frankia sp. EuI1c]
Length = 313
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 90/268 (33%), Positives = 154/268 (57%), Gaps = 5/268 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ I + + PNP PR F+ E LE+L S++ G++QP++VR +
Sbjct: 44 SEPVPVHGAVFREIPVDWVEPNPRQPRTVFDEEALEELAASLREVGLLQPVVVREVLPDR 103
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+++ GERR+RA+K+A L+E+P I+R + L A++EN+ R+ LNPLEEA YEQL+
Sbjct: 104 YELVMGERRWRASKLAGLTEIPAIVRETADDQMLRDALLENLHRQQLNPLEEAAAYEQLL 163
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDP 205
E+G T + + S +G+SRSHV N +R+L LP +V+ + +S GHAR L+ T
Sbjct: 164 REFGATHDQLASKLGRSRSHVTNTIRLLALPPAVQRRVAAGVLSAGHARALLALEDTEAQ 223
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
LA IV++ +SVR EE+V ++ RK+ R L+ + +++S ++ +
Sbjct: 224 DRLATRIVAEGLSVRAVEEIV--ALGEEGPRKRAPRSPRHTPPALSQVAERLSDRLDTKV 281
Query: 266 SIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ N+G+ +++ + E L+ I + +
Sbjct: 282 KVDMGRNRGKITVEFASIEDLERIVAAI 309
>gi|302877163|ref|YP_003845796.1| parB-like partition protein [Clostridium cellulovorans 743B]
gi|307687862|ref|ZP_07630308.1| stage 0 sporulation protein J [Clostridium cellulovorans 743B]
gi|302580020|gb|ADL54032.1| parB-like partition protein [Clostridium cellulovorans 743B]
Length = 290
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 107/286 (37%), Positives = 181/286 (63%), Gaps = 15/286 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS KR LG+GL ALI E + KT + I I+ I N PR F+
Sbjct: 1 MS---RKRGLGKGLGALIPEEEIIDEVSNSKT------VNLIGINKIKANSEQPRKSFDD 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E + +L +SIK +G+IQPL+++ +G Y I+AGERR+RA K+A++ EVP +I ++D+KS
Sbjct: 52 EKIGELAKSIKEYGVIQPLVLKQNFDGTYTIVAGERRWRACKLAAIKEVPAVIMDLDDKS 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE++++EN+QR+DLNP+EEA+ Y++L++++ TQ + +GKSR+ ++NI+R+L L
Sbjct: 112 VLEVSLIENIQREDLNPIEEAIAYKKLLNDFDLTQEQLSERIGKSRTAISNIMRLLALDV 171
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+E + + IS GH R ++ + LAQ+I+ K++SVR+ E ++++ KKE+ +
Sbjct: 172 RVQEYLMEGIISEGHGRAILGIEDLNKQYELAQMIIDKRLSVREIENIIKDFKTKKEEVE 231
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYET 282
E + EK ++ DLE ++ + ++I ++ NKG+ I+Y +
Sbjct: 232 --IEKNYEKNPHIKDLEGRLQNYFDTKVAITNKKDNKGKIEIQYYS 275
>gi|116750032|ref|YP_846719.1| parB-like partition proteins [Syntrophobacter fumaroxidans MPOB]
gi|116699096|gb|ABK18284.1| parB-like partition proteins [Syntrophobacter fumaroxidans MPOB]
Length = 285
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 98/298 (32%), Positives = 160/298 (53%), Gaps = 15/298 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL L+ SP + I + PNP+ PR
Sbjct: 1 MAE--KKRGLGRGLNELL--------SPANWLKGTDIQLFYCPIDRLQPNPYQPRQNIRD 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
L++L +S++S GI+QP++V D Y+IIAGERR+RAA +A L EVPV++R +
Sbjct: 51 GELDELVESVRSKGILQPILVTRTADRDRYQIIAGERRWRAAGLAGLGEVPVLLREATSS 110
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+LE A++EN+QRKDLN +EEAL +L E+ TQ DI VG+ RS VAN+LRIL+LP
Sbjct: 111 EALEFALIENIQRKDLNCIEEALAIRKLQEEFHLTQQDIADRVGRDRSTVANLLRILQLP 170
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++E + + I++GHAR L+S D + ++ + V+E + + +
Sbjct: 171 GDIQEKVLNDAITMGHARALLSLPDAEAQRRLCGL----IISRGLSVRETEQLAARGQAP 226
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++ L L + + ++G+ + +K + +G + + + ++ + + LG N
Sbjct: 227 PPPKEAEDPGLAGLSRALQDRLGVKVRLKRKGERGSITLSFRSEQEFQALLDRLGLNS 284
>gi|296123140|ref|YP_003630918.1| parB-like partition protein [Planctomyces limnophilus DSM 3776]
gi|296015480|gb|ADG68719.1| parB-like partition protein [Planctomyces limnophilus DSM 3776]
Length = 314
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 22/305 (7%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
S+RRLGRGL AL+G + + P + I + NP R F+S+ + +
Sbjct: 10 SRRRLGRGLNALLGSGHHHENEPVSNV----GDHSEVHIDLLERNPFQARKDFDSQAINE 65
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SI+ HG++QP+IVR I +Y++IAGERR AA+ A VP + + ++ E++
Sbjct: 66 LADSIRQHGVLQPIIVRQIG-DMYQVIAGERRLIAARKAGCETVPCRVLELSDQQVFEVS 124
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
+ EN++R+DLN LE+A +++ ++++ + ++ + RS V+N +R+L+L V+EM
Sbjct: 125 LEENLKRQDLNVLEKAQSFQEYLNQFQCSIEELSRRLSMDRSTVSNFIRLLELAGPVQEM 184
Query: 186 IRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+R+ +++ GHAR ++S S + AQ I S+ +SVR TE+ V+ + +
Sbjct: 185 VRQSQLTGGHARAMLSLSHDQQVTLAQRIASEGLSVRKTEDAVRSLQAEGTVEEGATVPF 244
Query: 244 REK------------EKYLTDLEKKISSKVGLNISIKHRNN---KGQFCIKYETNEQLKI 288
++ ++ L++++ +G ++IK + KG I++ +N+ +
Sbjct: 245 QQSGNEAGSGSQQGLSNHVLMLQEQLQGMLGAKVAIKLKGKAKDKGSIVIEFTSNDDFER 304
Query: 289 ICSLL 293
I L
Sbjct: 305 ILGSL 309
>gi|91206164|ref|YP_538519.1| ParB-like partition proteins [Rickettsia bellii RML369-C]
gi|91069708|gb|ABE05430.1| ParB-like partition proteins [Rickettsia bellii RML369-C]
Length = 316
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 100/293 (34%), Positives = 172/293 (58%), Gaps = 17/293 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL++L+GE S + E I+I I PN + PR +FE + ++
Sbjct: 30 MKNKGLGRGLSSLLGEEVISTEKES------LEIVQIINIDRIKPNENQPRKHFEYDKIK 83
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI ++G++QP+I+ + ++IIAGERR+RA K+A +SE+PVII+N+D K S+EI
Sbjct: 84 ELSDSILNNGLLQPIII----DNSFQIIAGERRWRACKLAKISEIPVIIKNLDAKESMEI 139
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR DL +EEA G++ L+ + YT + +GKSRSH+AN+LR+ LP S++
Sbjct: 140 ALIENIQRSDLTVMEEARGFKYLVENFNYTAEKLAERLGKSRSHIANLLRLNNLPQSIQN 199
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE--- 241
+ + +S+GHAR L++ +A ++ ++VR TEELV++ + +
Sbjct: 200 KLDENTLSMGHARCLINHEHAEIIANYVIDNDLNVRQTEELVRQWSQNEYTKYPDNNRIG 259
Query: 242 ----GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
+ ++ L L K +S K + ++I++ + G+ Y+ ++L I
Sbjct: 260 KQLFKEKTEDNDLQSLVKILSEKFNIKVTIENYSLGGKLIFHYKDLKELDKIL 312
>gi|225020855|ref|ZP_03710047.1| hypothetical protein CORMATOL_00863 [Corynebacterium matruchotii
ATCC 33806]
gi|224946337|gb|EEG27546.1| hypothetical protein CORMATOL_00863 [Corynebacterium matruchotii
ATCC 33806]
Length = 360
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 111/326 (34%), Positives = 170/326 (52%), Gaps = 37/326 (11%)
Query: 7 KRRLGRGLAALI------------------GEVNQSIDSPEKKT--------ETIPESQ- 39
K LGRGLAALI G D+ E T E +PE++
Sbjct: 5 KGGLGRGLAALITNQPDSRLGDNAADIVIGGARKPEPDAEETPTSAALRPQLEVVPETEL 64
Query: 40 ----DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
I I PNP NPR F++ L++L SIK G++QP++VR + Y+++ GE
Sbjct: 65 AAHYQEIPTDLIDPNPKNPRKVFDNFDLDELVHSIKEFGLLQPIVVRRSGDR-YELVMGE 123
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAA A + +P I+R D+ S L A++ENV R LNPLEEA YEQL+ E+G TQ
Sbjct: 124 RRWRAATQAGVDTIPAIVRKTDDDSMLRDALLENVHRVQLNPLEEAAAYEQLLEEFGVTQ 183
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV----STSDPLSLAQV 211
+++ +G+SR V N+LR+LKLP +V++ + +S GHAR L+ LA
Sbjct: 184 SELADKLGRSRPVVTNMLRLLKLPVAVQQKVAAGVLSAGHARALLAINEDQEGQERLANR 243
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN 271
IVS+ +SVR TEE V + + + + E YLT + ++ + +S+
Sbjct: 244 IVSEGLSVRATEEAVVLLSHGETGPVRKRAKAPMPE-YLTTAAESLADNLDTKVSVSMGK 302
Query: 272 NKGQFCIKYETNEQLKIICSLLGEND 297
+KG+ +++ + + I LL ++
Sbjct: 303 HKGRIVVEFGGKDDFERIMGLLSGDE 328
>gi|332882433|ref|ZP_08450058.1| putative stage 0 sporulation protein J [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332679603|gb|EGJ52575.1| putative stage 0 sporulation protein J [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 297
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 90/289 (31%), Positives = 153/289 (52%), Gaps = 15/289 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI D + + I + I PNP+ PR F+
Sbjct: 1 MAVHKKYPALGRGLDALISTKEVHTD--------GSSTINEIELDKISPNPNQPRRDFDP 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L SI GI+QP+ +R +++ ++IIAGERR+RA+K A L +P IR D+++
Sbjct: 53 ESLRELADSIAEIGIVQPITLRKMEDDTFQIIAGERRWRASKQAGLHTIPAYIRTADDEN 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ LI +Y TQ + +GK+RS + N LR+L+LP+
Sbjct: 113 VMEMALIENIQREDLNSVEIALAYQHLIEQYNLTQEKLSERIGKNRSTITNYLRLLRLPA 172
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS------KKMSVRDTEELVQEQDNKKE 234
++ ++ ++I +GHAR L++ +P ++ V + + + E ++ K
Sbjct: 173 PIQMALQNKDIDMGHARALLALDNPTLQIKLFQQIIQENLSVRKVEEMVKALTEGESVKS 232
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYET 282
KKI + L++ +S + + KG+ I +
Sbjct: 233 GGKKITPKGARLPEEYNVLKQSLSKFFQAKVQLTCSDKGKGKISIPFAN 281
>gi|194016414|ref|ZP_03055028.1| stage 0 sporulation protein J [Bacillus pumilus ATCC 7061]
gi|194011887|gb|EDW21455.1| stage 0 sporulation protein J [Bacillus pumilus ATCC 7061]
Length = 284
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 110/290 (37%), Positives = 170/290 (58%), Gaps = 17/290 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL V+ + E+ + I I + PNP+ PR F+ + L DL
Sbjct: 3 KGLGKGINALFNTVDSN-----------EETVEEIKIKDLRPNPYQPRKTFDEDALSDLK 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI+ HG++QP+IVR Y I+AGERRFRAA+ A L+ +P I+R EIA++
Sbjct: 52 ESIQQHGVLQPIIVRK-SIKGYDIVAGERRFRAAQQAGLTTIPAIVREFSETLMREIALL 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y L+ TQ ++ +GKSR H+AN LR+L LP V+++I
Sbjct: 111 ENLQREDLSPLEEAEAYASLLDHLSVTQEELAKRLGKSRPHIANHLRLLTLPDEVQKLIA 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQ---VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++S+GH RTL+S + LA IV + ++VR E+LVQ+ + + K E
Sbjct: 171 DGKLSMGHGRTLLSLKNKNKLAPLVKKIVDEGLNVRQVEKLVQQLNENVPRETKKKEAP- 229
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
K++ L + E + + G ++SIK + KG+ I++ +NE L+ I LL
Sbjct: 230 -KDRVLKERESFLQNYFGTSVSIKKQKKKGKIEIEFLSNEDLERILELLS 278
>gi|225575635|ref|ZP_03784245.1| hypothetical protein RUMHYD_03728 [Blautia hydrogenotrophica DSM
10507]
gi|225037145|gb|EEG47391.1| hypothetical protein RUMHYD_03728 [Blautia hydrogenotrophica DSM
10507]
Length = 312
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 107/313 (34%), Positives = 181/313 (57%), Gaps = 27/313 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTET-----------------IPESQDCIS 43
M+ KR LGRGL +I + + +T +P + +
Sbjct: 1 MAM---KRGLGRGLDVMIPDNHTGTTKKSSRTTKTIVSMEQESEKNVRDYVVPTGEVKVK 57
Query: 44 IHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKM 103
I + PN PR F+ + L +L +SIK +G++QPL+V + Y+IIAGERR+RAAK+
Sbjct: 58 ISKVEPNREQPRKQFDEDSLLELSESIKQYGVLQPLVV-SDKKDYYEIIAGERRWRAAKL 116
Query: 104 ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVG 163
A L EVPVII+ + + ++EI+++EN+QR+DLNP+EEA+ +++L+ E+ Q+++ V
Sbjct: 117 AGLKEVPVIIKELSKQETVEISLIENIQREDLNPIEEAMAFKRLLDEFHLKQDEVADRVS 176
Query: 164 KSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVR 220
KSR+ V N++R+LKL S V++M+ E I+ GHAR + + +A + +K+SVR
Sbjct: 177 KSRTAVTNVMRLLKLESEVQQMLIDEMITAGHARALLGISDRELQIKIANKVFDEKLSVR 236
Query: 221 DTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIK 279
+TE+LV+ K++K + ++ LE+K+ +G + I +NNKG+ I+
Sbjct: 237 ETEKLVKSILE--SKKEKPMKKDTAEDAIYESLEEKMKGIMGTKVIINRKKNNKGKIEIE 294
Query: 280 YETNEQLKIICSL 292
Y + ++L+ I L
Sbjct: 295 YYSRDELERIIEL 307
>gi|330998237|ref|ZP_08322063.1| putative stage 0 sporulation protein J [Paraprevotella xylaniphila
YIT 11841]
gi|329568929|gb|EGG50727.1| putative stage 0 sporulation protein J [Paraprevotella xylaniphila
YIT 11841]
Length = 297
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 90/289 (31%), Positives = 153/289 (52%), Gaps = 15/289 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI D + + I + I PNP+ PR F+
Sbjct: 1 MAVHKKYPALGRGLDALISTKEVHTD--------GSSTINEIELDKISPNPNQPRRDFDP 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L SI GI+QP+ +R +++ ++IIAGERR+RA+K A L +P IR D+++
Sbjct: 53 ESLRELAASIAEIGIVQPITLRKMEDDTFQIIAGERRWRASKQAGLHTIPAYIRTADDEN 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y+ LI +Y TQ + +GK+RS + N LR+L+LP+
Sbjct: 113 VMEMALIENIQREDLNSVEIALAYQHLIEQYSLTQEKLSERIGKNRSTITNYLRLLRLPA 172
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS------KKMSVRDTEELVQEQDNKKE 234
++ ++ ++I +GHAR L++ +P ++ V + + + E ++ K
Sbjct: 173 PIQMALQNKDIDMGHARALLALDNPTLQIKLFQQIIQENLSVRKVEEMVKALTEGESVKS 232
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYET 282
KKI + L++ +S + + KG+ I +
Sbjct: 233 GGKKIIPKGARLPEEYNVLKQSLSKFFQAKVQLTCSDKGKGKISIPFAN 281
>gi|121635599|ref|YP_975844.1| putative chromosome segregation proteins [Neisseria meningitidis
FAM18]
gi|254804242|ref|YP_003082463.1| chromosome partitioning protein [Neisseria meningitidis alpha14]
gi|120867305|emb|CAM11076.1| putative chromosome segregation proteins [Neisseria meningitidis
FAM18]
gi|254667784|emb|CBA03737.1| chromosome partitioning protein [Neisseria meningitidis alpha14]
gi|254674265|emb|CBA10049.1| chromosome partitioning protein [Neisseria meningitidis alpha275]
gi|325199034|gb|ADY94490.1| putative chromosome partitioning protein parB [Neisseria
meningitidis G2136]
Length = 286
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A L+E+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQAALQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E I LG
Sbjct: 225 RPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGKIILHFDTLETFDHILKQLG 281
>gi|254447673|ref|ZP_05061139.1| chromosome partitioning protein [gamma proteobacterium HTCC5015]
gi|198263016|gb|EDY87295.1| chromosome partitioning protein [gamma proteobacterium HTCC5015]
Length = 285
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 88/287 (30%), Positives = 169/287 (58%), Gaps = 8/287 (2%)
Query: 14 LAALIGEVNQSIDSPEKKT---ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
+ L+ + P+ + E + + + I + PR +F E LE+L SI
Sbjct: 1 MDELLKGSRAAKSKPDGEPVIDEAAGDQLKTLPVDKIDRGTYQPRRHFAQEALEELADSI 60
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+ G++QP++VR + Y+IIAGERR+RA ++A L ++P +++ +D++++ A++EN+
Sbjct: 61 REQGVLQPIVVRPVGAR-YEIIAGERRWRATQLAGLQDIPAVVKRLDDQAAAAAALIENI 119
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
QR++LNPLEEA ++LI E+ T +++ VG++R+ V N+LR+L+L V+ + +
Sbjct: 120 QRENLNPLEEAHALQRLIDEFELTHSEVSQAVGRARASVTNLLRLLELADEVKSQVDQGL 179
Query: 191 ISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
+S+GHAR L +S+ +A+ V KK SVR TE+ V++ + + KK G + +
Sbjct: 180 LSMGHARALLSLSSVQQQQVAREAVRKKWSVRATEQRVKQLLS-GDSGKKEDAGKNKTDP 238
Query: 249 YLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
+ LE+ ++ + ++S++H+ KG+ I+Y + ++L+ I +
Sbjct: 239 NIRRLEQDLADTLSASVSLQHQQSGKGKLTIQYNSLDELEGILKHIK 285
>gi|331092101|ref|ZP_08340932.1| hypothetical protein HMPREF9477_01575 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402302|gb|EGG81873.1| hypothetical protein HMPREF9477_01575 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 296
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 101/292 (34%), Positives = 165/292 (56%), Gaps = 5/292 (1%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+ LG+GL +LI E ++ EK + + I + I PN PR FE +
Sbjct: 1 MAVKRGGLGKGLDSLIPEKKETKTKQEKPAKA---GEQMIKLSLIEPNREQPRRMFEEDS 57
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L +L SIK +G++QPL+V+ D Y+IIAGERR+RAAK+A + EVPVI+R + +
Sbjct: 58 LLELADSIKQYGVLQPLLVQKKD-DFYEIIAGERRWRAAKLAGIKEVPVIVRKYTEQEMV 116
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
EIA++EN+QR++LNP+EEA+ +++L++E+ Q+++ V KSR+ V N +R+LKL V
Sbjct: 117 EIALIENIQRENLNPIEEAMAFKRLLTEFSLKQDEVAERVSKSRTAVTNSMRLLKLNEKV 176
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++MI + IS GHAR L++ D + E + K +K+ +
Sbjct: 177 QQMIIDDMISTGHARALLAIDDEEQQYILANKIFDEKLSVRETEKLIKELKNPKKEKKKK 236
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
E + D E+++ S +G +SI + N KG+ I+Y + + + I L+
Sbjct: 237 IVENDFIYRDSEERMKSLMGTKVSINQKANGKGKIEIEYYSEKDFERIYDLI 288
>gi|108762132|ref|YP_635579.1| ParB family protein [Myxococcus xanthus DK 1622]
gi|108466012|gb|ABF91197.1| ParB family protein [Myxococcus xanthus DK 1622]
Length = 296
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 108/287 (37%), Positives = 171/287 (59%), Gaps = 10/287 (3%)
Query: 1 MSN-NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M + KR LGRGL+ALI + + K + + I SI + PR YF+
Sbjct: 1 MVKADMQKRALGRGLSALIPQAGAT--GAGKGEQAPKAGVLKLPIESIHRDKDQPRTYFD 58
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L++L +SIK+ G++QP++VR D Y+IIAGERR+RA++ A L EVP I+R+V
Sbjct: 59 EEKLKELSESIKAQGVLQPILVRK-DGDGYRIIAGERRWRASQAAGLKEVPAIVRDVTEV 117
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+ E+A+VEN+QR DLNP+EEA GY++L+ E+ TQ + VGK RS VAN LR+L LP
Sbjct: 118 QAFELALVENLQRADLNPIEEAEGYKRLVDEFKLTQEQVSVRVGKERSTVANALRLLALP 177
Query: 180 SSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+ V+ M+ +S+GHAR + + +LA+ + KK+SVRDTE LVQ ++ +
Sbjct: 178 TDVKGMVADGSLSMGHARALLGVPRLPELQNLAKQVADKKLSVRDTERLVQ--QSRSSGK 235
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYET 282
K + + ++ + L +++ ++G + + R+ KG + + +
Sbjct: 236 KDAGKAAPKQSPQVKALVEELQRRLGTKVRLTERSPGKGTIEVDFFS 282
>gi|145297088|ref|YP_001139909.1| hypothetical protein cgR_2984 [Corynebacterium glutamicum R]
gi|21325867|dbj|BAC00488.1| Predicted transcriptional regulators [Corynebacterium glutamicum
ATCC 13032]
gi|140847008|dbj|BAF56007.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 384
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 87/279 (31%), Positives = 151/279 (54%), Gaps = 5/279 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
++ + + S I I I PNP PR+ F+ + L++L SI G++QP
Sbjct: 104 SAQQEAPQAQPAQQSEFGASYLEIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGLMQP 163
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++G Y++I GERR+RA+K A L +P I+R ++ + L A++EN+ R LNPL
Sbjct: 164 IVVRRSEDG-YELIMGERRWRASKRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPL 222
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ E+G TQ ++ +G+SR + N++R+L LP +V+ + +S GHAR
Sbjct: 223 EEAAAYQQLLEEFGVTQAELADKLGRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARA 282
Query: 199 L----VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
L +LA I+++ +SVR TEELV + + +K + T
Sbjct: 283 LLGLKAGEDAQDTLATRIIAEGLSVRATEELVLLHNRGDQDEEKKPREKAATPEVFTRAA 342
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++ + +S+ KG+ +++ + + I SL+
Sbjct: 343 ESLADNLDTKVSVMMGKKKGKLVVEFGDKDDFERIMSLI 381
>gi|19554284|ref|NP_602286.1| putative cell division protein ParB [Corynebacterium glutamicum
ATCC 13032]
gi|62391941|ref|YP_227343.1| transcriptional regulator involved in chromosome patitioning
[Corynebacterium glutamicum ATCC 13032]
gi|41223088|emb|CAF19033.1| Predicted transcriptional regulator involved in chromosome
patitioning [Corynebacterium glutamicum ATCC 13032]
Length = 379
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 87/279 (31%), Positives = 151/279 (54%), Gaps = 5/279 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
++ + + S I I I PNP PR+ F+ + L++L SI G++QP
Sbjct: 99 SAQQEAPQAQPAQQSEFGASYLEIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGLMQP 158
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++G Y++I GERR+RA+K A L +P I+R ++ + L A++EN+ R LNPL
Sbjct: 159 IVVRRSEDG-YELIMGERRWRASKRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPL 217
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ E+G TQ ++ +G+SR + N++R+L LP +V+ + +S GHAR
Sbjct: 218 EEAAAYQQLLEEFGVTQAELADKLGRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARA 277
Query: 199 L----VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
L +LA I+++ +SVR TEELV + + +K + T
Sbjct: 278 LLGLKAGEDAQDTLATRIIAEGLSVRATEELVLLHNRGDQDEEKKPREKAATPEVFTRAA 337
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++ + +S+ KG+ +++ + + I SL+
Sbjct: 338 ESLADNLDTKVSVMMGKKKGKLVVEFGDKDDFERIMSLI 376
>gi|154493970|ref|ZP_02033290.1| hypothetical protein PARMER_03315 [Parabacteroides merdae ATCC
43184]
gi|154086230|gb|EDN85275.1| hypothetical protein PARMER_03315 [Parabacteroides merdae ATCC
43184]
Length = 295
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 165/299 (55%), Gaps = 16/299 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL ALI + +E I PNP PR+ FE E LE
Sbjct: 3 MKRSALGRGLDALITMDDLKTGGSSSISEIELS--------KIQPNPDQPRSVFEEETLE 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+S G+IQP+ ++ Y II+GERR+RA+ MA L +P I+ +++ +E+
Sbjct: 55 ELAVSIRSLGVIQPITLKETGTDKYMIISGERRYRASLMAGLERIPAYIKTAADENVVEM 114
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +E AL Y++LI YG TQ + VGK R+ +AN LR+LKLP+ ++
Sbjct: 115 ALIENIQREDLNSIEIALAYQKLIDSYGLTQEKLSERVGKKRATIANYLRLLKLPAEIQV 174
Query: 185 MIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ ++I +GHAR L+ DP + I++ +SVR+ EE+V+ + + E
Sbjct: 175 GLKDKKIDMGHARALLPVEDPEVQLALYEQILADGLSVRNVEEIVRGGVDAAALEQARKE 234
Query: 242 GSREKEKYLTD----LEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+++ L + L+ +SS + + + KG+ I + + ++L+ + LL +
Sbjct: 235 KPAQRKPKLPEEFNLLKDHLSSFFNTKVQLVCNEKGKGKITIPFASEDELEKLIGLLDK 293
>gi|167770821|ref|ZP_02442874.1| hypothetical protein ANACOL_02174 [Anaerotruncus colihominis DSM
17241]
gi|167666861|gb|EDS10991.1| hypothetical protein ANACOL_02174 [Anaerotruncus colihominis DSM
17241]
Length = 289
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 102/298 (34%), Positives = 173/298 (58%), Gaps = 21/298 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +K LG+GL AL + + + +++ I PN PR +F+
Sbjct: 1 MAK--AKGGLGKGLEALFADNSTDS-----------GAVSSLAVSEIEPNRGQPRRHFDE 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L SI+ +G++QPL+VR +++G Y+++AGERR+RAA+MA LS+VPV+IR + +
Sbjct: 48 AALAELADSIRQYGVLQPLVVRPMESGGYQLVAGERRWRAARMAGLSQVPVVIRELSDSE 107
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++E+A++EN+QR+DLNP+EEA GY +L+ +G TQ + VGKSR + N +R+L LP
Sbjct: 108 TMELALIENLQREDLNPIEEAAGYRELMETFGLTQEQVSERVGKSRPVITNAMRLLGLPD 167
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+VR ++ + E+S GHAR L+ + + A+ I+ K SVR TE V+ Q ++ +
Sbjct: 168 AVRALVSQGELSAGHARALLGLENEAVICALAEEIIKKGWSVRQTEAFVKRQKQAEKAEE 227
Query: 238 KIFEGSREKEKYLT---DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
+ + + + L + +S KV + K KG+ I++ + LK + +L
Sbjct: 228 EAPRTAWDNSTFAEVQLALMQSLSRKV--RVECKKGEKKGRLVIEFYDEQDLKGLAAL 283
>gi|253681230|ref|ZP_04862028.1| stage 0 sporulation protein J [Clostridium botulinum D str. 1873]
gi|253562468|gb|EES91919.1| stage 0 sporulation protein J [Clostridium botulinum D str. 1873]
Length = 283
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 108/292 (36%), Positives = 167/292 (57%), Gaps = 16/292 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG+GL ALI E + ES + ++ I PN PR F+ E +
Sbjct: 4 KKFGLGKGLGALIPEEDIENS----------ESVLKVKMNLIKPNSDQPRKNFDEEKILQ 53
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK HGIIQPLI++ N LY IIAGERR+RAAK L E+P ++ + NK LE++
Sbjct: 54 LAESIKEHGIIQPLILQK-SNELYTIIAGERRWRAAKKVGLQELPAVVVELSNKEILEVS 112
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEAL Y++LI E+ TQ+ +G +GKSR+ + N +R+L L +E
Sbjct: 113 LIENIQREDLNPIEEALAYKKLIDEFNLTQDALGKRIGKSRTAITNCMRLLNLDIRTQEY 172
Query: 186 IRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ IS GH R L+S D +AQ I+ K++SVR TE L++ + +++
Sbjct: 173 LIDGVISEGHGRVLLSIEDKELQYKIAQEIIDKQLSVRQTEILIKNLKKGGKTKEEKKLD 232
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + Y D+ K+ + + + + N+G+ I+Y + E L+ I +L
Sbjct: 233 NIK--PYYNDIINKLQNLFNTKVVLSSKGNRGKIQIEYYSEEDLQRIIDVLN 282
>gi|315178653|gb|ADT85567.1| ParB family protein [Vibrio furnissii NCTC 11218]
Length = 293
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 92/296 (31%), Positives = 175/296 (59%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSID----SPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + + + + + I ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLSTSSLAREKQHVASQSQAMSSEGELTDLVITNLKPGMYQPRKDMSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAA+ A L +VP +++ VD+++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRPLALGGYEIIAGERRWRAARQAGLKQVPCLVKRVDDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQDEFKLTHQQVADVIGKSRATVSNLLRLNQLDD 180
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
SV+ ++ ++ +GHAR ++ + +A + K+++VR TE+LV++ ++ K
Sbjct: 181 SVKRLVETRQLEMGHARALLMLDGEQQIEVAARVAKKQLTVRQTEQLVKKCLSEHSDVKN 240
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+ E + + + + +S K+G +SI + ++ K + I + + + + + L
Sbjct: 241 VPE-----DVEIQQMSQNLSEKLGAKVSIVRSKSGKSKVTISLDEPHKFEQLIAKL 291
>gi|156335497|ref|XP_001619602.1| hypothetical protein NEMVEDRAFT_v1g224027 [Nematostella vectensis]
gi|156203120|gb|EDO27502.1| predicted protein [Nematostella vectensis]
Length = 349
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 93/275 (33%), Positives = 148/275 (53%), Gaps = 2/275 (0%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDS-PEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K+ LGRGL+AL+ + I S +K E + S + + +I NP PR+ F
Sbjct: 1 MAKAVKKQALGRGLSALLKDPTNDIKSVEDKGAEKVVGSIIELELDAIEINPFQPRSNFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L++L SIK G+IQP+ VR ++ +++I+GERR RA+K+A L +P IR ++
Sbjct: 61 EETLKELATSIKELGVIQPITVRKLEFNKFQLISGERRLRASKLAGLETIPAYIRIANDN 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SL +A+VEN+QR DL+P+E A+ Y++LI E TQ ++ VGK RS + N LR+LKL
Sbjct: 121 ESLVMALVENIQRHDLDPIEVAMSYQRLIDEINLTQEELSDRVGKKRSTITNYLRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++ +R IS+GH R L+S D + + E ++ K
Sbjct: 181 PIIQTGMRDGFISMGHGRALISIEDQDVQSDIYHKVVTLSLSVRETEALVKKYQDSLKPS 240
Query: 240 FEGSREKEKYLTDLEKK-ISSKVGLNISIKHRNNK 273
++ + ++EKK +S G + +K N
Sbjct: 241 TVKXKDSSFDIDEIEKKAFTSFFGTKVDVKVATNG 275
>gi|302520505|ref|ZP_07272847.1| ParB [Streptomyces sp. SPB78]
gi|302429400|gb|EFL01216.1| ParB [Streptomyces sp. SPB78]
Length = 371
Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 95/345 (27%), Positives = 163/345 (47%), Gaps = 54/345 (15%)
Query: 7 KRRLGRGLAALIG---------------------------------------------EV 21
+R LGRGL ALI +V
Sbjct: 5 RRGLGRGLQALIPTAASAEKAAAATATRSDGPRVPAAGGPVLGERGVAAAKLTTPVESDV 64
Query: 22 NQSIDSPEKKTETIPESQ----DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
++ E++ P + + + I+PN PR F+ + L +L SIK G++Q
Sbjct: 65 SRETSVSEQRGGLPPAPEGAFFAELPLDQIIPNRDQPRAIFDEDALRELIDSIKEVGLLQ 124
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P++VR +D +++I GERR RA+K A L+ +P I+R ++ L A++EN+ R L P
Sbjct: 125 PVVVRQLDEKQFELIMGERRMRASKEAGLTTIPAIVRATEDDRLLLDALLENLHRSQLTP 184
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA YEQL+ ++ T ++ VG+SR V N LR+LKL SV++ + +S GHAR
Sbjct: 185 LEEAHAYEQLLKDFNCTHEELAKRVGRSRPQVTNTLRLLKLSPSVQKKVDAGVLSAGHAR 244
Query: 198 TLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS--REKEKYLTD 252
L+ +++ LA+ I+ + +SVR EE+ + K + L++
Sbjct: 245 ELLSVEDSTEQDKLAERIIREGLSVRAVEEITHLMRSHPGPAKSTPKPRAGSVTSPALSE 304
Query: 253 LEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
L ++S + + + KG+ +++ + + L+ I S L ++
Sbjct: 305 LAGRLSDRFETRVKVDLGQKKGKIVVEFASVDDLQRILSQLAPDE 349
>gi|325141505|gb|EGC63976.1| putative chromosome partitioning protein parB [Neisseria
meningitidis 961-5945]
Length = 286
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A L+E+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPG 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQAAFQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E I LG
Sbjct: 225 RPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGKIILHFDTPETFDHILKQLG 281
>gi|190571362|ref|YP_001975720.1| Chromosome partitioning protein, ParB family [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213018760|ref|ZP_03334568.1| Chromosome partitioning protein, ParB family [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|190357634|emb|CAQ55076.1| Chromosome partitioning protein, ParB family [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212995711|gb|EEB56351.1| Chromosome partitioning protein, ParB family [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 288
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 115/295 (38%), Positives = 185/295 (62%), Gaps = 21/295 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +N RRLGRGLA LIG+ +D + I + P+ PR YF+
Sbjct: 1 MKDN---RRLGRGLAGLIGD-------------NYGNKEDRLPISLLHPSKFQPRKYFDE 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII-AGERRFRAAKMASLSEVPVIIRNVDNK 119
E L++L SI+ +GIIQP++VR + I AGERR+RA+K+ +L VPVII+++++K
Sbjct: 45 ESLKELAGSIEKNGIIQPVVVRKDPSNEGYEIVAGERRWRASKVINLDSVPVIIKDLNDK 104
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE++I+EN+QR+D+NP+EE Y +LI E+ YT ++ +GKSRSH+ N++R+L LP
Sbjct: 105 ECLEVSIIENIQRQDINPIEEGEAYRKLIDEFSYTHEELALTLGKSRSHITNMIRMLSLP 164
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ V+ MI ++++S+GHAR L++ + S+A+ IVS+ +SVR TE+L+++ ++
Sbjct: 165 NGVKTMINEKKLSMGHARALINVENAESIAERIVSQGLSVRRTEKLIKDLQQNNDR---- 220
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E K + + LE ISS++GL + I N+KG+ I+Y + +L I +L
Sbjct: 221 KEHKFTKNQDMAVLEGAISSQLGLKVKINDSNSKGKVMIRYNNSNELDFILKILN 275
>gi|227549430|ref|ZP_03979479.1| stage 0 DNA-binding protein [Corynebacterium lipophiloflavum DSM
44291]
gi|227078507|gb|EEI16470.1| stage 0 DNA-binding protein [Corynebacterium lipophiloflavum DSM
44291]
Length = 364
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 89/282 (31%), Positives = 149/282 (52%), Gaps = 7/282 (2%)
Query: 18 IGEVNQSIDSPEKKTETIP--ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
I + E+ + I I + I PNP PR F+ + L +L SIK G+
Sbjct: 81 IPGAPTVVPQAERPKQPIGMGARYQEIPVGEIFPNPKQPRQVFDEDELAELVHSIKEFGL 140
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
+QP++VR D G +++I GERR+RA+ A L +P I+R ++ L A++EN+ R L
Sbjct: 141 LQPIVVRESDEG-FELIMGERRWRASSKAGLKHIPAIVRETNDADMLRDALLENIHRVQL 199
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
NPLEEA Y+QL+ E+G TQ + +G+SR + N +R+L LP +V+ + +S GH
Sbjct: 200 NPLEEAAAYQQLLEEFGVTQEQLADRLGRSRPRITNSIRLLNLPVAVQRRVAAGVLSAGH 259
Query: 196 ARTL----VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
AR L V LA +V++ +SVR TEE V + +K + ++L+
Sbjct: 260 ARALLGVKVGAEQQEKLADRVVAEGLSVRATEEAVTLLNKHGAAAEKPKREPAPQPEFLS 319
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++++ + +S+ KG+ +++ + L+ I SL+
Sbjct: 320 HAAERLADEWDTKVSVTMGKRKGKIVVEFGDRDDLERILSLI 361
Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCI 42
M+ K LGRGLAALI +S D K + D I
Sbjct: 6 MAQ-ERKGGLGRGLAALIPSSTESADKTGKTGRLGDGAADVI 46
>gi|288800832|ref|ZP_06406289.1| spoOJ protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288332293|gb|EFC70774.1| spoOJ protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 302
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 167/303 (55%), Gaps = 19/303 (6%)
Query: 4 NYSKRR--LGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
N S + LGRGL ALI S ++ + + + + I NP+ PR F+ E
Sbjct: 8 NSSNKGFALGRGLDALI--------STDEVKPQGSSTINEVLLSEIEANPNQPRREFDQE 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L++L SIK GIIQP+ + + Y+IIAGERR+RA+++A L+ +P IR + + S
Sbjct: 60 ALQELANSIKEIGIIQPITLHQVTENKYQIIAGERRWRASQLAGLTAIPAYIRTIKDASV 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR+DLN +E AL YEQL+S+ G TQ + VGKSR+ V N +R+L+LP+
Sbjct: 120 MEMALVENIQREDLNAIEIALAYEQLVSQSGMTQEKVAERVGKSRTAVTNYMRLLRLPAQ 179
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQD--NKKEKR 236
V+ ++K+ I +GHAR L+S P I SVR EELVQ+ N +
Sbjct: 180 VQMALQKKSIDMGHARALLSIDSPSQQIKLFNEIQKNGYSVRKVEELVQDIKSGNSFVEA 239
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIIC---SL 292
KK + + + L++++S + + + + KG+ I + +L+ I
Sbjct: 240 KKKVKKTTALPEEFNVLKQQLSKFLNTKVQMNYSAKGKGKISIPFANAAELEHIMQVFDK 299
Query: 293 LGE 295
L +
Sbjct: 300 LKD 302
>gi|157694469|ref|YP_001488931.1| stage 0 DNA-binding protein [Bacillus pumilus SAFR-032]
gi|157683227|gb|ABV64371.1| stage 0 DNA-binding protein [Bacillus pumilus SAFR-032]
Length = 286
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 110/290 (37%), Positives = 169/290 (58%), Gaps = 17/290 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL V+ + E+ + I I + PNP+ PR F+ + L DL
Sbjct: 5 KGLGKGINALFNTVDSN-----------EETVEEIKIKDLRPNPYQPRKTFDEDALSDLK 53
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI+ HG++QP+IVR Y I+AGERRFRAA+ A L+ +P I+R EIA++
Sbjct: 54 ESIQQHGVLQPIIVRK-SIKGYDIVAGERRFRAAQQAGLTTIPAIVREFSETLMREIALL 112
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y L+ TQ ++ +GKSR H+AN LR+L LP V+++I
Sbjct: 113 ENLQREDLSPLEEAEAYASLLDHLSVTQEELAKRLGKSRPHIANHLRLLTLPDEVQKLIA 172
Query: 188 KEEISLGHARTLVSTSDPLSLAQ---VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+S+GH RTL+S + LA IV + ++VR E+LVQ+ + + K E
Sbjct: 173 DGTLSMGHGRTLLSLKNKNKLAPLVKKIVDEGLNVRQVEKLVQQLNENVPRETKKKEAP- 231
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
K++ L + E + + G ++SIK + KG+ I++ +NE L+ I LL
Sbjct: 232 -KDRVLKERESFLQNYFGTSVSIKKQKKKGKIEIEFLSNEDLERILELLS 280
>gi|33594728|ref|NP_882371.1| chromosome partitioning protein ParB [Bordetella parapertussis
12822]
gi|33598998|ref|NP_886558.1| chromosome partitioning protein ParB [Bordetella bronchiseptica
RB50]
gi|33564804|emb|CAE39746.1| probable chromosome partitioning protein ParB [Bordetella
parapertussis]
gi|33575044|emb|CAE30507.1| probable chromosome partitioning protein ParB [Bordetella
bronchiseptica RB50]
Length = 305
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 101/299 (33%), Positives = 169/299 (56%), Gaps = 10/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIG-EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K LGRGL AL+G +V + + + + + + PR +
Sbjct: 1 MATKKPK-GLGRGLDALLGADVPAIDNIGKAPAAAPEGPPATLPVSKMRAGKYQPRTRMD 59
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAID---NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
L +L +SI++ GI+QP++VRA+ G Y+IIAGERRFRAA++A L EVPV++R V
Sbjct: 60 EGALNELAESIRTQGIMQPILVRALGADAPGQYEIIAGERRFRAAQLAGLKEVPVLVREV 119
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++++ +A++EN+QR+DLNPLEEA G +L+ E+G T +G+SRS +N+LR+L
Sbjct: 120 ADENAAVMALIENIQREDLNPLEEAHGVRRLLDEFGLTHEQAAQAIGRSRSATSNLLRLL 179
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L + V+ M+ ++ +GHAR L V + + LA +++K++SVR+ E+LV +
Sbjct: 180 NLAAPVQTMLLAGDVDMGHARALLAVDAATQIQLANQVIAKRLSVREAEKLVARAQKDVD 239
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
+ ++ +T LE+ +S +G +++K KGQ I + E L +
Sbjct: 240 AAPRKKGNGASRD--VTRLEEALSDHLGTRVALKVGAREKGQIVIDFHGWEHLNSLLER 296
>gi|297581982|ref|ZP_06943902.1| ParB family protein [Vibrio cholerae RC385]
gi|297533849|gb|EFH72690.1| ParB family protein [Vibrio cholerae RC385]
Length = 293
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 174/298 (58%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + ++ ++ +SI ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSVEGELADLSISNLKPGIYQPRKDLSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAAK A L +VP +I+ V+++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRHLPTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRG 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNAMEEAQALERLQNEFNLTHQQVAEVIGKSRTTVTNLLRLNQLSD 180
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR ++ + +AQ + K+++VR TE+LV++
Sbjct: 181 DVKRLLETKQLEMGHARALLMLEGEQQVEIAQQVAKKQLTVRQTEQLVKK-----CLSDP 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ + L + +S K+ +SI + N K + I + +L+++ + L
Sbjct: 236 SDAKNVSEDLEIQQLSQNLSEKLAAKVSIVRTPNGKSKVTISLDEPHKLELLIAKLQN 293
>gi|189485056|ref|YP_001955997.1| ParB-like chromosome partitioning protein [uncultured Termite group
1 bacterium phylotype Rs-D17]
gi|170287015|dbj|BAG13536.1| ParB-like chromosome partitioning protein [uncultured Termite group
1 bacterium phylotype Rs-D17]
Length = 286
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 98/292 (33%), Positives = 167/292 (57%), Gaps = 11/292 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K+ LGRGL +LI + + S ++ I + I N PRN F+ L+
Sbjct: 1 MQKKALGRGLESLIPALAANKASTDEIIIII-------PLDKIKSNRFQPRNKFDEVKLQ 53
Query: 65 DLCQSIKSHGIIQPLIVR-AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSL 122
+L +SI+ HG+ QP++V +I G Y+IIAGERR+RA+K+A ++ I++ D+K
Sbjct: 54 ELARSIEKHGLAQPILVAASIVPGEYEIIAGERRYRASKLAGNKDIKAIVKQSADDKQRF 113
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
++A+VEN+QR++L+P+EEA +++LI E+G+T I IVGK RS ++N LR+L LP V
Sbjct: 114 DLALVENIQRENLDPIEEARAFKRLIEEFGHTHEQISDIVGKERSVISNALRLLSLPEDV 173
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ +I +++IS GH + L D + + ++ + E+ + K +K +G
Sbjct: 174 QLLITEDKISPGHGKILAGIEDKNRI--RAIVDRILNENLSVRAVEKIISELKPEKESDG 231
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+++E L +L+++I K+G ++I KG+ I Y + E L+ I L
Sbjct: 232 QKKQEIELINLKEEIQRKLGTKVNISGTGKKGRIEIYYYSLEDLERITKELK 283
>gi|301062063|ref|ZP_07202765.1| ParB-like protein [delta proteobacterium NaphS2]
gi|300443829|gb|EFK07892.1| ParB-like protein [delta proteobacterium NaphS2]
Length = 281
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 91/289 (31%), Positives = 164/289 (56%), Gaps = 10/289 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++ LG+GL+ALI + + + E + +I PNP+ PR F + LE
Sbjct: 2 TKRKALGKGLSALIPDGHGLDEKEE--------QFFLCPVAAIEPNPNQPRQRFPALELE 53
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
++ S++ GI+ PL+V +G Y++IAGERR+RAA+MA L VPV++++V SLE+
Sbjct: 54 EMAVSVREKGILTPLLVNKTGDG-YQLIAGERRWRAAQMAGLERVPVVVKDVTPSESLEL 112
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QRKDLNP+EEA+ ++L+ + TQ + +GK RS +AN+LR+L LP ++++
Sbjct: 113 ALIENIQRKDLNPIEEAMACQKLMEDTACTQEMLSRRLGKDRSTIANLLRLLNLPKAIQQ 172
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ + +S+GHAR L S+ +++ + + + K +K K +
Sbjct: 173 DVIENRLSMGHARLLAGISEKDQQ-RLLRDAIIKRGLSVRQAEALARKLKKVPKPKKVLS 231
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+++ Y+ L + + +G + IK +GQ + + ++E+L + L
Sbjct: 232 KEDPYIHSLSENLKRSLGTKVEIKKEGKRGQILLYFYSDEELDRLVEFL 280
>gi|95929977|ref|ZP_01312717.1| parB-like partition proteins [Desulfuromonas acetoxidans DSM 684]
gi|95133946|gb|EAT15605.1| parB-like partition proteins [Desulfuromonas acetoxidans DSM 684]
Length = 283
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 107/297 (36%), Positives = 164/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LG+G+ AL+ T I + P+ PR F
Sbjct: 1 MA---KRPALGKGMGALLS----------AATPASNGKYFLCGIEDLKPHHSQPRKTFND 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E +E+L SIK G+IQPL+VR +D Y+IIAGERR+RAA+ A L+EVPV I++V
Sbjct: 48 EKMEELVASIKEKGVIQPLVVRRVD-DFYQIIAGERRWRAAQKAGLTEVPVTIQDVSEDW 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIA++EN+QR+DLN +EEA Y+ LI + Q+D+ VGKSRS V N LR+L+LP
Sbjct: 107 ALEIALIENIQREDLNAIEEAEAYKHLIENFDLAQDDVAKRVGKSRSAVTNSLRLLRLPE 166
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++R+ + ++++S+GHAR L+S + +V K +SVR TE LV++ +
Sbjct: 167 AIRQDVLEQKLSMGHARCLLSLESDEDMVEARDQVVKKGLSVRATESLVKKIKTVIAPSE 226
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
K E + + L LE + +G + IK + G+ I + N +L+ I +
Sbjct: 227 K--EKQVKIDPELNHLEDILKKNLGTQVKIKTKGKGGRIEISFYDNTELQRILDYMN 281
>gi|15642765|ref|NP_232398.1| ParB family protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591527|ref|ZP_01678790.1| ParB family protein [Vibrio cholerae 2740-80]
gi|147675136|ref|YP_001218413.1| ParB family protein [Vibrio cholerae O395]
gi|153212985|ref|ZP_01948579.1| ParB family protein [Vibrio cholerae 1587]
gi|153821962|ref|ZP_01974629.1| ParB family protein [Vibrio cholerae B33]
gi|153827195|ref|ZP_01979862.1| ParB family protein [Vibrio cholerae MZO-2]
gi|227082884|ref|YP_002811435.1| ParB family protein [Vibrio cholerae M66-2]
gi|229508285|ref|ZP_04397789.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae BX 330286]
gi|229508637|ref|ZP_04398132.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae B33]
gi|229515961|ref|ZP_04405418.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae TMA 21]
gi|229517147|ref|ZP_04406593.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae RC9]
gi|229520161|ref|ZP_04409588.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae TM 11079-80]
gi|229530215|ref|ZP_04419604.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae 12129(1)]
gi|229606559|ref|YP_002877207.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae MJ-1236]
gi|254291140|ref|ZP_04961937.1| ParB family protein [Vibrio cholerae AM-19226]
gi|254851563|ref|ZP_05240913.1| ParB family protein [Vibrio cholerae MO10]
gi|255746818|ref|ZP_05420764.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholera CIRS 101]
gi|262155898|ref|ZP_06029020.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae INDRE 91/1]
gi|262167088|ref|ZP_06034803.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae RC27]
gi|298501184|ref|ZP_07010983.1| ParB family protein [Vibrio cholerae MAK 757]
gi|12230456|sp|Q9KNG7|PARB_VIBCH RecName: Full=Probable chromosome-partitioning protein parB
gi|9657374|gb|AAF95911.1| ParB family protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121546612|gb|EAX56804.1| ParB family protein [Vibrio cholerae 2740-80]
gi|124116211|gb|EAY35031.1| ParB family protein [Vibrio cholerae 1587]
gi|126520501|gb|EAZ77724.1| ParB family protein [Vibrio cholerae B33]
gi|146317019|gb|ABQ21558.1| ParB family protein [Vibrio cholerae O395]
gi|149738918|gb|EDM53242.1| ParB family protein [Vibrio cholerae MZO-2]
gi|150422985|gb|EDN14935.1| ParB family protein [Vibrio cholerae AM-19226]
gi|227010772|gb|ACP06984.1| ParB family protein [Vibrio cholerae M66-2]
gi|227012000|gb|ACP08210.1| ParB family protein [Vibrio cholerae O395]
gi|229332348|gb|EEN97835.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae 12129(1)]
gi|229342755|gb|EEO07746.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae TM 11079-80]
gi|229346210|gb|EEO11182.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae RC9]
gi|229347061|gb|EEO12023.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae TMA 21]
gi|229354351|gb|EEO19279.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae B33]
gi|229354558|gb|EEO19480.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae BX 330286]
gi|229369214|gb|ACQ59637.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae MJ-1236]
gi|254847268|gb|EET25682.1| ParB family protein [Vibrio cholerae MO10]
gi|255735575|gb|EET90974.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholera CIRS 101]
gi|262024474|gb|EEY43160.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae RC27]
gi|262030350|gb|EEY48992.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae INDRE 91/1]
gi|297540056|gb|EFH76118.1| ParB family protein [Vibrio cholerae MAK 757]
gi|327485240|gb|AEA79647.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Vibrio cholerae LMA3894-4]
Length = 293
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 173/298 (58%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + ++ + +SI ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSAEGELADLSISNLKPGIYQPRKDLSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAAK A L +VP +I+ V+++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRHLPTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRG 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNAMEEAQALERLQNEFNLTHQQVAEVIGKSRTTVTNLLRLNQLSD 180
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR ++ + +AQ + K+++VR TE+LV++
Sbjct: 181 DVKRLLETKQLEMGHARALLMLEGEQQVEIAQQVAKKQLTVRQTEQLVKK-----CLSDP 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ + L + +S K+ +SI + N K + I + +L+++ + L
Sbjct: 236 SDAKNVSEDLEIQQLSQNLSEKLAAKVSIVRTPNGKSKVTISLDEPHKLELLIAKLQN 293
>gi|253581102|ref|ZP_04858362.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847638|gb|EES75608.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 324
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 110/317 (34%), Positives = 176/317 (55%), Gaps = 33/317 (10%)
Query: 7 KRRLGRGLAALIGEVNQSIDSP---------------------------EKKTETIPESQ 39
K LGRGL A + + P +K+T
Sbjct: 5 KNGLGRGLDAFFPDRTSVVKEPARKTTTKTVKTEKKSDVAEKQTNPTVAKKQTADSKTGA 64
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
+ I S+ PN PR F+ + L +L +SIK +G++ PL+V + Y+IIAGERR+R
Sbjct: 65 MIVKISSVEPNMDQPRKQFDEDALMELSESIKQYGVLHPLLV-SDKKDYYEIIAGERRWR 123
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+A L+E+PVI++ + +EI+++EN+QR+DLNP+EEA+ Y++LI E+ Q++I
Sbjct: 124 AAKLAGLTEIPVIVKEFSEQELVEISLIENIQREDLNPVEEAMAYKRLIDEFHLKQDEIA 183
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKK 216
VGKSR+ V N +R+LKL V++M+ E I+ GHAR ++ S+A + +K
Sbjct: 184 ERVGKSRTAVTNAMRLLKLSEKVQQMLIDEMITAGHARAILSIADKEKQESIAMKVFDEK 243
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQ 275
+SVR+TE LV+ + KK S E + LE+K+ S +G + I + +N+KG+
Sbjct: 244 LSVRETEALVKRMLEPPKTAKKSKFSSAE-DAIYESLEEKMKSIMGTRVQIHRKKNDKGK 302
Query: 276 FCIKYETNEQLKIICSL 292
I+Y + ++L+ I L
Sbjct: 303 IEIEYYSKDELERIIDL 319
>gi|83814927|ref|YP_444658.1| spoOJ protein [Salinibacter ruber DSM 13855]
gi|83756321|gb|ABC44434.1| spoOJ protein [Salinibacter ruber DSM 13855]
Length = 326
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 101/321 (31%), Positives = 166/321 (51%), Gaps = 33/321 (10%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIP------------------ESQDCISIHSI 47
K LG+GL AL+ E S + + T +++ I
Sbjct: 3 KKSALGKGLNALLPEDQDEQASGDGEGSTDEAPEEQSQLYQFEDGTRLLGRVAEVAVERI 62
Query: 48 VPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLS 107
PNP+ PR FE L++L SI+ GIIQP+ VRA+ +G ++II+GERR RAA+ A +
Sbjct: 63 RPNPYQPRQEFEEGALDELAASIEQIGIIQPITVRALGDGEFEIISGERRLRAARRAGME 122
Query: 108 EVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRS 167
+P IR D++ LE+A+VENVQR++LNP+E ALGY++L+ E TQ ++ V KSR+
Sbjct: 123 HLPAFIREADSEEMLEMALVENVQREELNPIEIALGYQRLVEECDLTQEEVAERVSKSRA 182
Query: 168 HVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEE 224
V+N LR+L+LP ++ +R +++S+GHAR L++ D + + +++ +SVR+ E
Sbjct: 183 TVSNFLRLLRLPPRIQAALRDKQVSMGHARALIAMDDDEAQVALLEETIAEDLSVREVER 242
Query: 225 LVQEQDNKKEKRKK-----------IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-N 272
++ + + +L ++ S+ + I+HR
Sbjct: 243 RARQWHEDEGAADSEAAEGADDTAVPETAPDRDDLQFEELRNRLRSRFSTQVQIQHRKDG 302
Query: 273 KGQFCIKYETNEQLKIICSLL 293
+G I Y + E L + LL
Sbjct: 303 EGTIEISYYSEEDLNRLVELL 323
>gi|167759566|ref|ZP_02431693.1| hypothetical protein CLOSCI_01923 [Clostridium scindens ATCC 35704]
gi|167662793|gb|EDS06923.1| hypothetical protein CLOSCI_01923 [Clostridium scindens ATCC 35704]
Length = 304
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 168/300 (56%), Gaps = 10/300 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGE------VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNP 54
M+ N K+ LG+GL +LI N I + + K + + + I+ + PN P
Sbjct: 1 MAVN--KKGLGKGLDSLIPNNRNVKPANPDISTEQVKQPELKSGEQMMKINMVEPNRDQP 58
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R FE + L +L SIK G++QPL+VR Y+IIAGERR+RAAK+A + EVPVII+
Sbjct: 59 RKNFEEDALLELADSIKQFGVLQPLLVRKNK-DYYEIIAGERRWRAAKLAGIKEVPVIIK 117
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+ + +EIA++EN+QR++LNP+EEA+ Y++L+ E+ Q+++ V KSR+ V N +R
Sbjct: 118 DYSEQEIVEIALIENIQRENLNPIEEAMAYKKLLEEFSLKQDEVAERVSKSRTAVTNSMR 177
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+L+L V++MI + IS GHAR L++ D + E + + K
Sbjct: 178 LLRLNDKVQQMIIDDMISTGHARALLAIDDKEQQYILANKIFDEKLSVRETEKLIKDIKN 237
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+K + E DLE+K+ +G +SI KG+ I+Y ++++L+ + ++
Sbjct: 238 PKKPKEKKVIEHVFIYNDLEEKMKEVMGTKVSIASKGKGKGKIEIEYYSDKELERVFDMI 297
>gi|145588207|ref|YP_001154804.1| parB-like partition protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046613|gb|ABP33240.1| chromosome segregation DNA-binding protein [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 296
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 161/299 (53%), Gaps = 16/299 (5%)
Query: 4 NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
K+ LGRGL AL+GE ++ + + + ++ + PR E+ L
Sbjct: 3 AIKKKGLGRGLEALLGEKTSAVS--------PSTDINRLPLTALQAGKYQPRQKMEAGAL 54
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
++L +SI+ GI+QPL+VR + G Y+IIAGERRFRAA +A L EVPV++ D++++
Sbjct: 55 QELAESIREQGIMQPLLVRLVGPGKYEIIAGERRFRAATIAGLKEVPVLVSGADDEAAAA 114
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+A+VEN+QR+DLNPLEE+ G +LI E+G+T VGKSRS + N+LR+++L V+
Sbjct: 115 MALVENMQREDLNPLEESQGLARLIEEFGFTHEQAAKAVGKSRSAITNLLRLIQLAKPVQ 174
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLA--------QVIVSKKMSVRDTEELVQEQDNKKEK 235
M+ +I +GHAR L+ +A + V + + + Q K+
Sbjct: 175 SMLLAGDIDMGHARALLPLPGASQVALAQRIAAQGLSVREAERMTAALVIAGGQIGDKKT 234
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
K S K+ + L ++I+ +GLN K + G+ I + ++L + LG
Sbjct: 235 NGKGGSASSSKDPDMRRLTQEIADLIGLNTEFKLKGKGGELRIHFSQFDELDSLLKKLG 293
>gi|254226940|ref|ZP_04920506.1| ParB family protein [Vibrio cholerae V51]
gi|125620545|gb|EAZ48913.1| ParB family protein [Vibrio cholerae V51]
Length = 293
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 95/298 (31%), Positives = 173/298 (58%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + ++ + +SI ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSAEGELADLSISNLKPGIYQPRKDLSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAAK A L +VP +I+ V+++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRHLPTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRG 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V N+LR+ +L
Sbjct: 121 ALAMALIENIQREDLNAMEEAQALERLQNEFNLTHQQVAEVIGKSRTTVTNLLRLNQLSD 180
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR ++ + +AQ + K+++VR TE+LV++
Sbjct: 181 DVKRLLETKQLEMGHARALLMLEGEQQVEIAQQVAKKQLTVRQTEQLVKK-----CLSDP 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ + L + +S K+ +SI + N K + I + +L+++ + L
Sbjct: 236 SDAKNVSEDLEIQQLSQNLSEKLAAKVSIVRTPNGKSKVTISLDEPHKLELLIAKLQN 293
>gi|23100941|ref|NP_694408.1| stage 0 sporulation protein J [Oceanobacillus iheyensis HTE831]
gi|22779176|dbj|BAC15442.1| stage 0 sporulation protein J (Soj antagonist : chromosome
positioning and transport protein) [Oceanobacillus
iheyensis HTE831]
Length = 274
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 100/291 (34%), Positives = 154/291 (52%), Gaps = 22/291 (7%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
R LG+GL ALI + + I I S PNP+ PR F ++ +E+L
Sbjct: 3 RGLGKGLDALI--------------QHSGDEVQDIDIQSCRPNPYQPRKTFHTDSIEELK 48
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK +GIIQ I Y+I+ GERRFRAAK A L+ +P +++ +D+ +EIA++
Sbjct: 49 NSIKEYGIIQ-PITVRKSIKGYEIVVGERRFRAAKEAGLNTIPAVVKQLDDDKMMEIALL 107
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL P+EEA Y LI E TQ+++ +GKSRSH+AN++R+L LP V I
Sbjct: 108 ENLQREDLTPIEEAQAYANLIEELKLTQDELSKRLGKSRSHIANMVRLLSLPDQVVAYIN 167
Query: 188 KEEISLGHARTLVSTSDPLSLAQ---VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
E+S+GH R L+ L I +K +VR E+ + E + K K K +
Sbjct: 168 NGELSMGHGRALLGLKKKEYLLPLVQRIRKEKWNVRQVEKAIVEMNEKPAKPKPKAKK-- 225
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ + E + +G + I KG+ I++ ++ L I L +
Sbjct: 226 --DIFIQERESALRDVLGTAVHIHKGKRKGKIEIEFYNDDDLNRIIEYLDK 274
>gi|218767485|ref|YP_002341997.1| putative chromosome segregation proteins [Neisseria meningitidis
Z2491]
gi|304388496|ref|ZP_07370599.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Neisseria
meningitidis ATCC 13091]
gi|12230453|sp|Q9JW77|PARB_NEIMA RecName: Full=Probable chromosome-partitioning protein parB
gi|121051493|emb|CAM07786.1| putative chromosome segregation proteins [Neisseria meningitidis
Z2491]
gi|304337493|gb|EFM03659.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Neisseria
meningitidis ATCC 13091]
gi|319409747|emb|CBY90053.1| putative chromosome partitioning protein ParB [Neisseria
meningitidis WUE 2594]
gi|325131429|gb|EGC54137.1| putative chromosome partitioning protein parB [Neisseria
meningitidis M6190]
gi|325137500|gb|EGC60084.1| putative chromosome partitioning protein parB [Neisseria
meningitidis ES14902]
Length = 286
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A L+E+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQAALQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E I LG
Sbjct: 225 RPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGKIILHFDTPETFDHILKQLG 281
>gi|329121635|ref|ZP_08250256.1| chromosome partitioning protein SpoOJ [Dialister micraerophilus DSM
19965]
gi|327468790|gb|EGF14267.1| chromosome partitioning protein SpoOJ [Dialister micraerophilus DSM
19965]
Length = 283
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 107/300 (35%), Positives = 171/300 (57%), Gaps = 23/300 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS +RLGRGL AL+G E I ++ I ++ I NP+ PR F
Sbjct: 1 MSKE---KRLGRGLKALLG-------------EDIDKNIQEIPVNQIDANPNQPRKAFNE 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L+ L QSIK +G++QP+IVR DNG Y++IAGERR RAAK A L ++PV+I+ +N+
Sbjct: 45 ETLKKLEQSIKKYGVVQPVIVRKKDNGNYELIAGERRLRAAKNAQLEKIPVVIKEYNNRE 104
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
S EIA++EN+QR+DLNP+EE YE +I +Y TQ ++ I GKSRS++ N LR+L P
Sbjct: 105 SAEIALIENLQREDLNPIEEGKAYESIIKKYDLTQEEMSQIAGKSRSYITNTLRLLTFPD 164
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+++++++ ++++ G AR L++ +A+ + K V + Q + EK
Sbjct: 165 AIQKLLQSKKLTTGQARPLLALKT---VAEQLKLAKKIVEEGLSARQVEKILGEKTTPKP 221
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNN----KGQFCIKYETNEQLKIICSLLGEN 296
+ + YL +E++I + +G + IK KG I ++ ++ I LL ++
Sbjct: 222 KKEVQISTYLRAMEEEIITSLGTLVKIKTGRGKNSKKGTITISFKNEDEFTRITKLLKKD 281
>gi|308234068|ref|ZP_07664805.1| parB-like partition protein [Atopobium vaginae DSM 15829]
gi|328943465|ref|ZP_08240930.1| chromosome partitioning protein SpoOJ [Atopobium vaginae DSM 15829]
gi|327491434|gb|EGF23208.1| chromosome partitioning protein SpoOJ [Atopobium vaginae DSM 15829]
Length = 287
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 167/302 (55%), Gaps = 19/302 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + +P++ IS+ I PN + PR +F+
Sbjct: 1 MA---KKSGLGRGLESLLTSSDTEAGTPKESE--------LISLDKIKPNKNQPRKHFDP 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SIK +G++QP++VR + Y+I+AGERRF+AAK A L E+PV +RN+ +
Sbjct: 50 VQLQELADSIKQNGVLQPILVRKKGSA-YEIVAGERRFQAAKQAGLKEIPVCVRNITDDE 108
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++A++EN+QR DLNPLEEALGY++LI + TQ ++ ++ KSRS ++N +R+L LP
Sbjct: 109 IFKLALIENLQRADLNPLEEALGYKKLIKQLKVTQEELSKVLSKSRSAISNTMRLLDLPQ 168
Query: 181 SVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ ++ IS GHAR ++ + LA+ IV + +SVR+TE+L +K
Sbjct: 169 EIQNLLGDMLISAGHARALLSIPQEDAQIKLAKKIVEEHLSVRETEKLAPLFSGATLDKK 228
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+E +++ +G + +K K + I++ N+ L + +
Sbjct: 229 PRTVLPQE----YKRAARQLHIALGAKVKVKESGTKHKIEIEFADNDDLMRLVRRIQSGS 284
Query: 298 FE 299
E
Sbjct: 285 SE 286
>gi|313896827|ref|ZP_07830374.1| stage 0 sporulation protein J [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974274|gb|EFR39742.1| stage 0 sporulation protein J [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 305
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 156/283 (55%), Gaps = 8/283 (2%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
++ + + + +SI I PN PR F+ LE+L +SI HGI+QPLIVR
Sbjct: 2 KTAGAVPPHSAGSAGTPALLSIDRIQPNRFQPRREFDEGALEELRESIAQHGILQPLIVR 61
Query: 83 AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
I G Y++IAGERR RAAK+A L+E+P + R + E+A++EN+QR+DLNP+EEA
Sbjct: 62 DIGGGTYELIAGERRLRAAKLAGLTEIPAVFRIAADAELAEMALIENLQREDLNPIEEAR 121
Query: 143 GYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV-- 200
YE+L+ E+ +Q + V +SRS +AN +R+L+L +SV+ + ++ G R L+
Sbjct: 122 AYERLLGEFKLSQEQLARRVARSRSAIANSVRLLRLAASVQAFLANGVLTTGQVRPLLAL 181
Query: 201 -STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK---EKYLTDLEKK 256
S + A+ I +++ R E LV+ KK ++ + ++ + E++
Sbjct: 182 ESKTLQSEAAEYIQEHELTARGVEALVKRLIKDPNALKKTSAAPAQRSAPDIFVREAEER 241
Query: 257 ISSKVGLNISIKHRN--NKGQFCIKYETNEQLKIICSLLGEND 297
++ +G +SI+ KG+ I Y + + L+ + LL D
Sbjct: 242 LTRSLGTKVSIRAGREEGKGKLEISYFSADDLERLLGLLTAAD 284
>gi|313203925|ref|YP_004042582.1| chromosome segregation DNA-binding protein [Paludibacter
propionicigenes WB4]
gi|312443241|gb|ADQ79597.1| chromosome segregation DNA-binding protein [Paludibacter
propionicigenes WB4]
Length = 293
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 99/302 (32%), Positives = 165/302 (54%), Gaps = 17/302 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGL ALI E + + S + +H + NP+ PR YF+
Sbjct: 1 MAKNIT--GLGRGLGALI--------DTENISTSGSSSISEVEMHLVFANPNQPRTYFDE 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L +L SI+ G+I P+ +R D+G Y IIAGERRFRA+K L +P ++ ++
Sbjct: 51 DALSELAASIRELGVISPITLRKNDDGTYLIIAGERRFRASKQVGLKTIPAYVKTAADEQ 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL + +L+ EY TQ + VGK R+ +AN LR+L+LP+
Sbjct: 111 VMEMALIENIQREDLNAIEIALTFYRLMEEYKLTQERLSERVGKKRATIANYLRLLRLPA 170
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ I+ ++I +GHAR ++ + L L + I+ +VR EELV+
Sbjct: 171 EIQMGIKDKKIDMGHARAILGLNDPAVQLHLYESIIQNDYTVRKVEELVRLFLETGSLDT 230
Query: 238 KIFE---GSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLL 293
K K K +L+ ++S+ G + + + + KG+ I + ++E+L I L
Sbjct: 231 KPKSGGGNPVTKLKEFDELQTQLSNVFGTKVQFLCNSDGKGKISIPFASDEELARIMELF 290
Query: 294 GE 295
+
Sbjct: 291 DK 292
>gi|332883095|gb|EGK03379.1| hypothetical protein HMPREF9456_02016 [Dysgonomonas mossii DSM
22836]
Length = 298
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 96/298 (32%), Positives = 161/298 (54%), Gaps = 23/298 (7%)
Query: 10 LGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQS 69
LGRGL ALI + ++ S + I + I NP PR F+ E L++L S
Sbjct: 3 LGRGLDALI--------AIDEVKTEGSSSINEIELSKIQANPDQPRRIFDDEALQELASS 54
Query: 70 IKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
I+ G+IQP+ +R I+ Y+IIAGERR+RA+ MASL+ +P I+ ++++ +E+A+VEN
Sbjct: 55 IRQIGVIQPITLRKINEDSYQIIAGERRYRASLMASLTTIPAYIKTAEDENVMEMALVEN 114
Query: 130 VQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
+QR+DLN +E AL Y+ LI Y TQ + +GK R+ +AN LR+LKLP+ ++ IR +
Sbjct: 115 IQREDLNSIEIALAYQNLIETYNLTQERLSERIGKKRTTIANYLRLLKLPAEIQMGIRDK 174
Query: 190 EISLGHARTLVSTSDPLSLAQVIV------SKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+I + HARTLV+ DP + +V V + + + + ++ K+
Sbjct: 175 KIDMAHARTLVTLEDPTAQLEVYELILEEGLSVRKVEEYVRAISKGEKLEDLLKEEKAVE 234
Query: 244 REKEKYLTD--------LEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
K+ + L+ +S + + + KG+ I +++ E L+ I ++
Sbjct: 235 TVKKAGIKKATPEEFELLKDHLSKFFSTKVQLTCNEKGKGKISIPFKSEEDLEKIIAI 292
>gi|227873157|ref|ZP_03991448.1| stage 0 DNA-binding protein [Oribacterium sinus F0268]
gi|227840988|gb|EEJ51327.1| stage 0 DNA-binding protein [Oribacterium sinus F0268]
Length = 290
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 117/299 (39%), Positives = 173/299 (57%), Gaps = 13/299 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K LGRG+ L + E++ + + I PNP PR F E LE
Sbjct: 1 MAKHGLGRGVDTLFAGKKDGREKKEEQA--------MVKLSLIQPNPKQPRKQFSQEELE 52
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK G++QPL+V+ Y+IIAGERRFRAAKMA L+E+PV+IR+ D K S E+
Sbjct: 53 ELSQSIKQFGVLQPLLVKKEGPL-YEIIAGERRFRAAKMAGLTEIPVLIRDYDEKLSKEV 111
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
AI+EN+QR+DLN +EEA+ Y+ L++EY +Q ++ V K RS +AN LR+LKL + E
Sbjct: 112 AIIENIQREDLNAVEEAMAYQSLLTEYHLSQEELAERVAKKRSTIANSLRLLKLEEEILE 171
Query: 185 MIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+R+ +S GHAR L+S + A+ V KK SVR+ E +E+ E+++K
Sbjct: 172 YLRQNLLSEGHARALLSVENKEKRISLAKECVEKKWSVREMERRAKEEKTPTERQEKPKN 231
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLGENDFE 299
S + + + LE+K+ +G + I RN +KG+ I+Y + E L I +L E
Sbjct: 232 LSSQWKTIVHGLEEKMKEHLGTKVKITARNEDKGKVEIEYYSKEDLDRITRILEGRGEE 290
>gi|313892200|ref|ZP_07825793.1| nucleoid occlusion protein [Dialister microaerophilus UPII 345-E]
gi|313119338|gb|EFR42537.1| nucleoid occlusion protein [Dialister microaerophilus UPII 345-E]
Length = 283
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 107/300 (35%), Positives = 171/300 (57%), Gaps = 23/300 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS +RLGRGL AL+G E I ++ I ++ I NP+ PR F
Sbjct: 1 MSKE---KRLGRGLKALLG-------------EDIDKNIQEIPVNQIDANPNQPRKAFNE 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L+ L QSIK +G++QP+IVR DNG Y++IAGERR RAAK A L ++PV+I+ +N+
Sbjct: 45 ETLKKLEQSIKKYGVVQPVIVRKKDNGNYELIAGERRLRAAKNAQLEKIPVVIKEYNNRE 104
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
S EIA++EN+QR+DLNP+EE YE +I +Y TQ ++ I GKSRS++ N LR+L P
Sbjct: 105 SAEIALIENLQREDLNPIEEGKAYESIIKKYDLTQEEMSQIAGKSRSYITNTLRLLTFPD 164
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+++++++ ++++ G AR L++ +A+ + K V + Q + EK
Sbjct: 165 AIQKLLQSKKLTTGQARPLLALKT---VAEQLKLAKKIVEEGLSARQVEKMLGEKTTPKP 221
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNN----KGQFCIKYETNEQLKIICSLLGEN 296
+ + YL +E++I + +G + IK KG I ++ ++ I LL ++
Sbjct: 222 KKEVQISTYLRTMEEEIITSLGTLVKIKTGKGKNSKKGTITISFKNEDEFTRITKLLKKD 281
>gi|29830851|ref|NP_825485.1| ParB-like protein [Streptomyces avermitilis MA-4680]
gi|29607964|dbj|BAC72020.1| putative ParB homolog [Streptomyces avermitilis MA-4680]
Length = 367
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 5/274 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
E + + + +I PN PR F+ + L +L SIK G++QP++VR +
Sbjct: 76 EAPAAPVGAHFAELPLDAITPNSRQPREVFDEDALAELVTSIKEVGLLQPVVVRQVGPAR 135
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y++I GERR+RA + A L +P I+R D++ L A++EN+ R LNPLEEA Y+QL+
Sbjct: 136 YELIMGERRWRACREAGLDAIPAIVRATDDEKLLLDALLENLHRAQLNPLEEAAAYDQLL 195
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDP 205
++ T + + +G+SR V+N LR+LKL +V+ + +S GHAR L+ + +
Sbjct: 196 KDFNCTHDQLADRIGRSRPQVSNTLRLLKLSPAVQRRVAAGVLSAGHARALLSVEDSEEQ 255
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKE--KRKKIFEGSREKEKYLTDLEKKISSKVGL 263
LA IV++ +SVR EE+V ++ + R K L++L ++S +
Sbjct: 256 DRLAHRIVAEGLSVRAVEEIVTLMGSRPQTAPRSKGPRAGTRLSPALSELATRLSDRFET 315
Query: 264 NISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ + KG+ +++ + + L+ I S L +
Sbjct: 316 RVKVDLGQKKGKIVVEFASMDDLQRILSSLAPGE 349
>gi|225012750|ref|ZP_03703185.1| parB-like partition protein [Flavobacteria bacterium MS024-2A]
gi|225003283|gb|EEG41258.1| parB-like partition protein [Flavobacteria bacterium MS024-2A]
Length = 295
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 98/297 (32%), Positives = 162/297 (54%), Gaps = 4/297 (1%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDS-PEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + K LGRGL+AL+ + SI+S +K + I + I I I NP PR +F
Sbjct: 1 MTKSNRKPALGRGLSALLNDPENSIESVKDKNADQIIGNIIDIPIEKINANPFQPRTHFN 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SI GIIQP+ VR G++++I+GERR++A+KMA L +P +R +++
Sbjct: 61 DEALNELSTSILELGIIQPVTVRKTKEGVFELISGERRYKASKMAGLKSIPAYVRLANDQ 120
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
SLE+A+VEN+QR+DL+P+E L Y +LI E TQ+ + VGK RS + N +R+LKL
Sbjct: 121 ESLEMALVENIQREDLDPIEIGLSYRRLIEEINLTQDQLSDRVGKKRSTITNYMRLLKLD 180
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++ IR +S+GH R LV+ + ++ + E + K+ K
Sbjct: 181 PIIQTGIRDGFVSMGHGRALVNVEKVEIQLDLYK--QIVKKGLSVRATETLVRNSKKTKS 238
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
E K +++ ++ + +++ + KG I +E+ EQL+ I + + +
Sbjct: 239 SETLTYKPPFISQAAAELETLFKTSVTATANSQGKGVLKIAFESQEQLQRILNEIKK 295
>gi|111020643|ref|YP_703615.1| chromosome partitioning protein [Rhodococcus jostii RHA1]
gi|110820173|gb|ABG95457.1| probable chromosome partitioning protein [Rhodococcus jostii RHA1]
Length = 360
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 84/280 (30%), Positives = 151/280 (53%), Gaps = 5/280 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G +S + + I+ I NP PR F+ + L +L SI+ G++QP
Sbjct: 74 GADGESGNGAQPLPSPTGAVYREIAPDLIERNPKQPRQVFDDDALAELVHSIREFGLMQP 133
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR +D+G ++++ GERR+RA++ A L +P I+R + + L A++EN+ R LNPL
Sbjct: 134 IVVRPLDDGKFQLVMGERRWRASQEAELETIPAIVRETGDDAMLRDALLENIHRVQLNPL 193
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ E+ T ++ + +G+SR V N++R+LKLP V+ + +S GHAR
Sbjct: 194 EEAAAYQQLLEEFEVTHEELAAKIGRSRPVVTNMIRLLKLPIPVQRRVAAGVLSAGHARA 253
Query: 199 LVS----TSDPLSLAQVIVSKKMSVRDTEELVQEQD-NKKEKRKKIFEGSREKEKYLTDL 253
L+S +A IV++ MSVR TEE V + + + + + L D+
Sbjct: 254 LLSLEAGADAQEVMAARIVAEGMSVRATEEAVTLANRSDDQAAQPAQRRKPIQMPGLQDV 313
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+++S +++ KG+ +++ + + L+ I ++
Sbjct: 314 AERLSDSFDTRVTVSLGKRKGKIVVEFGSVDDLQRIVGMM 353
>gi|312144694|ref|YP_003996140.1| parB-like partition protein [Halanaerobium sp. 'sapolanicus']
gi|311905345|gb|ADQ15786.1| parB-like partition protein [Halanaerobium sp. 'sapolanicus']
Length = 281
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 107/292 (36%), Positives = 174/292 (59%), Gaps = 13/292 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SK+RLG+GL+ALI + S + + I I NP PR F+ E L+
Sbjct: 1 MSKKRLGKGLSALINNDDNIDQS----------RVEEVFIDQIEANPFQPRRNFDEEALK 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SIK G+IQP+ +R I Y+I+AGERR+RA+K+ L+++P +IR+ D++ LEI
Sbjct: 51 ELASSIKEKGLIQPITLRKIKAEKYQIVAGERRWRASKILDLAKIPAVIRSFDDQEMLEI 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEA Y++++ + TQ ++ VGK+RS V+N++R+LKL V +
Sbjct: 111 ALIENLQREDLNPIEEARAYKKMLDNFDITQEELAQRVGKNRSTVSNMIRLLKLSDKVLK 170
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ + I++GHAR L + + I+ K ++VR TEE V+E N K K +
Sbjct: 171 HLERGTITVGHARALLGLDIEAQGPACENIIIKDLTVRATEEFVEELKNPTHKNKNKSKT 230
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
++++ +E KI++ +G N+ IK R I+ E+ E+L+ I + L
Sbjct: 231 KELPKEWVAAVE-KIAASLGSNVKIKSRKKNKLLTIEIESLEKLEEIIAKLN 281
>gi|168187288|ref|ZP_02621923.1| stage 0 sporulation protein J [Clostridium botulinum C str. Eklund]
gi|169294791|gb|EDS76924.1| stage 0 sporulation protein J [Clostridium botulinum C str. Eklund]
Length = 282
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 106/297 (35%), Positives = 165/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K LG+GL ALI E + +S + ++ I PN PR F+
Sbjct: 1 MS---KKFGLGKGLGALIPEESLE----------NKDSMLKVDMNLIKPNNDQPRKNFDE 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E + L +SIK HGIIQPLI++ DN I AGERR+RAAK A EVP +I + +K
Sbjct: 48 EKIIQLSESIKQHGIIQPLILQKKDNIYSII-AGERRWRAAKKAGFKEVPAVIVELSDKE 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LEI+++EN+QR+DLNP+EEA+ Y++LI E+ TQ+++ +GKSR+ + N +R+L L
Sbjct: 107 ILEISLIENIQREDLNPIEEAIAYKKLIDEFKLTQDELSKRIGKSRTAITNCMRLLNLDF 166
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ + I+ GH R L+ +A I+ K++SVR TE +++ K K K
Sbjct: 167 RAQGYLIDGVITEGHGRALLALDDKEIQYKMALEIIDKELSVRQTESIIKNMKKKSIKEK 226
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + Y D+E K+ S + ++ + N+G+ I+Y + E L+ I +L
Sbjct: 227 EEQHDNIK--PYYDDIENKLESLFNTKVVLRSKGNRGKIQIEYYSEEDLQRIIDILK 281
>gi|169351473|ref|ZP_02868411.1| hypothetical protein CLOSPI_02253 [Clostridium spiroforme DSM 1552]
gi|169291695|gb|EDS73828.1| hypothetical protein CLOSPI_02253 [Clostridium spiroforme DSM 1552]
Length = 304
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 9/294 (3%)
Query: 2 SNNYSKRRLGRGLAALIG-EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
S+ ++LG+GL A+ G +++ ID EK T IS+ I PNP+ PR F+
Sbjct: 14 SSTVKNKKLGKGLDAIFGGDISALIDDIEKNTPETKH--INISLDEIRPNPYQPRKLFDE 71
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SIK HGI QP+I+++ Y+I+AGERR RAAK A LS VP II + +
Sbjct: 72 EKLEELAISIKEHGIFQPVILKS-SIQGYEIVAGERRCRAAKKAGLSTVPAIIVDFTDDQ 130
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DLN +EEA Y ++ + G TQ + +GKSRS++AN LR+L+LP
Sbjct: 131 MMEIALLENIQREDLNSIEEAKAYLSMMDKLGLTQEQLAKRIGKSRSYIANTLRLLQLPE 190
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
++ + + ++S+GHAR L++ + A + ++ + +
Sbjct: 191 MIQNYVLEGKMSMGHARCLITLPKEKAEALAKRCIDEGLS-VRDVENVVKGIELGNSRKE 249
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
K K L +E + K I + IKY + L I L+G
Sbjct: 250 RPKVIKSKELVYVEGLLRKKFRTKIKVDEN----TLTIKYTDTKDLNRILELMG 299
>gi|161869267|ref|YP_001598435.1| chromosome segregation protein [Neisseria meningitidis 053442]
gi|161594820|gb|ABX72480.1| chromosome segregation protein [Neisseria meningitidis 053442]
Length = 286
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A L+E+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQMAHQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E I LG
Sbjct: 225 RLEPKKPATADIDRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHILKQLG 281
>gi|229524901|ref|ZP_04414306.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae bv. albensis VL426]
gi|229338482|gb|EEO03499.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio cholerae bv. albensis VL426]
Length = 293
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 95/298 (31%), Positives = 174/298 (58%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + ++ + +SI ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSTEGELADLSISNLKPGIYQPRKDLSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAAK A L +VP +I+ V+++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRHLPTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRG 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNAMEEAQALERLQNEFNLTHQQVAEVIGKSRTTVTNLLRLNQLSD 180
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR ++ + + +AQ + K++SVR TE+LV++
Sbjct: 181 DVKRLLETKQLEMGHARALLMLESEQQVEIAQQVAKKQLSVRQTEQLVKK-----CLSDT 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ + L + +S K+ +SI + N K + I + +L+++ + L
Sbjct: 236 SDAKNVSEDLEIQQLSQNLSEKLAAKVSIVRTPNGKSKVTISLDEPHKLELLIAKLQN 293
>gi|167754889|ref|ZP_02427016.1| hypothetical protein CLORAM_00393 [Clostridium ramosum DSM 1402]
gi|167704939|gb|EDS19518.1| hypothetical protein CLORAM_00393 [Clostridium ramosum DSM 1402]
Length = 325
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 102/293 (34%), Positives = 163/293 (55%), Gaps = 13/293 (4%)
Query: 5 YSKRRLGRGLAALIG-EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
++LG+GL A+ G +++ ID EK T Q +S+ I PNP+ PR F+ E L
Sbjct: 38 TKNKKLGKGLDAIFGGDISTLIDDIEKNT--PESKQITVSLEEIRPNPYQPRKLFDEEKL 95
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
++L SIK HG+ QP+I+ Y+I+AGERR RAAK+A L E+P II + ++ +E
Sbjct: 96 QELAISIKEHGVFQPVIL-KKSIQGYEIVAGERRCRAAKIAGLVEIPAIIVDFTDQQMME 154
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR++LN +EEA Y+ ++ Q+++ +GKSRS++AN LR+L+LP ++
Sbjct: 155 IALLENIQRENLNSIEEAKAYQMMMERLNLKQDELAKRIGKSRSYIANTLRLLQLPEMIQ 214
Query: 184 EMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ + +I++GHAR L+ SLA + + +SVRD E +V + +
Sbjct: 215 NYVLEGKITMGHARCLITLPQEKAESLAARCIEEGLSVRDVENIV---KGIELGNSRKDR 271
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
EK K +E + K I + + IKY + L I L+G
Sbjct: 272 PKVEKPKEYVYVEGLLRKKFRTKIKVDEKA----VTIKYTDTKDLNRILELMG 320
>gi|308390041|gb|ADO32361.1| ParB family protein [Neisseria meningitidis alpha710]
gi|325143654|gb|EGC65973.1| putative chromosome partitioning protein parB [Neisseria
meningitidis M01-240013]
Length = 286
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A L+E+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQVALQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E I LG
Sbjct: 225 RPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHILKQLG 281
>gi|260771035|ref|ZP_05879963.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio furnissii CIP 102972]
gi|260613924|gb|EEX39115.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio furnissii CIP 102972]
Length = 293
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 92/296 (31%), Positives = 175/296 (59%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSID----SPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + + + + + I ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLSTSSLAREKQHVASQSQAMSSEGELTDLVITNLKPGMYQPRKDMSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAA+ A L +VP +++ VD+++
Sbjct: 61 EALEELSASIQSQGIIQPIVVRPLALGGYEIIAGERRWRAARQAGLKQVPCLVKRVDDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQDEFKLTHQQVADVIGKSRATVSNLLRLNQLDD 180
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
SV+ ++ ++ +GHAR ++ + +A + K+++VR TE+LV++ ++ K
Sbjct: 181 SVKRLVETRQLEMGHARALLMLDGEQQIEVAARVAKKQLTVRQTEQLVKKCLSEDSDVKN 240
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+ E + + + + +S K+G +SI + ++ K + I + + + + + L
Sbjct: 241 VPE-----DVEIQQMSQNLSEKLGAKVSIVRSKSGKSKVTISLDEPHKFEQLIAKL 291
>gi|329118572|ref|ZP_08247276.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327465307|gb|EGF11588.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 296
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 95/300 (31%), Positives = 169/300 (56%), Gaps = 19/300 (6%)
Query: 3 NNYSK--RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
N +K LGRGL +L+ + + ++ I P + PR +
Sbjct: 9 NTMAKLPGGLGRGLDSLLSGS---------IEDGRGDRLAVAAVGDIRPGRYQPRVQMDD 59
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L +SI++ G+IQP+IVR Y++IAGERR+RAA++A L+++P++++N+ +++
Sbjct: 60 EALHELAESIRAQGVIQPVIVREHGLSQYELIAGERRWRAAQLAGLADIPIVVKNISDET 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+ T I VGKSRS V+N LR+L LP
Sbjct: 120 ALAMGLIENLQRENLNPIEEARGLKRLADEFSLTHETIAKAVGKSRSAVSNSLRLLALPE 179
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++M+ + + +GHAR L++ D L LAQ V SVR+ E+ ++ ++
Sbjct: 180 PVQDMLYRRHLEMGHARALLTLPVVDQLELAQKAVKNGWSVREV-----EKRSRMAQQPA 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ S+ + L + ++ +G+N +K H G+ + ++ E L + LG ++
Sbjct: 235 AEKASKTIHPDIRRLNEALTEALGVNAEVKSHNRRSGRIVLHFDNPEMLDALLERLGVDN 294
>gi|269925621|ref|YP_003322244.1| parB-like partition protein [Thermobaculum terrenum ATCC BAA-798]
gi|269789281|gb|ACZ41422.1| parB-like partition protein [Thermobaculum terrenum ATCC BAA-798]
Length = 282
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 102/297 (34%), Positives = 168/297 (56%), Gaps = 25/297 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K LGRGL ALI + + + D + + I I+ NP+ PR +
Sbjct: 1 MSRP--KGGLGRGLDALIPQTSSTFD-------------NLVHIDQIIANPYQPRGSMDE 45
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L+ L +SIK +GI+QPL+V+ Y++IAG RR AAKMA + +VPV+IR
Sbjct: 46 GRLQSLVESIKQNGILQPLLVQRQG-DHYQLIAGHRRLHAAKMAGVQQVPVVIREARASD 104
Query: 121 SLEI-AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++ + A++EN+QR+DLNP++EA Y +L ++G++ ++I VGKSR VAN LR+L+L
Sbjct: 105 NMLLLALIENLQREDLNPIDEAKAYRELQRKFGFSTDEIAERVGKSRPAVANALRLLELA 164
Query: 180 SSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+EM+ + +IS GHAR L ++ A+++V + +SVR TE+LV+ +
Sbjct: 165 PEVKEMLIQGQISEGHARALLGLRDPQSQINTARLVVERGLSVRQTEQLVKRL-----RD 219
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
S+ + +T LE++ +G +S+ G+ I + + E+L+ I ++
Sbjct: 220 NSGQRSSQAIDPEVTYLEERFRQALGTKVSLSRSRRGGKLVIHFYSEEELQSIYEVI 276
>gi|254509078|ref|ZP_05121181.1| ParB family protein [Vibrio parahaemolyticus 16]
gi|219548011|gb|EED25033.1| ParB family protein [Vibrio parahaemolyticus 16]
Length = 293
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 91/298 (30%), Positives = 178/298 (59%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTET----IPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + ++ +SI+S+ P + PR
Sbjct: 1 MSKRGLGKGLDALLSTSSLAREKQQNALQSQQLSSEGELTDLSINSLKPGVYQPRKDMSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR +++ ++IIAGERR+RAA+ A L +VP +I+NV++++
Sbjct: 61 EALEELAASIESQGIIQPIVVRQVEHDKFEIIAGERRWRAARKAGLKQVPCVIKNVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA+ E+L +E+ T + ++GKSR+ V+NILR+ +L +
Sbjct: 121 AIAMALIENIQREDLNVIEEAVALERLQTEFSLTHQQVADVIGKSRAAVSNILRLNQLEN 180
Query: 181 SVREMIRKE--EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ ++ A + + +AQ + K+++VR TE+LV++ +
Sbjct: 181 DVKGLVSDNLLDMGHARALLALEGEQQIEVAQQVAKKQLTVRQTEQLVKK-----CLQPA 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + + ++ + +L +K+S +G ++I ++ + K + I + +L+ + + L
Sbjct: 236 VEDKNAPQDVEIQELSQKLSVMLGGKVAIVRNPSGKSKVTISLDEPHKLEQLIAKLES 293
>gi|239980795|ref|ZP_04703319.1| ParB-like protein [Streptomyces albus J1074]
gi|291452654|ref|ZP_06592044.1| ParB [Streptomyces albus J1074]
gi|291355603|gb|EFE82505.1| ParB [Streptomyces albus J1074]
Length = 334
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 85/283 (30%), Positives = 150/283 (53%), Gaps = 5/283 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + + + + + SI PNP PR F+ + L +L SIK G++QP+
Sbjct: 30 ETSTRSTAEALPPSPVGAHFAELPLDSITPNPRQPREIFDEDALAELVTSIKEVGLLQPV 89
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + G Y++I GERR+RA + A L +P I+R +++ L A++EN+ R LNPLE
Sbjct: 90 VVRQLSPGRYELIMGERRWRACREAGLEAIPAIVRATEDEKLLLDALLENLHRAQLNPLE 149
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+QL+ ++ T + + +G+SR V+N LR+LKL +V+ + ++ GHAR L
Sbjct: 150 EAAAYDQLLQDFNCTHDQLADRIGRSRPQVSNTLRLLKLAPAVQRRVAAGVLTAGHARAL 209
Query: 200 V---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK--EKRKKIFEGSREKEKYLTDLE 254
+ + + LA IV++ +SVR EE+V +++ R K L++L
Sbjct: 210 LSVEDSEEQERLALRIVAEGLSVRSVEEVVTLMGSRQASPARSKGPRAGSRLSPALSELS 269
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + + L+ I L +
Sbjct: 270 TRLSDRFETRVKVDLGQKKGKIVVEFASMDDLQRILQSLAPEE 312
>gi|261400620|ref|ZP_05986745.1| sulfite reductase flavoprotein, alpha component [Neisseria
lactamica ATCC 23970]
gi|269209706|gb|EEZ76161.1| sulfite reductase flavoprotein, alpha component [Neisseria
lactamica ATCC 23970]
Length = 286
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 102/297 (34%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A LSE+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLSEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQAALQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E I LG
Sbjct: 225 RPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHILKQLG 281
>gi|325129481|gb|EGC52311.1| putative chromosome partitioning protein parB [Neisseria
meningitidis OX99.30304]
Length = 286
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A L+E+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQVALQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E I LG
Sbjct: 225 HPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHILKQLG 281
>gi|261213275|ref|ZP_05927557.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio sp. RC341]
gi|260837549|gb|EEX64252.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio sp. RC341]
Length = 293
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 173/298 (58%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + ++ + +SI ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSTEGELADLSISNLKPGIYQPRKDLSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAAK A L +VP +I+ V++++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRHLSTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA ++L +E+ T + ++GKSR+ V N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNAMEEAQALDRLQNEFSLTHQQVADVIGKSRTTVTNLLRLNQLCD 180
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR ++ + +AQ + K+M+VR TE+LV++
Sbjct: 181 DVKRLLETKQLEMGHARALLMLEGEQQVEIAQQVAKKQMTVRQTEQLVKK-----CLSDP 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ L + +S K+ +SI + N K + I + +L+++ + L
Sbjct: 236 SDAKNVSEDLETQQLSQNLSEKLAAKVSIVRSPNGKSKVTISLDEPHKLELLIAKLQN 293
>gi|254669473|emb|CBA03361.1| chromosome partitioning protein [Neisseria meningitidis alpha153]
gi|261393273|emb|CAX50899.1| putative chromosome partitioning protein ParB [Neisseria
meningitidis 8013]
gi|325127408|gb|EGC50339.1| putative chromosome partitioning protein parB [Neisseria
meningitidis N1568]
gi|325135536|gb|EGC58154.1| putative chromosome partitioning protein parB [Neisseria
meningitidis M0579]
gi|325201418|gb|ADY96872.1| putative chromosome partitioning protein parB [Neisseria
meningitidis M01-240149]
gi|325204895|gb|ADZ00349.1| putative chromosome partitioning protein parB [Neisseria
meningitidis M01-240355]
gi|325207399|gb|ADZ02851.1| putative chromosome partitioning protein parB [Neisseria
meningitidis NZ-05/33]
Length = 286
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A L+E+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQAALQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E I LG
Sbjct: 225 RPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHILKQLG 281
>gi|85709798|ref|ZP_01040863.1| chromosome partitioning protein [Erythrobacter sp. NAP1]
gi|85688508|gb|EAQ28512.1| chromosome partitioning protein [Erythrobacter sp. NAP1]
Length = 328
Score = 135 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 96/284 (33%), Positives = 157/284 (55%), Gaps = 5/284 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + + + I I P P NPR +F+ L++L SI + G+IQP
Sbjct: 44 SDSEVAALQIGSEEAVAASPLKVLPIAKIEPLPGNPRKHFDETALDELAASISTRGVIQP 103
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+IVR G Y+++AGERR+RAA+ A L E+P ++R + + + +A++EN+QR+DLNP+
Sbjct: 104 IIVRPHGAGRYQLVAGERRWRAAQKARLHEIPALVRELSEREVIALALIENLQREDLNPV 163
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y++L + G TQ +I +V KSRSHVAN+ R+L LP V +++ +S+GHAR
Sbjct: 164 EEARAYQRLSGDEGMTQAEIAKMVEKSRSHVANLQRLLGLPEDVLDLVENGRLSMGHARA 223
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE---KRKKIFEGSREKEKYLTDLEK 255
L+ D +LA V+ +SVR+ E+LV+ + K + + + +++
Sbjct: 224 LIGQDDAANLAAKAVNDNLSVREIEKLVRTVSKGVKAGAASAKAHPKAEHENADIVAVQR 283
Query: 256 KISSKVGLNISIKHRN--NKGQFCIKYETNEQLKIICSLLGEND 297
+ +GL + IK G IKY + +QL ++C L D
Sbjct: 284 HLEEFLGLTVRIKADADPKSGAITIKYGSLDQLDMLCQRLTGGD 327
>gi|237735381|ref|ZP_04565862.1| stage 0 sporulation protein J [Mollicutes bacterium D7]
gi|229381126|gb|EEO31217.1| stage 0 sporulation protein J [Coprobacillus sp. D7]
Length = 325
Score = 135 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 102/293 (34%), Positives = 163/293 (55%), Gaps = 13/293 (4%)
Query: 5 YSKRRLGRGLAALIG-EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
++LG+GL A+ G +++ ID EK T Q +S+ I PNP+ PR F+ E L
Sbjct: 38 TKNKKLGKGLDAIFGGDISTLIDDIEKNT--PESKQITVSLEEIRPNPYQPRKLFDEEKL 95
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
++L SIK HG+ QP+I+ Y+I+AGERR RAAK+A L E+P II + ++ +E
Sbjct: 96 QELAISIKEHGVFQPVIL-KKSIQGYEIVAGERRCRAAKIARLVEIPAIIVDFTDQQMME 154
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR++LN +EEA Y+ ++ Q+++ +GKSRS++AN LR+L+LP ++
Sbjct: 155 IALLENIQRENLNSIEEAKAYQMMMERLNLKQDELAKRIGKSRSYIANTLRLLQLPEMIQ 214
Query: 184 EMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ + +I++GHAR L+ SLA + + +SVRD E +V + +
Sbjct: 215 NYVLEGKITMGHARCLITLPQEKAESLAARCIEEGLSVRDVENIV---KGIELGNSRKDR 271
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
EK K +E + K I + + IKY + L I L+G
Sbjct: 272 PKVEKPKEYVYVEGLLRKKFRTKIKVDEKA----VTIKYTDTKDLNRILELMG 320
>gi|332702225|ref|ZP_08422313.1| parB-like partition protein [Desulfovibrio africanus str. Walvis
Bay]
gi|332552374|gb|EGJ49418.1| parB-like partition protein [Desulfovibrio africanus str. Walvis
Bay]
Length = 305
Score = 135 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 99/307 (32%), Positives = 164/307 (53%), Gaps = 28/307 (9%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
R LGRGL AL+G ++SPE + + I PNP PR F GL++L
Sbjct: 6 RGLGRGLDALLGGGKTDLNSPE---------VRMLQLDVIRPNPDQPRTVFSDSGLDELT 56
Query: 68 QSIKSHGIIQPLIVRAID---NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+SIKS G++QP++VR I Y+I+AGERR+RA++ A L+++P +I+ + + SL I
Sbjct: 57 ESIKSQGVLQPILVRPIRGDVEKRYEIVAGERRWRASRKAGLTQIPALIKELSQEESLAI 116
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEA G +L +Q D+ +GKSRS V N LR+L+LP +V+
Sbjct: 117 ALIENLQREDLNPMEEARGLRELQERLSCSQEDLAKKIGKSRSAVTNTLRLLQLPDNVQV 176
Query: 185 MIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK---- 237
+ ++ GH R ++ + + IV ++SVR E + +
Sbjct: 177 DLGNGVLTAGHGRAIMAVTEPEAQEEMRRRIVEGQLSVRQAEAMASWWKKNGSLPELEAG 236
Query: 238 -----KIFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKI 288
K G R+K + L D++K + + G+ ++I +G+ +Y + ++L+
Sbjct: 237 QTLGVKPQAGQRKKGEPMDSTLVDIQKLLCNSYGVKVNISGSQGQGRISFRYSSQDELQR 296
Query: 289 ICSLLGE 295
+ G
Sbjct: 297 LIERFGS 303
>gi|158319049|ref|YP_001511557.1| parB-like partition protein [Frankia sp. EAN1pec]
gi|158114454|gb|ABW16651.1| parB-like partition protein [Frankia sp. EAN1pec]
Length = 309
Score = 135 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 90/261 (34%), Positives = 154/261 (59%), Gaps = 5/261 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I + S+ PNP PR +F+ + + +L S++ G++QP++VR + G Y+++ GERR+R
Sbjct: 48 REIPVDSVTPNPRQPRTHFDEDAIAELAASLREVGLLQPIVVRELLPGRYELVMGERRWR 107
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
A+K+A L VP I+R+ + + L A++EN+ R+ LNPLEEA YEQL+ ++G T ++
Sbjct: 108 ASKLAGLERVPAIVRDTADDAMLRDALLENLHRQQLNPLEEAAAYEQLLRDFGATHEELA 167
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKK 216
+G+SRSHV N +R+L LP +V+ + +S GHAR L+ LA IV++
Sbjct: 168 GRLGRSRSHVTNTIRLLGLPPAVQRRVAAGVLSAGHARALLSLEDPDAQDRLATRIVAEG 227
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQF 276
+SVR EE+V ++ RK+ G R LT + ++S ++ + + +KG+
Sbjct: 228 LSVRAVEEIV--ALGEEGPRKRAPRGPRTTAPALTRIADRLSDRLETRVKVDMGRSKGRI 285
Query: 277 CIKYETNEQLKIICSLLGEND 297
+++ T E L+ I ++ N
Sbjct: 286 TVEFATIEDLERIVEVMSPNS 306
>gi|149917798|ref|ZP_01906293.1| parB-like partition protein [Plesiocystis pacifica SIR-1]
gi|149821318|gb|EDM80720.1| parB-like partition protein [Plesiocystis pacifica SIR-1]
Length = 310
Score = 135 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 105/312 (33%), Positives = 173/312 (55%), Gaps = 18/312 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS + LGRGL++LI E ++ + + I ++ PN PR F+
Sbjct: 1 MSRP-KRPALGRGLSSLIPETPKAP-ASAPAGSAPAGKPRELPIEAVEPNAEQPRKRFDE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN-----GLYKIIAGERRFRAAKMASLSEVPVIIRN 115
+ L +L +SI +HGIIQP++V + Y+I+AGERR+RAA++A L VPV IR
Sbjct: 59 DALAELAESIGTHGIIQPIVVVPLPRVGGAAARYQILAGERRWRAAQLAGLKTVPVFIRE 118
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
LE+A++EN+QR DL+P+EEA Y L+ ++GYTQ ++ S VGK RS +AN LR+
Sbjct: 119 TPEDERLELALIENLQRADLDPIEEAKAYAALLEQHGYTQAELASRVGKQRSTIANGLRL 178
Query: 176 LKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQE---- 228
LKLP+ V+E++ ++ +GHAR L+ SD LA ++ ++ SVR E V++
Sbjct: 179 LKLPAKVQELLIDGQLGMGHARALLGLERESDMRELAAELIRRRWSVRQIEAEVRKRTTA 238
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR---NNKGQFCIKYETNEQ 285
+ E + + + + +LE++I +G+ ++ G + Y+ ++
Sbjct: 239 RKAADEAEPEPDDDRKRHTIIVRNLEERIRRHLGVQAKLRTGRSPKGPGTIELPYKDLDE 298
Query: 286 LKIICS-LLGEN 296
L+ + + LLGE
Sbjct: 299 LQRLLNALLGEG 310
>gi|320531023|ref|ZP_08032055.1| ParB-like partition protein [Selenomonas artemidis F0399]
gi|320136772|gb|EFW28722.1| ParB-like partition protein [Selenomonas artemidis F0399]
Length = 305
Score = 135 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 95/274 (34%), Positives = 155/274 (56%), Gaps = 8/274 (2%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
+ + +SI I PN PR F+ LE+L +SI HGI+QPLIVR I +G Y++
Sbjct: 11 SAGSAGTPALLSIDRIQPNRFQPRREFDEGALEELRESIAQHGILQPLIVRDIGSGAYEL 70
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
IAGERR RAAK+A L+EVP + R + E+A++EN+QR+DLNP+EEA YE+L+ E+
Sbjct: 71 IAGERRLRAAKLAGLTEVPAVFRIAADAELAEMALIENLQREDLNPIEEARAYERLLGEF 130
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSL 208
+Q + V +SRS +AN +R+L+L +SV+ + +S+G R L+ S +
Sbjct: 131 KLSQEQLARRVARSRSAIANSVRLLRLAASVQAFLANGVLSVGQVRPLLALESKTLQSEA 190
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK---EKYLTDLEKKISSKVGLNI 265
A+ I +++ R E LV+ KK ++ + ++ + E++++ +G +
Sbjct: 191 AEYIQEHELTARGVEALVKRLVKDPNALKKTSAAPAQRSAPDIFVREAEERLTRSLGTKV 250
Query: 266 SIKHRN--NKGQFCIKYETNEQLKIICSLLGEND 297
SI+ KG+ I Y + + L+ + LL D
Sbjct: 251 SIRAGREEGKGKLEISYFSADDLERLLGLLTAAD 284
>gi|313893475|ref|ZP_07827045.1| stage 0 sporulation protein J [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441918|gb|EFR60340.1| stage 0 sporulation protein J [Veillonella sp. oral taxon 158 str.
F0412]
Length = 309
Score = 135 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 92/299 (30%), Positives = 157/299 (52%), Gaps = 11/299 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S LG+GL L+ + PEK+ + I +VPN PR F+ +
Sbjct: 7 SKKSKASGLGKGLGNLMKVDSVESVLPEKE-------IHELPISELVPNADQPRKSFDED 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L L +SIK+ GI QP++VR N Y+I+AGERR+RAA +A L VPVI++ + +
Sbjct: 60 SLATLAESIKNLGIFQPIVVRKQKNK-YQIVAGERRYRAAIIAGLETVPVIVKKYNTEEM 118
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
E+A+VEN+QR+ L+P+EEAL Y+ L+ Y TQ I + +G+SRS++AN++R+LKL S
Sbjct: 119 TEVALVENLQREGLDPIEEALAYQGLMDTYKQTQEMISARLGRSRSYIANMVRLLKLCDS 178
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
V++ + + ++++G AR L++ + K + + + K K
Sbjct: 179 VQKDLIEGDLTVGQARPLLALRSAAQQIEAAERIKEGELSARQAEALVKSMQNKSPKTKT 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNK---GQFCIKYETNEQLKIICSLLGEND 297
+ + L ++ +G ++IK R K G+ I + + +L+ + + + D
Sbjct: 239 NKPQSTAEVRALMDRLKLSLGSPVNIKFRAGKKVQGKIEIAFSSEAELERLIAYMDGQD 297
>gi|297588072|ref|ZP_06946716.1| chromosome partitioning protein SpoOJ [Finegoldia magna ATCC 53516]
gi|297574761|gb|EFH93481.1| chromosome partitioning protein SpoOJ [Finegoldia magna ATCC 53516]
Length = 269
Score = 135 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 97/287 (33%), Positives = 158/287 (55%), Gaps = 23/287 (8%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LGRGL ALI T +S I + I+ PR +FE + + +L
Sbjct: 4 KKGLGRGLDALIP--------QNIIETTSSDSIVNIELSKIIRREDQPRTHFEKDKIREL 55
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SIK +G+I P+IVR D+ Y+IIAGERRF A+ A LSE+P I++ +++ E+++
Sbjct: 56 ANSIKEYGVISPIIVRKKDDK-YEIIAGERRFLASLEAGLSEIPAIVKEMEDSEVAEVSL 114
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLN +EEA+ Y+ L+ Y TQ ++ + KSRS++AN LR+L L E +
Sbjct: 115 IENIQREDLNAVEEAVAYKNLMENYNLTQKELADKLSKSRSYIANTLRLLNLDELSLEHL 174
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+K +I+ AR+L++ D + L+ + +KK ++I + S+E
Sbjct: 175 KKGDITSSQARSLLAIDDMKKR--------------KALLDKLLSKKTNVREIEKVSKET 220
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +L DL+ + K + IK + G I+Y +NE L+ I +L
Sbjct: 221 DPFLLDLQNRFLEKFSTKVRIKPKRKGGSIEIEYLSNEDLERIMEIL 267
>gi|294506410|ref|YP_003570468.1| spoOJ protein [Salinibacter ruber M8]
gi|294342738|emb|CBH23516.1| spoOJ protein [Salinibacter ruber M8]
Length = 326
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 101/321 (31%), Positives = 165/321 (51%), Gaps = 33/321 (10%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIP------------------ESQDCISIHSI 47
K LG+GL AL+ E S + + T +++ I
Sbjct: 3 KKSALGKGLNALLPEDQDEQASGDGEGPTDEAPEEQSQLYQFEDGTRLLGRVAEVAVERI 62
Query: 48 VPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLS 107
PNP+ PR FE L++L SI+ GIIQP+ VRA+ +G ++II+GERR RAA+ A +
Sbjct: 63 RPNPYQPRQEFEEGALDELAASIEQIGIIQPITVRALGDGEFEIISGERRLRAARRAGME 122
Query: 108 EVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRS 167
+P IR D++ LE+A+VENVQR++LNP+E ALGY++L+ E TQ ++ V KSR+
Sbjct: 123 HLPAFIREADSEEMLEMALVENVQREELNPIEIALGYQRLVEECDLTQEEVAERVSKSRA 182
Query: 168 HVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEE 224
V+N LR+L+LP ++ +R +++S+GHAR L++ D + + +++ +SVR+ E
Sbjct: 183 TVSNFLRLLRLPPRIQAALRDKQVSMGHARALIAMDDDEAQVALLEETIAEDLSVREVER 242
Query: 225 LVQEQDNKKEKRKK-----------IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-N 272
++ + + +L ++ S+ + I HR
Sbjct: 243 RARQWHEDEGAADSEAAEGADETAVPETAPDRDDLQFEELRNRLRSRFSTQVQIHHRKDG 302
Query: 273 KGQFCIKYETNEQLKIICSLL 293
+G I Y + E L + LL
Sbjct: 303 EGTIEISYYSEEDLNRLVELL 323
>gi|313904714|ref|ZP_07838088.1| parB-like partition protein [Eubacterium cellulosolvens 6]
gi|313470507|gb|EFR65835.1| parB-like partition protein [Eubacterium cellulosolvens 6]
Length = 354
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 104/278 (37%), Positives = 173/278 (62%), Gaps = 5/278 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+S D E+K ++ E+ + + IVPN PR F E + +L SI+ HGI+QPL
Sbjct: 79 NAAKSSDHTERKDDSSGENGMNLRLSQIVPNKDQPRKDFPEESIAELANSIRQHGILQPL 138
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+V+ Y+I+AGERR+RAAK A L EVPVIIR + ++EI+++EN+QR+DLN +E
Sbjct: 139 LVQKSG-KYYEIVAGERRWRAAKEAGLKEVPVIIRTFSEQEAMEISLIENIQREDLNAIE 197
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y++L+ E+ TQ + VGKSR+ + N +R+LKL VR ++ +++GHAR L
Sbjct: 198 EAEAYKRLMDEFELTQEAVAEKVGKSRTTITNAIRLLKLAGPVRHLLLNGSLTMGHARAL 257
Query: 200 V---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ + + + V+V KK+SVR+TE++V++ + ++K K + + + L +LE++
Sbjct: 258 LALEDEEEQIRASHVVVQKKLSVRETEKMVRQILHPRKKAAKPEDDEQLRLA-LKELEER 316
Query: 257 ISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ +G +SI+ R KG+ I+Y + E L+ I ++G
Sbjct: 317 MGKHMGTKVSIQPRGEKGKIEIEYYSQEDLERILDIIG 354
>gi|294788148|ref|ZP_06753391.1| putative ParB family protein [Simonsiella muelleri ATCC 29453]
gi|294483579|gb|EFG31263.1| putative ParB family protein [Simonsiella muelleri ATCC 29453]
Length = 290
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 103/297 (34%), Positives = 171/297 (57%), Gaps = 15/297 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ SK LGRGL ALI S D E + + I I P + R +
Sbjct: 1 MA-IKSKGGLGRGLDALISISPASYD------EESGDRLTTLPIADITPGKYQARVQMDD 53
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L DL +SI++ G+IQP+IVR LY++IAGERR+RAA++A L+E+PV+I+NVD++S
Sbjct: 54 AALTDLAESIRAQGVIQPVIVREQGGQLYELIAGERRWRAAQLAGLTEIPVVIKNVDDRS 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ + ++EN+QR++LNP+EEA G ++LI E+ T + +G+SRS ++N LR+LKLP
Sbjct: 114 TMAMGLIENMQRENLNPIEEAQGLKRLIDEFELTHETVAEAIGRSRSSISNSLRLLKLPE 173
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++++ K + +GHAR L + ++ L LA V SVR+ E ++ K
Sbjct: 174 PVQDLLFKRHLEMGHARALLSLPVAEQLDLAHKAVKNGWSVREMERR-----SQSLMTGK 228
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQLKIICSLLG 294
E ++ + + L + ++G+ IK R+ K G+ + ++ + +++ LG
Sbjct: 229 KTETTKRIDPDVNRLTDALIQQIGVAAEIKTRDRKRGKIILNFDNADTFEMLMKKLG 285
>gi|212703771|ref|ZP_03311899.1| hypothetical protein DESPIG_01819 [Desulfovibrio piger ATCC 29098]
gi|212672739|gb|EEB33222.1| hypothetical protein DESPIG_01819 [Desulfovibrio piger ATCC 29098]
Length = 337
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 95/312 (30%), Positives = 159/312 (50%), Gaps = 23/312 (7%)
Query: 5 YSKRRLGRGLAALI-----GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
S + LGRGL AL+ G Q + +K S + + + NP PR F+
Sbjct: 1 MSSKGLGRGLDALLRRTDMGAARQEKNDTPEKETGTEHSPTLLPLSHLHANPSQPRQTFD 60
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+E L +L SI+ GIIQPL+VR G Y+I+AGERR+RAA+ A L +VPV +R +
Sbjct: 61 AESLAELAASIREQGIIQPLLVRPLADRPGHYQIVAGERRWRAARQAGLGQVPVHVREMS 120
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+ + A++EN+QR+DLNP+EEA +QL TQ + + +GKSR +AN LR+L+
Sbjct: 121 DAEVMAAALIENLQREDLNPMEEAQALQQLRETLKLTQEALAARLGKSRPAIANALRLLQ 180
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLA-------QVIVSKKMSVRDTEELVQEQD 230
L + + + +S GHAR L++ + I+S+ +SVR EE V
Sbjct: 181 LSPAAQGDLHHGRLSAGHARCLLALGNDDRALAAAEVLRSHIISESLSVRQAEEAVALWR 240
Query: 231 NKKE---------KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYE 281
++ +++ R+K + L+K + + + + G+ ++Y
Sbjct: 241 EEQRLPWTTASEAAQQRPAPCKRKKLPQIAALQKSLCAALPCKARVSGDMESGRITLRYN 300
Query: 282 TNEQLKIICSLL 293
+ ++L+ + + L
Sbjct: 301 SPQELEALLNRL 312
>gi|254438379|ref|ZP_05051873.1| ParB-like nuclease domain family [Octadecabacter antarcticus 307]
gi|198253825|gb|EDY78139.1| ParB-like nuclease domain family [Octadecabacter antarcticus 307]
Length = 278
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 110/280 (39%), Positives = 165/280 (58%), Gaps = 6/280 (2%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
++ E + + I PNP PR F+ + ++DL SI GIIQPLI
Sbjct: 1 MSDVSTPTETDKSVTNRTDQSLPTDQIYPNPEQPRRTFDDKAMDDLTASITEKGIIQPLI 60
Query: 81 VRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
VR +G Y+I+AGERR+RAA+ A L +VPVIIR + LE+AI+EN+QR DL+ +
Sbjct: 61 VRRKPSGNGTYEIVAGERRWRAAQRAQLHQVPVIIREFTDVEVLEVAIIENIQRSDLSAI 120
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
+EA GY+QL+ ++G TQ D+G +GKSRSH+AN +R+L LP+SV+ +++ +S GHART
Sbjct: 121 DEAAGYKQLMEKFGRTQEDMGKALGKSRSHIANSVRLLTLPASVQSLLQNGRLSAGHART 180
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
LV +D +A IV K +SVRD E+L + N ++ + K+ +E +S
Sbjct: 181 LVGHTDADKIATEIVKKGLSVRDAEKLAKTSKN--PTKRAASGKTVAKDADTVQIENDLS 238
Query: 259 SKVGLNISIKHRNNK--GQFCIKYETNEQLKIICSLLGEN 296
+ +GL ++I H + GQ + Y EQL + +L N
Sbjct: 239 AHLGLKVNIAHAAGRENGQVVLNYRDLEQLDDLLRVLSGN 278
>gi|296313928|ref|ZP_06863869.1| sulfite reductase flavoprotein, alpha component [Neisseria
polysaccharea ATCC 43768]
gi|296839466|gb|EFH23404.1| sulfite reductase flavoprotein, alpha component [Neisseria
polysaccharea ATCC 43768]
Length = 286
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 100/297 (33%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A L+E+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLAEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIARAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQMAHQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E + LG
Sbjct: 225 RPEPKKPAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHLLEQLG 281
>gi|300779353|ref|ZP_07089211.1| chromosome partitioning protein SpoOJ [Chryseobacterium gleum ATCC
35910]
gi|300504863|gb|EFK36003.1| chromosome partitioning protein SpoOJ [Chryseobacterium gleum ATCC
35910]
Length = 296
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 10/299 (3%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSI--DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
KR +GRGL A++ +++ + ++ + + +++ I PNP PR YF+
Sbjct: 1 MKDKKRAMGRGLGAILSAESKATINSATDEGADKFVGNIVEVALEDIYPNPTQPRTYFDE 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L +L QSIK+ G+IQ I D ++II+GERR+RA K+A L+ +P IR V+++
Sbjct: 61 KALNELAQSIKNLGVIQ-PITLRKDGEKFEIISGERRYRATKIAGLTTIPAYIRLVNDQE 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A+VEN+QR+DL+ +E AL Y +L+ E G TQ + VGK RS + N +R+L+L
Sbjct: 120 LLEMALVENIQREDLDAIEIALTYHRLLEEIGLTQETLSQRVGKDRSTITNSIRLLRLNP 179
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ IR EIS GH R ++ S D L +I+ +K++VR E+ N K
Sbjct: 180 DIQNAIRSGEISAGHGRAIISLESEEDQQVLFDLIIKEKLNVRQAEQAAAALKNPKSPAA 239
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK--HRNNKGQFCIKYETNEQLKIICSLLG 294
K + E +K I+ + + + IK KG+ + ++ E+L+ I S +
Sbjct: 240 K--KAKVELSNNYKKAQKTIADILDVKVEIKASGNGKKGKIVLDFKNEEELEYILSHIK 296
>gi|326383901|ref|ZP_08205585.1| parB-like partition protein [Gordonia neofelifaecis NRRL B-59395]
gi|326197360|gb|EGD54550.1| parB-like partition protein [Gordonia neofelifaecis NRRL B-59395]
Length = 349
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 91/286 (31%), Positives = 152/286 (53%), Gaps = 10/286 (3%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ +E I IS I PNP PR F+ E L +L SI+ G++QP++
Sbjct: 61 TEVAAVDAASASEEIGAVYREISPADIEPNPKQPRTVFDEEALFELEHSIREFGLMQPIV 120
Query: 81 VRAIDNG-----LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
VR + + Y++I GERR+RA L +P I+R + L A++EN+ R L
Sbjct: 121 VRELPSPGAGGAHYQLIMGERRWRAGTNVGLETIPAIVRETPDGDLLRDALLENIHRAQL 180
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
NPLEEA Y+QL+ E+ T ++ + +G+SR + N++R+LKLP V+ + +S GH
Sbjct: 181 NPLEEAAAYQQLLEEFEVTHEELATRLGRSRPVITNMIRLLKLPIPVQRRVAAGVLSAGH 240
Query: 196 ARTLVS----TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE-KYL 250
AR L++ T +LA IV++ +SVR TEE V + + K + R E L
Sbjct: 241 ARALLALEAGTDAQEALAARIVAEGLSVRATEEAVTLANRDGFEEKPEQKKRRPIEMPGL 300
Query: 251 TDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
D+ ++S ++ +++ KG+ I++ + + L+ I +++ EN
Sbjct: 301 QDVANRLSDRLDTKVTVSLGKKKGRVSIEFGSVDDLERIVNVIAEN 346
>gi|326692157|ref|ZP_08229162.1| chromosome partitioning protein ParB [Leuconostoc argentinum KCTC
3773]
Length = 299
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 89/278 (32%), Positives = 157/278 (56%), Gaps = 10/278 (3%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E K + E + +++ I PNP PR++F++ L +L +SIK+ G++ P+
Sbjct: 23 EEALEHTKSVTKKASDTEQVEGLALDKITPNPFQPRHHFDAAKLNELAKSIKASGVLTPI 82
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
IVR Y+IIAGERR RA+K+A L+ + I+R VD+++ +A++EN+QR DL+ +E
Sbjct: 83 IVRRSGRE-YQIIAGERRVRASKLAGLTTISAIVRTVDDETMAAVALIENLQRDDLDAIE 141
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+ L+++ TQ + VGK R+ VAN +R+L LP+SV+++++ E+S+G AR +
Sbjct: 142 EAQAYQALMTQLQLTQAQVAEKVGKERTTVANAVRLLNLPTSVQDLVQAGELSMGQARAI 201
Query: 200 ---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ S A ++V++++SVR E LV++ + + + Y+ + +
Sbjct: 202 LGLKAKSQIEKTAALVVARQLSVRQVEALVKQMNAGASD-----KPEKVVSPYVVAIASQ 256
Query: 257 ISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ K G + + G+ I Y +N+ L I LL
Sbjct: 257 LEEKFGTKVKVNAGAKGNGKIEINYVSNDDLNRILDLL 294
>gi|239904654|ref|YP_002951392.1| chromosome partitioning protein ParB [Desulfovibrio magneticus
RS-1]
gi|239794517|dbj|BAH73506.1| chromosome partitioning protein ParB [Desulfovibrio magneticus
RS-1]
Length = 308
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 94/306 (30%), Positives = 158/306 (51%), Gaps = 24/306 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +++ LGRGL AL+G ++ SP + + + I NP PR F
Sbjct: 1 MA--QAQKGLGRGLEALLGGFGEADASPSE--------VRLLPLDDIRANPEQPRRTFSE 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRA---IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E L +L SI+ G++QP++VR ++I+AGERR+RAA+ A L+E+P ++R VD
Sbjct: 51 ESLAELAASIREQGLLQPVLVRPVPGHGRHSHEIVAGERRWRAARQAGLTEIPALVREVD 110
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+++ +A+VEN+QR+DLNP+EEA GY+ L+S YG +Q + + VGKSRS VAN LR+
Sbjct: 111 DETGFALALVENLQREDLNPMEEAAGYQLLVSRYGLSQEAVAAKVGKSRSAVANSLRLTT 170
Query: 178 LPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L +VR + +++ GHAR +L +L + +V +SVR+ E
Sbjct: 171 LDEAVRADLAAGKLTAGHARALLSLPEGELRDALWRRVVDNGISVREAEAAATYAKTHGH 230
Query: 235 KR--------KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
+ + L LE ++ + G+ + + G+ + + +L
Sbjct: 231 LPEAGAMADAPRKRGPKPVPDARLKGLEAVLTERAGVLVKTTGSADHGRLTFHFSSRREL 290
Query: 287 KIICSL 292
+ +
Sbjct: 291 EGLLER 296
>gi|171056889|ref|YP_001789238.1| parB-like partition protein [Leptothrix cholodnii SP-6]
gi|170774334|gb|ACB32473.1| parB-like partition protein [Leptothrix cholodnii SP-6]
Length = 302
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 177/304 (58%), Gaps = 17/304 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+G + + + + + P + PR + L
Sbjct: 4 KKPKGLGRGLEALLG----PQVGVDTDSNGGQPQPSAVKLAQLQPGRYQPRTRMDEGALF 59
Query: 65 DLCQSIKSHGIIQPLIVRAIDN----GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+L +SIK+ G++QP++VR +D +Y+IIAGERR RAA++A L EVPV++R+V +++
Sbjct: 60 ELAESIKAQGVMQPILVRPVDARDGLPMYEIIAGERRSRAARLAGLDEVPVLVRDVPDQT 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++LISE+G T + +G+SRS +N+LR+L L
Sbjct: 120 AAAMALIENIQREDLNPLEEAQGVQRLISEFGLTHEEAAQAIGRSRSATSNLLRLLNLAD 179
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++++ ++ +GHAR L+ + A IV++K+SVR+ E+LV Q++ ++
Sbjct: 180 PVQQLLMAGDLDMGHARALLPLERVHQITGAHEIVARKLSVREAEKLVSRQES--ARQAP 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-----HRNNKGQFCIKYETNEQLKIICSLL 293
+ +K + L +E++++ + + I+ R +G+ I + + ++L + L
Sbjct: 238 LLRMKADKSRDLIRIEEQLADALTAAVEIRVRKRTKRGEQGEIAIAFGSLDELNGLLDKL 297
Query: 294 GEND 297
G ++
Sbjct: 298 GLSE 301
>gi|255657628|ref|ZP_05403037.1| stage 0 sporulation protein J [Clostridium difficile QCD-23m63]
gi|296452691|ref|ZP_06894382.1| chromosome partitioning protein SpoOJ [Clostridium difficile NAP08]
gi|296880057|ref|ZP_06904026.1| chromosome partitioning protein SpoOJ [Clostridium difficile NAP07]
gi|296258473|gb|EFH05377.1| chromosome partitioning protein SpoOJ [Clostridium difficile NAP08]
gi|296428924|gb|EFH14802.1| chromosome partitioning protein SpoOJ [Clostridium difficile NAP07]
Length = 287
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 110/294 (37%), Positives = 169/294 (57%), Gaps = 10/294 (3%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M N + RLGRGL+ALI E+ K ET + I I I PN PR F+
Sbjct: 1 MENKSKRSNRLGRGLSALIPEI---------KGETPEKEIVNIDIDKIYPNEVQPRKQFD 51
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E ++ L SIK++G++QP++V+ +N Y IIAGERRFRA+K+A+ +++P II+++D K
Sbjct: 52 EEKIKVLADSIKNYGVLQPIVVKMDENNKYMIIAGERRFRASKLANKNQIPAIIKDIDMK 111
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+EIA++EN+QR+DLN +EEAL Y+ LI Y TQ +I VGKSR H+ N LR+L L
Sbjct: 112 DIMEIALIENLQREDLNSIEEALAYKSLIEHYNVTQEEISEAVGKSRPHITNTLRLLNLG 171
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V EMI I+ GH + L+ +D Q+ + E+ E +++
Sbjct: 172 QDVIEMIDSGRITAGHGKALLRIADKDLQLQIAKKIEEEELSVREVENIAKKISENKQEE 231
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ S+ K+ ++ D+E K+ + G ++I KG+ I+Y ++ L I S+L
Sbjct: 232 PKKSKPKDVFILDVEDKLRNIFGTKVNISKGKKKGKIEIEYYNDDDLNSIVSML 285
>gi|227498812|ref|ZP_03928952.1| stage 0 sporulation protein J [Acidaminococcus sp. D21]
gi|226904264|gb|EEH90182.1| stage 0 sporulation protein J [Acidaminococcus sp. D21]
Length = 326
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 98/316 (31%), Positives = 165/316 (52%), Gaps = 32/316 (10%)
Query: 6 SKRRLGR-GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SKR LG+ GL + K E+ +++ +++PNP+ PR+ F+ + LE
Sbjct: 3 SKRGLGKNGLDVMF-----EPVKKVVKERQAGENVGELAVKNLIPNPYQPRHTFDEKALE 57
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QS++ GIIQPLIVR Y+I+AGERR+RAAK A L +VPV+IR+ D+ + +E+
Sbjct: 58 ELTQSVQESGIIQPLIVRKKGRT-YEIVAGERRWRAAKAAGLVKVPVVIRDYDDATMMEV 116
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR DL+P+EEA G + ++ TQ + +G SR+ +AN LR+LKLP +
Sbjct: 117 ALVENMQRSDLDPIEEARGIKNMMDALKVTQEEAAKRLGMSRAALANSLRLLKLPEGAAQ 176
Query: 185 MIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD---------NK 232
++ ++++ G R L LA + S R EE V + K
Sbjct: 177 LVTDKKLTAGQVRPLLSLTDPQQIDKLALRAAEEGWSARMVEEYVTSEKEGLSEKEQAEK 236
Query: 233 KEKRKKIFEGSREKEK-----------YLTDLEKKISSKVGLNISIK--HRNNKGQFCIK 279
E ++ G + K+K Y+ +++ ++ G + ++ + + G+ I+
Sbjct: 237 LEAQQTAKNGKKAKDKARRSVKESQSIYVKAIQEDLTQYFGTKVKVQPDKKEHGGRIVIE 296
Query: 280 YETNEQLKIICSLLGE 295
Y L+ + LL +
Sbjct: 297 YYNEGDLERVMELLKK 312
>gi|187734646|ref|YP_001876758.1| parB-like partition protein [Akkermansia muciniphila ATCC BAA-835]
gi|187424698|gb|ACD03977.1| parB-like partition protein [Akkermansia muciniphila ATCC BAA-835]
Length = 294
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 99/294 (33%), Positives = 159/294 (54%), Gaps = 4/294 (1%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K LG+G ALI NQ++ + +S +I+P+ PR F E L
Sbjct: 1 MAKPALGKGFDALI---NQNLSRESLAAPQAGDVVHQLSHAAIIPSSLQPRAIFTPEQLA 57
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SIK HGIIQPLIVR + Y++IAGERR+RA+ + LS VP IIR +K LE+
Sbjct: 58 ELVDSIKEHGIIQPLIVRKTQSDKYELIAGERRWRASGILGLSTVPAIIREASDKDVLEL 117
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR++L+PLEEA GY +L +E+ Q DI VGKSR+ VAN +R+L LP V++
Sbjct: 118 ALIENLQRENLSPLEEAAGYMRLKTEFRMKQGDIAKRVGKSRAAVANSMRLLDLPQPVQD 177
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
M+ IS+GHA+ L+S + + ++ T ++ K + +
Sbjct: 178 MLGNTFISVGHAKVLLSLKNKDQQ-IQLGRDIVNKGYTVRQTEKAIQKMLNPPEPAPVKK 236
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
+ ++ + G ++I + ++G I + + + I LLG++++
Sbjct: 237 PSSPQYKKISSILAKQFGTPVNISGQGSRGAIEITFSSKAEFIRILELLGQDEW 290
>gi|254452237|ref|ZP_05065674.1| chromosome partitioning protein [Octadecabacter antarcticus 238]
gi|198266643|gb|EDY90913.1| chromosome partitioning protein [Octadecabacter antarcticus 238]
Length = 278
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 113/283 (39%), Positives = 166/283 (58%), Gaps = 9/283 (3%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +VN +++P+ + + PNP PR F+ + ++DL SI GIIQ
Sbjct: 1 MSDVNTPLEAPKSALNPTD---QTLPTDQVYPNPDQPRRTFDDQAMDDLTASIAEKGIIQ 57
Query: 78 PLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
PLIVR + Y+I+AGERR+RAA+ A L VPVIIR + LE+AI+EN+QR DL
Sbjct: 58 PLIVRRKPSENGSYEIVAGERRWRAAQRAQLHVVPVIIREFTDLEVLEVAIIENIQRSDL 117
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
N ++EA GY+QL+ ++G TQ D+G +GKSRSH+AN++R+L LP+SV+ ++ +S GH
Sbjct: 118 NAIDEAAGYKQLMEKFGRTQEDMGKALGKSRSHIANLVRLLTLPASVQSFLQNGTLSAGH 177
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
ARTLV D LA IV K +SVRD E+L + N K+ + K+ +E
Sbjct: 178 ARTLVGHPDADKLAAEIVKKGLSVRDAEKLAKTSKN--PKKSPNSAETVTKDADTVQIEN 235
Query: 256 KISSKVGLNISIKH--RNNKGQFCIKYETNEQLKIICSLLGEN 296
+S+ +GL ++I H GQ + Y EQL + LL +
Sbjct: 236 DLSAHLGLKVNIAHVTGRENGQVVLNYRDLEQLDDLLRLLSGS 278
>gi|116493451|ref|YP_805186.1| chromosome segregation DNA-binding protein [Pediococcus pentosaceus
ATCC 25745]
gi|116103601|gb|ABJ68744.1| chromosome segregation DNA-binding protein [Pediococcus pentosaceus
ATCC 25745]
Length = 283
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 101/272 (37%), Positives = 162/272 (59%), Gaps = 6/272 (2%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI--DN 86
E+ + I I I PNP PR+ F+ + LE+L +SIK GI QPLI+R
Sbjct: 8 EQLNTQNDATYQMIDITKIYPNPFQPRHIFDKDRLEELAKSIKKSGIYQPLILRQPIAAL 67
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
Y+IIAGERR+RA+ +A L ++P IIRN +++++E AI+EN+QR+DL+PLEEA Y+
Sbjct: 68 ERYEIIAGERRYRASMLAGLEQIPAIIRNFSDEATMEAAIIENLQREDLSPLEEAEAYQA 127
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
+I E TQ + +GKSR ++AN LR+L LP+ V+ M+++ IS+G ARTL++ P
Sbjct: 128 MIKELNLTQAQVSERLGKSRPYIANYLRLLGLPTGVKLMLQEGRISMGQARTLLAIKQPQ 187
Query: 207 ---SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
LAQ V + ++VR EE+V + + K++ + + K ++ +LE ++ + G
Sbjct: 188 ALEKLAQRTVEEGLTVRQLEEIVTKFNLDKDREAAQKQKRKNKSPFIRELENQLGERFGT 247
Query: 264 NI-SIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ KG+ I Y++ ++L I +L
Sbjct: 248 RALVVAKSKQKGKIEINYDSIQELDRILDVLN 279
>gi|258622942|ref|ZP_05717957.1| Probable chromosome-partitioning protein parB [Vibrio mimicus
VM573]
gi|262166770|ref|ZP_06034507.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio mimicus VM223]
gi|258584725|gb|EEW09459.1| Probable chromosome-partitioning protein parB [Vibrio mimicus
VM573]
gi|262026486|gb|EEY45154.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio mimicus VM223]
Length = 293
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 174/298 (58%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + ++ + +SI ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSTEGELADLSISNLKPGIYQPRKDLSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAAK A L +VP +I+ V++++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRHLSTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNAMEEAQALERLQNEFSLTHQQVAEVIGKSRTTVTNLLRLNQLSD 180
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR ++ + +AQ + K+M+VR TE+LV++
Sbjct: 181 DVKRLLETKQLEMGHARALLMLEGEQQVEVAQQVAKKQMTVRQTEQLVKK-----CLTDP 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ + + + +S K+ +SI + N K + I + +L+++ + L
Sbjct: 236 SDTKNVSEDLEIQQMSQNLSEKLAAKVSIVRSPNGKSKVTISLDEPHKLELLIAKLQN 293
>gi|59802438|ref|YP_209150.1| putative chromosome segregation protein [Neisseria gonorrhoeae FA
1090]
gi|194100102|ref|YP_002003242.1| putative chromosome segregation protein [Neisseria gonorrhoeae
NCCP11945]
gi|239998090|ref|ZP_04718014.1| putative chromosome segregation protein [Neisseria gonorrhoeae
35/02]
gi|240013271|ref|ZP_04720184.1| putative chromosome segregation protein [Neisseria gonorrhoeae
DGI18]
gi|240015719|ref|ZP_04722259.1| putative chromosome segregation protein [Neisseria gonorrhoeae
FA6140]
gi|240079854|ref|ZP_04724397.1| putative chromosome segregation protein [Neisseria gonorrhoeae
FA19]
gi|240112063|ref|ZP_04726553.1| putative chromosome segregation protein [Neisseria gonorrhoeae
MS11]
gi|240114808|ref|ZP_04728870.1| putative chromosome segregation protein [Neisseria gonorrhoeae
PID18]
gi|240117010|ref|ZP_04731072.1| putative chromosome segregation protein [Neisseria gonorrhoeae
PID1]
gi|240120343|ref|ZP_04733305.1| putative chromosome segregation protein [Neisseria gonorrhoeae
PID24-1]
gi|240122648|ref|ZP_04735604.1| putative chromosome segregation protein [Neisseria gonorrhoeae
PID332]
gi|240124835|ref|ZP_04737721.1| putative chromosome segregation protein [Neisseria gonorrhoeae
SK-92-679]
gi|240127351|ref|ZP_04740012.1| putative chromosome segregation protein [Neisseria gonorrhoeae
SK-93-1035]
gi|254492872|ref|ZP_05106043.1| chromosome segregation protein [Neisseria gonorrhoeae 1291]
gi|260441378|ref|ZP_05795194.1| putative chromosome segregation protein [Neisseria gonorrhoeae
DGI2]
gi|268593942|ref|ZP_06128109.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268595998|ref|ZP_06130165.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268598121|ref|ZP_06132288.1| chromosome segregation protein [Neisseria gonorrhoeae MS11]
gi|268600463|ref|ZP_06134630.1| chromosome segregation protein [Neisseria gonorrhoeae PID18]
gi|268602695|ref|ZP_06136862.1| chromosome segregation protein [Neisseria gonorrhoeae PID1]
gi|268681246|ref|ZP_06148108.1| chromosome segregation protein [Neisseria gonorrhoeae PID332]
gi|268683415|ref|ZP_06150277.1| chromosome segregation protein [Neisseria gonorrhoeae SK-92-679]
gi|268685723|ref|ZP_06152585.1| chromosome segregation protein [Neisseria gonorrhoeae SK-93-1035]
gi|291044736|ref|ZP_06570445.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|293397833|ref|ZP_06642039.1| chromosome-partitioning protein parB [Neisseria gonorrhoeae F62]
gi|59719333|gb|AAW90738.1| putative chromosome segregation protein [Neisseria gonorrhoeae FA
1090]
gi|193935392|gb|ACF31216.1| putative chromosome segregation protein [Neisseria gonorrhoeae
NCCP11945]
gi|226511912|gb|EEH61257.1| chromosome segregation protein [Neisseria gonorrhoeae 1291]
gi|268547331|gb|EEZ42749.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268549786|gb|EEZ44805.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268582252|gb|EEZ46928.1| chromosome segregation protein [Neisseria gonorrhoeae MS11]
gi|268584594|gb|EEZ49270.1| chromosome segregation protein [Neisseria gonorrhoeae PID18]
gi|268586826|gb|EEZ51502.1| chromosome segregation protein [Neisseria gonorrhoeae PID1]
gi|268621530|gb|EEZ53930.1| chromosome segregation protein [Neisseria gonorrhoeae PID332]
gi|268623699|gb|EEZ56099.1| chromosome segregation protein [Neisseria gonorrhoeae SK-92-679]
gi|268626007|gb|EEZ58407.1| chromosome segregation protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011630|gb|EFE03626.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291611779|gb|EFF40848.1| chromosome-partitioning protein parB [Neisseria gonorrhoeae F62]
gi|317165534|gb|ADV09075.1| putative chromosome segregation protein [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 286
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 103/297 (34%), Positives = 167/297 (56%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTAVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A LSE+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLSEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
SV+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 SVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQAALQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E I LG
Sbjct: 225 RPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGKIILHFDTPETFDHILKQLG 281
>gi|288921192|ref|ZP_06415478.1| parB-like partition protein [Frankia sp. EUN1f]
gi|288347399|gb|EFC81690.1| parB-like partition protein [Frankia sp. EUN1f]
Length = 307
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 92/279 (32%), Positives = 157/279 (56%), Gaps = 5/279 (1%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ S D I + S+ PNP PRN+F+ + L +L +S+K G++QP++V
Sbjct: 28 SMSADRGYAPAPVAGAVFREIPLDSVTPNPRQPRNHFDEDALAELAESLKEVGLLQPIVV 87
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
R + G Y+++ GERR+RA+++A L +VP I+R + + L A++EN+ R+ LNPLEEA
Sbjct: 88 RELLPGRYELVMGERRWRASRLAGLDQVPAIVRETADDAMLRDALLENLHRQQLNPLEEA 147
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV- 200
YEQL+ ++G T ++ +G+SRSHV N +R+L LP +V+ + +S GHAR L+
Sbjct: 148 AAYEQLLRDFGATHEELAGRLGRSRSHVTNTIRLLGLPPAVQRRVAAGVLSAGHARALLS 207
Query: 201 --STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
LA IV++ +SVR EE+V ++ RK+ R LT + +++
Sbjct: 208 LDDADAQDRLATRIVAEGLSVRAVEEIV--ALGEEGPRKRAPRKPRSPVPALTQIADRLA 265
Query: 259 SKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++ + + NKG+ +++ T E L+ I + +
Sbjct: 266 DRLETRVKVDMGRNKGRITVEFATLEDLERIVEAMSPDS 304
>gi|304385712|ref|ZP_07368056.1| chromosome partitioning protein SpoOJ [Pediococcus acidilactici DSM
20284]
gi|304328216|gb|EFL95438.1| chromosome partitioning protein SpoOJ [Pediococcus acidilactici DSM
20284]
Length = 282
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 94/267 (35%), Positives = 157/267 (58%), Gaps = 7/267 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKI 91
S + + I PNP PR F+ + L +L SI+ GI QPL++R Y+I
Sbjct: 13 PENASYQMVEVDKIRPNPFQPRRIFDKKKLAELADSIRESGIFQPLVLRQPIAAIERYEI 72
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
IAGERR+RA+ +A L++VP IIR+ ++++ E AIVEN+QR+DL+PLEEA Y+ +I E
Sbjct: 73 IAGERRYRASIIAGLTKVPAIIRDFSDETTREAAIVENLQREDLSPLEEAEAYQAMIQEL 132
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSL 208
G TQ + +GKSR ++AN LR+L LP+ V+++++ ++S+G ART L +
Sbjct: 133 GLTQAQVSQRLGKSRPYIANYLRLLGLPTMVKQLLQDGKLSMGQARTLLGLKQERQLEQM 192
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN-ISI 267
AQ V + ++VR E +V + N + +K R + ++ ++E +++ ++G + +
Sbjct: 193 AQRTVKENLTVRQLEAMVNQI-NAAKTKKAKKLPQRRRSPFVREIENQLAERLGTKAVVL 251
Query: 268 KHRNNKGQFCIKYETNEQLKIICSLLG 294
+ KG+ I YE+ + L I +L
Sbjct: 252 EKSKQKGKIEIDYESMQDLDRILEILN 278
>gi|259508322|ref|ZP_05751222.1| ParB family protein [Corynebacterium efficiens YS-314]
gi|259164090|gb|EEW48644.1| ParB family protein [Corynebacterium efficiens YS-314]
Length = 297
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 89/275 (32%), Positives = 155/275 (56%), Gaps = 5/275 (1%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
+ + + S I I SIVPNPH PR+ F++E L++L SI+ G++QP++VR
Sbjct: 18 AAEGAEDASISEFGASYQEIPIDSIVPNPHQPRSVFDTEALDELVHSIREFGLMQPIVVR 77
Query: 83 AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
+G +++I GERR RA++ A L +P I+R D+ + L A++EN+ R LNPLEEA
Sbjct: 78 PSGDG-FELIMGERRLRASRRAGLEFIPAIVRETDDSAMLRDALLENIHRVQLNPLEEAA 136
Query: 143 GYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS- 201
Y+QL+ E+G TQ ++ +G+SR + N++R+L LP +V+ + +S GHAR ++
Sbjct: 137 AYQQLLEEFGVTQAELADKLGRSRPVITNMIRLLNLPVNVQTKVAAGVLSAGHARAILGL 196
Query: 202 ---TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
+LA I+++ +SVR TEELV + +++ KK + T + ++
Sbjct: 197 KGGEEAQDALASRIIAEGLSVRATEELVLLSNRGEDEEKKPPREKAPTPEVFTRAAEYLA 256
Query: 259 SKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +S+ KG+ +++ + + I L+
Sbjct: 257 DNLDTKVSVTMGKRKGRLVVEFGDQDDFERIMGLI 291
>gi|25029497|ref|NP_739551.1| putative chromosome partitioning protein ParB [Corynebacterium
efficiens YS-314]
gi|23494786|dbj|BAC19751.1| putative chromosome partitioning protein ParB [Corynebacterium
efficiens YS-314]
Length = 390
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 89/275 (32%), Positives = 155/275 (56%), Gaps = 5/275 (1%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
+ + + S I I SIVPNPH PR+ F++E L++L SI+ G++QP++VR
Sbjct: 111 AAEGAEDASISEFGASYQEIPIDSIVPNPHQPRSVFDTEALDELVHSIREFGLMQPIVVR 170
Query: 83 AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
+G +++I GERR RA++ A L +P I+R D+ + L A++EN+ R LNPLEEA
Sbjct: 171 PSGDG-FELIMGERRLRASRRAGLEFIPAIVRETDDSAMLRDALLENIHRVQLNPLEEAA 229
Query: 143 GYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS- 201
Y+QL+ E+G TQ ++ +G+SR + N++R+L LP +V+ + +S GHAR ++
Sbjct: 230 AYQQLLEEFGVTQAELADKLGRSRPVITNMIRLLNLPVNVQTKVAAGVLSAGHARAILGL 289
Query: 202 ---TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
+LA I+++ +SVR TEELV + +++ KK + T + ++
Sbjct: 290 KGGEEAQDALASRIIAEGLSVRATEELVLLSNRGEDEEKKPPREKAPTPEVFTRAAEYLA 349
Query: 259 SKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +S+ KG+ +++ + + I L+
Sbjct: 350 DNLDTKVSVTMGKRKGRLVVEFGDQDDFERIMGLI 384
>gi|291543436|emb|CBL16545.1| chromosome segregation DNA-binding protein [Ruminococcus sp. 18P13]
Length = 277
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 96/291 (32%), Positives = 159/291 (54%), Gaps = 14/291 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K LGRG L + T + + + I PN PR F+ +
Sbjct: 1 MAKGGLGRGYETLFSD-----------NTTEVHNLSTLRVAEIEPNREQPRKSFDDGAIA 49
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L SI+ HG+IQP++VR ++NG Y+I+AGERR+RAA+M L EVPV IR + ++ +++I
Sbjct: 50 ALADSIREHGMIQPILVRPLENGSYQIVAGERRWRAARMLGLEEVPVTIRAMSDQETMQI 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR++LNP+EEA GY++L+ ++G TQ I IVG+SRS VAN LR+L+LP +++
Sbjct: 110 ALIENLQRENLNPIEEAQGYQELLDQFGMTQECIAQIVGRSRSAVANSLRLLQLPGQIQQ 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+++ I+ GHA+ L +D ++ + + KE + R
Sbjct: 170 YLQEGSITTGHAKALAGFADEEAMLACAARAADGQLTVRAIEKLAAAPKEHLL---QPDR 226
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
++ Y ++E +SS +G + + KG ++Y + L + L E
Sbjct: 227 RRDSYYKEMELSLSSSLGRKVKVDQGRKKGMLILEYYDKDDLATLAKKLTE 277
>gi|258626067|ref|ZP_05720918.1| Probable chromosome-partitioning protein parB [Vibrio mimicus
VM603]
gi|258581593|gb|EEW06491.1| Probable chromosome-partitioning protein parB [Vibrio mimicus
VM603]
Length = 293
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 175/298 (58%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + ++ + +SI ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSTEGELADLSISNLKPGIYQPRKDLSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAAK A L +VP +I+ V++++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRHLSTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNAMEEAQALERLQNEFSLTHQQVAEVIGKSRTTVTNLLRLNQLSD 180
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR ++ + +AQ++ K+M+VR TE+LV++
Sbjct: 181 DVKRLLETKQLEMGHARALLMLEGEQQVEVAQLVAKKQMTVRQTEQLVKK-----CLTDP 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ + + + +S K+ +SI + N K + I + +L+++ + L
Sbjct: 236 SDTKNVSEDLEIQQMSQNLSEKLAAKVSIVRSPNGKSKVTISLDEPHKLELLIAKLQN 293
>gi|224542233|ref|ZP_03682772.1| hypothetical protein CATMIT_01408 [Catenibacterium mitsuokai DSM
15897]
gi|224524868|gb|EEF93973.1| hypothetical protein CATMIT_01408 [Catenibacterium mitsuokai DSM
15897]
Length = 295
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 100/300 (33%), Positives = 165/300 (55%), Gaps = 16/300 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSID----SPEKKTETIPESQDCISIHSIVPNPHNPRN 56
M++ K+RL +GL A+ + D ++ + SQ+ +SI I PNP+ PR
Sbjct: 1 MAD--KKKRLSKGLDAIFDTTSTGGDLQSMISAIESNSNEYSQEKVSIDLIRPNPYQPRK 58
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+F+ + L +L QSIK HGI+QP+++ Y I+AGERRFR A +A L+EVP II +
Sbjct: 59 HFDQDKLNELAQSIKEHGILQPILL-KKSIHGYDIVAGERRFRGANIAGLTEVPAIIVDF 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ +EIA++EN+QR+DLN +EEA Y+ ++ + TQ ++ +GKSR+HV N LR+L
Sbjct: 118 TDDQMMEIALLENIQREDLNAIEEAQAYKAMMDKMNLTQEELAGRIGKSRTHVTNTLRLL 177
Query: 177 KLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+ +++ I + +S+GH R LV L +A + +K+SVR E++V+
Sbjct: 178 NINEKLQQYILEGILSMGHVRPLVGLDDETALKIANRAIKEKLSVRQVEDIVRGYK---L 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+K+ +EK T E + K + ++ + +KY E L I ++G
Sbjct: 235 AQKRKNAPKKEKNTTYTYAEDLLRKKFRTKVKVEEK----TITLKYSDTEDLNRILEIMG 290
>gi|78355076|ref|YP_386525.1| chromosome segregation DNA-binding protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
gi|78217481|gb|ABB36830.1| chromosome segregation DNA-binding protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 305
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 109/301 (36%), Positives = 175/301 (58%), Gaps = 18/301 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
R LGRGL AL + + + K E +SI +++PNP PR +F E L++L
Sbjct: 6 RGLGRGLDALFKGYQEEAPAADTKHENPG----TVSIKALMPNPDQPRKHFSEEALQELT 61
Query: 68 QSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
SI+S G++QPL+VR N +Y+IIAGERR+RA + A +++VPVII+N+ ++ +L +A
Sbjct: 62 DSIRSQGVLQPLLVRPAKNAEGMYEIIAGERRWRACQKARVTDVPVIIKNLTDEETLAVA 121
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEA G QL ++G Q + + +GKSRS VAN LR+L+LP + ++
Sbjct: 122 LIENLQREDLNPMEEAHGMAQLKEQFGMNQETLAARLGKSRSAVANTLRLLQLPEAAQQD 181
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ K ++ GHARTL+S SD + A + + ++VR EE E + G
Sbjct: 182 LTKGALTAGHARTLLSVSDETARAALHRRIIDEGLTVRAAEEQAAYFKEHGELPAENSAG 241
Query: 243 SREK---------EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+K ++ L +K+ + + + SI KG+ + + + E+L + SLL
Sbjct: 242 PAKKASALPRTMPSPTMSSLREKLKATMPVKASITGSEEKGKVTLSFSSQEELARVLSLL 301
Query: 294 G 294
G
Sbjct: 302 G 302
>gi|308513277|ref|NP_951169.2| ParB-like nuclease domain-containing protein [Geobacter
sulfurreducens PCA]
gi|41152666|gb|AAR33442.2| parB-like domain protein [Geobacter sulfurreducens PCA]
gi|298504222|gb|ADI82945.1| ParB-like nuclease domain protein, putative transcriptional
regulator [Geobacter sulfurreducens KN400]
Length = 279
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 159/292 (54%), Gaps = 19/292 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LG+G+AAL+ E + I I P+ + PR F E LE
Sbjct: 2 VKKTGLGKGMAALLP-----------VVEEEGKRYFSCPIEDIRPHKNQPRKTFVPEKLE 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ GIIQPL+VR Y++IAGERR+RAA+ A L EVPV+I++V ++LE+
Sbjct: 51 ELAASIREKGIIQPLVVRKKG-DHYELIAGERRWRAAQKAGLREVPVVIQDVSEDTALEM 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +EEA Y L+ +G TQ ++ VGK RS +AN LR+LKLP ++
Sbjct: 110 ALIENIQREDLNAVEEAEAYHALMENFGLTQEELAKRVGKDRSTIANSLRLLKLPVELKR 169
Query: 185 MIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
I +E +++GHAR ++ S + I+ ++VR+ E LV+ +
Sbjct: 170 DIVEERLAMGHARAVLALDSDAQIKEARDAIIKGNLTVREAEGLVKRLKA----GARTGA 225
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + + DL +++ ++ + I+ G+ I + E+L I +L
Sbjct: 226 KAKTADVHSADLVEQLQRRLMTRVVIRRGGRGGKIEIAFGNQEELSRIVDML 277
>gi|78224602|ref|YP_386349.1| chromosome segregation DNA-binding protein [Geobacter
metallireducens GS-15]
gi|78195857|gb|ABB33624.1| chromosome segregation DNA-binding protein [Geobacter
metallireducens GS-15]
Length = 279
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 101/290 (34%), Positives = 160/290 (55%), Gaps = 19/290 (6%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K LG+G+AAL+ E + I I PN + PR F + LE+L
Sbjct: 4 KTGLGKGMAALLP-----------VVEEEGKRYFSCPIEEIRPNRNQPRKTFTPDRLEEL 52
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SI+ GIIQPL+VR Y++IAGERR+RAA+ A L EVPV+I++V ++LE+A+
Sbjct: 53 AASIREKGIIQPLVVRKKG-DHYELIAGERRWRAAQKAGLREVPVVIQDVSEDTALEMAL 111
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLN +EEA Y L+ + TQ+++ VGK RS VAN LR+LKLP+ +++ I
Sbjct: 112 IENIQREDLNAVEEAEAYHALMENFSLTQDELAKRVGKDRSTVANSLRLLKLPAELKKDI 171
Query: 187 RKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+E +++GHAR ++ + +V ++VR+ E LV+ +K
Sbjct: 172 VEERLAMGHARAILALDTDLQMREARDAVVKGNLTVREAESLVKRLKG----EQKPKPKV 227
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
E + DL +++ + I+++ G+ I Y + ++L I LL
Sbjct: 228 ATVEVHAADLVEQLRRRFMTKIAVRKSGKGGKIEIAYGSRDELARIVDLL 277
>gi|297567552|ref|YP_003686524.1| parB-like partition protein [Meiothermus silvanus DSM 9946]
gi|296852001|gb|ADH65016.1| parB-like partition protein [Meiothermus silvanus DSM 9946]
Length = 274
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 96/294 (32%), Positives = 161/294 (54%), Gaps = 23/294 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS S LG+GL AL+ + + + I P P PR F+
Sbjct: 1 MSKKPS--GLGKGLDALLP--------------KPQAALVRLPLALIKPGPSQPRRNFDQ 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SIK G++QPL+VR G Y+++AGERR+RA+++A L EVP +IR++ ++
Sbjct: 45 EALEELAASIKEKGLLQPLLVRPKGEG-YELVAGERRWRASQLAGLHEVPAVIRDITDRE 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+A+VEN+QR+DLNP+EEA GY++L E G +Q +I VGK+R+ V N +R+L+LP
Sbjct: 104 ALELALVENLQREDLNPVEEAQGYQRL-VEMGLSQEEIAKAVGKARTTVTNAIRLLQLPK 162
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
S + EI+ GHAR L++ + + ++ + + K + +
Sbjct: 163 SALAALEAGEITAGHARALLALPNSKREWGLQEILSKNLTVRDS----EKLKDRAEQPVQ 218
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ +++ ++ + +S ++G + KG+ I+Y + E+L+ I LG
Sbjct: 219 KAPITRQEAYPEIARSLSRQLGWKVRF-VGEKKGRLEIQYHSREELEAILKRLG 271
>gi|325206850|gb|ADZ02303.1| putative chromosome partitioning protein parB [Neisseria
meningitidis M04-240196]
Length = 286
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLNSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A L+E+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQAALQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E I LG
Sbjct: 225 RPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHILKQLG 281
>gi|282848778|ref|ZP_06258173.1| ParB-like protein [Veillonella parvula ATCC 17745]
gi|282581564|gb|EFB86952.1| ParB-like protein [Veillonella parvula ATCC 17745]
Length = 309
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 93/299 (31%), Positives = 157/299 (52%), Gaps = 11/299 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S LG+GL L+ + PEK+ + I +VPN PR F+ +
Sbjct: 7 SKKSKASGLGKGLENLMKVDSVDSVLPEKE-------IHELPISELVPNVDQPRKSFDDD 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L L +SIK+ GI QP++VR N Y+I+AGERR+RAA +A L VPVI++ +
Sbjct: 60 SLATLAESIKNLGIFQPIVVRKQKNK-YQIVAGERRYRAAMIAGLKTVPVIVKKYSTEEM 118
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
E+A+VEN+QR+ L+P+EEAL Y+ L+ Y TQ I + +G+SRS++AN++R+LKL S
Sbjct: 119 TEVALVENLQREGLDPIEEALAYQGLMDTYKQTQEMISARLGRSRSYIANMVRLLKLCDS 178
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
V++ + + ++++G AR L++ + K + + + K K
Sbjct: 179 VQKDLIEGDLTVGQARPLLALRSAAQQMEAAERIKEGELSARQAEILVKSMQNKSSKAKA 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNK---GQFCIKYETNEQLKIICSLLGEND 297
G + + L ++ +G ++IK R K G+ I + + +L+ + + + D
Sbjct: 239 GKPQNTAEVRALMDRLKLSLGSPVNIKFRAGKKVQGKIEIAFSSEAELERLIAYMDGQD 297
>gi|294792410|ref|ZP_06757557.1| stage 0 sporulation protein J [Veillonella sp. 6_1_27]
gi|294456309|gb|EFG24672.1| stage 0 sporulation protein J [Veillonella sp. 6_1_27]
Length = 309
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 93/299 (31%), Positives = 158/299 (52%), Gaps = 11/299 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S LG+GL L+ + PEK+ + I +VPN PR F+ +
Sbjct: 7 SKKSKASGLGKGLENLMKVNSVESVLPEKE-------IHELPISELVPNVDQPRKSFDED 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L L +SIK+ GI QP++VR N Y+I+AGERR+RAA +A L VPVI++ + +
Sbjct: 60 SLATLAESIKNLGIFQPIVVRKQKNK-YQIVAGERRYRAAMIAGLKTVPVIVKKYNTEEM 118
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
E+A+VEN+QR+ L+P+EEAL Y+ L+ Y TQ I + +G+SRS++AN++R+LKL S
Sbjct: 119 TEVALVENLQREGLDPIEEALAYQGLMDTYKQTQEMISARLGRSRSYIANMVRLLKLCDS 178
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
V++ + + ++++G AR L++ + K + + + K K
Sbjct: 179 VQKDLIEGDLTVGQARPLLALRSAAQQIEAAERIKEGELSARQAEALVKSMQNKSSKAKT 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNK---GQFCIKYETNEQLKIICSLLGEND 297
G + + L ++ +G ++IK R K G+ I + + +L+ + + + D
Sbjct: 239 GKPQNTAEVRALMDRLKLSLGSPVNIKFRAGKKVQGKIEIAFSSEAELERLIAYMDGQD 297
>gi|323493001|ref|ZP_08098137.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio brasiliensis LMG 20546]
gi|323312737|gb|EGA65865.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio brasiliensis LMG 20546]
Length = 293
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 95/298 (31%), Positives = 180/298 (60%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEK----KTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + + ++I+ + P + PR E
Sbjct: 1 MSKRGLGKGLDALLSTSSLAREKQQSALHSQELSSDGNLTDLNINCLKPGIYQPRKEMEP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR ++N ++IIAGERR+RAA+ A L +VP +++NV++++
Sbjct: 61 EALEELAASIESQGIIQPIVVRQVENDKFEIIAGERRWRAARKAGLKQVPCVVKNVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA+ ++L E+ T + ++GKSR+ V+N+LR+ +L S
Sbjct: 121 AIAMALIENIQREDLNVIEEAIALDRLQEEFSLTHQQVADVIGKSRAAVSNLLRLNQLES 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ ++ +GHAR L + + +AQ++ KKM+VR TE+LV++ + +
Sbjct: 181 DVKSLVSGNQLDMGHARALLALEGEQQVEVAQLVAKKKMTVRQTEQLVKK-----CLQPE 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ + +K+S +G ++I + N K + I + +L+ + + L
Sbjct: 236 PEAKTEPQDAEAQQMSQKLSEMLGGKVAIVRGSNGKSKVTISLDEPHKLEQLIAKLES 293
>gi|312882253|ref|ZP_07741999.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370097|gb|EFP97603.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio caribbenthicus ATCC BAA-2122]
Length = 293
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 97/296 (32%), Positives = 179/296 (60%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEK----KTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + ++I+S+ P + PR E
Sbjct: 1 MSKRGLGKGLDALLSTSSLAREKQQSALHSQELSSDGQLTDVNINSLKPGMYQPRKDMEP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR ++N ++IIAGERR+RAA+ A L +VP +I+NV++++
Sbjct: 61 EALEELAASIESQGIIQPIVVRQVENDKFEIIAGERRWRAARKAGLKQVPCVIKNVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEAL E+L E+ T + ++GKSR+ V N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNVIEEALALERLQEEFELTHQQVAEVIGKSRATVTNLLRLNQLEM 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ ++ I +GHAR L + + +A+++ K+M+VR TE+LV++ + +
Sbjct: 181 DVKYLLSEKMIDMGHARALLALEGEQQVDIAELVAKKRMTVRQTEQLVKK-----CLQPQ 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
+ + ++ +K+SS +G ++I + N K + I + + + + + L
Sbjct: 236 SETKNETNDAEAQEISEKLSSMLGAKVAIVRSDNGKSKITISLDEPHKFEQLVAKL 291
>gi|50955949|ref|YP_063237.1| chromosome partitioning protein [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50952431|gb|AAT90132.1| chromosome partitioning protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 319
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 91/312 (29%), Positives = 159/312 (50%), Gaps = 16/312 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI------------DSPEKKTETIPESQDCISIHSIV 48
M+ + LGRG+ ALI +QS + E +S IV
Sbjct: 1 MA--AKRTGLGRGIGALIPTTDQSARPVDVFFPEPLDTATEALVAVPGARLANLSPVDIV 58
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRAAKMASL 106
PNP PR F+ L++L SI+ G++QP++VR G Y++I GERR RA K L
Sbjct: 59 PNPSQPRVEFDQNELDELVASIREVGVLQPVVVRPLRNQAGTYELIMGERRLRATKELGL 118
Query: 107 SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSR 166
+P I+++ +++ L A++EN+ R LNPLEEA Y+QL++++G TQ ++ + +G+SR
Sbjct: 119 DTIPAIVKDTADEAMLRDALLENLHRSQLNPLEEASAYQQLLADFGITQEELAARIGRSR 178
Query: 167 SHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELV 226
+ N +R+LKLP++V+ + +S GHAR ++S D + K ++ +
Sbjct: 179 PQITNTIRLLKLPATVQTRVAAGVLSAGHARAILSLGDDQKGMVHLADKIVNEDLSVRAA 238
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
+ +K K + +L ++ +K+ ++ + I KGQ + + T + L
Sbjct: 239 EAAASKAPKTVRTAVKPGRHRGHLDEVAQKLGDRLNTRVKITLGARKGQIVVDFATIQDL 298
Query: 287 KIICSLLGENDF 298
I +GE+++
Sbjct: 299 NRILEEIGESEY 310
>gi|134103810|ref|YP_001109471.1| chromosome partitioning [Saccharopolyspora erythraea NRRL 2338]
gi|291005732|ref|ZP_06563705.1| chromosome partitioning [Saccharopolyspora erythraea NRRL 2338]
gi|133916433|emb|CAM06546.1| chromosome partitioning [Saccharopolyspora erythraea NRRL 2338]
Length = 275
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 84/258 (32%), Positives = 148/258 (57%), Gaps = 4/258 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
+ I +I PNP PR+ F+ E L +L SI+ G++QP++VR ++ +++I GERR+R
Sbjct: 7 REVGIKAITPNPKQPRHVFDEEALAELEHSIREFGLMQPIVVRELETDQFELIMGERRWR 66
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AA+ A L +P I+R + L A++EN+ R LNPLEEA Y+QL+ E+G T +++
Sbjct: 67 AAQRAGLETIPAIVRQTQDDDLLRDALLENIHRVQLNPLEEASAYQQLLDEFGVTHDELA 126
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKK 216
+G+SR + N +R+L+LP V+ + +S GHAR L+ LA IV++
Sbjct: 127 DRIGRSRPVITNTIRLLRLPMPVQRRVAAGVLSAGHARALLSLDEPGGQEELASRIVAEG 186
Query: 217 MSVRDTEELVQEQDNK-KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQ 275
+SVR TEE V + + K+ K + + L L +++S ++ + ++ KG+
Sbjct: 187 LSVRATEEAVTLKKGEGPAKQAKPAPRKQMQAPGLQGLAERLSDRLDTKVKVELGRRKGK 246
Query: 276 FCIKYETNEQLKIICSLL 293
+++ + + L+ + L+
Sbjct: 247 IVVEFGSVDDLERLAELI 264
>gi|317496040|ref|ZP_07954401.1| ParB partition protein [Gemella moribillum M424]
gi|316913846|gb|EFV35331.1| ParB partition protein [Gemella moribillum M424]
Length = 285
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 91/293 (31%), Positives = 160/293 (54%), Gaps = 11/293 (3%)
Query: 4 NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
S + LGRGL A+ + + + I + I NP+ PR F E L
Sbjct: 3 KKSGKGLGRGLDAIFA-------TEHIELVEDSDKVVDIPLEEIKKNPYQPRTVFNEEKL 55
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
+L SI+ +G++QP++V Y IIAGERRFRA ++ +P II+ + ++ +
Sbjct: 56 NELKDSIEKNGLLQPIVV-KNAVKGYYIIAGERRFRAFELLGKKTIPAIIKEMSDEEMMI 114
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
A++EN+QR+DL+ LEEA Y+ L+ + TQ ++ +GKSR ++AN LR+LKLP+ ++
Sbjct: 115 FAVLENLQREDLSSLEEAESYKNLMDKMDLTQEELAKKLGKSRPYIANSLRLLKLPAEIK 174
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ K IS HARTL++ ++ +V K EL + +N + K +
Sbjct: 175 AELEKGIISAAHARTLLALKTKKAMIEVCNRVKERQMSVRELEEYINN--LTKPKTTKKV 232
Query: 244 REKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ K+ ++ + E + ++G ++IK +RN KG+ I+++ N++ + I +L +
Sbjct: 233 KAKDIFIEEQENILKKRLGTVVTIKQNRNKKGKIEIEFKDNDEFERIVALFKD 285
>gi|169825316|ref|YP_001692927.1| chromosome partitioning protein ParB-like protein [Finegoldia magna
ATCC 29328]
gi|302380971|ref|ZP_07269432.1| ParB-like protein [Finegoldia magna ACS-171-V-Col3]
gi|167832121|dbj|BAG09037.1| chromosome partitioning protein ParB homolog [Finegoldia magna ATCC
29328]
gi|302311192|gb|EFK93212.1| ParB-like protein [Finegoldia magna ACS-171-V-Col3]
Length = 269
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 98/287 (34%), Positives = 157/287 (54%), Gaps = 23/287 (8%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LGRGL ALI T +S I + I+ PR +FE + + +L
Sbjct: 4 KKGLGRGLDALIP--------QNIIETTSSDSIVKIELSKIIRREDQPRTHFEKDKIREL 55
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SIK +G+I P+IVR D Y+IIAGERRF A+ A LSE+P II+ +++ E+++
Sbjct: 56 ANSIKEYGVISPIIVRKKDEK-YEIIAGERRFLASLEAGLSEIPAIIKEMEDSEVAEVSL 114
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLN +EEA+ Y+ L+ Y TQ ++ + KSRS++AN LR+L L + +
Sbjct: 115 IENIQREDLNAVEEAVAYKNLMENYNLTQKELADKLSKSRSYIANTLRLLNLDELSLDHL 174
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+K +I+ AR+L++ D + L+ + +KK ++I + S+E
Sbjct: 175 KKGDITSSQARSLLAIDDMKKR--------------KALLDKLLSKKTNVREIEKVSKET 220
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +L DL+ + K + IK R G I+Y +NE L+ I +L
Sbjct: 221 DPFLLDLQNRFLEKFSTKVRIKPRRKGGSIEIEYLSNEDLERIMEIL 267
>gi|303234706|ref|ZP_07321334.1| ParB-like protein [Finegoldia magna BVS033A4]
gi|302494189|gb|EFL53967.1| ParB-like protein [Finegoldia magna BVS033A4]
Length = 269
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 100/287 (34%), Positives = 158/287 (55%), Gaps = 23/287 (8%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LGRGL ALI T +S I + I+ PR +FE + + +L
Sbjct: 4 KKGLGRGLDALIP--------QNIIETTSSDSIVKIELSKIIRREDQPRTHFEKDKIREL 55
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SIK +G+I P+IVR D Y+IIAGERRF A+ A LSE+P II+ +++ E+++
Sbjct: 56 ANSIKEYGVISPIIVRKKDEK-YEIIAGERRFLASLEAGLSEIPAIIKEMEDSEVAEVSL 114
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLN +EEA+ Y+ L+ Y TQ ++ + KSRS++AN LR+L L S + +
Sbjct: 115 IENIQREDLNAVEEAVAYKNLMENYNLTQKELADKLSKSRSYIANTLRLLNLDESSLDHL 174
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+K EI+ AR+L++ D + L+ + +KK ++I + S+E
Sbjct: 175 KKGEITSSQARSLLAIDDMKKR--------------KALLDKLLSKKTNVREIEKVSKET 220
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +L DL+ + K + IK R G I+Y +NE L+ I +L
Sbjct: 221 DPFLLDLQNRFLEKFSTKVRIKPRRKGGSIEIEYLSNEDLERIMEIL 267
>gi|294794216|ref|ZP_06759352.1| stage 0 sporulation protein J [Veillonella sp. 3_1_44]
gi|294454546|gb|EFG22919.1| stage 0 sporulation protein J [Veillonella sp. 3_1_44]
Length = 309
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 92/299 (30%), Positives = 158/299 (52%), Gaps = 11/299 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S LG+GL L+ + P+K+ + I +VPN PR F+ +
Sbjct: 7 SKKSKASGLGKGLENLMKVDSVESVLPDKE-------IHELPISELVPNVDQPRKSFDED 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L L +SIK+ GI QP++VR N Y+I+AGERR+RAA +A L VPVI++ + +
Sbjct: 60 SLATLAESIKNLGIFQPIVVRKQKNK-YQIVAGERRYRAAMIAGLKTVPVIVKKYNTEEM 118
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
E+A+VEN+QR+ L+P+EEAL Y+ L+ Y TQ I + +G+SRS++AN++R+LKL S
Sbjct: 119 TEVALVENLQREGLDPIEEALAYQGLMDTYKQTQEMISARLGRSRSYIANMVRLLKLCDS 178
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
V++ + + ++++G AR L++ + K + + + K K
Sbjct: 179 VQKDLIEGDLTVGQARPLLALRSAAQQMEAAERIKEGELSARQAETLVKSMQNKSSKAKT 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNK---GQFCIKYETNEQLKIICSLLGEND 297
G + + L ++ +G ++IK R K G+ I + + +L+ + + + D
Sbjct: 239 GKPQNTAEVRALMDRLKLSLGSPVNIKFRAGKKVQGKIEIAFSSEAELERLIAYMDGQD 297
>gi|328951742|ref|YP_004369077.1| parB-like partition protein [Marinithermus hydrothermalis DSM
14884]
gi|328452066|gb|AEB12967.1| parB-like partition protein [Marinithermus hydrothermalis DSM
14884]
Length = 272
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 111/294 (37%), Positives = 170/294 (57%), Gaps = 25/294 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS S LGRGL AL+ +P + + I PNPH PR F+
Sbjct: 1 MSKKPS--GLGRGLEALLP--------------KVPTGLTRVPLALIRPNPHQPRKAFDP 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L SI+ G++QPL+VR G Y+++AGERRFRAA+ A L EVPVI+R++D++
Sbjct: 45 AALEELAASIREKGLLQPLLVRPRGEG-YELVAGERRFRAAQAAGLREVPVIVRDLDDRE 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+A+VEN+QR+DLNP+EEA GY++L E G TQ +I VGK+RS +AN LR+L+LP
Sbjct: 104 ALELALVENLQREDLNPVEEARGYQRL-LEMGLTQEEIAKAVGKARSTIANALRLLQLPR 162
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
E + I+ GHAR L+ + L + + V+E + K++ K +
Sbjct: 163 EALEALETGRITAGHARALLMLPEDQRLWGLREILSRGLS-----VREAERLKDRLKALQ 217
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
SRE+ Y +L + +S ++G+ + + +G+ + Y + E+L+ + LLG
Sbjct: 218 APSRERTAY-PELAQALSRRLGIKVRLT-GERRGRLELYYHSEEELQALLDLLG 269
>gi|225024618|ref|ZP_03713810.1| hypothetical protein EIKCOROL_01495 [Eikenella corrodens ATCC
23834]
gi|224942632|gb|EEG23841.1| hypothetical protein EIKCOROL_01495 [Eikenella corrodens ATCC
23834]
Length = 287
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 96/297 (32%), Positives = 170/297 (57%), Gaps = 20/297 (6%)
Query: 1 MSNNYSKRRLG-RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K LG RGL +L+ ++ + + + I P + PR+ +
Sbjct: 1 MAKP--KSGLGGRGLDSLLAG---------AVGDSSGDRLTSVPVRDIKPGRYQPRSQMD 49
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
EGL++L SIK+ G+IQP+IVR Y++IAGERR+RA+++A L+E+PV+I+++ ++
Sbjct: 50 DEGLQELADSIKAQGVIQPVIVREHGLSQYELIAGERRWRASQLAGLAEIPVVIKSIGDE 109
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++L I ++EN+QR++LNP+EEA G ++L+ E+G T + VG+SRS V+N LR+L LP
Sbjct: 110 AALAIGLIENIQRENLNPIEEAQGLKRLVDEFGLTHETVAKAVGRSRSAVSNSLRLLALP 169
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+EM+ ++ +GHAR L+S LAQ V SVR+ E ++ ++
Sbjct: 170 EPVQEMLFLRQLEMGHARALLSLPVMEQLSLAQKAVKNGWSVREVERR-----SQLVQQA 224
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQLKIICSLL 293
+ S+ + L + ++ K+G+ ++ N+K G+ + +++ E + L
Sbjct: 225 PQEKKSKTVSPDIRYLNEALTEKLGVRAEVQTANHKRGKVVLHFDSPETFARLMQQL 281
>gi|255308709|ref|ZP_05352880.1| stage 0 sporulation protein J [Clostridium difficile ATCC 43255]
Length = 287
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 110/294 (37%), Positives = 169/294 (57%), Gaps = 10/294 (3%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M N + RLGRGL+ALI E+ K ET + I I I PN PR F+
Sbjct: 1 MENKSKRSNRLGRGLSALIPEI---------KVETSEKEIVNIDIDKIYPNEVQPRKQFD 51
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E ++ L SIK++G++QP++V+ +N Y IIAGERRFRA+K+A+ +++P II+++D K
Sbjct: 52 EEKIKVLSDSIKNYGVLQPIVVKMDENNKYMIIAGERRFRASKLANKNQIPAIIKDIDMK 111
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+EIA++EN+QR+DLN +EEAL Y+ LI Y TQ +I VGKSR H+ N LR+L L
Sbjct: 112 DIMEIALIENLQREDLNSIEEALAYKSLIEHYNVTQEEISEAVGKSRPHITNTLRLLNLG 171
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V EMI I+ GH + L+ +D Q+ + E+ E +++
Sbjct: 172 QDVIEMIDSGRITAGHGKALLRIADKDLQLQIAKKIEEEELSVREVENIAKKISENKQEE 231
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ S+ K+ ++ D+E K+ + G ++I KG+ I+Y ++ L I S+L
Sbjct: 232 PKKSKPKDVFILDVEDKLRNIFGTKVNISKGKKKGKIEIEYYNDDDLNSIVSML 285
>gi|257785160|ref|YP_003180377.1| parB-like partition protein [Atopobium parvulum DSM 20469]
gi|257473667|gb|ACV51786.1| parB-like partition protein [Atopobium parvulum DSM 20469]
Length = 286
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 96/295 (32%), Positives = 163/295 (55%), Gaps = 16/295 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LG+GL +L EV+ + + ++ T + + I PN + PR F+ L
Sbjct: 2 VKKTGLGKGLNSLFSEVDAEVGNKKETT--------TLPLKKIKPNKNQPRKRFDEAELA 53
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SIK +GI+QPL+VR Y+I+AGERRF+AAK+A + EVPV+I+++ ++ ++
Sbjct: 54 ELSDSIKQNGILQPLLVREKG-DHYEIVAGERRFQAAKLAKIEEVPVVIKSISDEEVFKL 112
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR DL+P+EEA GY+QLI + TQ+D+ ++ KSRS + N LR+L LP V+
Sbjct: 113 ALIENLQRSDLSPIEEAQGYKQLIKQENLTQDDLAKVLSKSRSAITNTLRLLDLPIEVQT 172
Query: 185 MIRKEEISLGHARTLVS---TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ IS GHAR ++S + LAQ ++ + +SVR TE L ++ K
Sbjct: 173 LMAGGRISAGHARAILSVSGKEGRIKLAQKVIEENLSVRQTENLAPLFSVTTAEKPKRQP 232
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ +++ + + +++ K + I++ E+L + L
Sbjct: 233 TPQA----YKRAARQLRIALDTPVKVRNVRGKNKIEIEFNDEEELAALVEKLSNG 283
>gi|222053561|ref|YP_002535923.1| parB-like partition protein [Geobacter sp. FRC-32]
gi|221562850|gb|ACM18822.1| parB-like partition protein [Geobacter sp. FRC-32]
Length = 278
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 152/290 (52%), Gaps = 14/290 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LG+G+AAL+ E I I PN PR F + LE
Sbjct: 2 VKKTGLGKGMAALLP-----------VVEEEGRRFFSCPIEEIRPNKDQPRKSFAHDKLE 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ GIIQPL+V A Y++IAGERR+RAA+ A L EVPV+I++V ++LE+
Sbjct: 51 ELAASIREKGIIQPLVVVAKG-SHYELIAGERRWRAAQKAGLHEVPVVIQDVSEDTALEM 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +EEA Y L+ + +Q ++ VGK RS VAN +R+LKLP+ ++
Sbjct: 110 ALIENIQREDLNAVEEAEAYHSLLERFNLSQEELAKRVGKDRSTVANAIRLLKLPAEIKL 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ ++ +S+GHAR L++ + + + E K K K + +
Sbjct: 170 DVIEDRLSMGHARALLTLDTAEQMKEARETVVRK--KLTVRATESLVKDMKANKQAKPKK 227
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + +L DL +++ I+++ G+ I Y ++L + LL
Sbjct: 228 QADPHLVDLTERMQRHFKTKINLRPSGKGGKIEISYHDQKELIRLIELLN 277
>gi|193216347|ref|YP_001997546.1| parB-like partition protein [Chloroherpeton thalassium ATCC 35110]
gi|193089824|gb|ACF15099.1| parB-like partition protein [Chloroherpeton thalassium ATCC 35110]
Length = 311
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 106/310 (34%), Positives = 161/310 (51%), Gaps = 20/310 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETI-----------PESQDCISIHSIVPNPHN 53
+K LG+GL ALI + + I + + S + +H I PNP+
Sbjct: 1 MAKVALGKGLRALISDESIHIINKRQDENGEHIKYRDTKSGRLGSIGNVPLHKIEPNPYQ 60
Query: 54 PRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVII 113
PR F+ LE+L QSI GIIQP+ +R Y++I+GERR RAAK A +E+P +
Sbjct: 61 PREEFDRSALEELKQSIIEKGIIQPITIRVHGEK-YQLISGERRLRAAKEAGFTEIPAYV 119
Query: 114 -RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
++ LE+A++EN+QR+ LNP+E A G+++LI E TQ + VGK RS V N
Sbjct: 120 LDIKTDEEMLELALIENIQREKLNPIEVATGFQRLIQECSLTQEQVSQRVGKDRSTVTNF 179
Query: 173 LRILKLPSSVREMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQ 229
LR+LKLP ++ +RK EIS+GHAR L++ L + Q+I+ +SVR E LV
Sbjct: 180 LRLLKLPEEIQTSLRKNEISMGHARALITLESLEAQLEIWQLILKHNLSVRKVEALVSRF 239
Query: 230 ---DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQ 285
E E +R++ +LE + K + ++H + GQ I+Y + +
Sbjct: 240 GKEKAADETETAEEERARQRNVDELNLESLLREKFATKVKLQHNKKGHGQIVIEYYSLDD 299
Query: 286 LKIICSLLGE 295
L I +
Sbjct: 300 LDRIVETINS 309
>gi|319949439|ref|ZP_08023500.1| parB-like partition protein [Dietzia cinnamea P4]
gi|319436901|gb|EFV91960.1| parB-like partition protein [Dietzia cinnamea P4]
Length = 390
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 82/281 (29%), Positives = 144/281 (51%), Gaps = 7/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + IS I PNP PR YF+ E L +L S+K G++QP+
Sbjct: 101 DRADEVSRETADLVDPGAVYREISPSDIDPNPKQPRTYFDEEALAELAHSVKEFGLLQPI 160
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + G Y++I GERR+RA++ A L+ +P I+R +++ L A++EN+ R LNPLE
Sbjct: 161 VVREMSGGRYQLIMGERRWRASQRAELATIPAIVRQTEDEDLLRDALLENIHRVQLNPLE 220
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+QL+ E+ TQ+++ + +G+SR + N +R+L+LP++V+ + +S GHAR L
Sbjct: 221 EAAAYQQLLDEFNVTQSELANRIGRSRPAITNSIRLLQLPTAVQRRVAAGVLSAGHARAL 280
Query: 200 VSTSDPLSLAQVIVSK-------KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+ + + ++ + + L E++ K R K+ L
Sbjct: 281 LGLEAGAAAQDELAARIVAEGLSVRATEEIVTLANRDAGDAEEKPKPAPRGRRKDPELEA 340
Query: 253 LEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++S + ++S+ KG+ I + L + SLL
Sbjct: 341 VAGRLSDRFETSVSVTMGRRKGRITIDVGDADDLARVLSLL 381
>gi|15805053|ref|NP_293738.1| chromosome partitioning protein [Deinococcus radiodurans R1]
gi|12230475|sp|Q9RYD8|PARB1_DEIRA RecName: Full=Probable chromosome 1-partitioning protein parB;
AltName: Full=Probable chromosome I-partitioning protein
parB
gi|6457671|gb|AAF09605.1|AE001865_2 chromosome partitioning protein [Deinococcus radiodurans R1]
Length = 288
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 96/294 (32%), Positives = 151/294 (51%), Gaps = 11/294 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K LGRGL AL+ + + I I + PR FE
Sbjct: 1 MS---KKSSLGRGLDALL-----TKKGEPVAQAGTGTQVQTLKIERIAQAAYQPRQVFEP 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L QSI+ G++QPL+VR + ++I+AGERR+RA+++A L+E+PV+IR++ ++
Sbjct: 53 ESLAELAQSIREKGVLQPLLVRPRGDA-FEIVAGERRWRASQLAGLTELPVMIRDLGDRE 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVEN+QR+DL PLEEA Y+ L+ + Q + VGK RS V N LR+L LP
Sbjct: 112 ALEIAIVENLQREDLGPLEEARAYQALLDQGL-NQEGVAQAVGKGRSTVTNALRLLTLPE 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V + + IS HAR +++ + L + + E +++ + +
Sbjct: 171 PVLRALDEGSISASHARAVLTQPEADRLWAFEQIRSRGLNVREAEALKRERGGRDKGQGA 230
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ LE +S + G + I +KG+ + Y + E+L I +LG
Sbjct: 231 PIKVNPPRAYRQLELDLSRRTGTRVKIT-GEDKGRVELNYGSREELDRILQILG 283
>gi|323496914|ref|ZP_08101942.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio sinaloensis DSM 21326]
gi|323317988|gb|EGA70971.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio sinaloensis DSM 21326]
Length = 293
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 91/298 (30%), Positives = 176/298 (59%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEK----KTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + +SI+S+ P + PR
Sbjct: 1 MSKRGLGKGLDALLSTSSLAREKQQSALHSQQLSSEGELTDLSINSLKPGVYQPRKDMSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR ++N ++IIAGERR+RAA+ A L +VP +I+NV++++
Sbjct: 61 EALEELAASIESQGIIQPIVVRQVENDKFEIIAGERRWRAARKAGLKQVPCVIKNVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA+ E+L +E+ T + ++GKSR+ V+NILR+ +L +
Sbjct: 121 AIAMALIENIQREDLNVIEEAVALERLQNEFTLTHQQVADVIGKSRAAVSNILRLNQLEN 180
Query: 181 SVREMIRKE--EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ + ++ A + + +A + +K+++VR TE+LV++ + +
Sbjct: 181 DVKSLVSENLLDMGHARALLALQGEQQVEVASQVANKQLTVRQTEQLVKK-----CLQPQ 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + ++ + +K+S +G ++I + N K + I + +L+ + + L
Sbjct: 236 SEQENAPEDTEAQQMSQKLSEMLGGKVAIVRASNGKSKVTISLDEPHKLEQLIAKLES 293
>gi|302388587|ref|YP_003824409.1| parB-like partition protein [Clostridium saccharolyticum WM1]
gi|302199215|gb|ADL06786.1| parB-like partition protein [Clostridium saccharolyticum WM1]
Length = 314
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 110/317 (34%), Positives = 184/317 (58%), Gaps = 27/317 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD------------------CI 42
M+ + LG+GL A+ G+ + +++ ++ P+ + +
Sbjct: 1 MA---KRTGLGKGLGAIFGDEVMESVAEDQELKSHPKQEQAVVKTVNGEEEQETGKGLFL 57
Query: 43 SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAK 102
+ SI PN H PR F E L +L +S+K +G++QPL+V+ Y+IIAGERR+RAAK
Sbjct: 58 KLSSIEPNHHQPRTEFREESLMELAESMKEYGVLQPLLVQRKG-DFYEIIAGERRWRAAK 116
Query: 103 MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
+A L EVPV+IR + S+EIA++ENVQR+DLNP+EEA Y++L+ E+G Q +I + V
Sbjct: 117 LAGLKEVPVVIREYTKQQSMEIALIENVQREDLNPIEEAKAYQRLMQEFGLKQEEIAARV 176
Query: 163 GKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSV 219
K+R + N +R+LKL + V++M+ + +I+ GHAR L+ +A IVS+ +SV
Sbjct: 177 AKNRVTITNSMRLLKLDNRVQDMLIENQITGGHARALLAVDEPELQFQIAGKIVSENLSV 236
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCI 278
R+ E+LV+ K+E ++K + +LE ++ + +G +SI + NKG+ I
Sbjct: 237 REVEKLVKSMSKKREPKEK-KDEDESISLIFRELEDRMKTAMGTKVSINRKDRNKGRVEI 295
Query: 279 KYETNEQLKIICSLLGE 295
+Y + +L+ I L+
Sbjct: 296 EYYSEAELERIVELIES 312
>gi|329768078|ref|ZP_08259588.1| hypothetical protein HMPREF0428_01285 [Gemella haemolysans M341]
gi|328838346|gb|EGF87956.1| hypothetical protein HMPREF0428_01285 [Gemella haemolysans M341]
Length = 286
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 98/299 (32%), Positives = 169/299 (56%), Gaps = 18/299 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL A+ + + T + IS+ I NP+ PR YF
Sbjct: 1 MAKKLGK-GLGRGLDAIFA-------TENVELTTDNDKIVEISLEEIKKNPYQPRTYFNE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L +SI+ +G++QP+IV Y IIAGERR+RA ++ E+P II+ + ++
Sbjct: 53 EKLNELKESIEKNGLLQPIIV-KKAVKGYYIIAGERRYRAFELLGKKEIPAIIKEMTDEE 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ A++EN+QR+DL+ LEE+ Y+ L+ + TQ ++ +GKSR ++AN LR+LKLP+
Sbjct: 112 MMIFAVLENLQREDLSALEESESYKNLMDKMSLTQEELAKKLGKSRPYIANSLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ + + IS HART L + + +++ +KMSVR+ EE V + +
Sbjct: 172 EIKNKLEQGLISAAHARTLLSLKTKKAMEEVCALVIDRKMSVRELEEYVAKLL-----KP 226
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
K + + K+ ++ + E + +G +++IK RN KG+ I+++ N++ + I SL +
Sbjct: 227 KEVKKPKVKDIFIEEQENNLKKLLGTSVTIKQGRNKKGKIEIEFKDNDEFERIISLFKD 285
>gi|126701299|ref|YP_001090196.1| stage 0 sporulation protein J [Clostridium difficile 630]
gi|254977332|ref|ZP_05273804.1| stage 0 sporulation protein J [Clostridium difficile QCD-66c26]
gi|255094663|ref|ZP_05324141.1| stage 0 sporulation protein J [Clostridium difficile CIP 107932]
gi|255102889|ref|ZP_05331866.1| stage 0 sporulation protein J [Clostridium difficile QCD-63q42]
gi|255316416|ref|ZP_05357999.1| stage 0 sporulation protein J [Clostridium difficile QCD-76w55]
gi|255519076|ref|ZP_05386752.1| stage 0 sporulation protein J [Clostridium difficile QCD-97b34]
gi|255652259|ref|ZP_05399161.1| stage 0 sporulation protein J [Clostridium difficile QCD-37x79]
gi|260685213|ref|YP_003216498.1| stage 0 sporulation protein J [Clostridium difficile CD196]
gi|260688872|ref|YP_003220006.1| stage 0 sporulation protein J [Clostridium difficile R20291]
gi|306521974|ref|ZP_07408321.1| stage 0 sporulation protein J [Clostridium difficile QCD-32g58]
gi|115252736|emb|CAJ70580.1| Stage 0 sporulation protein J, site-specific DNA-binding protein
[Clostridium difficile]
gi|260211376|emb|CBA67026.1| stage 0 sporulation protein J [Clostridium difficile CD196]
gi|260214889|emb|CBE07691.1| stage 0 sporulation protein J [Clostridium difficile R20291]
Length = 287
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 110/294 (37%), Positives = 169/294 (57%), Gaps = 10/294 (3%)
Query: 1 MSNNYSKR-RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M N + RLGRGL+ALI E+ K ET + I I I PN PR F+
Sbjct: 1 MENKSKRSNRLGRGLSALIPEI---------KGETSEKEIVNIDIDKIYPNEVQPRKQFD 51
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E ++ L SIK++G++QP++V+ +N Y IIAGERRFRA+K+A+ +++P II+++D K
Sbjct: 52 EEKIKVLSDSIKNYGVLQPIVVKMDENNKYMIIAGERRFRASKLANKNQIPAIIKDIDMK 111
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+EIA++EN+QR+DLN +EEAL Y+ LI Y TQ +I VGKSR H+ N LR+L L
Sbjct: 112 DIMEIALIENLQREDLNSIEEALAYKSLIEHYNVTQEEISEAVGKSRPHITNTLRLLNLG 171
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
V EMI I+ GH + L+ +D Q+ + E+ E +++
Sbjct: 172 QDVIEMIDSGRITAGHGKALLRIADKDLQLQIAKKIEEEELSVREVENIAKKISENKQEE 231
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ S+ K+ ++ D+E K+ + G ++I KG+ I+Y ++ L I S+L
Sbjct: 232 PKKSKPKDVFILDVEDKLRNIFGTKVNISKGKKKGKIEIEYYNDDDLNSIVSML 285
>gi|262204655|ref|YP_003275863.1| parB-like partition protein [Gordonia bronchialis DSM 43247]
gi|262088002|gb|ACY23970.1| parB-like partition protein [Gordonia bronchialis DSM 43247]
Length = 391
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 74/283 (26%), Positives = 143/283 (50%), Gaps = 12/283 (4%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
+ + + + I I PNP+ PR F+ + L +L SI G++QP++VR
Sbjct: 105 PAPATTPLPHDEVGAVYREIPPAQIEPNPNQPRTVFDEDALAELVHSITEFGLMQPIVVR 164
Query: 83 AIDNG-----LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
+ ++++ GERR+RA++ A L +P I+R + L A++EN+ R LNP
Sbjct: 165 ELPEPTPEGVRFQLVMGERRWRASQEAGLEAIPAIVRETPDGDMLRDALLENIHRAQLNP 224
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA Y+QL+ E+G T ++ + +G+SR ++N++R+LKLP V+ + +S GHAR
Sbjct: 225 LEEAAAYQQLLDEFGVTHEELAARLGRSRPLISNMIRLLKLPIPVQRRVAAGVLSAGHAR 284
Query: 198 TLVSTSDPLSLAQVIVSK-------KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
L+S + + ++ + + L D + + + + L
Sbjct: 285 ALLSLETGSDAQEALAARIVAEGLSVRATEEAVTLANRDDGSGGRSPASPKRRQMQMPGL 344
Query: 251 TDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
DL +++S ++ +++ KG+ +++ + E L+ I ++
Sbjct: 345 QDLAERLSDRLDTRVTVGLGKRKGKIVVEFGSVEDLERIVGVI 387
>gi|289642457|ref|ZP_06474602.1| parB-like partition protein [Frankia symbiont of Datisca glomerata]
gi|289507716|gb|EFD28670.1| parB-like partition protein [Frankia symbiont of Datisca glomerata]
Length = 316
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 89/266 (33%), Positives = 155/266 (58%), Gaps = 5/266 (1%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
T + + + S+ PNP PR +F+ + LE+L S++ G++QP++VR I G Y+
Sbjct: 40 PTPVHGATFREVPVDSVTPNPRQPRTHFDEDALEELAASLREVGLLQPIVVREIMPGRYE 99
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
++ GERR+RA+K+A S++P I+R+ + + L A++EN+ R+ LNPLEEA YEQL+ +
Sbjct: 100 LVMGERRWRASKLAGFSQIPAIVRDTADDAMLRDALLENLHRQQLNPLEEAAAYEQLLRD 159
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLS 207
+G T ++ +G+SRSHV N++R+L LP +V+ + +S GHAR L+
Sbjct: 160 FGATHEELAGKLGRSRSHVTNMIRLLGLPPAVQRRVAAGVLSAGHARALLSLEDPDAQDR 219
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
LA IV++ +SVR EE+V ++ R+ R L L ++S + + +
Sbjct: 220 LATRIVAEGLSVRAVEEIV--ALGEEGPRRTPPRRPRVTSPALHKLASRLSDQFDTRVKV 277
Query: 268 KHRNNKGQFCIKYETNEQLKIICSLL 293
NKG+ +++ + E L+ I +++
Sbjct: 278 DMGRNKGKITVEFASVEDLERIVAVM 303
>gi|291515478|emb|CBK64688.1| ParB-like partition proteins [Alistipes shahii WAL 8301]
Length = 289
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 105/291 (36%), Positives = 156/291 (53%), Gaps = 10/291 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++ LGRGL A+ G P I I I+PNP PR F+ E L+
Sbjct: 1 MKQKGLGRGLDAIFG------SDPVDAKLKPMSQMAEIEIADIIPNPTQPRTQFDEEALD 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ G+IQP+ V+ D G Y II+GERR+RAA+ A L +P IR VD+++ +
Sbjct: 55 ELADSIRQLGVIQPVTVKKGDGGKYVIISGERRWRAAQRADLKTLPAYIREVDDENLHAM 114
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLN +E ALG ++LI E TQ+ + VGK RS V+N LR+LKLP V+
Sbjct: 115 ALVENIQRQDLNAIEIALGMQRLIDECNLTQDALSEKVGKKRSSVSNYLRLLKLPDEVQL 174
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+++ IS+GHA+ + L + + + K +SVR EELV+ K + E
Sbjct: 175 ALKEGLISMGHAKAIAGAPADQQLRVLKRCIKKGLSVRQVEELVRSLSEAPGKEAQNVED 234
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSL 292
E YL L +++ ISIK +N G+ I + + ++
Sbjct: 235 EEYPESYLK-LVEQLEKFFSQEISIKRAKNGGGKIVIGFTDDRDIEQFIER 284
>gi|317133699|ref|YP_004093013.1| parB-like partition protein [Ethanoligenens harbinense YUAN-3]
gi|315471678|gb|ADU28282.1| parB-like partition protein [Ethanoligenens harbinense YUAN-3]
Length = 279
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 110/291 (37%), Positives = 165/291 (56%), Gaps = 20/291 (6%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
KR LG+GL AL + + + + I PN PR FE E L L
Sbjct: 2 KRGLGKGLDALFAD----------NATGDASAPVNLRLSEIEPNTDQPRKEFEPEALSQL 51
Query: 67 CQSIKSHGIIQPLIVRAID-NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
SI+ HGI+QPL+VR I G Y+++AGERR+RAA+MA LSE PV+IR +D+ + LE+A
Sbjct: 52 ADSIRQHGILQPLLVRPIPGTGTYQLVAGERRWRAARMAGLSEAPVVIREMDDTAVLEVA 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEA G+ LI YG TQ+++ + VGKSR VAN LR+L LP +R M
Sbjct: 112 LIENLQREDLNPIEEAEGFHALIETYGLTQDEVATRVGKSRPAVANALRLLSLPEKIRAM 171
Query: 186 IRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ +S GHARTL+ + LA + V+KK+SVR+ E+LV+ + +
Sbjct: 172 VQDGRLSQGHARTLLALDNEQAQNELADLAVAKKLSVRELEKLVKHYGKGE------TKE 225
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + E+ ++ G + + KG ++Y + L+ + L
Sbjct: 226 KPLPSVFAVETERSLTDLFGRKVKVMEGKGKGMLSLEYYGEDDLRALVKRL 276
>gi|160946577|ref|ZP_02093780.1| hypothetical protein PEPMIC_00535 [Parvimonas micra ATCC 33270]
gi|158446961|gb|EDP23956.1| hypothetical protein PEPMIC_00535 [Parvimonas micra ATCC 33270]
Length = 276
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 95/289 (32%), Positives = 166/289 (57%), Gaps = 20/289 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K+ LGRGL++L+ E + D E+ + + + PR F+ + LE
Sbjct: 1 MKKKGLGRGLSSLLKEEDFITD----------ENLLTVDLDKLKAREDQPRKNFDDDSLE 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SIK+ G+IQP++VR + + Y+IIAGERRFRA+K+A L +VP++++NV ++ + E+
Sbjct: 51 ELANSIKADGVIQPIVVRKVGDK-YEIIAGERRFRASKLAGLEKVPIVVKNVSDRKAREL 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLNP+EEA+ + L+ EY TQ ++ IVGKSRS++AN LR+L L ++E
Sbjct: 110 ALVENIQREDLNPIEEAISLKTLMEEYKLTQQELSDIVGKSRSYIANNLRLLNLSDYIKE 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ + E+S RTL+S + + + LV+E + + ++K ++
Sbjct: 170 YLIRGELSPSQGRTLLSLETEEERKKYL---------DKLLVKEVNIRDVEKKAKQSKNK 220
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ ++ D+ ++++ + + I + GQ I Y L+ I L
Sbjct: 221 TEDIFIKDICERLTEVLDAKVKIHEKKKGGQIEISYLNEADLQRIIDSL 269
>gi|256833759|ref|YP_003162486.1| parB-like partition protein [Jonesia denitrificans DSM 20603]
gi|256687290|gb|ACV10183.1| parB-like partition protein [Jonesia denitrificans DSM 20603]
Length = 379
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 90/278 (32%), Positives = 143/278 (51%), Gaps = 5/278 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G + + I +I PNP PR F+ L++L SI+ G++QP
Sbjct: 86 GGTRRHTAPESELVPVPGARFAEIPTDAITPNPRQPRVNFDEGELDELVGSIREIGVLQP 145
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR G Y++I GERR+RA + A L +P IIR+ D+ + L A++EN+ R LNPL
Sbjct: 146 VVVRQKSEGDYELIMGERRWRATREAGLDTIPAIIRDTDDSAMLRDALLENLHRSALNPL 205
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y QL+ ++ T ++ + + +SR ++N LR+L LP V+ + +S GHAR
Sbjct: 206 EEAAAYRQLLDDFECTHEELATRISRSRPQISNTLRLLNLPPLVQRRVAAGVLSAGHARA 265
Query: 199 ---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
L T+D LAQ IVS+ +SVR TEE V + KK + + L
Sbjct: 266 LLGLSQTADMEKLAQRIVSEGLSVRATEEAVTM--SAGGDTKKPVRRASVPNEVAESLSS 323
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++S + + + KG+ +++ T E L I ++
Sbjct: 324 RLSDRFDTRVKVNLGKTKGRLTVEFATLEDLDRILEMM 361
>gi|149178555|ref|ZP_01857142.1| probable chromosome partitioning protein parB [Planctomyces maris
DSM 8797]
gi|148842573|gb|EDL56949.1| probable chromosome partitioning protein parB [Planctomyces maris
DSM 8797]
Length = 327
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 98/305 (32%), Positives = 167/305 (54%), Gaps = 16/305 (5%)
Query: 7 KRRLGRGLAALIG-------EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
+RRLGRGL AL+G + + E + +P QD I I I NP+ PR F
Sbjct: 23 RRRLGRGLNALLGRGGDSDSDQQDDNPASEGQGVFVPAEQDQIDIDLIERNPYQPRQDFA 82
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ L++L SI+ HG++QPL+VR + Y++IAGERR +AA+ A L VP + N++ +
Sbjct: 83 VDSLKELEGSIRQHGVLQPLLVRPFEGA-YQLIAGERRLKAARDAGLKTVPCRVLNLEER 141
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
E+AI EN++RKDLN LE+A ++ +S++ T + + RS V N++R+L L
Sbjct: 142 QVCEVAIEENLKRKDLNVLEKAQAFKNYLSQFDSTIEQLAQRLSLDRSTVNNMIRLLDLA 201
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLA-------QVIVSKKMSVRDTEELVQEQDNK 232
V++ ++ E+IS GHARTL+S + +A + + +K + L E +
Sbjct: 202 EPVKQALQAEKISAGHARTLLSLDNEKQVAVCEQIQSESLSVRKTEAEVRKILKGEVETV 261
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICS 291
+ K + + +L DL++++ +G + IK + + GQ I +++NE + I
Sbjct: 262 PFENTKQPAAAPQMTNHLVDLQQQLREILGAQVEIKLKTEHSGQILIPFDSNETFERITG 321
Query: 292 LLGEN 296
+L ++
Sbjct: 322 VLRKS 326
>gi|67458508|ref|YP_246132.1| ParB-like partition proteins [Rickettsia felis URRWXCal2]
gi|75537025|sp|Q4UN91|PARB_RICFE RecName: Full=Probable chromosome-partitioning protein parB
gi|67004041|gb|AAY60967.1| ParB-like partition proteins [Rickettsia felis URRWXCal2]
Length = 286
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 105/302 (34%), Positives = 176/302 (58%), Gaps = 24/302 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGL++L+GE SI+S + I + PN + PR FE
Sbjct: 1 MAKN---KGLGRGLSSLLGEEVISIESEIIQIINIDKI---------RPNENQPRKNFEY 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +++L SI ++G++QP+IV + ++IIAGERR+RA K+A + E+PVII+N+D +
Sbjct: 49 DKIKELADSILNNGLLQPIIV----DNNFQIIAGERRWRACKLAKVLEIPVIIKNLDARE 104
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
S+EIA++EN+QR DL +EEA G++ L+ + YT + +GKSRSH+AN+LR+ LP
Sbjct: 105 SMEIALIENIQRTDLTVMEEARGFKYLVENFNYTTEKLAERLGKSRSHIANLLRLNNLPQ 164
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
S+++ + + +S+G AR L++ +A I+S ++VR TEELV++ + +
Sbjct: 165 SIQDKVNENILSMGQARCLINHEHAEVMADHIISNDLNVRQTEELVRQWYKNEYTKSPNN 224
Query: 241 EGSREK--------EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
K + L L K +S K G+ ++I++ + G+ Y+ E+L +I
Sbjct: 225 NNKVGKRFLKDNATDNDLESLVKVLSEKFGIKVTIENYSLGGKLIFHYKNLEELDLILLK 284
Query: 293 LG 294
L
Sbjct: 285 LN 286
>gi|237809875|ref|YP_002894315.1| parB-like partition protein [Tolumonas auensis DSM 9187]
gi|237502136|gb|ACQ94729.1| parB-like partition protein [Tolumonas auensis DSM 9187]
Length = 302
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 91/297 (30%), Positives = 167/297 (56%), Gaps = 18/297 (6%)
Query: 6 SKRRLGRGLAALIGEVNQS----------IDSPEKKTETIPESQDCISIHSIVPNPHNPR 55
KR LG+GL AL+G + D+ + K + + + + P + PR
Sbjct: 4 KKRGLGKGLEALLGTSQVARQKQILSDIQADAAQDKVDNQKGELQILPVSWLRPGKYQPR 63
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
+ LEDL SI++ G+IQP++VR + Y+IIAGERR+RA ++ L VP +I+N
Sbjct: 64 RDMSQDALEDLANSIRAQGVIQPIVVRQLAEQQYEIIAGERRWRACQLVRLETVPCLIKN 123
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
V++ +++ IA++EN+QR+DLN +EEA+ ++L++E+ + + VGKSRS V+N+LR+
Sbjct: 124 VEDNAAVAIALIENIQREDLNAIEEAVALQRLMTEFELSHQQVAEAVGKSRSAVSNLLRL 183
Query: 176 LKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
L V++++ ++ +GHAR L + +A+ + K ++VRDTE +VQ+ N
Sbjct: 184 NNLNEDVKQLVEHGDLDMGHARALLSLEGEQQSEVARTVAQKSLTVRDTERMVQKLLN-- 241
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKII 289
+ E ++ + +S ++GL++ ++ +N G+ + Y+ + + I
Sbjct: 242 ---PAAAKPEPEVDQQSVVWSESLSGQLGLSVQFVRSGDNNGKIILSYQNAAEFEKI 295
>gi|114778892|ref|ZP_01453689.1| ParB-like partition protein [Mariprofundus ferrooxydans PV-1]
gi|114550861|gb|EAU53427.1| ParB-like partition protein [Mariprofundus ferrooxydans PV-1]
Length = 282
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 92/291 (31%), Positives = 161/291 (55%), Gaps = 18/291 (6%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
R LGRGL AL+G+ K T + I+I I PN + PR F ++ L
Sbjct: 5 KNRGLGRGLNALLGD---------KPTPEVLSQATQIAISKIRPNSYQPRTCFPADELSM 55
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SI+ G++ P+++R +G Y++IAGERR+RA++ A L E+P ++R+V + +LE+A
Sbjct: 56 LTESIRKEGVLMPILLRPSGDG-YELIAGERRWRASQAAGLLEIPAVVRDVSDLQALELA 114
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
I+EN QR DL+ +E A Y ++I E+G TQ + +G SR V+N++R+L+L + ++ M
Sbjct: 115 IIENEQRDDLSAIESAAAYHRMIDEFGCTQQQVAEKIGVSRVQVSNLIRLLQLSAKIKSM 174
Query: 186 IRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
I + +S+G AR LV LA V++ +S R EE ++ +
Sbjct: 175 IERRALSMGQARPLVGLPEKVAEQLADQCVAEGLSARQMEEAARKAAR-----PATNKPP 229
Query: 244 REKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
++ + + L+++++ K+GL++ + G+ I+Y +L + L
Sbjct: 230 KDVDADVLALQEELTRKLGLSVELSCKSGGGGELRIRYTQPAELDGVLRKL 280
>gi|309811391|ref|ZP_07705178.1| putative stage 0 sporulation protein J [Dermacoccus sp. Ellin185]
gi|308434698|gb|EFP58543.1| putative stage 0 sporulation protein J [Dermacoccus sp. Ellin185]
Length = 413
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 82/283 (28%), Positives = 140/283 (49%), Gaps = 7/283 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
++ D S IS I PNP PR+ F+ E + +L SI G++QP
Sbjct: 127 AGIDDERDVTSNLAPVPGASFAEISQSLIRPNPKQPRSVFDEEHMAELVHSIGEIGVLQP 186
Query: 79 LIVRA-------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
++VR Y++I GERR+RA++ A L+ VP I+R+ ++ L A++EN+
Sbjct: 187 IVVRPVPEGDPDHAQTPYELIMGERRWRASQEAGLATVPAIVRSTTDEDLLRDALLENLH 246
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R LNPLEEA Y QL+ ++G T +++ + +G+SR ++N +R+LKLP V+ + +
Sbjct: 247 RSQLNPLEEAAAYAQLLEDFGCTHDELATKIGRSRPQISNTIRLLKLPPVVQRRVAAGVL 306
Query: 192 SLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
S GHAR L+ SDP ++ ++ + + + + RE L
Sbjct: 307 SAGHARALLGMSDPAAMERLAQRIVAEGLSVRATEEIIALGDDTKPRKSAVPRETNPDLD 366
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
++ K+ + I NKG+ +++ + + L I LG
Sbjct: 367 HWASNLADKLDTRVGITMGKNKGKLTVEFASVDDLNRIMDALG 409
Score = 38.5 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI 25
M++ +R LGRGL ALI +
Sbjct: 1 MND--KRRGLGRGLGALIPNTTEPT 23
>gi|261415840|ref|YP_003249523.1| parB-like partition protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372296|gb|ACX75041.1| parB-like partition protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325810|gb|ADL25011.1| ParB-like protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 332
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 93/332 (28%), Positives = 154/332 (46%), Gaps = 42/332 (12%)
Query: 5 YSKRRLGRGLAALIG---------EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR 55
K+ LGRGL+A+ + + + T + I+I I PNP PR
Sbjct: 1 MGKQALGRGLSAIFKAHDVLGNSVDNAINNTGATENVNTDNQKIVEINIDLIDPNPFQPR 60
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
+F+ + L +L ++I+ HG+IQP+ VR + + Y+II+GERR RA+K+A+ + + +
Sbjct: 61 KFFDDDELVELAETIEKHGLIQPIAVRKVGDR-YQIISGERRTRASKLANCRTIKAQVYD 119
Query: 116 V-DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
D+K+ E A++EN+QR DLNP+E A Y+QLI + YT +D+ VGKSRS + N LR
Sbjct: 120 NLDDKTMSEWALIENIQRVDLNPIEVAQSYQQLIDNHNYTHDDLAKTVGKSRSAITNALR 179
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV--------------------- 213
+LKLP+ V+ I++ +++ G AR L S A
Sbjct: 180 LLKLPNQVQAWIQEGKLAGGAARALCSEKIADPEALAKRVIEEGLNVRQIEAIARGEDPF 239
Query: 214 -------SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS 266
K + + E+D E E L + E ++ + G ++
Sbjct: 240 AQTRDEGETKEAEPENGASTPEEDEMPEVHGSEPRPKPELSADLKNFENRLETFFGTKVA 299
Query: 267 IKHRNN---KGQFCIKYETNEQLKIICSLLGE 295
+ +G I Y + + L I ++
Sbjct: 300 LNPNAKDQTRGTIVINYYSMDDLTRIQEIMDN 331
>gi|147679248|ref|YP_001213463.1| transcriptional regulator [Pelotomaculum thermopropionicum SI]
gi|146275345|dbj|BAF61094.1| predicted transcriptional regulator [Pelotomaculum
thermopropionicum SI]
Length = 288
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 93/293 (31%), Positives = 155/293 (52%), Gaps = 14/293 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS +R LGRGL ALI ++ E I I I P R F+
Sbjct: 1 MS---RRRGLGRGLEALIPAREDAVK---------GEQIQEIEIDQIRPARGQARMSFDG 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L L SIK HG+IQP++VR + G Y++IAGERR+RA M ++P +++ ++
Sbjct: 49 EKLAGLAASIKEHGVIQPVVVRPLREGGYELIAGERRWRACGMLGRKKIPAVVKEYEDIE 108
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ I+++EN+QR+DLNPLEEA+ Y++L++E+ TQ ++ VG+SR +AN++R+L LP
Sbjct: 109 AAAISLIENIQREDLNPLEEAMAYQKLMNEFKMTQAELSERVGRSRPFIANMVRLLSLPE 168
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+++M+ + GHAR L++ +D + + E+ KI
Sbjct: 169 EIKKMLADGRLGAGHARALLAVNDQQKQIAAAEKIAGRQLSVRQAEEIAKKMAEESNKIK 228
Query: 241 -EGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICS 291
E + E+ ++ + EK++ +G + I+ G+ I++E + LK I
Sbjct: 229 NEETAERSSFIREKEKELRDYLGAAVKIRERGKGGGRLEIEFENEDHLKRIVE 281
>gi|89074720|ref|ZP_01161178.1| Putative ParB family protein [Photobacterium sp. SKA34]
gi|89049484|gb|EAR55045.1| Putative ParB family protein [Photobacterium sp. SKA34]
Length = 299
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 94/305 (30%), Positives = 178/305 (58%), Gaps = 20/305 (6%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSI---------VPNPHN 53
N++KR LG+GL AL+ + + + +T + + I S
Sbjct: 1 MNFNKRGLGKGLDALLSTSAVAQAKQQTQQQTSLSTSN---IDSELRELEIELLQSGQFQ 57
Query: 54 PRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVII 113
PR + L +L +SI + GIIQP++VR + + ++IIAGERR++AAK+A L+ VP +I
Sbjct: 58 PRKSMTDDTLAELAESILAQGIIQPIVVRRLADKSFEIIAGERRWQAAKIAGLTTVPCLI 117
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
++VD+++++ IA++EN+QR+DLN +EEA+ +L E+ T I VGKSR+ V+N+L
Sbjct: 118 KSVDDRATIAIALIENIQREDLNVIEEAVALARLQQEFSLTHQQIAEAVGKSRAAVSNLL 177
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDN 231
R+ +L +++++ ++++ +GHAR L+S + AQ I++ ++VR+ E+LV+ N
Sbjct: 178 RLNQLSDPIKQLVEQKKLEMGHARALLSLDESQQLAAAQKIITNLLTVREAEKLVKTLLN 237
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIIC 290
+ + + +T L+ +++ ++G ++I ++ KG+ I +E ++L I
Sbjct: 238 -----PTEPKKPAPQSEQVTQLQNRLTEQLGTKVAINQTKSGKGKIVISFEQQDKLDQIL 292
Query: 291 SLLGE 295
+L +
Sbjct: 293 QMLEQ 297
>gi|171462846|ref|YP_001796959.1| parB-like partition protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192384|gb|ACB43345.1| parB-like partition protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 296
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 97/299 (32%), Positives = 160/299 (53%), Gaps = 16/299 (5%)
Query: 4 NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
K+ LGRGL AL+GE Q + + + + + ++ + PR E+ L
Sbjct: 3 AIKKKGLGRGLEALLGEKTQQANPAAE--------INRLPLSALQAGKYQPRQKMEAAAL 54
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
++L +SI+ G++QPL+VR + Y+IIAGERRFRAA +A L EVPV++ D++++
Sbjct: 55 QELAESIREQGVMQPLLVRLVAPSKYEIIAGERRFRAATIAGLKEVPVLVSGADDQAAAA 114
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+A+VEN+QR+DLNPLEE+ G +LI E+G+T VGKSRS + N+LR+ +L V+
Sbjct: 115 MALVENMQREDLNPLEESQGLARLIEEFGFTHEQAAKAVGKSRSAITNLLRLAQLAKPVQ 174
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLA--------QVIVSKKMSVRDTEELVQEQDNKKEK 235
M+ +I +GHAR L+ +A + V + + + Q K+
Sbjct: 175 SMLLAGDIDMGHARALLPLPGSSQVALAQRVSAQGLSVREAERMTAALVIAGGQIGDKKA 234
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ K S + + L ++I+ +GL+ K + G+ I Y ++L + LG
Sbjct: 235 KSKPGSSSSSADPDMQRLTQEIADLIGLSTEFKLKGKGGELRIHYSQFDELDSLLKKLG 293
>gi|33591280|ref|NP_878924.1| chromosome partitioning protein ParB [Bordetella pertussis Tohama
I]
gi|33570922|emb|CAE40385.1| probable chromosome partitioning protein ParB [Bordetella pertussis
Tohama I]
gi|332380682|gb|AEE65529.1| chromosome partitioning protein ParB [Bordetella pertussis CS]
Length = 305
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 98/295 (33%), Positives = 166/295 (56%), Gaps = 9/295 (3%)
Query: 5 YSKRRLGRGLAALIG-EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+ LGRGL AL+G +V + + + + + + PR + L
Sbjct: 4 KKPKGLGRGLDALLGADVPAIDNIGKAPAAAPEGPPATLPVSKMRAGKYQPRTRMDEGAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAID---NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+L +SI++ GI+QP++VRA+ G Y+II GERRFRAA++A L EVPV++R V +++
Sbjct: 64 NELAESIRTQGIMQPILVRALGADAPGQYEIIVGERRFRAAQLAGLKEVPVLVREVADEN 123
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G +L+ E+G T +G+SRS +N+LR+L L +
Sbjct: 124 AAVMALIENIQREDLNPLEEAHGVRRLLDEFGLTHEQAAQAIGRSRSATSNLLRLLNLAA 183
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L V + + LA +++K++SVR+ E+LV + +
Sbjct: 184 PVQTMLLAGDVDMGHARALLAVDAATQIQLANQVIAKRLSVREAEKLVARAQKDVDAAPR 243
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
++ +T LE+ +S +G +++K KGQ I + E L +
Sbjct: 244 KKGNGASRD--VTRLEEALSDHLGTRVALKVGAREKGQIVIDFHGWEHLNSLLER 296
>gi|332639016|ref|ZP_08417879.1| chromosome segregation DNA-binding protein [Weissella cibaria KACC
11862]
Length = 302
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 91/264 (34%), Positives = 151/264 (57%), Gaps = 3/264 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKI 91
+S +++ IV NP PR+ F+ + L+DL SIK +G++QP+IVR DN Y++
Sbjct: 33 ATNDSVRDLAVDKIVANPFQPRHVFDQDALQDLAASIKENGVLQPVIVRHNPKDNAQYEL 92
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
+AGERR+RA+++A ++EVP I+R +D+ L+ AI+EN+QR+DL PLEEA Y ++
Sbjct: 93 LAGERRWRASQLAGMTEVPAIVRKLDDDQMLQAAILENLQREDLTPLEEAQAYRDMMDAL 152
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
TQ + +GK+RS VAN LR+L LP V++++ ++S+G ARTL+ + + V
Sbjct: 153 KLTQEQVAKRLGKARSAVANFLRLLNLPDEVKDLLNAGDLSMGQARTLLGLRNKRRIVPV 212
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHR 270
+L Q + E+ +G+ E YL + K G +++ ++R
Sbjct: 213 AKRAIAEGMTVRQLEQLVNKLNEQSDPTSKGADEPSAYLKATTAALEDKFGTKVNVTRNR 272
Query: 271 NNKGQFCIKYETNEQLKIICSLLG 294
G+ I Y +++ L I +LG
Sbjct: 273 KGAGKIEIAYLSDDDLNRIFDVLG 296
>gi|184201996|ref|YP_001856203.1| chromosome partitioning protein ParB [Kocuria rhizophila DC2201]
gi|183582226|dbj|BAG30697.1| chromosome partitioning protein ParB [Kocuria rhizophila DC2201]
Length = 333
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 96/298 (32%), Positives = 152/298 (51%), Gaps = 14/298 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S + K RG + E+ E +S+ +I PN PR F+ +
Sbjct: 36 SGSQKKTAANRG--------GDDDHAAEELREVPGAVFAELSVANIHPNRKQPRQVFDED 87
Query: 62 GLEDLCQSIKSHGIIQPLIVRA---IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L S+K G++QP++VR Y+++ GERR+RA + A L +P I+R +
Sbjct: 88 ELAELAFSVKELGVLQPVVVRPSRDEGPERYELVMGERRWRAVQAAGLDTIPAIVRETAD 147
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
L A++EN+ R LNPLEEA Y+QL+ E+G TQ + +G+SR ++N LR+L+L
Sbjct: 148 NDLLRDALLENLHRAQLNPLEEAAAYQQLMQEFGATQEQLSERIGRSRPQISNTLRLLRL 207
Query: 179 PSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P+ V+ + +S GHAR L +D LAQ IV++ +SVR TEE V D K
Sbjct: 208 PALVQRRVAAGVLSSGHARALLALTDPADMERLAQRIVAEGLSVRATEEAVALSDGLKRS 267
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + S + L + S K+ ++ I+ KG+ I++ + E L I +L
Sbjct: 268 KGRRKAPSTRHDDRLGYIADAFSDKLDTSVKIQLGARKGKMTIEFASVEDLNRIIDVL 325
>gi|294672808|ref|YP_003573424.1| ParB-like protein [Prevotella ruminicola 23]
gi|294472170|gb|ADE81559.1| ParB-like protein [Prevotella ruminicola 23]
Length = 309
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 94/295 (31%), Positives = 155/295 (52%), Gaps = 16/295 (5%)
Query: 9 RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQ 68
G GL ALI + + + I+I I PNP PR+ F+ L +L
Sbjct: 22 GRGMGLDALI--------NTNDINTQGTSNLNEIAIELIEPNPDQPRHEFDENALNELAA 73
Query: 69 SIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
SI+ GII P+ VR + +G Y+IIAGERR+RA+++A L +P I+ D+K ++E+A+VE
Sbjct: 74 SIREIGIITPITVREMPSGHYQIIAGERRWRASQLAGLKAIPAYIKTTDDKLTMEMALVE 133
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
N+QR+DLN +E AL Y++L G TQ + +GKSR+ + N +R+LKLP+ ++ ++
Sbjct: 134 NIQREDLNAIEIALAYQRLSESTGMTQERMSERLGKSRTSITNYMRLLKLPAQIQMALKN 193
Query: 189 EEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+I +GHAR L+S P + + + SVR EE+VQ N + +
Sbjct: 194 RDIDMGHARALLSLESPSAQLKLFKDVHRNGYSVRKVEEMVQMVKNGDTLQNARKTVAPN 253
Query: 246 KEK-YLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC---SLLGE 295
+ + L ++S + + +KG+ I + ++L+ I L +
Sbjct: 254 QLPLEYSILRDRLSDLFKTKVQMTCSAQSKGRISISFANEDELEYIMNVFDKLKK 308
>gi|84393408|ref|ZP_00992165.1| ParB family protein [Vibrio splendidus 12B01]
gi|84375924|gb|EAP92814.1| ParB family protein [Vibrio splendidus 12B01]
Length = 293
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 176/296 (59%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + I+I S+ P + PR
Sbjct: 1 MSKRGLGKGLDALLATSSLAREKQQVASHSQALSAEGEFTEIAIGSLKPGVYQPRKDMAP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAA+ A L +VP +++ V++K+
Sbjct: 61 EALEELAASIQSQGIIQPIVVRPLAYGQYEIIAGERRWRAARQAGLKQVPCLVKKVEDKA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V+N+LR+ +L +
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQNEFELTHQQVAEVIGKSRATVSNLLRLNQLEN 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR L + + A +KKM+VR TE+LV++
Sbjct: 181 EVKGLVSNKQLEMGHARALLALEGDTQIEAANTAATKKMTVRQTEQLVKKCLKPD----- 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ S+ ++ +L ++++ K+ +N+S+ + K + I + +L+ + + L
Sbjct: 236 VEPESKPEDTEAIELSRRLTEKLQVNVSVTRSVSGKSKVTITLDEPHKLEQLIAKL 291
>gi|262402094|ref|ZP_06078658.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio sp. RC586]
gi|262351740|gb|EEZ00872.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio sp. RC586]
Length = 293
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 93/298 (31%), Positives = 176/298 (59%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + ++ + +SI ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSTEGELADLSISNLKPGIYQPRKDLSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAAK A L +VP +I+ V++++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRHLSTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNAMEEAQALERLQNEFELTHQQVAEVIGKSRTTVTNLLRLNQLSD 180
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR ++ + +AQ + K+++VR TE+LV++ +
Sbjct: 181 DVKRLLETKQLEMGHARALLMLEGKQQVEIAQQVAKKQLTVRQTEQLVKKCLSGLSD--- 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + ++ + + + +S K+ +SI + N K + I + +L+++ + L
Sbjct: 238 --DKNVSEDLEIRQMSQNLSEKLAAKVSIVRSPNGKSKVTISLDEPHKLELLIAKLQN 293
>gi|322381363|ref|ZP_08055366.1| site-specific DNA-binding protein-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321154939|gb|EFX47210.1| site-specific DNA-binding protein-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 271
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 90/263 (34%), Positives = 157/263 (59%), Gaps = 5/263 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ I + + NP+ PR F +G+++L SIK HG+IQP+IVR++ Y+IIA
Sbjct: 4 EDDDKVIEIPLSKLRANPYQPRKSFNEDGIQELAASIKEHGVIQPIIVRSV-LKGYEIIA 62
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRA++ L +P +++ ++ +EIA++ENVQR+DLN LE A+ Y+ +I ++
Sbjct: 63 GERRFRASQACGLKSIPAVVKKFSDQQVMEIALIENVQREDLNALEIAIAYQAIIDQFSL 122
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQ 210
TQ ++ + VGKSRSH+AN LR+L LP S+++ + + +S+GHAR + LA
Sbjct: 123 TQEELSAKVGKSRSHIANFLRLLTLPDSIKQHVSRGTLSMGHARAIVGVKDNQKKQILAD 182
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+ ++ SVR EE +++ + K ++++ Y+ +E ++ + IKH+
Sbjct: 183 ACIREQWSVRQLEEEIKKLEGN-SGNAKKKSKDKKRDPYIQQVEDQLRDVYRTTVKIKHQ 241
Query: 271 NNKGQFCIKYETNEQLKIICSLL 293
NKG+ + Y +N+ L+ + +L
Sbjct: 242 KNKGKIELLYYSNDDLERLLDML 264
>gi|229164430|ref|ZP_04292358.1| Stage 0 sporulation protein J [Bacillus cereus R309803]
gi|228619035|gb|EEK75933.1| Stage 0 sporulation protein J [Bacillus cereus R309803]
Length = 273
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 97/268 (36%), Positives = 158/268 (58%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEIIVTELRPNPYQPRKHFNKEAIQELATSIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H R T+ SL +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQSVSRETKPVK--KERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLSQEN 273
>gi|333025727|ref|ZP_08453791.1| putative ParB [Streptomyces sp. Tu6071]
gi|332745579|gb|EGJ76020.1| putative ParB [Streptomyces sp. Tu6071]
Length = 318
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 86/288 (29%), Positives = 153/288 (53%), Gaps = 9/288 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQ----DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
+V++ E++ P + + + I+PN PR F+ + L +L SIK G
Sbjct: 12 SDVSRETSESEQRGGLPPAPEGAFFAELPLDQIIPNRDQPRAIFDEDALRELIDSIKEVG 71
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
++QP++VR +D +++I GERR RA+K A L+ +P I+R ++ L A++EN+ R
Sbjct: 72 LLQPVVVRQLDEKQFELIMGERRMRASKEAGLTTIPAIVRATEDDRLLLDALLENLHRSQ 131
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
L PLEEA YEQL+ ++ T ++ VG+SR V N LR+LKL SV++ + +S G
Sbjct: 132 LTPLEEAHAYEQLLKDFNCTHEELAKRVGRSRPQVTNTLRLLKLSPSVQKKVDAGVLSAG 191
Query: 195 HARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS--REKEKY 249
HAR L+ +++ LA+ I+ + +SVR EE+ + K +
Sbjct: 192 HARELLSVEDSTEQDKLAERIIREGLSVRAVEEITHLMRSHPGPAKSTPKPRAGSVTSPA 251
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
L++L ++S + + + KG+ +++ + + L+ I S L ++
Sbjct: 252 LSELAGRLSDRFETRVKVDLGQKKGKIVVEFASVDDLQRILSQLAPDE 299
>gi|15639263|ref|NP_218712.1| chromosome partitioning protein (parB) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025505|ref|YP_001933277.1| chromosome partitioning protein [Treponema pallidum subsp. pallidum
SS14]
gi|12230422|sp|O83295|PARB_TREPA RecName: Full=Probable chromosome-partitioning protein parB
gi|3322544|gb|AAC65259.1| chromosome partitioning protein (parB) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018080|gb|ACD70698.1| chromosome partitioning protein [Treponema pallidum subsp. pallidum
SS14]
gi|291059674|gb|ADD72409.1| probable chromosome-partitioning protein ParB [Treponema pallidum
subsp. pallidum str. Chicago]
Length = 324
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 98/325 (30%), Positives = 161/325 (49%), Gaps = 38/325 (11%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K +LG+G+ AL+ E + D + ++ + + NPH R F E LE
Sbjct: 1 MGKDKLGKGIDALLQESSDRYDVRDSGG---VQTVHYLDPTLLQANPHQARRTFAQESLE 57
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ HG+IQP++ +G + IIAGERR RAA +A L+ +PVI+R D++ L I
Sbjct: 58 ELAASIREHGVIQPVLAEKNQDGSWVIIAGERRTRAAILAGLNRIPVIVRTCDHEKKLAI 117
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++ENVQR++LNPLEEA Y+ ++ + ++ VGK+RS + N LR+LKLP V++
Sbjct: 118 ALIENVQRENLNPLEEARAYQHIMDLGNLSHEELAQRVGKNRSTITNALRLLKLPPEVQQ 177
Query: 185 MIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ +S GHAR +L +S+AQ +V+ +SVR EE V +
Sbjct: 178 SLSSRTLSAGHARALLSLTDMQLCVSVAQYVVTHALSVRAAEECVACLNRGGSLHDYAGA 237
Query: 242 G--------------------------------SREKEKYLTDLEKKISSKVGLNISIKH 269
+R + + D+E+++ ++G + I
Sbjct: 238 RAHTAASSPSPGGSATDITRLPPSSPSTDAQLDARIRNADIADIEQQLLEQLGTKVRISG 297
Query: 270 RNNKGQFCIKYETNEQLKIICSLLG 294
+G+ I Y + +L+ + LL
Sbjct: 298 NLQRGRIEITYFSQAELERLYGLLK 322
>gi|42521015|ref|NP_966930.1| ParB family protein [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58696834|ref|ZP_00372358.1| ParB family protein [Wolbachia endosymbiont of Drosophila simulans]
gi|58698193|ref|ZP_00373114.1| ParB family protein [Wolbachia endosymbiont of Drosophila
ananassae]
gi|99035090|ref|ZP_01314878.1| hypothetical protein Wendoof_01000284 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225630883|ref|YP_002727674.1| Chromosome partitioning protein, ParB family [Wolbachia sp. wRi]
gi|225677203|ref|ZP_03788196.1| Chromosome partitioning protein, ParB family [Wolbachia
endosymbiont of Muscidifurax uniraptor]
gi|42410756|gb|AAS14864.1| ParB family protein [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58535274|gb|EAL59352.1| ParB family protein [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58536964|gb|EAL60126.1| ParB family protein [Wolbachia endosymbiont of Drosophila simulans]
gi|225590727|gb|EEH11961.1| Chromosome partitioning protein, ParB family [Wolbachia
endosymbiont of Muscidifurax uniraptor]
gi|225592864|gb|ACN95883.1| Chromosome partitioning protein, ParB family [Wolbachia sp. wRi]
Length = 283
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 117/288 (40%), Positives = 183/288 (63%), Gaps = 15/288 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
RRLGRGLA LIG+ + + Q+ + I + P+ PR +F+ E L +L
Sbjct: 5 RRLGRGLAGLIGD----------NYDNKEDRQEHLPISLLHPSKFQPRKHFDEESLRELA 54
Query: 68 QSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SIK GIIQP++VR N Y+IIAGERR+RA+K+A+L PVII+++ +K LE++I
Sbjct: 55 NSIKKSGIIQPIVVRKDSNDDGYEIIAGERRWRASKIANLDSAPVIIKDLSDKECLEVSI 114
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+D+NP+EE Y +LI E+ YT ++ S +GKSRSH+ N++R+L LP V+ MI
Sbjct: 115 IENIQRQDINPIEEGEAYRKLIDEFFYTHEELASAIGKSRSHITNMIRMLLLPDRVKTMI 174
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
++++S+GHAR L++ + S+A+ IVS+ +SVR TE+L+ + E +
Sbjct: 175 NEKKLSMGHARALINVENAESIAEKIVSQGLSVRQTEKLI----KDLHQNNNQKEQRYTR 230
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ +T +E ISS++GL I I N+KG+ I+Y+ +L +I +L
Sbjct: 231 NQDMTVIEGAISSQLGLKIKINDNNSKGKVMIRYDNPNELDLILKILN 278
>gi|87310582|ref|ZP_01092711.1| probable chromosome partitioning protein parB [Blastopirellula
marina DSM 3645]
gi|87286803|gb|EAQ78708.1| probable chromosome partitioning protein parB [Blastopirellula
marina DSM 3645]
Length = 319
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 89/278 (32%), Positives = 146/278 (52%), Gaps = 7/278 (2%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ E + E + + I NP+ PR F E + +L QS++ H ++QP+ V
Sbjct: 32 EPIPSAAPAPEEFVGERLIKLPVEEIEANPYQPRQEFNDEEIAELAQSLRQHDMLQPIAV 91
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
R ID Y++I+GERR RAA +A VPV + D+++ E+AIVEN+QRKDLN +E+A
Sbjct: 92 RQIDGR-YQLISGERRLRAAIVAGWDHVPVRVFEADDQTVAELAIVENLQRKDLNAIEKA 150
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---T 198
+ +E+ + E G +Q+++ +G RS VAN++R+L+LP V + E++ GHAR
Sbjct: 151 MSFERYMHENGCSQSELAERIGIDRSTVANLVRLLELPEPVLTSVMMGELTAGHARALLP 210
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQ---EQDNKKEKRKKIFEGSREKEKYLTDLEK 255
L + A+ I + SVR EE VQ ++ KK + R + LE+
Sbjct: 211 LGEEGIQVEFARRIFDEGWSVRAAEEAVQDFIHAEDGPATIKKPVKKGRTASDQVASLEQ 270
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +G + IK G+ + ++ NE+ + L
Sbjct: 271 EFRMALGTKVDIKQTARGGKIVLHFKGNEEFDRLRDYL 308
>gi|282892466|ref|ZP_06300800.1| hypothetical protein pah_c260o010 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281497748|gb|EFB40112.1| hypothetical protein pah_c260o010 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 284
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 86/275 (31%), Positives = 145/275 (52%), Gaps = 4/275 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+NQ ++ + E + + I NP PR F E L++L SIK+ GI+ P +
Sbjct: 1 MNQVVEKKNNEETFYQEELVEVQLSQIQVNPFQPRRNFSEEELDELACSIKAVGILHPPL 60
Query: 81 ----VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
+ Y+II+GERR RAA++A L+ + V++RN + S + A++ENVQR DLN
Sbjct: 61 VRLVTNEANEKKYEIISGERRCRAAQIAGLTTLKVVVRNSCEQLSAQAALIENVQRVDLN 120
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+E A + L+ E+G++Q+++ +GK RS V+N LR+L LP +++ + K I++GHA
Sbjct: 121 PIEVAKALKSLMLEFGFSQDELAGRIGKKRSTVSNYLRLLTLPKYIQDDVSKNVITMGHA 180
Query: 197 RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ ++S D + E Q +EK KK ++ +L L +K
Sbjct: 181 KAILSQPDLEKQHLLYELILRDELTVREAEQASLRIQEKAKKNALVYANRDFFLEQLSEK 240
Query: 257 ISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICS 291
+ K+G + I + KG+ I Y + + L + S
Sbjct: 241 LQRKLGTKVHILGKGKKGRITIDYYSLDDLDRVLS 275
>gi|325832262|ref|ZP_08165261.1| putative stage 0 sporulation protein J [Eggerthella sp. HGA1]
gi|325486098|gb|EGC88552.1| putative stage 0 sporulation protein J [Eggerthella sp. HGA1]
Length = 349
Score = 132 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 96/345 (27%), Positives = 155/345 (44%), Gaps = 53/345 (15%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTE--------------------------- 33
M+ +K LGRGL +L+G + E +
Sbjct: 1 MAKA-NKSGLGRGLNSLLGGAFEEAAPLESTPKRVLVEQQREETVVPIPMHTEPVVERQN 59
Query: 34 -------------------------TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQ 68
+ D + I S+ PNP PR F+ E LE+L
Sbjct: 60 VSRETITPMKEESIVDGESQVTIKSVVQRRTDEVPIESVSPNPDQPRTNFKREALEELAA 119
Query: 69 SIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
SI+ G++QP++VR + Y+IIAGERR++A K+ L VPV I++ D+ +LE+A+VE
Sbjct: 120 SIEKDGLLQPILVRPVGTNEYQIIAGERRWQACKIVGLKTVPVRIKDADDDQALELALVE 179
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
N+QR DLNP+EEA GY +++ TQ+++ + K RS VAN LR+L+LP ++++ +
Sbjct: 180 NIQRSDLNPIEEAYGYRRMMERRNLTQSEVAQAMSKGRSTVANALRLLELPEEAQQLLFE 239
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
E+IS GHAR ++S ++ E KR K
Sbjct: 240 EKISAGHARAILSIPTKEGRQKLTDKLVAEKLTVREAEAIARLFSGKRNDAPTKKEPLPK 299
Query: 249 YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ K + + + +K N K + I+++ E L+ + L
Sbjct: 300 MFKTVAKALKDVLHTPVKVKSSNGKNKIEIEFQDEEDLERLFEEL 344
>gi|320532823|ref|ZP_08033600.1| ParB-like partition protein [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320134974|gb|EFW27145.1| ParB-like partition protein [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 359
Score = 132 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 87/282 (30%), Positives = 144/282 (51%), Gaps = 9/282 (3%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ Q + I + I PNP PR F+ E + +L SI G++QP+
Sbjct: 76 DGQQDSADTDGLVPVPGARFAEIPVELIHPNPRQPRQVFDEEDISELAASIAEVGLLQPI 135
Query: 80 IVRAID-----NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
+VR + Y++I GERR RA+K A L +P ++R+ D+ L A++EN+ R
Sbjct: 136 VVRQVPTASGEEQRYELIMGERRLRASKEAGLETIPAVVRDTDDVDLLRDALLENLHRVQ 195
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
LNPLEEA Y+QL+ ++ T ++ + +SRS ++N LR++KLP V+ + IS G
Sbjct: 196 LNPLEEAAAYQQLLEDFQCTHAELSERIARSRSQISNTLRLMKLPPLVQRRLAANVISAG 255
Query: 195 HART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
HAR L + ++ LAQ +V++ +SVR TEELV + + + + + R + L
Sbjct: 256 HARALLGLPNAAEMERLAQRVVAEGLSVRATEELVALHEEPEPESGQP-KVLRARSTPLP 314
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
L ++S + + KG+ I++ E L + L
Sbjct: 315 ALSTRLSDAFDTRVKVTRGAKKGRITIEFAGEEDLARLVDAL 356
>gi|223983433|ref|ZP_03633619.1| hypothetical protein HOLDEFILI_00899 [Holdemania filiformis DSM
12042]
gi|223964605|gb|EEF68931.1| hypothetical protein HOLDEFILI_00899 [Holdemania filiformis DSM
12042]
Length = 291
Score = 132 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 93/293 (31%), Positives = 161/293 (54%), Gaps = 10/293 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M + ++ LG+GL A+ G+ + E+ + Q I + I PNP+ PR F+
Sbjct: 1 MKKDEAR--LGKGLGAIFGD--DLSNVIEEIQQGDESRQSEIKLSEIRPNPYQPRKIFDD 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E + +L QSIK HG+ P+++R Y++IAGERR RA+K A L +P I+ +
Sbjct: 57 EKIGELAQSIKEHGVFTPVLLRK-SVKGYELIAGERRVRASKKAGLKTIPAIVMEFTEEQ 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EI+++EN+QR+DLN +EEA Y++LI YTQ + VGKSR H+ N LR+LKLP
Sbjct: 116 MMEISLLENIQREDLNAIEEAQAYQRLIERLDYTQEKLAQRVGKSREHITNTLRLLKLPK 175
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
SV++++ + ++S+GH R LV+ D A + K + V+ +++++ K
Sbjct: 176 SVQQLVTENKLSMGHVRPLVTIEDEGE-AYDLAMKIAEEGLSVREVERLVKERQEKPKPK 234
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++ L +E+ + +++ + + + Q I+Y + L I L+
Sbjct: 235 AAKKAEDPNLLYVEEVMQNRLQTRVKVDKK----QIVIQYSGTQDLNRILELI 283
>gi|266620963|ref|ZP_06113898.1| stage 0 sporulation protein J [Clostridium hathewayi DSM 13479]
gi|288867385|gb|EFC99683.1| stage 0 sporulation protein J [Clostridium hathewayi DSM 13479]
Length = 313
Score = 132 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 184/316 (58%), Gaps = 26/316 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGE-----------------VNQSIDSPEKKTETIPESQDCIS 43
M+ + LG+GL A+ G+ + + +K+ E + +
Sbjct: 1 MA---KRTGLGKGLGAIFGDEVMESAAEEQEAKHQAKSKSAQEPEKKEEENDIGKELMVK 57
Query: 44 IHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKM 103
+ +I PN PR F E +E+L +S+K +G++QPL+V+ Y+IIAGERR+RAAK+
Sbjct: 58 VTAIEPNREQPRKDFNEEAMEELAESMKVYGVLQPLLVQKKG-DYYEIIAGERRWRAAKL 116
Query: 104 ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVG 163
A L EVPV+IR + ++EIA++ENVQR+DLNP+EEA Y++LI E+ Q +I + VG
Sbjct: 117 AGLKEVPVVIREYTKQQTMEIALIENVQREDLNPIEEAKAYQRLIQEFELKQEEIAARVG 176
Query: 164 KSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSD---PLSLAQVIVSKKMSVR 220
K+R + N +R+LKL V++++ + +I+ GHAR L+S D LA I+++ +SVR
Sbjct: 177 KNRVTITNSMRLLKLDERVQDLLIQNQITGGHARALLSVEDGQLQYELAGKIIAENLSVR 236
Query: 221 DTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIK 279
+TE+LV+ KK ++K E DLE+++ S +G +SI + NKG+ I+
Sbjct: 237 ETEKLVKSLSKKKNPKEKKVED-ESLTLIFHDLEERMKSAMGTKVSINRKDKNKGRVEIE 295
Query: 280 YETNEQLKIICSLLGE 295
Y + +L+ I L+
Sbjct: 296 YYSESELERIVELIES 311
>gi|329891183|ref|ZP_08269526.1| chromosome-partitioning protein parB [Brevundimonas diminuta ATCC
11568]
gi|328846484|gb|EGF96048.1| chromosome-partitioning protein parB [Brevundimonas diminuta ATCC
11568]
Length = 260
Score = 132 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 102/253 (40%), Positives = 159/253 (62%), Gaps = 2/253 (0%)
Query: 43 SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRA 100
I ++ PNP PR F L++L SI+ G++QP++VR+ ++IIAGERR+RA
Sbjct: 5 PIEALKPNPDQPRKIFAKTDLDELTASIRDKGVLQPILVRSQPGEQGVWQIIAGERRWRA 64
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
A+ A L++VP+++R +D+ LE+ ++ENVQR DLNP+EEA Y L+ +G TQ+ +
Sbjct: 65 AQAARLTQVPIVVREMDDIEVLEVGVIENVQRADLNPMEEANAYAVLMERFGRTQDALAG 124
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
+VGKSRSHVAN LR+L+LP +VRE + + E+S GHAR L++ + LA ++++ ++VR
Sbjct: 125 VVGKSRSHVANTLRLLQLPEAVREHVVRGELSAGHARALITAPNAEQLAAEVIARGLNVR 184
Query: 221 DTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKY 280
TE L + + K S E + LE+ +S +GL +S+ + KG+ +KY
Sbjct: 185 QTEALARRAAEGPKTPKAKPTMSGEGAADIAALEQDLSDALGLQVSLADKGGKGEITVKY 244
Query: 281 ETNEQLKIICSLL 293
T EQL +C L
Sbjct: 245 GTLEQLDDLCRRL 257
>gi|313124632|ref|YP_004034891.1| stage 0 sporulation protein j [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312281195|gb|ADQ61914.1| Stage 0 sporulation protein J [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 296
Score = 132 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 97/273 (35%), Positives = 157/273 (57%), Gaps = 8/273 (2%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
E+ E + + + + PNP+ PR F+ + L +L +SIK +G++QP+IV G
Sbjct: 25 EEEPQVKPAEEIEDLPLAEVRPNPYQPRKNFDEKKLAELAESIKENGVLQPIIV-RRSVG 83
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y+IIAGERR RA+++A + +P IIR D +E+AI+EN+QR+DL PLEEA YE L
Sbjct: 84 GYEIIAGERRCRASQLAGQATIPAIIRQFDESQMMEVAILENLQREDLTPLEEAQAYEML 143
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSD 204
G TQ ++ +GKSR ++ N LR+L LP + ++++ E+S+G ART L
Sbjct: 144 QKNLGLTQEEVSKKMGKSRPYITNYLRLLTLPQKTKGLLQRGELSMGQARTLLGLKDKDR 203
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
LA+ +V + M VR E LV + + + +K + + K ++ E ++++K G
Sbjct: 204 IDELAKRVVKEGMPVRKVEALVAKMNE---RGQKQKKKNAGKSAFVRASESQLAAKFGSP 260
Query: 265 ISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+SI ++ KG I + + ++L I LLG N
Sbjct: 261 VSITENKTGKGHLSIDFASPDELNRILDLLGVN 293
>gi|291288866|ref|YP_003505682.1| parB-like partition protein [Denitrovibrio acetiphilus DSM 12809]
gi|290886026|gb|ADD69726.1| parB-like partition protein [Denitrovibrio acetiphilus DSM 12809]
Length = 280
Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 100/293 (34%), Positives = 153/293 (52%), Gaps = 20/293 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LG+GL +LI K E+ + I I I PNP PR F+ E L
Sbjct: 1 MKKNPLGKGLESLIP-----------KAESTRTIINEIDIADIKPNPEQPRKVFDEEALS 49
Query: 65 DLCQSIKSHGIIQP-LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSL 122
+L SI+ +G+IQP ++ + G Y IIAGERR+RAA +A L VP ++R L
Sbjct: 50 ELTDSIRRNGVIQPLVLAAGEEEGEYIIIAGERRWRAAGLAGLRRVPAVVRVLTHETEKL 109
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR+DL PLE A Y+ L+ + Y Q D+ +VGKSRS VAN +R+L LP V
Sbjct: 110 ELALIENIQREDLGPLELARAYKNLMDTHDYRQEDVADVVGKSRSAVANTIRLLGLPEKV 169
Query: 183 REMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ + IS GHAR L+ + + I+ +SVRD E+LV +++ ++
Sbjct: 170 IMALEEGLISEGHARALIGLDEKKAVEILFKIIDNSLSVRDVEKLVSKKEREQIMH---- 225
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ ++ L+ ++ I IK G I+Y +++ L I +
Sbjct: 226 -KEEDENIFVMSLKAEMEEFFRTKIEIKPGKKGGTINIRYSSDDDLDRIIKTI 277
>gi|229035137|ref|ZP_04189083.1| Stage 0 sporulation protein J [Bacillus cereus AH1271]
gi|228728203|gb|EEL79233.1| Stage 0 sporulation protein J [Bacillus cereus AH1271]
Length = 273
Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 99/268 (36%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I+I + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEIAITELRPNPYQPRKHFNKEAIQELAASIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNI 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H RTL++ D L +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + + K + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQRVSRETKQVK--KERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLAQKN 273
>gi|312623577|ref|YP_004025190.1| parb-like partition protein [Caldicellulosiruptor kronotskyensis
2002]
gi|312204044|gb|ADQ47371.1| parB-like partition protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 285
Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 103/290 (35%), Positives = 160/290 (55%), Gaps = 11/290 (3%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPES---QDCISIHSIVPNPHNPRNYFESEGL 63
K+RLGRGL AL GE S + + E E+ + I I I + + PR F E +
Sbjct: 2 KKRLGRGLDALFGEDFVSSEIESEVVEDKNENSEKIEEIDIDLIDLSENQPRKVFNDEEI 61
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SIKS G+IQPL+V+ Y +IAGERR RA K A +V I++ +N +
Sbjct: 62 EELANSIKSVGLIQPLVVQK-KADRYVLIAGERRLRACKFAGFKKVKCIVKEYENPLEIA 120
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ +EN+QRKDLNP E+AL +++L+ E+GYTQ ++G +G SRS +AN LRIL L + +
Sbjct: 121 L--IENIQRKDLNPYEKALAFKKLMDEFGYTQEELGKRLGISRSKIANTLRILNLGNDII 178
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+I + +IS GHA+ L+S D ++ +L + EK K E
Sbjct: 179 NLILEGKISEGHAKVLLSIEDERQRNELAQLVAEKNLSVRDLENLIKSSNEKNKIEVESE 238
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+E + + GL + I+ + N+G+ I++ ++E+L+ I S+L
Sbjct: 239 IIREIE-----ENLMKLFGLKVKIQKKKNRGKIEIEFSSDEELEKIISIL 283
>gi|222530694|ref|YP_002574576.1| parB-like partition protein [Caldicellulosiruptor bescii DSM 6725]
gi|222457541|gb|ACM61803.1| parB-like partition protein [Caldicellulosiruptor bescii DSM 6725]
Length = 285
Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 104/290 (35%), Positives = 160/290 (55%), Gaps = 11/290 (3%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPES---QDCISIHSIVPNPHNPRNYFESEGL 63
K+RLGRGL AL GE S + + E E+ + I I I + + PR F E +
Sbjct: 2 KKRLGRGLDALFGEDFVSSEMESEVVEDKNENSEKIEEIDIDLIDLSENQPRKVFNDEEI 61
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SIKS G+IQPL+V+ Y +IAGERR RA K A +V I++ +N +
Sbjct: 62 EELANSIKSVGLIQPLVVQK-KADRYVLIAGERRLRACKFAGFKKVKCIVKEYENPLEIA 120
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ +EN+QRKDLNP E+AL +++L+ E+GYTQ ++G +G SRS +AN LRIL L + +
Sbjct: 121 L--IENIQRKDLNPYEKALAFKKLMDEFGYTQEELGKRLGISRSKIANTLRILNLGNDII 178
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+I + +IS GHA+ L+S D ++ EL + EK K E
Sbjct: 179 NLIIEGKISEGHAKVLLSVEDERQRNELAQLVAEKNLSVRELENLIKSSNEKNKIEVESE 238
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+E + + GL + I+ + N+G+ I++ ++E+L+ I S+L
Sbjct: 239 IIREIE-----ENLMKLFGLKVKIQKKKNRGKIEIEFSSDEELEKIISIL 283
>gi|269798901|ref|YP_003312801.1| parB-like partition protein [Veillonella parvula DSM 2008]
gi|269095530|gb|ACZ25521.1| parB-like partition protein [Veillonella parvula DSM 2008]
Length = 309
Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 92/299 (30%), Positives = 158/299 (52%), Gaps = 11/299 (3%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S LG+GL L+ + P+K+ + I +VPN PR F+ +
Sbjct: 7 SKKSKASGLGKGLENLMKVDSVESVLPDKE-------IHELPISELVPNVDQPRKSFDED 59
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L L +SIK+ GI QP++VR N Y+I+AGERR+RAA +A L VPVI++ + +
Sbjct: 60 SLATLAESIKNLGIFQPIVVRKQKNK-YQIVAGERRYRAAMIAGLKTVPVIVKKYNTEEM 118
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
E+A+VEN+QR+ L+P+EEAL Y+ L+ Y TQ I + +G+SRS++AN++R+LKL S
Sbjct: 119 TEVALVENLQREGLDPIEEALAYQGLMDTYKQTQEMISARLGRSRSYIANMVRLLKLCDS 178
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
V++ + + ++++G AR L++ + K + + + K K
Sbjct: 179 VQKDLIEGDLTVGQARPLLALRSAAQQMEAAERIKEGELSARQAEALVKSMQNKSSKAKA 238
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNK---GQFCIKYETNEQLKIICSLLGEND 297
G + + L ++ +G ++IK R K G+ I + + +L+ + + + D
Sbjct: 239 GKTQNTAEVRALMDRLKLSLGSPVNIKFRAGKKVQGKIEIAFSSEAELERLITYMDGQD 297
>gi|300812322|ref|ZP_07092758.1| ParB-like protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496742|gb|EFK31828.1| ParB-like protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|325684929|gb|EGD27073.1| chromosome partitioning protein SpoOJ [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 296
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 97/273 (35%), Positives = 157/273 (57%), Gaps = 8/273 (2%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
E+ E + + + + PNP+ PR F+ + L +L +SIK +G++QP+IV G
Sbjct: 25 EEEPQVKPAEEIEDLPLAEVRPNPYQPRKNFDEKKLAELAESIKENGVLQPIIV-RRSVG 83
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y+IIAGERR RA+++A + +P IIR D +E+AI+EN+QR+DL PLEEA YE L
Sbjct: 84 GYEIIAGERRCRASELAGQATIPAIIRQFDESQMMEVAILENLQREDLTPLEEAQAYEML 143
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSD 204
G TQ ++ +GKSR ++ N LR+L LP + ++++ E+S+G ART L
Sbjct: 144 QKNLGLTQEEVSKKMGKSRPYITNYLRLLTLPQKTKGLLQRGELSMGQARTLLGLKDKDR 203
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
LA+ +V + M VR E LV + + + +K + + K ++ E ++++K G
Sbjct: 204 IDELAKRVVKEGMPVRKVEALVAKMNE---RGQKQKKKNAGKSAFVRASESQLAAKFGSP 260
Query: 265 ISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+SI ++ KG I + + ++L I LLG N
Sbjct: 261 VSITENKTGKGHLSIDFASPDELNRILDLLGVN 293
>gi|318058978|ref|ZP_07977701.1| ParB-like protein [Streptomyces sp. SA3_actG]
gi|318077332|ref|ZP_07984664.1| ParB-like protein [Streptomyces sp. SA3_actF]
Length = 302
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 83/262 (31%), Positives = 144/262 (54%), Gaps = 5/262 (1%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ + I+PN PR F+ + L +L SIK G++QP++VR +D +++I GERR RA
Sbjct: 19 ELPLDQIIPNRDQPRAIFDEDALRELIDSIKEVGLLQPVVVRQLDEKQFELIMGERRMRA 78
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
+K A L+ +P I+R ++ L A++EN+ R L PLEEA YEQL+ ++ T ++
Sbjct: 79 SKEAGLTTIPAIVRATEDDRLLLDALLENLHRSQLTPLEEAHAYEQLLKDFNCTHEELAK 138
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKM 217
VG+SR V N LR+LKL SV++ + +S GHAR L+ +++ LA+ I+ + +
Sbjct: 139 RVGRSRPQVTNTLRLLKLSPSVQKKVDAGVLSAGHARELLSVEDSTEQDKLAERIIREGL 198
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEGS--REKEKYLTDLEKKISSKVGLNISIKHRNNKGQ 275
SVR EE+ + K + L++L ++S + + + KG+
Sbjct: 199 SVRAVEEITHLMRSHPGPAKSTPKPRAGSVTSPALSELAGRLSDRFETRVKVDLGQKKGK 258
Query: 276 FCIKYETNEQLKIICSLLGEND 297
+++ + + L+ I S L ++
Sbjct: 259 IVVEFASVDDLQRILSQLAPDE 280
>gi|332286170|ref|YP_004418081.1| chromosome partitioning protein [Pusillimonas sp. T7-7]
gi|330430123|gb|AEC21457.1| chromosome partitioning protein [Pusillimonas sp. T7-7]
Length = 306
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 106/299 (35%), Positives = 170/299 (56%), Gaps = 9/299 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL AL+GE +I S + E + + + + + PR +
Sbjct: 1 MATRKPK-GLGRGLDALLGEDAGAISSL-GQPEPQNKLPSTLKLGLLYAGKYQPRTRMDE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRA---IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
L +L SI++ GI+QP++VR D G Y+IIAGERRFRAAK+A L+EVPV++R V
Sbjct: 59 GALNELADSIRTQGIMQPILVRPLDGKDKGKYEIIAGERRFRAAKLAGLTEVPVLVREVA 118
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++++ +A++EN+QR+DLNPLEEA G +L+ E+G T + +G+SR +N+LR+L
Sbjct: 119 DENAAVMALIENIQREDLNPLEEAHGVRRLLDEFGLTHDQAAQAIGRSRPATSNLLRLLN 178
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQE-QDNKKE 234
L + V+ M+ +I +GHAR L++T + A +++K++SVR+TE+LV +
Sbjct: 179 LAAPVQTMLLAGDIDMGHARALLATDAATQILLANEVIAKRLSVRETEKLVSRSLQAVDD 238
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
K + LE+ +S +G +S+K NKGQ I + + L +
Sbjct: 239 KAILPKRRGSAQNGDAKRLEEALSDHLGTRVSLKIGAKNKGQLQIDFHGWDHLNALLER 297
>gi|121602986|ref|YP_980315.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
gi|120591955|gb|ABM35394.1| chromosome segregation DNA-binding protein [Polaromonas
naphthalenivorans CJ2]
Length = 311
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 98/306 (32%), Positives = 172/306 (56%), Gaps = 19/306 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKK--TETIPESQDCISIHSIVPNPHNPRNYFESEG 62
++ LGRGL AL+G + P + + +VP + PR +
Sbjct: 4 KKQKGLGRGLEALLGPKVDESPEAANALIAASSPGLPASLLLDDLVPGQYQPRTRMDEGA 63
Query: 63 LEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L +SIK GI+QP++VR ++G Y+IIAGERRFRAA++A L +PV+IR+V +
Sbjct: 64 LYELAESIKVQGIMQPILVRRLKSGSNSGKYEIIAGERRFRAARLAGLDSLPVLIRDVPD 123
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+S+ ++++EN+QR+DLNPLEEA G ++L+ E+G T VG+SRS +N+LR+L L
Sbjct: 124 ESAAAMSLIENIQREDLNPLEEAQGLQRLVKEFGLTHELAAQAVGRSRSAASNLLRLLNL 183
Query: 179 PSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+ M+ ++ +GHAR L+ + ++ A I +KK+SVR+ E LV++ ++
Sbjct: 184 ADPVQTMLMAGDLDMGHARALLALDRATQITAANQITAKKLSVREAESLVKKLGSEF--S 241
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIK-----HRNNK----GQFCIKYETNEQLK 287
+ EK + +E++++ + + ++ RN K G+ I++ + +++
Sbjct: 242 LTPNKAPPEKSRDTRRVEEELADLLMAEVQVRIKKQVKRNGKREDVGELAIQFASLDEVN 301
Query: 288 IICSLL 293
+ L
Sbjct: 302 GLIERL 307
>gi|229065138|ref|ZP_04200431.1| Stage 0 sporulation protein J [Bacillus cereus AH603]
gi|228716167|gb|EEL67886.1| Stage 0 sporulation protein J [Bacillus cereus AH603]
Length = 273
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 96/268 (35%), Positives = 158/268 (58%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEIIVTELRPNPYQPRKHFNKEAIQELAASIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H R T+ SL +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + ++ + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEQIVQEINQ--RVSRETQQVKKERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLSKGN 273
>gi|255534897|ref|YP_003095268.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Flavobacteriaceae bacterium
3519-10]
gi|255341093|gb|ACU07206.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Flavobacteriaceae bacterium
3519-10]
Length = 295
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 95/293 (32%), Positives = 157/293 (53%), Gaps = 5/293 (1%)
Query: 6 SKRRLGRGLAALIGEVNQSI--DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
KR +GRGL A++ +++ + + + + + + I PN PR YF+ +GL
Sbjct: 4 KKRAMGRGLGAILSAESKASVNSATDAGADRFVGNIVQVPLEDIYPNASQPRTYFDEKGL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
++L QSIK+ GIIQ I D G ++II+GERRFRA+KMA L VP IR V+++ LE
Sbjct: 64 QELAQSIKNLGIIQ-PITLRKDGGKFEIISGERRFRASKMAGLETVPAYIRLVNDQELLE 122
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+A+VEN+QR+DL+ +E AL Y++L+ E G TQ ++ VGK RS + N +R+L+L V+
Sbjct: 123 MALVENIQREDLDAIEIALTYQRLLEEIGMTQENLSQRVGKERSSITNSIRLLRLNPEVQ 182
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ IR EIS GH R ++S ++ + + +E K +
Sbjct: 183 DAIRSGEISAGHGRAIISLEGSELQNELFQKILTNKLSVRQAEEESARLKNTANTEKKPK 242
Query: 244 REKEKYLTDLEKKISSKVGLNISIK--HRNNKGQFCIKYETNEQLKIICSLLG 294
+ EK ++ + + + IK KG+ + ++ ++L+ I S
Sbjct: 243 AALPNHFRKAEKNLADILDVKVEIKAAANGKKGKIVLDFKNEQELENILSHFK 295
>gi|253702626|ref|YP_003023815.1| parB-like partition protein [Geobacter sp. M21]
gi|251777476|gb|ACT20057.1| parB-like partition protein [Geobacter sp. M21]
Length = 279
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 156/293 (53%), Gaps = 19/293 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LG+G+ AL+ E + I I PN PR F +E LE
Sbjct: 2 VKKMGLGKGMGALLP-----------VVEDHGKKYFSCPIEEIRPNKEQPRKTFVNEKLE 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ GIIQPL+V G Y++IAGERR+RAA+ A L EVPV+I++V +++LE+
Sbjct: 51 ELAASIREKGIIQPLVV-LRKAGHYELIAGERRWRAAQKAGLREVPVVIQDVSEETALEM 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +EEA Y L+ + +Q ++ VGK RS +AN LR+L+LP ++
Sbjct: 110 ALIENIQREDLNAVEEAEAYHALLERFSLSQEELAKRVGKERSTIANALRLLRLPDEIKR 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ +E IS+GHAR L++ DP IV +SVR+TE LV+ +
Sbjct: 170 DVAEERISMGHARALLTLEDPEEQKAARDEIVKNHLSVRETEALVKRKKA----GPAKKP 225
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ DL ++ G +++K G+ I Y ++L I LL
Sbjct: 226 QKPAESPDQKDLMDRMQRFFGAKVALKSSGRGGKLEISYADQKELARIVELLN 278
>gi|292669345|ref|ZP_06602771.1| stage 0 sporulation protein J [Selenomonas noxia ATCC 43541]
gi|292648980|gb|EFF66952.1| stage 0 sporulation protein J [Selenomonas noxia ATCC 43541]
Length = 338
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 98/297 (32%), Positives = 159/297 (53%), Gaps = 14/297 (4%)
Query: 15 AALIGEVNQSIDSPEKKTETIP-----ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQS 69
AL G+ + P + + +++I PN PR+ F+ LE+L +S
Sbjct: 21 NALTGKKEAPASGRAAASAGTPPAMQTGTPAELGVNAIRPNRFQPRHEFDEAALEELRES 80
Query: 70 IKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
I HGI+QPL VR I G Y++IAGERR RAAK+A L VPVI R + E+A++EN
Sbjct: 81 IAQHGILQPLSVRDIGGGKYELIAGERRLRAAKLAGLKTVPVIFRAATDAEMAEMALIEN 140
Query: 130 VQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
+QR+DLNP+EEA YE+L++E+ +Q + V +SRS VAN +R+L+L V+ I
Sbjct: 141 LQREDLNPIEEARAYERLLTEFKLSQEQLARRVARSRSAVANSVRLLRLAKEVQAFIANG 200
Query: 190 EISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+++G AR L++ A+ I ++S R E LV+ + KK + ++
Sbjct: 201 VLAMGQARPLLALQTAALQREAAEYIQEHELSARGAEALVKRLVKDPKALKKAAQTQKKT 260
Query: 247 ----EKYLTDLEKKISSKVGLNISIKHRN--NKGQFCIKYETNEQLKIICSLLGEND 297
+ ++ + E++++ +G + I+ KG+ I Y + E L+ + LL D
Sbjct: 261 RTPADIFVREAEERLTHSLGTKVRIQAGREQGKGRLEISYFSAEDLERLIELLSAVD 317
>gi|327539530|gb|EGF26142.1| chromosome partitioning protein parB [Rhodopirellula baltica WH47]
Length = 304
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 88/294 (29%), Positives = 154/294 (52%), Gaps = 14/294 (4%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQD--CISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
+AAL+GE I P + + + I S+ NP PR F + + L +SIK
Sbjct: 1 MAALLGEPMDDIVPPGETNDAPKPGVQSLELPIESVEANPFQPRREFNPDEIASLAESIK 60
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
+H +QP++VR +D Y++I+GERR RA A L + +R D++ E+AI+EN+Q
Sbjct: 61 NHQQLQPILVRIVDGR-YQLISGERRLRATIHAGLKTIRAEVREADDRLVAELAIIENLQ 119
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
RKDLN +E+A+ +++ I E+ Q+D+ + RS +AN++R+L+LP + EM+ E+
Sbjct: 120 RKDLNAIEKAMSFKRYIDEHKCKQDDLARRLSIDRSTIANLMRLLELPQPIVEMVTSGEL 179
Query: 192 SLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK-------IFE 241
+ GHAR + ++ A+ I+ + SVR TE V E +E +
Sbjct: 180 TAGHARALLPIGEVEVQVATAKKILEEGWSVRKTETGVAELLRAEEDSDTGLKVTNVSRQ 239
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ ++ +++++ G + IK ++G+ I + E+ + I LLG
Sbjct: 240 KRKPVPPHIEAMQQEMRMVFGTKVEIKASARSRGKITIHFSDAEEFERIRGLLG 293
>gi|254446060|ref|ZP_05059536.1| ParB-like nuclease domain family [Verrucomicrobiae bacterium
DG1235]
gi|198260368|gb|EDY84676.1| ParB-like nuclease domain family [Verrucomicrobiae bacterium
DG1235]
Length = 324
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 104/326 (31%), Positives = 174/326 (53%), Gaps = 32/326 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD-------------------- 40
M+ +K RLG+GLA LI + + K P +
Sbjct: 1 MAK--AKPRLGKGLAGLISGNTANKTASPAKKTVAPAATKKQAASGKASPAPALKEEVVG 58
Query: 41 -----CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+S+ + PNP+ PR FE L DL +SI+S G+IQP++VR +D Y++IAGE
Sbjct: 59 NASFLELSVSKVEPNPYQPRREFEESQLSDLAESIRSEGLIQPIVVREVDGR-YQLIAGE 117
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RA K+ +S++P I + SS +A++EN+QR++LNP+EEALGY L+ ++ Q
Sbjct: 118 RRWRAFKLLKISKIPARIIKAGDSSSASMALIENLQRENLNPIEEALGYASLLRDFDLKQ 177
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVI 212
+ VGK R+ +AN LR+L LP VR + +S GHA+ L+ + ++ +A+ I
Sbjct: 178 EQVAERVGKGRATIANSLRLLTLPDEVRGYLSTGLLSTGHAKVLLGLEAKAEQTLIARRI 237
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEG-SREKEKYLTDLEKKISSKVGLNISIKHRN 271
+ + +SVR TE L++ + ++ S + + D+EK++ S + +++ H
Sbjct: 238 IEEGVSVRGTEALIESMKRSGKGKQSSGRPVSSAEAAAIEDIEKRMVSYLNAKVALNHTP 297
Query: 272 NKGQFCIKYETNEQLKIICSLLGEND 297
KG+ I+Y N+ L+ I +G +
Sbjct: 298 KKGKILIEYTGNDDLQRILEKIGLEE 323
>gi|294055995|ref|YP_003549653.1| parB-like partition protein [Coraliomargarita akajimensis DSM
45221]
gi|293615328|gb|ADE55483.1| parB-like partition protein [Coraliomargarita akajimensis DSM
45221]
Length = 322
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 154/322 (47%), Gaps = 32/322 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE---------------------KKTETIPESQ 39
MSN K RLGRGL LI S
Sbjct: 1 MSN---KSRLGRGLGGLISGAGSSAPKKAPVKKAASKVNSKKTAADAAVANSVPAAVPGY 57
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
+ + +IV NP+ PR + +E+L +SI++ G++QP++VR Y++IAGERR
Sbjct: 58 AELEVKAIVANPYQPRREINPQHVEELAKSIQAEGLLQPVVVRQKGAK-YELIAGERRLH 116
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
A K +P I + SS +A++EN+QR++LNP++EALGY LI ++ TQ
Sbjct: 117 AFKFLKQKAIPARIIEASDASSAALALIENLQRENLNPIDEALGYASLIRDFDLTQEAAA 176
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKK 216
VGK R+ VAN +R+L L + ++ + + IS GHA+ L+ A+ ++
Sbjct: 177 ERVGKGRATVANAMRLLTLNTEIQGYLSRRLISTGHAKVLLGLESDEHRRLLARRVIETG 236
Query: 217 MSVRDTEELVQEQDNKKEKRKK--IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-- 272
MSVR+ E+ V+ N + + + DLEK+IS +S+KH
Sbjct: 237 MSVREAEQEVKRLKNSGAASASVGTRQAPDAEGTAIRDLEKRISEHFNSRVSMKHSPKTQ 296
Query: 273 KGQFCIKYETNEQLKIICSLLG 294
KG+ I+Y NE L+ I LG
Sbjct: 297 KGKITIEYVGNEDLERILEKLG 318
>gi|116514830|ref|YP_813736.1| Spo0J-like protein [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116094145|gb|ABJ59298.1| chromosome segregation DNA-binding protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325126524|gb|ADY85854.1| Chromosome partitioning parB protein [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
Length = 296
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 97/273 (35%), Positives = 156/273 (57%), Gaps = 9/273 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
E+ E + + + + PNP+ PR F+ + L +L +SIK +G++QP+IV G
Sbjct: 26 EEEPQVKPAEEIEDLPLAEVRPNPYQPRKNFDEKKLAELAESIKENGVLQPIIV-RRSVG 84
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y+IIAGERR RA+++A + +P IIR D +E+AI+EN+QR+DL PLEEA YE L
Sbjct: 85 GYEIIAGERRCRASELAGQATIPAIIRQFDESQMMEVAILENLQREDLTPLEEAQAYEML 144
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSD 204
G TQ ++ +GKSR ++ N LR+L LP + ++++ E+S+G ART L
Sbjct: 145 QKNLGLTQEEVSKKMGKSRPYITNYLRLLTLPQKTKGLLQRGELSMGQARTLLGLKDKDR 204
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
LA+ +V + M VR E LV + + R + + + K ++ E ++++K G
Sbjct: 205 IDELAKRVVKEGMPVRKVEALVAKMNE----RGQKKKKNAGKSAFVRASESQLAAKFGSP 260
Query: 265 ISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+SI ++ KG I + + ++L I LLG N
Sbjct: 261 VSITENKTGKGHLSIDFASPDELNRILDLLGVN 293
>gi|167754414|ref|ZP_02426541.1| hypothetical protein ALIPUT_02708 [Alistipes putredinis DSM 17216]
gi|167659039|gb|EDS03169.1| hypothetical protein ALIPUT_02708 [Alistipes putredinis DSM 17216]
Length = 298
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 104/291 (35%), Positives = 157/291 (53%), Gaps = 10/291 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++ LGRGL A+ G + IS+ +I PNP PR F+ E LE
Sbjct: 1 MKQKGLGRGLDAIFGSEHLDAR------LKPMTEMAEISVSAIFPNPTQPRTEFDEEALE 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI++ G+IQP+ V+ D+G Y II+GERR+RAA+ A L +P IR VD+++ +
Sbjct: 55 ELADSIRTLGVIQPITVKRTDDGRYLIISGERRWRAARKAGLESLPAYIREVDDENLHAM 114
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLN +E ALG ++LI E TQ + VGK RS V+N +R+LKLP+ V+
Sbjct: 115 ALVENIQREDLNAIEIALGMQRLIDECNLTQEALSEKVGKKRSTVSNYMRLLKLPNEVQL 174
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+++ IS+GHA+ + L L + + K +SVR EELV+ + K E
Sbjct: 175 ALKEGLISMGHAKAIAGAPEELQLRLLKKCIRKGLSVRQIEELVRALTDPAAKPAAPAED 234
Query: 243 SREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
E Y L +++ ISIK +N G+ I + + +
Sbjct: 235 EEYPESY-ARLVEQLEKFFSQEISIKRSKNGGGRIVIDFSDDRDIDRFIEK 284
>gi|262172749|ref|ZP_06040427.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio mimicus MB-451]
gi|261893825|gb|EEY39811.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio mimicus MB-451]
Length = 293
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 90/296 (30%), Positives = 163/296 (55%), Gaps = 8/296 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + ++ + +SI ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSTEGELADLSISNLKPGIYQPRKDLSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAAK A L +VP +I+ V++++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRHLSTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNAMEEAQALERLQNEFSLTHQQVAEVIGKSRTTVTNLLRLNQLSD 180
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V+ ++ +++ +GHAR L+ + K + EQ KK
Sbjct: 181 DVKRLLETKQLEMGHARALLMLEGEQQVEVAQQVVK---KQMTVRQTEQLVKKCLTDPSD 237
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ + + + +S K+ +SI + N K + I + +L+++ + L
Sbjct: 238 TKNVSEDLEIQQMSQNLSEKLAAKVSIVRSPNGKSKVTISLDEPHKLELLIAKLQN 293
>gi|295837765|ref|ZP_06824698.1| ParB family protein [Streptomyces sp. SPB74]
gi|295826663|gb|EDY45854.2| ParB family protein [Streptomyces sp. SPB74]
Length = 364
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 90/301 (29%), Positives = 155/301 (51%), Gaps = 15/301 (4%)
Query: 12 RGLAA--LIGEVNQSIDSPEKKTETIPESQ--------DCISIHSIVPNPHNPRNYFESE 61
RG+AA L V + ++E + + I+PN PR F+ +
Sbjct: 42 RGVAAAKLTAPVENDVSRETSESEQRGGLPPAPEGAFFAELPLDQIIPNRDQPRAIFDED 101
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L +L SIK G++QP++VR +D +++I GERR RA+K A L+ +P I+R ++
Sbjct: 102 ALRELIDSIKEVGLLQPVVVRQLDEKQFELIMGERRMRASKEAGLTTIPAIVRATEDDRL 161
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
L A++EN+ R L PLEEA YEQL+ ++ T ++ VG+SR V N LR+LKL S
Sbjct: 162 LLDALLENLHRSQLTPLEEAHAYEQLLKDFNCTHEELAKRVGRSRPQVTNTLRLLKLSPS 221
Query: 182 VREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++ + +S GHAR L+ +++ LA+ I+ + +SVR EE+ + K
Sbjct: 222 VQKKVDAGVLSAGHARELLSVEDSTEQDKLAERIIREGLSVRAVEEITHLMRSHPGPAKS 281
Query: 239 IFEGS--REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ L++L ++S + + + KG+ +++ + + L+ I S L +
Sbjct: 282 ASKPRAGSVTSPALSELAGRLSDRFETRVKVDLGQKKGKIVVEFASVDDLQRILSTLAPD 341
Query: 297 D 297
+
Sbjct: 342 E 342
>gi|72163509|ref|YP_291166.1| chromosome segregation DNA-binding protein [Thermobifida fusca YX]
gi|71917241|gb|AAZ57143.1| chromosome segregation DNA-binding protein [Thermobifida fusca YX]
Length = 295
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 86/264 (32%), Positives = 146/264 (55%), Gaps = 10/264 (3%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA----- 93
+ I + +++PNP PR YF+ E LE+L SI G++QP++VR +D A
Sbjct: 25 LEEIPVDAVMPNPRQPRQYFDEEALEELTASIAEVGLLQPIVVRKLDGSQSDSTAKYQLI 84
Query: 94 -GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
GERR+RA++ A L ++P I+R + L A++EN+ R++LNPLEEA Y+QL+ ++G
Sbjct: 85 MGERRWRASQRAGLEKIPAIVRETSDDDMLRDALLENLHRQELNPLEEAAAYQQLLDDFG 144
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLA 209
T ++ +G+SR H++N LR+L L +V+ + IS GHAR L+ LA
Sbjct: 145 VTHEELAKRLGRSRPHISNTLRLLNLSPAVQRKVAARVISAGHARALLAVEDPELQDHLA 204
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH 269
I+++ +SVR EE++ K K+ R+ L ++ ++S + +
Sbjct: 205 HRIITEGLSVRALEEIIA-LGEIKAPTKQRRATVRQPSPELEEVANRLSDVFDTRVKVNM 263
Query: 270 RNNKGQFCIKYETNEQLKIICSLL 293
NKG+ +++ T E L+ I + +
Sbjct: 264 GRNKGKIVVEFATKEDLERILATM 287
>gi|296111118|ref|YP_003621499.1| chromosome partitioning protein ParB [Leuconostoc kimchii IMSNU
11154]
gi|295832649|gb|ADG40530.1| chromosome partitioning protein ParB [Leuconostoc kimchii IMSNU
11154]
Length = 299
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 102/278 (36%), Positives = 160/278 (57%), Gaps = 10/278 (3%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E K T E I++ + NP PR+ F E LE+L +SIK +G++ P+
Sbjct: 23 EEALEHTKAVTKQATATEQVVRINLVDVEANPFQPRHRFNDERLEELSRSIKQNGVLTPI 82
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
IVR D G Y+IIAGERR RA+K+A L+ + I+R VD+ + IA++EN+QR DL+ +E
Sbjct: 83 IVRKHDRG-YQIIAGERRVRASKLAELTYISAIVREVDDDTMAAIALIENLQRDDLDVIE 141
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART- 198
EA Y+ L+ + TQ + VGK R+ VAN LR+LKLP SV+E++ K ++S+GHAR
Sbjct: 142 EAQAYDNLMQQLHLTQAQVAEKVGKERTTVANALRLLKLPQSVQELVEKGDLSMGHARAL 201
Query: 199 --LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
L S + +AQ+I+++ ++VR E LV++ +N + + Y+T L +
Sbjct: 202 LGLKSKAKLEEVAQLIITRHLNVRQVESLVRQINN-----GTTEKNEKVVSPYITSLATQ 256
Query: 257 ISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ K G +++ G+ I Y +N+ L I +LL
Sbjct: 257 LEEKFGTKVNVNVGNKGHGKIEISYLSNDDLSRILNLL 294
>gi|226357388|ref|YP_002787128.1| chromosome partitioning protein [Deinococcus deserti VCD115]
gi|226319378|gb|ACO47374.1| putative chromosome partitioning protein parB [Deinococcus deserti
VCD115]
Length = 281
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 18/294 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K LGRGL AL+G + +SI I + PR F
Sbjct: 1 MS---KKSSLGRGLDALLG-------AKAAPEAAGGPQVQTLSISRITQAAYQPRQVFAP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L QSI+ G++QPL+VR + ++I+AGERR+RA+++A L+E+PVIIR++ ++
Sbjct: 51 EALAELAQSIRDKGVLQPLLVRPRGDN-FEIVAGERRWRASQLAGLTEIPVIIRDLADRE 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAIVEN+QR+DL PLEEA Y+ L+++ Q + VGK RS VAN LR+L L S
Sbjct: 110 ALEIAIVENLQREDLGPLEEARAYQALMNQGL-NQEGVAQAVGKGRSTVANALRLLSLDS 168
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ + + +IS GHAR +++ + + + V+E + K + +
Sbjct: 169 AALNALDRGQISAGHARAILAQPEKDRAWALDQIVTHGLN-----VREAEALKRETRAPG 223
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ +E +S + G + I +KG+ + Y + E+L I SLLG
Sbjct: 224 PIKVNPPRTYRQVELDLSRRTGTRVRIT-GEDKGRVELNYGSREELDRILSLLG 276
>gi|311897299|dbj|BAJ29707.1| putative partitioning/sporulation protein [Kitasatospora setae
KM-6054]
Length = 356
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 98/352 (27%), Positives = 162/352 (46%), Gaps = 57/352 (16%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQ------------------------SIDSPEKKTETIP 36
MS ++R LGRGL ALI D +
Sbjct: 1 MS--GTRRGLGRGLGALIPATQPVAAELAAPAAEPAGAGQVAVAPVVPTDRGTVAAKAAA 58
Query: 37 ESQDCI------------------------SIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
ES + + SI PNP PR F+ E L +L SIK
Sbjct: 59 ESLRELAGDQRRSVLEAALAPVDGARFAELPLESIRPNPRQPREVFDEEKLAELVASIKE 118
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G++QP++VR Y++I GERR+RA++ A L +P I+R D+ L A++EN+ R
Sbjct: 119 VGLLQPVVVRQTGPDRYELIMGERRWRASREAGLDVIPAIVRATDDDKLLLDALLENLHR 178
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
+LN LEEA Y+QL+ ++ T + + VGKSR HV+N LR++KLP SV+ + +++
Sbjct: 179 AELNALEEAAAYDQLLRDFDCTHLQLATRVGKSREHVSNTLRLMKLPVSVQLKVAAGQVT 238
Query: 193 LGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
GHA+ + + LA ++++ +SVR TEE+ + K+ K+K+
Sbjct: 239 AGHAKAILMAPDAQQEKLANRVLAEGLSVRTTEEIAKLLSGKEPKKKRAPRAEPLPTPAF 298
Query: 251 TDLEKKISSKVGLNISIKHRN-----NKGQFCIKYETNEQLKIICSLLGEND 297
+L ++S + + ++ +G+ +++ + E L I L +
Sbjct: 299 DELAGRLSDRFETRVKVEVAQSGGRFGRGKVVLEFGSVEDLNRILDSLAPGE 350
>gi|104774702|ref|YP_619682.1| chromosome partitioning protein ParB [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|103423783|emb|CAI98791.1| Chromosome partitioning protein ParB [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
Length = 296
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 97/273 (35%), Positives = 156/273 (57%), Gaps = 9/273 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
E+ E + + + + PNP+ PR F+ + L +L +SIK +G++QP+IV G
Sbjct: 26 EEEPQVKPAEEIEDLPLAEVRPNPYQPRKNFDEKKLAELAESIKENGVLQPIIV-RRSVG 84
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y+IIAGERR RA+++A + +P IIR D +E+AI+EN+QR+DL PLEEA YE L
Sbjct: 85 GYEIIAGERRCRASELAGQATIPAIIRQFDESQMMEVAILENLQREDLTPLEEAQAYEML 144
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSD 204
G TQ ++ +GKSR ++ N LR+L LP + ++++ E+S+G ART L
Sbjct: 145 QKNLGLTQEEVSKKMGKSRPYITNYLRLLTLPQKTKGLLQRGELSMGQARTLLGLKDKDR 204
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
LA+ +V + M VR E LV + + R + + + K ++ E ++++K G
Sbjct: 205 IDELAKRVVKEGMPVRKVEALVAKMNE----RGQKKKNNAGKSAFVRASESQLAAKFGSP 260
Query: 265 ISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+SI ++ KG I + + ++L I LLG N
Sbjct: 261 VSITENKTGKGHLSIDFASPDELNRILDLLGVN 293
>gi|229136304|ref|ZP_04265051.1| Stage 0 sporulation protein J [Bacillus cereus BDRD-ST196]
gi|229170182|ref|ZP_04297868.1| Stage 0 sporulation protein J [Bacillus cereus AH621]
gi|228613283|gb|EEK70422.1| Stage 0 sporulation protein J [Bacillus cereus AH621]
gi|228647176|gb|EEL03264.1| Stage 0 sporulation protein J [Bacillus cereus BDRD-ST196]
Length = 273
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 97/268 (36%), Positives = 158/268 (58%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR YF E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEIIVTELRPNPYQPRKYFNKEAIQELAASIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H R T+ SL +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + ++ + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEQIVQEINQ--RVSRETQQVKKERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLSKGN 273
>gi|148982408|ref|ZP_01816746.1| ParB family protein [Vibrionales bacterium SWAT-3]
gi|145960490|gb|EDK25860.1| ParB family protein [Vibrionales bacterium SWAT-3]
Length = 293
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 93/296 (31%), Positives = 173/296 (58%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + +++ S+ P + PR
Sbjct: 1 MSKRGLGKGLDALLATSSLAREKQQVASHSQALSADGELTELAVGSLKPGVYQPRKDIAP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + Y+IIAGERR+RAA+ A L +VP +I+ V++K+
Sbjct: 61 EALEELAASIQSQGIIQPIVVRPLAQDQYEIIAGERRWRAARQAGLKQVPCLIKRVEDKA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V+N+LR+ +L +
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQNEFELTHQQVADVIGKSRATVSNLLRLNQLEN 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR L + + A +K M+VR TE+LV++
Sbjct: 181 EVKGLVSNKQLEMGHARALLALEGDTQVEAANTAATKNMTVRQTEQLVKKCLKPD----- 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ S+ ++ +L ++++ K+ N+S+ + K + I + +L+ + + L
Sbjct: 236 VEPESKPEDTEAIELSRRLTEKLQANVSVTRSVSGKSKVTITLDEPHKLEQLIAKL 291
>gi|197120317|ref|YP_002140744.1| ParB-like nuclease domain-containing protein transcriptional
regulator [Geobacter bemidjiensis Bem]
gi|197089677|gb|ACH40948.1| ParB-like nuclease domain protein, putative transcriptional
regulator [Geobacter bemidjiensis Bem]
Length = 279
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 103/293 (35%), Positives = 157/293 (53%), Gaps = 19/293 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LG+G+ AL+ E + I I PN PR F +E LE
Sbjct: 2 VKKMGLGKGMGALLP-----------VVEDHGKKYFSCPIEEIRPNKEQPRKTFVNEKLE 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ GIIQPL+V G Y++IAGERR+RAA+ A L EVPV+I++V +++LE+
Sbjct: 51 ELAASIREKGIIQPLVV-LKKAGHYELIAGERRWRAAQKAGLREVPVVIQDVSEETALEM 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +EEA Y L+ + +Q ++ VGK RS +AN LR+L+LP+ ++
Sbjct: 110 ALIENIQREDLNAVEEAEAYHALLERFSLSQEELAKRVGKERSTIANALRLLRLPAEIKR 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ ++ IS+GHAR L++ DP IV +SVR+TE LV+ +
Sbjct: 170 DVAEDRISMGHARALLTLEDPEEQKAARDEIVKNHLSVRETEALVKRKKA----GPAKKP 225
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ DL ++ G +++K G+ I Y ++L I LL
Sbjct: 226 QKPVESPDQKDLMDRMQRFFGAKVALKSSGRGGKLEISYADQKELARIVELLN 278
>gi|125974863|ref|YP_001038773.1| chromosome segregation DNA-binding protein [Clostridium
thermocellum ATCC 27405]
gi|256003881|ref|ZP_05428868.1| parB-like partition protein [Clostridium thermocellum DSM 2360]
gi|281418671|ref|ZP_06249690.1| parB-like partition protein [Clostridium thermocellum JW20]
gi|125715088|gb|ABN53580.1| chromosome segregation DNA-binding protein [Clostridium
thermocellum ATCC 27405]
gi|255992219|gb|EEU02314.1| parB-like partition protein [Clostridium thermocellum DSM 2360]
gi|281407755|gb|EFB38014.1| parB-like partition protein [Clostridium thermocellum JW20]
gi|316939074|gb|ADU73108.1| parB-like partition protein [Clostridium thermocellum DSM 1313]
Length = 289
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 103/283 (36%), Positives = 172/283 (60%), Gaps = 14/283 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K+ LG+GL ALI + E + + I+ I PN + PR YF++E LE
Sbjct: 1 MNKKGLGKGLGALISSAGE---------EKVDSGVIEVKINDIEPNTNQPRKYFDTEKLE 51
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L +SI+ HG++QP+IVR +NG Y+I+AGERR+RAA++A L+ +PVI +++ NK +EI
Sbjct: 52 QLAESIRKHGVVQPIIVRR-ENGTYRIVAGERRWRAARLAGLTTIPVIEKDLSNKQIMEI 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEA Y +L++E+ TQ ++ + +GKSRS +AN +R+L LP V+E
Sbjct: 111 ALIENIQREDLNPIEEAEAYHRLLNEFNMTQEELSNSIGKSRSAIANTIRLLGLPDKVKE 170
Query: 185 MIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ + I+ GHAR L+ + L I+ K ++VR E LV+++ + +
Sbjct: 171 KLIEGRITSGHARALLAIDNRELQEKLCDEIIDKNLTVRQVELLVKKKLAELSGSENKRN 230
Query: 242 GSREKEKY-LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETN 283
+ + K +E+ + + G + + + N KG+ I+Y +
Sbjct: 231 KNEKINKEEYLKIEENLQNIFGTKVKLINNNKKGKIMIEYYSE 273
>gi|255326489|ref|ZP_05367571.1| stage 0 sporulation protein J [Rothia mucilaginosa ATCC 25296]
gi|255296529|gb|EET75864.1| stage 0 sporulation protein J [Rothia mucilaginosa ATCC 25296]
Length = 432
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 84/284 (29%), Positives = 149/284 (52%), Gaps = 6/284 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + +++H I PN PR F+ + +E+L S++ G++QP
Sbjct: 146 STPQSASEEQSGLVPVPGAQFAELNVHDIHPNRKQPRTDFDEQDMEELIHSVREIGVLQP 205
Query: 79 LIVRAI---DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
++VR Y+++ GERR+RA + A L+ +P I+R ++ L A++EN+ R L
Sbjct: 206 IVVRPSRESGAEKYELVMGERRWRATQAAGLTTIPAIVRETEDGDLLRDALLENLHRSQL 265
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
NP+EEA Y+QL+ E+ TQ + +G+SR ++N +R+LKLP+ V+ + +S GH
Sbjct: 266 NPIEEAAAYQQLMEEFDTTQEQLAKRIGRSRPQISNTIRLLKLPALVQRRVAAGILSAGH 325
Query: 196 ARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
AR L + +LAQ IV++ +SVR TEELV E +++ ++ + L
Sbjct: 326 ARALLALTDQAQIETLAQKIVNEGLSVRATEELVNHASGAAEVKERKAPQPQKHRERLDY 385
Query: 253 LEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ + + K+ ++ I KG+ I++ E L I +L +
Sbjct: 386 IAEAFADKLDTSVKISLGARKGKMTIEFANVEDLNRIIRVLDSD 429
Score = 43.5 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCIS 43
M+ +R LGRGL ALI + ++ + E K +
Sbjct: 1 MAE--KRRGLGRGLGALIPQSTKNSGNAEAKASEKTTAVKTAP 41
>gi|146337359|ref|YP_001202407.1| chromosome partitioning protein [Bradyrhizobium sp. ORS278]
gi|146190165|emb|CAL74157.1| chromosome partitioning protein [Bradyrhizobium sp. ORS278]
Length = 279
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 116/278 (41%), Positives = 167/278 (60%), Gaps = 7/278 (2%)
Query: 26 DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID 85
+ P +Q + I + PNP NPR F L +L SIK HG+IQP++VR I
Sbjct: 2 NREAGAPPERPRNQRKVPIEFLKPNPRNPRKTFSDGELAELSASIKQHGVIQPIVVRPIK 61
Query: 86 --NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
Y+IIAGERR+RA++ A L EVP++ +V + +LE+AI+ENVQR+DLNP+EEA G
Sbjct: 62 GQQDRYEIIAGERRWRASQAAGLHEVPIVPVDVSDSDALELAIIENVQREDLNPMEEAQG 121
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS 203
Y L +E+ Q +I IVGKSRSHVAN++R+ KLP+ V+ I EIS GHAR L++
Sbjct: 122 YHALANEFKRNQEEIAKIVGKSRSHVANMMRLTKLPAEVQGFIATGEISAGHARALINLP 181
Query: 204 DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG-----SREKEKYLTDLEKKIS 258
DPL+ A+ I+++ ++VR TE L E+ + K +K +K+ LEK++
Sbjct: 182 DPLTAAKKIIAEGLNVRQTEALAHEEGVPERKPQKPRSAGGSAAPEKKDADTLALEKRVG 241
Query: 259 SKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+GL +SI HR+ G I Y + EQL + L +
Sbjct: 242 DALGLTLSISHRDPGGTVQITYRSLEQLDEVMRRLEQG 279
>gi|319940685|ref|ZP_08015027.1| chromosome segregation DNA-binding protein [Sutterella
wadsworthensis 3_1_45B]
gi|319805836|gb|EFW02603.1| chromosome segregation DNA-binding protein [Sutterella
wadsworthensis 3_1_45B]
Length = 288
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 168/296 (56%), Gaps = 11/296 (3%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
K LGRGL G+ D P + + I + + PR +
Sbjct: 1 MPKKKGGLGRGLDVFFGDD----DHPGILEDDKSAKFIEVPITEVRAGRYQPRTQMDEAA 56
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L DL SI+ G++ P++VR ++ G Y+++AGERR RAAK+A + VPVI+R+V ++++L
Sbjct: 57 LADLAASIREQGVLSPILVRPLEAGGYEVLAGERRLRAAKIAGMETVPVILRSVSDENAL 116
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
I ++EN+QR++LNP+EEA G ++LI E+ +T VG+SR +N+LR+L L V
Sbjct: 117 VIGLIENIQRENLNPIEEAQGLQRLIDEFAFTHEAAAKAVGRSRPAASNLLRLLTLSDEV 176
Query: 183 REMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ M+ + E+ +GHAR L + ++ + A+ + +K +SVR TE+LV+ + +KK+
Sbjct: 177 KRMVMEGELEMGHARALLGLEGAEQAAAAKQVAAKHLSVRQTEDLVRRLLEGVQPKKKVV 236
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+R+ E LE+ ++ +G + + ++ KG+ I++ + +QL+ I +
Sbjct: 237 IKTRDNE----RLEEALADTLGAVVKLSANQKGKGRIVIEFSSLDQLQGIVDRIQN 288
>gi|319760792|ref|YP_004124729.1| parb-like partition protein [Alicycliphilus denitrificans BC]
gi|330822712|ref|YP_004386015.1| parB-like partition protein [Alicycliphilus denitrificans K601]
gi|317115353|gb|ADU97841.1| parB-like partition protein [Alicycliphilus denitrificans BC]
gi|329308084|gb|AEB82499.1| parB-like partition protein [Alicycliphilus denitrificans K601]
Length = 305
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 172/304 (56%), Gaps = 19/304 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+G + D E+ +++ +VP + PR + L
Sbjct: 4 KKPKGLGRGLEALLG--PKVADKAEQAQAEAQGLPSTLALDQLVPGVYQPRTRMDEGALY 61
Query: 65 DLCQSIKSHGIIQPLIVRAIDNG----LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+L +SI++ G++QP++VR + NG Y+IIAGERRFRA+++A L+EVPV++R+V +++
Sbjct: 62 ELAESIRAQGVMQPILVRRLGNGENVGKYEIIAGERRFRASRLAGLNEVPVLVRDVPDEA 121
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++LI E+G T VG+SRS +N+LR+L L
Sbjct: 122 AAAMALIENIQREDLNPLEEAQGLQRLIREFGLTHEQAAQAVGRSRSAASNLLRLLNLAE 181
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ +I +GHAR L++ + I ++K+SVR+ E LV++ +
Sbjct: 182 PVQTMLMAGDIDMGHARALLALDRATQITAGNQIAARKLSVREAEGLVKKLGAEF--NLT 239
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN---------KGQFCIKYETNEQLKII 289
+ ++K + + +E+++S + + ++ + G+ I + + E L +
Sbjct: 240 PQKPKKDKSRDMKRIEEELSDLLMAEVEVRVKKRVKRGSRTEEMGELAIAFGSLEALNGL 299
Query: 290 CSLL 293
L
Sbjct: 300 IERL 303
>gi|68171522|ref|ZP_00544902.1| ParB-like partition protein [Ehrlichia chaffeensis str. Sapulpa]
gi|88657847|ref|YP_506836.1| ParB family chromosome partitioning protein [Ehrlichia chaffeensis
str. Arkansas]
gi|67999050|gb|EAM85721.1| ParB-like partition protein [Ehrlichia chaffeensis str. Sapulpa]
gi|88599304|gb|ABD44773.1| chromosome partitioning protein, ParB family [Ehrlichia chaffeensis
str. Arkansas]
Length = 281
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 112/289 (38%), Positives = 174/289 (60%), Gaps = 15/289 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLG+G+ LIG + E ++ + I+ + P+ PR F E L++L
Sbjct: 3 KRLGKGIFELIGN-----STLEINNNISTDTHLTMPINLLNPSTSQPRKTFNQECLKELA 57
Query: 68 QSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
+SI HGIIQP+I+R + Y+IIAGERR+RA+ +A L VPVI++ + + LE++I
Sbjct: 58 ESISKHGIIQPIIIRKNPHKKGYEIIAGERRWRASILAKLKSVPVIVKEISDSQCLELSI 117
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DL P+EEA Y LI+ + YT D+ SI+GKSRSH+ N++RIL LP+S++ MI
Sbjct: 118 IENIQRQDLTPIEEAEAYSNLINTFSYTHEDLASIIGKSRSHITNMIRILSLPTSIKSMI 177
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ IS GHAR L++ +P ++A+ I+S ++VR TE L++ ++
Sbjct: 178 NDKLISFGHARALINIENPEAIAEKIISLNLNVRQTELLIKNLQKPH---------KKKS 228
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
++ LT+LE+ +S + L I I NKG IKY +QL I L +
Sbjct: 229 KENLTELEQSLSEILNLQIKINGLKNKGSIVIKYNNTQQLNSILEKLKK 277
>gi|291297415|ref|YP_003508813.1| parB-like partition protein [Meiothermus ruber DSM 1279]
gi|290472374|gb|ADD29793.1| parB-like partition protein [Meiothermus ruber DSM 1279]
Length = 272
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 97/294 (32%), Positives = 162/294 (55%), Gaps = 25/294 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS S LG+GL AL+ P SQ + + I PNP PR F+
Sbjct: 1 MSKKPS--GLGKGLEALLP--------------KTPASQTKLPLALIKPNPAQPRRLFDQ 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+ G++QPL+VR +Y+++AGERR++A++MA L EVPV+I+++ +
Sbjct: 45 EALEELAASIREKGLLQPLLVRPKG-DMYELVAGERRYKASQMAGLREVPVVIKDIGERE 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIA++EN+QR+DLNP+EEA GY++L + G TQ ++ VGK+R V N LR+L+L
Sbjct: 104 ALEIALIENLQREDLNPMEEAEGYKRL-VDMGMTQEEVAKAVGKARVTVTNALRLLQLSP 162
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+++ + + +IS GHAR L+ + + +++L + + + +
Sbjct: 163 EIKQALEENKISAGHARALLMLPESKRNWGLSEVL------SKQLSVRETERLKDKPAAS 216
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ E+ ++ + +S ++G + KG+ I Y + E+L I LG
Sbjct: 217 SSRHKGEEAYAEIARNLSRRLGTKVRFT-SLRKGKIEISYHSEEELTAILQALG 269
>gi|283852490|ref|ZP_06369758.1| parB-like partition protein [Desulfovibrio sp. FW1012B]
gi|283572098|gb|EFC20090.1| parB-like partition protein [Desulfovibrio sp. FW1012B]
Length = 314
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 97/311 (31%), Positives = 163/311 (52%), Gaps = 28/311 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +++ LGRGL AL+G E + + +I PNP PR FE
Sbjct: 1 MA--QAQKGLGRGLEALLGGYQDERSGQE---------VLTLPLDAIRPNPEQPRRTFEP 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAI---DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
L +L SIK G++QP++VR + ++I+AGERR+RAA++A L+E+PV++R VD
Sbjct: 50 GALAELAASIKGQGLLQPVLVRPVADAGGATHEIVAGERRWRAARLAGLTEIPVLVREVD 109
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ SL +A++EN+QR+DLNP+EEA L++ +G +Q+ + VGKSR VAN LR+L+
Sbjct: 110 DEQSLALALIENLQREDLNPVEEAAALNLLLTRFGMSQDALAKKVGKSRPAVANALRLLQ 169
Query: 178 LPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD---- 230
L + + + ++ GHAR +L +L Q IV+ MSVR+ EE +
Sbjct: 170 LSEPMLADLASQAMTAGHARALLSLADEELRQALWQRIVATGMSVREAEEAAGQAKATGR 229
Query: 231 -------NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETN 283
+ + K+ L ++E ++ + G+ + + G+ Y +
Sbjct: 230 LPDAAPARPEATGPRPARTRPAKDPCLREIEGPLTRQAGVMVKTTGSADHGRITFHYSSR 289
Query: 284 EQLKIICSLLG 294
+L+ + G
Sbjct: 290 RELEGLLEHFG 300
>gi|88854492|ref|ZP_01129159.1| chromosome partitioning protein [marine actinobacterium PHSC20C1]
gi|88816300|gb|EAR26155.1| chromosome partitioning protein [marine actinobacterium PHSC20C1]
Length = 316
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 18/315 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSP------------EKKTETIPESQDCISIHSIV 48
M+ + LGRG+ ALI + + P ++ +S IV
Sbjct: 1 MA-APKRTGLGRGIGALIPASDDNEQRPVDVFFPGGEISTDRLRAVPGARLASLSPLDIV 59
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA-----IDNGLYKIIAGERRFRAAKM 103
PN PR F E L +L SI+ G++QP++VR Y++I GERR RA+K
Sbjct: 60 PNARQPRTEFRQEELAELVISIREIGVLQPIVVRPLAGAVEGEPQYELIMGERRLRASKQ 119
Query: 104 ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVG 163
L+ +P +I++ ++ L A++EN+ R +LNPLEEA Y+QL++++G TQ + +G
Sbjct: 120 LGLATIPAVIKSTADEDMLRDALLENLHRANLNPLEEASAYQQLLADFGITQEQLAERIG 179
Query: 164 KSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTE 223
+SR + N LR+L+LP S++ + ++ GHAR L+S D + ++
Sbjct: 180 RSRPQITNTLRLLRLPESIQRRVAAGVLTAGHARALLSLPDDQGMERLAEKIVNEELSVR 239
Query: 224 ELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETN 283
+ K + +K+ +L ++ ++++ ++ + + KGQ I + T
Sbjct: 240 AAEAAAGSLSTKPARSKPSRGKKQGHLDEIAERLADRLNTRVKVTLGATKGQVVIDFATV 299
Query: 284 EQLKIICSLLGENDF 298
L I LG+ F
Sbjct: 300 GDLNRILEELGDTGF 314
>gi|308179183|ref|YP_003918589.1| chromosome-partitioning protein ParB [Arthrobacter arilaitensis
Re117]
gi|307746646|emb|CBT77618.1| putative chromosome-partitioning protein ParB [Arthrobacter
arilaitensis Re117]
Length = 315
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 90/281 (32%), Positives = 155/281 (55%), Gaps = 7/281 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + + + E + + I PN PR+ F+ E +++L SI+ G++QP
Sbjct: 30 ADSQEVAATSPELVEVPGAQFAELDVTLIHPNRKQPRSNFDQEHMDELIHSIREIGLLQP 89
Query: 79 LIVRA---IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
++VR D+ Y+++ GERR+RA + A LS +P IIR+ + L A++EN+ R L
Sbjct: 90 IVVRPSREKDDVPYELVMGERRWRATQAAGLSTIPAIIRDTQDTDLLRDALLENLHRSQL 149
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
NPLEEA Y+QL+ E+ TQ + +G+SRS ++N +R++KLP V+ + +S GH
Sbjct: 150 NPLEEAAAYQQLLEEFECTQEVLSDRIGRSRSQISNTIRLMKLPPLVQRRVAAGVLSAGH 209
Query: 196 ARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
AR L + LAQ I+++ +SVR TEE V D+K K K + ++ + L
Sbjct: 210 ARALLGLSNNEAIEQLAQRIINEGLSVRATEEAVALSDDKPRKPAKKARET-QRNERLDF 268
Query: 253 LEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
L +S ++ N+ I+ + KG+ I++ + + L I ++
Sbjct: 269 LATSLSDRLDTNVKIQLGSRKGKVSIEFASVDDLNRIMHVI 309
>gi|309379551|emb|CBX21917.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 286
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A LSE+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLSEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQAALQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N IK N KG+ + ++T E + LG
Sbjct: 225 RPEPKKPATADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFGHLLEQLG 281
>gi|228905423|ref|ZP_04069378.1| Stage 0 sporulation protein J [Bacillus thuringiensis IBL 4222]
gi|228854243|gb|EEM98946.1| Stage 0 sporulation protein J [Bacillus thuringiensis IBL 4222]
Length = 273
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 98/266 (36%), Positives = 156/266 (58%), Gaps = 7/266 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEILVTELRPNPYQPRKHFNKEAIQELAISIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRAAK A L +VP ++R + + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRFRAAKEAGLEKVPAVVRPLTEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H R T+ SL +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQHVSRETK--KVKKERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGE 295
+ KG+ I++ E L I LL +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLSQ 271
>gi|258517425|ref|YP_003193647.1| parB-like partition protein [Desulfotomaculum acetoxidans DSM 771]
gi|257781130|gb|ACV65024.1| parB-like partition protein [Desulfotomaculum acetoxidans DSM 771]
Length = 305
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 171/306 (55%), Gaps = 14/306 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP----------ESQDCISIHSIVPN 50
MS KR LG+GL ALIG N +S ++ E I I+I ++PN
Sbjct: 1 MS---KKRGLGKGLGALIGITNDDSESVLEQDERIEIDDEIKKNKQAVYQDIAIEKLIPN 57
Query: 51 PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
PR F E LE+L QSIK HGI+QP++VR D G+Y+IIAGERR+RA K+ L+++P
Sbjct: 58 SSQPRIDFNIERLEELVQSIKEHGIVQPIVVRLTDQGVYEIIAGERRWRACKILGLNKIP 117
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
II+N + ++++EN+QR+DLN +EEA Y++L+ + TQ DI ++ KSRSH+A
Sbjct: 118 AIIKNYNEIDMTVVSLIENIQREDLNSIEEANAYKKLMETFSLTQEDISLLISKSRSHIA 177
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
NILR+L LP ++ ++ I+ GHA+ L++ D + V+ + E+ +
Sbjct: 178 NILRLLSLPEEIKLLVTNRSITTGHAKALLALPDEETQKLVVEKIIANNLSVREVEKLIK 237
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKII 289
+ K + EKEK +E ++S + ++I+ + G+ I Y+ +L I
Sbjct: 238 DIISDNIKKQKEKPEKEKAYILMENNLNSYLKTMVNIRVNNQGSGKIEILYKNKNELDRI 297
Query: 290 CSLLGE 295
+L+G
Sbjct: 298 INLIGN 303
>gi|241766006|ref|ZP_04763927.1| parB-like partition protein [Acidovorax delafieldii 2AN]
gi|241364005|gb|EER59261.1| parB-like partition protein [Acidovorax delafieldii 2AN]
Length = 307
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 95/302 (31%), Positives = 157/302 (51%), Gaps = 15/302 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+G + D E+ + + +VP + PR + L
Sbjct: 4 KKPKGLGRGLEALLG--PKVEDKVEQAQAAEAGLPSSLPLSELVPGVYQPRTRMDEGALY 61
Query: 65 DLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+L +SIK+ GI+QP++VR G Y+IIAGERRFRA+++A L+ VPV++R+V ++S
Sbjct: 62 ELAESIKAQGIMQPILVRRLTDGEHAGKYEIIAGERRFRASRLAGLAAVPVLVRDVPDES 121
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++LI E+G T VG+SRS +N+LR+L L
Sbjct: 122 AAAMALIENIQREDLNPLEEAQGLQRLIREFGLTHELAAQAVGRSRSAASNLLRLLNLAE 181
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V+ M+ +I +GHAR L+S + + E + E
Sbjct: 182 PVQTMLMAGDIDMGHARALLSLDRAAQITAGNQIAAKKLSVREAEALVKKIGAEFNLVSP 241
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNN---------KGQFCIKYETNEQLKIICS 291
+EK + L +E+++S + + ++ + G+ I++ + E L +
Sbjct: 242 RPKKEKSRDLKRVEEELSDLLMAEVEVRVKKRVKRNGRVEDMGELAIQFGSLEALNGLID 301
Query: 292 LL 293
L
Sbjct: 302 RL 303
>gi|108805988|ref|YP_645925.1| chromosome segregation DNA-binding protein [Rubrobacter
xylanophilus DSM 9941]
gi|108767231|gb|ABG06113.1| chromosome segregation DNA-binding protein [Rubrobacter
xylanophilus DSM 9941]
Length = 288
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 111/299 (37%), Positives = 169/299 (56%), Gaps = 18/299 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+R LGRGL+ALI + + I +I PN PR F G+
Sbjct: 1 MGRRGLGRGLSALIA----------TGESVGGLKFEELPISAIRPNSFQPRRNFPEAGIR 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ GI+QPL+VR+ + G +++IAGERR RAA+ A L VPV+IR S+E+
Sbjct: 51 ELAASIREVGILQPLVVRSTERG-FELIAGERRLRAAREAGLERVPVLIRQAGADESMEL 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLNPLE A Y+ L+ +G T+ + + +GKSR+ V N LR+++LP VR
Sbjct: 110 ALVENLQREDLNPLETAAAYQALMDSFGLTKEQLATRLGKSRAAVTNTLRLVQLPERVRA 169
Query: 185 MIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
M++ IS GHAR L S + + LA+ + +K+SVR TEE+V+ + +E+ ++
Sbjct: 170 MLQDGRISEGHARALLGLKSEEEIVRLAERVHEEKLSVRKTEEMVRRMLSGEERGERGSG 229
Query: 242 GSR----EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
R KE ++ + I K+ L + I+ G+ I++ EQL+ I SLL
Sbjct: 230 SRRGERSSKEGEYAEVSRMIQEKIELPVRIRPSRRGGKLEIRFRDREQLEAIVSLLTSG 288
>gi|312128791|ref|YP_003993665.1| parb-like partition protein [Caldicellulosiruptor hydrothermalis
108]
gi|311778810|gb|ADQ08296.1| parB-like partition protein [Caldicellulosiruptor hydrothermalis
108]
Length = 285
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 99/290 (34%), Positives = 160/290 (55%), Gaps = 11/290 (3%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD---CISIHSIVPNPHNPRNYFESEGL 63
K+RLGRGL AL G+ S + E+ + I I I + + PR F E +
Sbjct: 2 KKRLGRGLDALFGDEISSSGKEFETGSDGKENIEKIEEIDIDLIELSENQPRKIFNEEEI 61
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SIKS G+IQPL+V+ + +IAGERR RA KMA + +V I++ +N +
Sbjct: 62 EELASSIKSVGLIQPLVVQKKGDKYV-LIAGERRLRACKMAGIEKVKCIVKEYENPLEIA 120
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ +EN+QRKDLNP E+AL +++L+ E+GYTQ ++ +G SRS +AN LRIL L +
Sbjct: 121 L--IENIQRKDLNPYEKALAFKRLMDEFGYTQEELARRLGISRSKLANTLRILNLGQEII 178
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
++I + +IS GHA+ L+S ++ EL Q ++ K++ E
Sbjct: 179 DLIIEGKISEGHAKVLLSVESEEQRKKLAELVAEKNLSVRELEQIVKSRGYKKEFELESE 238
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+E + + GL + I+ + N+G+ I++ ++E+L+ I S+L
Sbjct: 239 IIREIE-----ENLMKLFGLRVKIQKKKNRGKIEIEFSSDEELEKIISIL 283
>gi|30023503|ref|NP_835134.1| stage 0 sporulation protein J [Bacillus cereus ATCC 14579]
gi|228911318|ref|ZP_04075122.1| Stage 0 sporulation protein J [Bacillus thuringiensis IBL 200]
gi|228924224|ref|ZP_04087495.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228942628|ref|ZP_04105160.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228961743|ref|ZP_04123346.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228975558|ref|ZP_04136110.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982194|ref|ZP_04142483.1| Stage 0 sporulation protein J [Bacillus thuringiensis Bt407]
gi|229051148|ref|ZP_04194692.1| Stage 0 sporulation protein J [Bacillus cereus AH676]
gi|229112892|ref|ZP_04242423.1| Stage 0 sporulation protein J [Bacillus cereus Rock1-15]
gi|229130725|ref|ZP_04259678.1| Stage 0 sporulation protein J [Bacillus cereus BDRD-Cer4]
gi|229153638|ref|ZP_04281814.1| Stage 0 sporulation protein J [Bacillus cereus m1550]
gi|229193730|ref|ZP_04320671.1| Stage 0 sporulation protein J [Bacillus cereus ATCC 10876]
gi|296505907|ref|YP_003667607.1| stage 0 sporulation protein J [Bacillus thuringiensis BMB171]
gi|29899064|gb|AAP12335.1| Stage 0 sporulation protein J [Bacillus cereus ATCC 14579]
gi|228589755|gb|EEK47633.1| Stage 0 sporulation protein J [Bacillus cereus ATCC 10876]
gi|228629824|gb|EEK86477.1| Stage 0 sporulation protein J [Bacillus cereus m1550]
gi|228652742|gb|EEL08627.1| Stage 0 sporulation protein J [Bacillus cereus BDRD-Cer4]
gi|228670571|gb|EEL25884.1| Stage 0 sporulation protein J [Bacillus cereus Rock1-15]
gi|228722211|gb|EEL73612.1| Stage 0 sporulation protein J [Bacillus cereus AH676]
gi|228777546|gb|EEM25824.1| Stage 0 sporulation protein J [Bacillus thuringiensis Bt407]
gi|228784168|gb|EEM32195.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228797937|gb|EEM44947.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228817054|gb|EEM63147.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228835442|gb|EEM80812.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228848336|gb|EEM93186.1| Stage 0 sporulation protein J [Bacillus thuringiensis IBL 200]
gi|296326959|gb|ADH09887.1| stage 0 sporulation protein J [Bacillus thuringiensis BMB171]
Length = 273
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 98/268 (36%), Positives = 157/268 (58%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEILVTELRPNPYQPRKHFNKEAIQELAISIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRAAK A L +VP ++R + + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRFRAAKEAGLEKVPAVVRQLTEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H R T+ SL +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQHVSRETK--KVKKERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLAQKN 273
>gi|312129688|ref|YP_003997028.1| parb-like partition protein [Leadbetterella byssophila DSM 17132]
gi|311906234|gb|ADQ16675.1| parB-like partition protein [Leadbetterella byssophila DSM 17132]
Length = 288
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 91/295 (30%), Positives = 154/295 (52%), Gaps = 11/295 (3%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
N K LG+GL++L+ E + E + I I +I NP+ PR F+ E
Sbjct: 2 NIKRKMGLGKGLSSLLSETPAEVVQEEHDSF-------EIPIDAIETNPYQPRTQFDQEA 54
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
LE+LC SI+ G+IQP+ VR I + Y++I+GERR +A+++A L +P IR + L
Sbjct: 55 LEELCASIRVQGVIQPIAVRKIGDK-YQLISGERRLKASQLAGLKTIPAYIREATDTQML 113
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+ ++ENVQR++LNP+E A+ Y++L+ E Q ++ + VGK+RS + N LR+L LP V
Sbjct: 114 ELGLIENVQRENLNPMEIAMAYKRLLEECELKQEELATRVGKNRSTINNFLRLLALPHEV 173
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+E + + ++S+GHAR L+ + ++ ++ + N K +G
Sbjct: 174 QEGLAEGKLSMGHARALLGLESQELMLKLYQEILTRDLSVRKVEELVKNVNIKSSTTKKG 233
Query: 243 SREKEK--YLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICSLLG 294
E +L + G + ++ + KG+ I Y + +L+ I L
Sbjct: 234 KTVSEPKKFLETYQHHFGEIFGRKVIVQADAHQKGEIKIPYASRAELEQIMEKLK 288
>gi|229148029|ref|ZP_04276368.1| Stage 0 sporulation protein J [Bacillus cereus BDRD-ST24]
gi|228635454|gb|EEK91945.1| Stage 0 sporulation protein J [Bacillus cereus BDRD-ST24]
Length = 273
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 98/268 (36%), Positives = 157/268 (58%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEILVTELRPNPYQPRKHFNKEAIQELAISIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRAAK A L +VP ++R + + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRFRAAKEAGLEKVPAVVRQLTEQQMMEFALLENLQREDLNPMEEAMAYQILMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H R T+ SL +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQHVSRETK--KVKKERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLAQKN 273
>gi|239813069|ref|YP_002941979.1| parB-like partition protein [Variovorax paradoxus S110]
gi|239799646|gb|ACS16713.1| parB-like partition protein [Variovorax paradoxus S110]
Length = 315
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 104/312 (33%), Positives = 170/312 (54%), Gaps = 20/312 (6%)
Query: 1 MSNNYSKRRLGRGLAALIG-EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K LGRGL AL+G S DS ++ + + + +V + PR +
Sbjct: 1 MATKKPK-GLGRGLEALLGPTAAPSADSSGTDEGAAAQNPNTLMLDEMVAGVYQPRTRMD 59
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAID-------NGLYKIIAGERRFRAAKMASLSEVPVI 112
L +L +SIK+ GI+QP++VR +D N Y+IIAGERRFRAA++A L VPV+
Sbjct: 60 EGALYELAESIKAQGIMQPILVRRLDAESAAAKNAEYEIIAGERRFRAARLAGLDRVPVL 119
Query: 113 IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
+R+V N+++ ++++EN+QR+DLNPLEEA G ++L+SE+G T VG+SRS +N+
Sbjct: 120 VRDVPNEAAAAMSLIENIQREDLNPLEEAQGLQRLVSEFGLTHEAAAQAVGRSRSAASNL 179
Query: 173 LRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
LR+L L ++M+ +I +GHAR L + ++ A I +KKMSVR+ E LV+
Sbjct: 180 LRLLNLAEPAQQMLMAGDIDMGHARALLSLDRGTQITAANQIAAKKMSVREAEALVKRLA 239
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI---KHRNNKGQFC------IKYE 281
+ EK + L +E++++ + + + K G+ I +
Sbjct: 240 AEFTLTPSRRSNDGEKSRDLQRVEEELADLLTAEVEVRIKKRSKRGGKVEESGELAIHFG 299
Query: 282 TNEQLKIICSLL 293
+ E L + +
Sbjct: 300 SIEALNGLIERI 311
>gi|56965869|ref|YP_177603.1| stage 0 sporulation protein J, antagonist of Soj [Bacillus clausii
KSM-K16]
gi|56912115|dbj|BAD66643.1| stage 0 sporulation protein J [Bacillus clausii KSM-K16]
Length = 289
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 163/296 (55%), Gaps = 16/296 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LG+GL A E + + E + + + PNP+ PR F
Sbjct: 1 MARTAGKKGLGKGLQAFFPE----------QEDKQEEQIVQVDLADVRPNPYQPRKTFSE 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SI+ HGI+Q + Y+I+ GERR +AAK A L+++PVI++ +D
Sbjct: 51 EALKELSNSIREHGILQ-PVTVRKAIKGYEIVMGERRVKAAKQAGLTQIPVIVQELDENK 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DLNP+EEA+ YE+L+ TQ + +GKSR H+AN +R+L+LP
Sbjct: 110 MMEIALIENLQREDLNPIEEAIAYEKLMEHTNSTQEQLAKRLGKSRPHIANHMRLLQLPK 169
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+E I ++++GH R L L + ++ K+SVR+ E+LVQ + +
Sbjct: 170 VVQEFISVGKLTMGHGRALLGLQDKQKLSQLLEKVLQDKLSVREVEQLVQRLNEHVPRET 229
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + + + ++++ +G ++ IK KG+ I Y + + L+ I SLL
Sbjct: 230 KQVKVK--LPPIIKEQQERLRDTLGTSVLIKPGKKKGKIEIDYFSEDDLERILSLL 283
>gi|332672286|ref|YP_004455294.1| parB-like partition protein [Cellulomonas fimi ATCC 484]
gi|332341324|gb|AEE47907.1| parB-like partition protein [Cellulomonas fimi ATCC 484]
Length = 408
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 4/276 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G + E + + SI PNP PR F+ + LE+L SI+ G++QP
Sbjct: 122 GPAALPAAEIDGLVEVPGARFAELPVTSIRPNPRQPRTVFDEDALEELVGSIREIGVLQP 181
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VRA+ +G Y++I GERR+RA + A L +P I+R ++ L A++EN+ R LNPL
Sbjct: 182 VVVRAVGDG-YELIMGERRWRATQAAGLDTIPAIVRETEDSDLLRDALLENLHRAQLNPL 240
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ ++G T ++ + + +SR ++N LR+LKLP V+ + +S GHAR
Sbjct: 241 EEAAAYQQLLDDFGCTHEELATRIHRSRPQISNTLRLLKLPPLVQRRVAAGVLSAGHARA 300
Query: 199 L---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
L + LAQ IV++ +SVR EE+V + ++ + ++ L DL
Sbjct: 301 LLGLSDGAAIERLAQRIVAEGLSVRAVEEIVSMGVDGATPARRAAPRAGDRNAALDDLAA 360
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICS 291
++S + + + +G+ +++ + + L I
Sbjct: 361 RLSDRFDTRVKVSLGKTRGRLTVEFASVQDLNRILE 396
>gi|28899851|ref|NP_799456.1| ParB family protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153838479|ref|ZP_01991146.1| ParB family protein [Vibrio parahaemolyticus AQ3810]
gi|260361983|ref|ZP_05774988.1| spoOJ protein [Vibrio parahaemolyticus K5030]
gi|260876530|ref|ZP_05888885.1| spoOJ protein [Vibrio parahaemolyticus AN-5034]
gi|260897413|ref|ZP_05905909.1| spoOJ protein [Vibrio parahaemolyticus Peru-466]
gi|28808103|dbj|BAC61340.1| ParB family protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149748102|gb|EDM58961.1| ParB family protein [Vibrio parahaemolyticus AQ3810]
gi|308087891|gb|EFO37586.1| spoOJ protein [Vibrio parahaemolyticus Peru-466]
gi|308090378|gb|EFO40073.1| spoOJ protein [Vibrio parahaemolyticus AN-5034]
gi|308114129|gb|EFO51669.1| spoOJ protein [Vibrio parahaemolyticus K5030]
gi|328471202|gb|EGF42104.1| ParB family protein [Vibrio parahaemolyticus 10329]
Length = 293
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 92/296 (31%), Positives = 174/296 (58%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTET----IPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + +++ ++I + P + PR
Sbjct: 1 MSKRGLGKGLDALLSTSSFAREKQQIASQSQALSADGELTELAIGQLQPGIYQPRKDMAP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G ++IIAGERR+RAAK A L VP +++ V++++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRQVVGGQFEIIAGERRWRAAKQAGLKRVPCLVKKVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ +L +
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQDEFSLTHQQVADVIGKSRTTVSNLLRLNQLDA 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ ++++ +GHAR L + + +AQ++ K+M+VR TE+LV++ +
Sbjct: 181 DVKRLVAEKQLEMGHARALLALEGEQQVEVAQMVAKKQMTVRQTEQLVKK-----CLAPQ 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ +++++ + K+S + +S+ N K + I + +L + + L
Sbjct: 236 NEQKAQQEDTEAEQMSHKLSQLLDAKVSLSRSANGKAKLTISIDEPHKLDQLIAKL 291
>gi|269962680|ref|ZP_06177025.1| Probable chromosome-partitioning protein parB [Vibrio harveyi 1DA3]
gi|269832603|gb|EEZ86717.1| Probable chromosome-partitioning protein parB [Vibrio harveyi 1DA3]
Length = 293
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 92/296 (31%), Positives = 172/296 (58%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSID----SPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + ++I + P + PR
Sbjct: 1 MSKRGLGKGLDALLSTSSLAREKQHIASHSQALSADGELTDLAIGQLQPGVYQPRKDMAP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + +G ++IIAGERR+RAAK A L VP +++ V++++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRQVASGQFEIIAGERRWRAAKQAGLKRVPCLVKKVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQDEFTLTHQQVADVIGKSRTTVSNLLRLNQLEI 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR L + + +AQ + K+M+VR TE+LV++ +
Sbjct: 181 DVKGLVADKKLEMGHARALLALEGEQQVEVAQQVAKKQMTVRQTEQLVKK-----CLAPQ 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +++++ + K+S + +S ++ N K + I + +L + + L
Sbjct: 236 NEQKAQQEDTEAEQMSHKLSQLLDAKVSLVRSANGKAKVTISLDEPHKLDQLIAKL 291
>gi|91226230|ref|ZP_01261070.1| ParB family protein [Vibrio alginolyticus 12G01]
gi|91189241|gb|EAS75520.1| ParB family protein [Vibrio alginolyticus 12G01]
Length = 295
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 92/298 (30%), Positives = 172/298 (57%), Gaps = 12/298 (4%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSID----SPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
N SKR LG+GL AL+ + + + + + + ++I + P + PR
Sbjct: 1 NPMSKRGLGKGLDALLSTSSFAREKQHIASHSQELSADGELTDLAIGQLQPGVYQPRKDM 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E LE+L SI+S GIIQP++VR +++G ++IIAGERR+RAA+ A L VP +++ V++
Sbjct: 61 APEALEELAASIQSQGIIQPIVVRQVESGQFEIIAGERRWRAARQAGLKRVPCLVKKVED 120
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ +L
Sbjct: 121 RAAIAMALIENIQREDLNVIEEAQALERLQDEFTLTHQQVADVIGKSRTTVSNLLRLNQL 180
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+ ++ +++ +GHAR L + + +AQ + K+M+VR TE+LV++
Sbjct: 181 EVDVKGLVADKKLEMGHARALLALEGEQQVEVAQQVAKKQMTVRQTEQLVKK-----CLA 235
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++++ + K+S + +S+ N K + I + +L + + L
Sbjct: 236 PQNEQKGQQEDTEAEQMSHKLSQLLDAKVSLTRSANGKAKLTISLDEPHKLDQLIAKL 293
>gi|94986430|ref|YP_605794.1| parB-like protein partition proteins [Deinococcus geothermalis DSM
11300]
gi|94556711|gb|ABF46625.1| parB-like partition protein [Deinococcus geothermalis DSM 11300]
Length = 281
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 98/294 (33%), Positives = 155/294 (52%), Gaps = 18/294 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K LGRGL AL+ P+ + + + + IV + PR FE
Sbjct: 1 MS---KKSSLGRGLDALLS-------RPQSAESSSGTAVQNVRVDRIVQAAYQPRQVFEP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L SI+ G++QPL+VR ++I+AGERR+RAA++A L EVPV+IR++ ++
Sbjct: 51 EALAELAGSIREKGVLQPLLVRPRG-ENFEIVAGERRWRAAQLAGLVEVPVLIRDLGDRE 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+AI+EN+QR+DL PLEEA Y+ L+ + Q + VGK RS ++N LR+L LP
Sbjct: 110 ALELAIIENLQREDLGPLEEARAYQALLDQGL-NQEAVAQAVGKGRSTISNALRLLTLPE 168
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ + K EIS GHAR +++ + + + + V+E + K +
Sbjct: 169 AALRALEKGEISAGHARAILAQPEEDRTWALDQIRTRRLN-----VREAEALKRTARTTA 223
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ +E +S + G + I +KG+ + Y + E+L I LLG
Sbjct: 224 PLPVNPPRPYRQVELALSRRTGTKVRIT-GEDKGRVELNYASREELDRILELLG 276
>gi|319790749|ref|YP_004152389.1| parb-like partition protein [Variovorax paradoxus EPS]
gi|315593212|gb|ADU34278.1| parB-like partition protein [Variovorax paradoxus EPS]
Length = 313
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 103/310 (33%), Positives = 171/310 (55%), Gaps = 18/310 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSID---SPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
M+ K LGRGL AL+G + + P + + + +V + PR
Sbjct: 1 MATKKPK-GLGRGLEALLGPTAAPAADHGNSGTEEGAAPPNPTTLMLDQMVAGVYQPRTR 59
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAID-------NGLYKIIAGERRFRAAKMASLSEVP 110
+ L +L +SIK GI+QP++VR +D N Y+IIAGERRFRAAK+A L VP
Sbjct: 60 MDEGALYELAESIKVQGIMQPILVRRLDAESAAAKNAEYEIIAGERRFRAAKLAGLESVP 119
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
V++R+V N+++ ++++EN+QR+DLNPLEEA G ++L++E+G T VG+SRS +
Sbjct: 120 VLVRDVPNEAAAAMSLIENIQREDLNPLEEAQGLQRLVAEFGLTHEMAAQAVGRSRSAAS 179
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
N+LR+L L ++M+ +I +GHAR L + ++ A I +KKMSVR+TE LV++
Sbjct: 180 NLLRLLNLAEPAQQMLMAGDIDMGHARALLSLDRGTQITAANQIAAKKMSVRETEALVKK 239
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-----KGQFCIKYETN 283
+ S EK + L +E++++ + + ++ + G+ I + +
Sbjct: 240 LAAEFTLTPSRRGNSGEKSRDLQRVEEELADLLTAEVEVRIKKRTKRGESGELAIHFGSI 299
Query: 284 EQLKIICSLL 293
E L + +
Sbjct: 300 EALNGLIERI 309
>gi|228968631|ref|ZP_04129614.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228791060|gb|EEM38678.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar sotto
str. T04001]
Length = 273
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 99/266 (37%), Positives = 158/266 (59%), Gaps = 7/266 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEILVTELRPNPYQPRKHFNKEAIQELAISIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRAAK A L +VP ++R + + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRFRAAKEAGLEKVPAVVRQLTEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H RTL++ D L +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQHVSRETK--KVKKERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGE 295
+ KG+ I++ E L I LL +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLSQ 271
>gi|229181725|ref|ZP_04309048.1| Stage 0 sporulation protein J [Bacillus cereus 172560W]
gi|228601758|gb|EEK59256.1| Stage 0 sporulation protein J [Bacillus cereus 172560W]
Length = 273
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 99/268 (36%), Positives = 160/268 (59%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEILVTELRPNPYQPRKHFNKEAIQELAISIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRFRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H RTL++ D L +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQHVSRETK--KVKKERNIFFVEHETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLAQKN 273
>gi|322421881|ref|YP_004201104.1| parB-like partition protein [Geobacter sp. M18]
gi|320128268|gb|ADW15828.1| parB-like partition protein [Geobacter sp. M18]
Length = 279
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 100/293 (34%), Positives = 156/293 (53%), Gaps = 19/293 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LG+G+ AL+ E + I I PN PR F +E LE
Sbjct: 2 VKKMGLGKGMGALLP-----------VVEDHGKKYFSCPIEEIKPNKEQPRKTFVNEKLE 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ GIIQPL+V G Y++IAGERR+RAA+ A L EVPV+I++V +++LE+
Sbjct: 51 ELANSIREKGIIQPLVVVK-KAGHYELIAGERRWRAAQKAGLREVPVVIQDVSEETALEM 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +EEA Y L+ + +Q ++ VGK RS +AN LR+L+LP ++
Sbjct: 110 ALIENIQREDLNAVEEAEAYHALLERFSLSQEELAKRVGKERSTIANALRLLRLPVEIKR 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ ++ IS+GHAR L++ DP IV ++SVR+ E LV+ +
Sbjct: 170 DVAEDRISMGHARALLTLEDPEEQKAARDEIVKGRLSVREAEALVKRKKA----GPPKKA 225
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ DL +++ +++K G+ I + ++L I LL
Sbjct: 226 AKPTLDPDQKDLLERMQRHFAAKVALKRAGRGGKLEISFADQKELARIIDLLN 278
>gi|229014645|ref|ZP_04171759.1| Stage 0 sporulation protein J [Bacillus mycoides DSM 2048]
gi|228746656|gb|EEL96545.1| Stage 0 sporulation protein J [Bacillus mycoides DSM 2048]
Length = 273
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 97/268 (36%), Positives = 158/268 (58%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR YF E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEIIVTELRPNPYQPRKYFNKEAIQELAASIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H R T+ SL +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + ++ + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEQIVQEINQ--RVSRETQQVKKERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLSQKN 273
>gi|229020704|ref|ZP_04177431.1| Stage 0 sporulation protein J [Bacillus cereus AH1273]
gi|229026920|ref|ZP_04183243.1| Stage 0 sporulation protein J [Bacillus cereus AH1272]
gi|228734378|gb|EEL85049.1| Stage 0 sporulation protein J [Bacillus cereus AH1272]
gi|228740599|gb|EEL90870.1| Stage 0 sporulation protein J [Bacillus cereus AH1273]
Length = 273
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 97/268 (36%), Positives = 158/268 (58%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEIIVTELRPNPYQPRKHFNKEAIQELAASIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L+SE
Sbjct: 68 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMSELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H R T+ SL +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +++ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQSVSRETKQIK--KDRNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLSQKN 273
>gi|218887135|ref|YP_002436456.1| parB-like partition protein [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758089|gb|ACL08988.1| parB-like partition protein [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 310
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 105/310 (33%), Positives = 170/310 (54%), Gaps = 32/310 (10%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
R LGRGL AL + P + + ++ PNP PR F LE+L
Sbjct: 6 RGLGRGLDALFKGYQEQPK---------PSDIRTLPLRALRPNPGQPRKMFTEAALEELA 56
Query: 68 QSIKSHGIIQPLIVRAID---------NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
SI+S G++QPL+VR I + Y+I+AGERR+RA++MA L EVPV+IR + +
Sbjct: 57 ASIRSQGVLQPLLVRPIPGTEGQAEGASQAYEIVAGERRWRASQMAGLREVPVLIRELTD 116
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +L +A++EN+QR+DLNP+EEAL ++L ++G +Q D+ +GKSR VAN LR+L L
Sbjct: 117 QETLAVALIENLQREDLNPMEEALAMQELREQFGLSQEDLAQKLGKSRPAVANTLRLLHL 176
Query: 179 PSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P + RE +R+ +S GHAR T+ +L + I+S ++SVR+ E ++
Sbjct: 177 PEAAREDLREARLSAGHARALLTVTDPEPQDTLRRRILSDRLSVREAEAAAAHWRDRGAL 236
Query: 236 RKKIFEGSREKE-----------KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNE 284
+ + + +E + L+ ++ + L +S+ KG+ + +E++E
Sbjct: 237 PEPLAVPPKREEARPVRPPHRVAPSMRSLQGRLHEALSLRVSVSGTEEKGKITLNFESSE 296
Query: 285 QLKIICSLLG 294
QL + S LG
Sbjct: 297 QLAQLLSRLG 306
>gi|325066330|ref|ZP_08125003.1| parB-like partition protein [Actinomyces oris K20]
Length = 340
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 9/287 (3%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
A + E + + I + I PNP PR F+ E + +L SI G
Sbjct: 46 DATVAEEETADTGADDLVPVPGARFAEIPVGLIHPNPRQPRQVFDEEDIAELAASIAEVG 105
Query: 75 IIQPLIVRAIDNGL-----YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
++QP++VR + Y++I GERR RA+K A L +P ++R+ D+ L A++EN
Sbjct: 106 LLQPIVVRQVPTAPGEELRYELIMGERRLRASKEAGLETIPAVVRDTDDVDLLRDALLEN 165
Query: 130 VQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
+ R LNPLEEA Y+QL+ ++ T ++ + +SRS ++N LR++KLP V+ +
Sbjct: 166 LHRVQLNPLEEAAAYQQLLEDFQCTHAELSERIARSRSQISNTLRLMKLPPLVQRRLAAN 225
Query: 190 EISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
IS GHAR L + ++ LAQ +V++ +SVR TEELV + + + R +
Sbjct: 226 VISAGHARALLGLPNAAEMERLAQRVVAEGLSVRATEELVALHEEPEPGPDQP-RVLRAR 284
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
L L ++S + + KG+ I++ +E L + L
Sbjct: 285 STPLPALSTRLSDAFDTRVKVTRGAKKGRITIEFAGDEDLARLVDAL 331
>gi|228955729|ref|ZP_04117724.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229072944|ref|ZP_04206140.1| Stage 0 sporulation protein J [Bacillus cereus F65185]
gi|228710190|gb|EEL62168.1| Stage 0 sporulation protein J [Bacillus cereus F65185]
gi|228803957|gb|EEM50581.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 273
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 99/268 (36%), Positives = 160/268 (59%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEILVTELRPNPYQPRKHFNKEAIQELAISIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRFRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H RTL++ D L +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQHVSRETK--KVKKERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLAQKN 273
>gi|294661138|ref|YP_003573013.1| hypothetical protein Aasi_1530 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336288|gb|ACP20885.1| hypothetical protein Aasi_1530 [Candidatus Amoebophilus asiaticus
5a2]
Length = 296
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 99/295 (33%), Positives = 159/295 (53%), Gaps = 12/295 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LGRGL AL+ + + + E I I NP PR F+ E L
Sbjct: 6 TKKNALGRGLQALLQDSSYFTEKGEINP------LRETPIEQIEVNPLQPRKTFDEEALN 59
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SIK HG+IQPL +R I Y++IAGERR +A++ A L VP IR D++ LE+
Sbjct: 60 ELSESIKVHGVIQPLTIRQIGPNKYQLIAGERRLQASRRAGLKSVPTYIRIADDQQMLEM 119
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+ LNP+E AL Y++L++E Q +G+ VGK+R+ V N LR+LKLP ++
Sbjct: 120 ALVENIQRESLNPIEIALSYQRLLTECNLKQETLGNRVGKNRATVNNYLRLLKLPPDIQI 179
Query: 185 MIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQ--DNKKEKRKKI 239
+R + IS+GHAR L++ + + I+ + +SVR EEL + ++ K
Sbjct: 180 ALRDQRISMGHARALINVGTMTAQLGILEEIIKQDLSVRKVEELARNISNKSQAATSHKK 239
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ L ++ K+++++ + + + G+ I + + L I +L
Sbjct: 240 INTNATFSSMLEEITTKLTNQLATPVKARTYSQGNGEISITFSNVQDLNRITHIL 294
>gi|326772851|ref|ZP_08232135.1| ParB family protein [Actinomyces viscosus C505]
gi|326637483|gb|EGE38385.1| ParB family protein [Actinomyces viscosus C505]
Length = 529
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 9/287 (3%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
A E + ++ I + I PNP PR F+ E + +L SI G
Sbjct: 235 DATDAEEETADTGADELVPVPGARFAEIPVGLIHPNPRQPRQVFDEEDIAELAASIAEVG 294
Query: 75 IIQPLIVRAIDNGL-----YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
++QP++VR + Y++I GERR RA+K A L +P ++R+ D+ L A++EN
Sbjct: 295 LLQPIVVRQVPTAPGEELRYELIMGERRLRASKEAGLETIPAVVRDTDDVDLLRDALLEN 354
Query: 130 VQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
+ R LNPLEEA Y+QL+ ++ T ++ + +SRS ++N LR++KLP V+ +
Sbjct: 355 LHRVQLNPLEEAAAYQQLLEDFQCTHAELSERIARSRSQISNTLRLMKLPPLVQRRLAAN 414
Query: 190 EISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
IS GHAR L + ++ LAQ +V++ +SVR TEELV + + + R +
Sbjct: 415 VISAGHARALLGLPNAAEMERLAQRVVAEGLSVRATEELVALHEEPEPGPDQP-RVLRAR 473
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
L L ++S + + KG+ I++ +E L + L
Sbjct: 474 STPLPALSTRLSDAFDTRVKVTRGAKKGRITIEFAGDEDLARLVDAL 520
Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETI 35
M+ +R LGRGL ALI E + + +
Sbjct: 1 MA--QKRRGLGRGLQALIPEAQKEKVPAASRPSDV 33
>gi|89898875|ref|YP_521346.1| parB-like protein partition proteins [Rhodoferax ferrireducens
T118]
gi|89343612|gb|ABD67815.1| chromosome segregation DNA-binding protein [Rhodoferax
ferrireducens T118]
Length = 313
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 90/304 (29%), Positives = 156/304 (51%), Gaps = 15/304 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPES--QDCISIHSIVPNPHNPRNYFESEG 62
+ LGRGL AL+G + + + + + +VP + PR +
Sbjct: 4 KKPKGLGRGLDALLGPKVAESAALDGSVPGAGNAGLPTTLLLIDLVPGQYQPRTRMDEGA 63
Query: 63 LEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L +SIK+ GI+QP++VR + G Y+IIAGERRFRAAK+A L VPV++R+V N
Sbjct: 64 LYELAESIKAQGIMQPILVRQLLDGVSQGKYEIIAGERRFRAAKLAGLDSVPVLVRDVAN 123
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ + +A++EN+QR+DLNPLEEA G ++L+ E+G+T VG+SRS +N+LR+L L
Sbjct: 124 EDAAAMALIENIQREDLNPLEEAQGLQRLVKEFGHTHEQAAQAVGRSRSAASNLLRLLNL 183
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ ++ +GHAR L+ + S+ E + +
Sbjct: 184 ADPVQTMLMAGDLDMGHARALLVLDRATQITAATQISARSLSVREAERLAKKLSADFSLT 243
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN---------KGQFCIKYETNEQLKII 289
EK + + +E+++S + + ++ + G+ I++ + ++L +
Sbjct: 244 SVRPKPEKSRDMKRVEEELSDLLTAAVEVRVKKRVKRAGRLEEMGELSIQFGSLDELNGL 303
Query: 290 CSLL 293
L
Sbjct: 304 IDKL 307
>gi|87122928|ref|ZP_01078793.1| ParB family protein [Marinomonas sp. MED121]
gi|86161801|gb|EAQ63101.1| ParB family protein [Marinomonas sp. MED121]
Length = 294
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 106/281 (37%), Positives = 162/281 (57%), Gaps = 7/281 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
KR LGRGL AL+ + D + + + PR S L+
Sbjct: 3 VKKRGLGRGLDALLAPQAVANDVESNEPTEQLNGLTYLDHDLLCKGKFQPRRDMNSVQLD 62
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SIK GI+QP++VR + NG Y+IIAGERR+RAAK+A LS+VPVI+R+V++ ++ +
Sbjct: 63 ELAISIKQQGIMQPIVVRPVSNGKYEIIAGERRWRAAKIAELSKVPVIVRHVEDSDAVVL 122
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEA+ ++LI E+ TQ ++ VGKSRS VAN+LR+L L VR
Sbjct: 123 ALIENIQREDLNPVEEAIALQRLIEEFELTQQEVAETVGKSRSAVANLLRLLSLTPEVRR 182
Query: 185 MIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ ++ +GHAR L+ + A +V+K MSVR+TE LV + +++ E
Sbjct: 183 LLEHGDLEMGHARALLPLEHDEQILAASQVVTKSMSVRETERLV----KSIQFKQQNEEQ 238
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYET 282
E + E+ IS K+ + I+ KG+ I+Y
Sbjct: 239 EAENLPDFSQREESISQKINAAVKIQQNPKGKGKLVIEYRN 279
>gi|119962086|ref|YP_949868.1| chromosome partitioning protein (ParB) [Arthrobacter aurescens TC1]
gi|119948945|gb|ABM07856.1| putative chromosome partitioning protein (ParB) [Arthrobacter
aurescens TC1]
Length = 415
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 89/273 (32%), Positives = 143/273 (52%), Gaps = 6/273 (2%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR---AIDN 86
+ E I + I PN PR+ F+ + + +L S++ G++QP++VR
Sbjct: 140 ELVEVPGARFAEIPVGDIHPNRKQPRSVFDEDDMAELVHSVREIGVLQPIVVRTSTEKGG 199
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
Y+++ GERR+RA + A L +P I+R+ + L A++EN+ R LNPLEEA Y+Q
Sbjct: 200 EPYELVMGERRWRAVQAAGLETIPAIVRDTTDDDLLRDALLENLHRSQLNPLEEAAAYQQ 259
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSD-- 204
L+ ++G T + +G+SR V+N LR+LKLP V+ + +S GHAR L++ D
Sbjct: 260 LLEDFGTTHEQLADRIGRSRPQVSNTLRLLKLPPLVQRRVAAGVLSAGHARALLALPDAA 319
Query: 205 -PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
+AQ IV++ MSVR TEE V + K + + L L +S ++
Sbjct: 320 AMERMAQKIVAEGMSVRATEESVALYQDPTTPAKSSIPKPNARHERLDYLASSLSDRLDT 379
Query: 264 NISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
N+ I KG+ I++ + E L I +LG
Sbjct: 380 NVKITLGARKGRVSIEFASVEDLNRIMDVLGPG 412
Score = 39.3 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP 36
MS +R LGRGL ALI + + + +
Sbjct: 1 MSE--KRRGLGRGLGALIPSSAAAQGNGAAPSRPVD 34
>gi|260774970|ref|ZP_05883870.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio coralliilyticus ATCC BAA-450]
gi|260609060|gb|EEX35219.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio coralliilyticus ATCC BAA-450]
Length = 293
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 181/296 (61%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEK----KTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + +SI+S+ P + PR E
Sbjct: 1 MSKRGLGKGLDALLSTSSLAREKQQSALHSQELSSDGELTDLSINSLKPGVYQPRKDMEP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR ++N ++IIAGERR+RAA+ A L +VP +I+NVD+++
Sbjct: 61 EALEELAASIESQGIIQPIVVRQVENDKFEIIAGERRWRAARKAGLKQVPCVIKNVDDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA+ ++L E+ T + ++GKSR+ V+N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNVIEEAVALDRLQEEFSLTHQQVAEVIGKSRATVSNLLRLNQLEM 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ ++ + +GHAR L + + + +A+++ K+M+VR TE+LV++ + +
Sbjct: 181 DVKYLLSEKMLEMGHARALLALEGEEQVEVAELVAKKRMTVRQTEQLVKK-----CLQPQ 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
E + ++ + +K+S + ++I + +N + I + +L+ + + L
Sbjct: 236 SEEKNELQDTEAQQMSQKLSEMLSAKVAIVRAKNGASKVTISLDEPHKLEQLIAKL 291
>gi|297572336|ref|YP_003698110.1| parB-like partition protein [Arcanobacterium haemolyticum DSM
20595]
gi|296932683|gb|ADH93491.1| parB-like partition protein [Arcanobacterium haemolyticum DSM
20595]
Length = 464
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 86/288 (29%), Positives = 151/288 (52%), Gaps = 10/288 (3%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ E D + + + I + IVPN H PR F+ E L +L SI+ G++Q
Sbjct: 164 LTEELAVRDDSLELQQIPGATFGEIELDLIVPNMHQPRQVFDEEDLAELADSIREVGVLQ 223
Query: 78 PLIVRA-------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
P+++R Y++I GERR+RA+++A + VP I+R+ D L A++EN+
Sbjct: 224 PIVIRPLVTPLVDKPEARYELIMGERRWRASRLAGNTTVPAIVRHTDTGDMLRDALLENL 283
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
R LN LEEA Y+QL+ ++ TQ ++ + +SR ++N LR+LKLP V+ +
Sbjct: 284 HRSQLNALEEAAAYQQLMEDFKCTQEELSRRIARSRPQISNTLRLLKLPPLVQRRVAAGV 343
Query: 191 ISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GHAR L+ +D ++ AQ IV++ +SVR EELV + ++ + + + +
Sbjct: 344 LSAGHARALLGLADAAAMERLAQRIVAENLSVRTVEELVALGEEGTPEKPHRTKRAGQFQ 403
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
L L ++ + + + KG+ I + + + L I +++ E
Sbjct: 404 PELNGLATRLMDRFETKVKVVMGQKKGRISIDFGSIDDLNRILTMINE 451
>gi|315650206|ref|ZP_07903281.1| stage 0 sporulation protein J [Eubacterium saburreum DSM 3986]
gi|315487563|gb|EFU77871.1| stage 0 sporulation protein J [Eubacterium saburreum DSM 3986]
Length = 310
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 108/311 (34%), Positives = 177/311 (56%), Gaps = 21/311 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVN-------QSIDSPEKKTETIPESQDCISIHSIVPNPHN 53
M+ + LG+G AL+ +N +++D + + + + I + PN +
Sbjct: 1 MAKRMA---LGKGADALLRNINGTNTAIDEAVDKNIEDNTSKKTGELMVKISLVEPNRNQ 57
Query: 54 PRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVII 113
PR F+ + L++L +S+K +G++QP+IV+ I N Y+I+AGERR+RAA+ A LSEVPV++
Sbjct: 58 PRKMFDKDSLDELTKSVKQYGVLQPIIVKKIGNR-YEIVAGERRWRAAQAAGLSEVPVVV 116
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
R+ D++ + EIAI+EN+QR DLNP+EEAL Y+ LI EY TQ ++ V K+RS + N L
Sbjct: 117 RDYDDQKAKEIAIIENIQRTDLNPIEEALAYKSLIEEYNLTQEELSDKVSKNRSTITNSL 176
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQD 230
R+LKL ++++ + +IS GHAR L+S D A I+ + +SVRDTE+ +
Sbjct: 177 RLLKLSKNIQQYMIDGKISSGHARALLSLEDEGKRELLALDIMKRSLSVRDTEKAAKTLS 236
Query: 231 NKKEKRKKIFEGSREKEK------YLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETN 283
KK S +++ + + E I +G + I + NKG+ I+Y +
Sbjct: 237 KKKNVELDELTESVKEDTVRDLSLFYKEYEDSIQGVLGTKVHINQKDKNKGRIEIEYYSQ 296
Query: 284 EQLKIICSLLG 294
+L I +
Sbjct: 297 VELDRIMDIFK 307
>gi|163803605|ref|ZP_02197471.1| ParB family protein [Vibrio sp. AND4]
gi|159172599|gb|EDP57457.1| ParB family protein [Vibrio sp. AND4]
Length = 293
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 93/296 (31%), Positives = 173/296 (58%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSID----SPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + ++I + P + PR S
Sbjct: 1 MSKRGLGKGLDALLSTSSLAREKQHIASHSQALSADGELTDLAIGQLQPGVYQPRKDMAS 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G ++IIAGERR+RAAK A L VP +++ V++++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRQVAGGQFEIIAGERRWRAAKQAGLKRVPCLVKKVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQDEFTLTHQQVADVIGKSRTTVSNLLRLNQLEV 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++++ +++ +GHAR L + + +AQ + +K+M+VR TE+LV+ +
Sbjct: 181 DVKDLVANKKLEMGHARALLALEGEQQVDVAQQVANKQMTVRQTEQLVKR-----CLAPQ 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +++++ + K+S + +S ++ N K + I + +L + + L
Sbjct: 236 NEQKAQQEDTEAEQMSHKLSQLLDAKVSLVRSANGKAKVTISLDEPHKLNQLIAKL 291
>gi|156972765|ref|YP_001443672.1| chromosome partitioning protein [Vibrio harveyi ATCC BAA-1116]
gi|156524359|gb|ABU69445.1| hypothetical protein VIBHAR_00430 [Vibrio harveyi ATCC BAA-1116]
Length = 293
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 92/296 (31%), Positives = 171/296 (57%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSID----SPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + ++I + P + PR
Sbjct: 1 MSKRGLGKGLDALLSTSSLAREKQHIASHSQALSADGELTDLAIGQLQPGVYQPRKDMAP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G ++IIAGERR+RAAK A L VP +++ V++++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRQVAGGQFEIIAGERRWRAAKQAGLKRVPCLVKKVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQDEFTLTHQQVADVIGKSRTTVSNLLRLNQLEI 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR L + + +AQ + K+M+VR TE+LV++ +
Sbjct: 181 DVKGLVADKKLEMGHARALLALEGEQQVEVAQQVAKKQMTVRQTEQLVKK-----CLAPQ 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLL 293
+ +++++ + K+S + +S ++ N K + I + +L + + L
Sbjct: 236 NEQKAQQEDTEAEQMSHKLSQLLDAKVSLVRSANGKAKVTISLDEPHKLNQLIAKL 291
>gi|222098956|ref|YP_002533014.1| stage 0 sporulation protein j [Bacillus cereus Q1]
gi|221243015|gb|ACM15725.1| stage 0 sporulation protein J [Bacillus cereus Q1]
Length = 273
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 100/268 (37%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I+I + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEITITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP---LSLAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H RTL++ D SL +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEELLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + + K + +E+ + + E + K G + IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQRVSRETKQVK--KERNIFFVERETFLREKFGTEVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLAQQN 273
>gi|121608055|ref|YP_995862.1| parB-like partition proteins [Verminephrobacter eiseniae EF01-2]
gi|121552695|gb|ABM56844.1| chromosome segregation DNA-binding protein [Verminephrobacter
eiseniae EF01-2]
Length = 303
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 93/302 (30%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+G E + + IVP + PR + L
Sbjct: 4 KKPKGLGRGLEALLG-----PKVAELAQAADAGLPGALPLDEIVPGMYQPRTRMDEGALY 58
Query: 65 DLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+L +SIK GI+QP++VR + G Y+IIAGERRFRAA++A L+ VPV++R+V ++S
Sbjct: 59 ELAESIKVQGILQPILVRRLSAGQNAGKYEIIAGERRFRAARLAGLATVPVLVRDVPDES 118
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G ++L+ E+G T VG+SRS +N+LR+L L
Sbjct: 119 AAAMALIENIQREDLNPLEEAQGLQRLVKEFGLTHELAAQAVGRSRSAASNLLRLLNLAE 178
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V+ M+ +I +GHAR L++ + + + + E
Sbjct: 179 PVQTMLMAGDIDMGHARALLALERAAQITAGNQIAAKKLSVRQAEALVRKIGAESSPARP 238
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNN---------KGQFCIKYETNEQLKIICS 291
+ +EK L +E+++S + + ++ + G+ I++ + E L +
Sbjct: 239 KPRKEKSPDLRRVEEELSDLLMAEVQVRVKKRVKRNARVEEMGELAIRFGSLEALNGLIE 298
Query: 292 LL 293
L
Sbjct: 299 RL 300
>gi|325965288|ref|YP_004243194.1| ParB-like partition protein [Arthrobacter phenanthrenivorans Sphe3]
gi|323471375|gb|ADX75060.1| ParB-like partition protein [Arthrobacter phenanthrenivorans Sphe3]
Length = 430
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 92/286 (32%), Positives = 151/286 (52%), Gaps = 8/286 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E DS + + I + I PN PR+ F+ + + +L S++ G++QP+
Sbjct: 145 EEPARPDSGVELVDVPGAHFAEIPVADIHPNRKQPRSVFDEDDMAELVHSVREIGVLQPI 204
Query: 80 IVRA---IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
+VR + Y+++ GERR+RA + A L +P I+R+ + L A++EN+ R LN
Sbjct: 205 VVRKSTEDGSEPYELVMGERRWRAVQAAGLETIPAIVRDTTDDDLLRDALLENLHRSQLN 264
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
PLEEA Y+QL+ ++G T + +G+SR V+N LR+LKLP V+ + +S GHA
Sbjct: 265 PLEEAAAYQQLLEDFGTTHEQLADRIGRSRPQVSNTLRLLKLPPLVQRRVAAGVLSAGHA 324
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
R L++ D ++ AQ IV++ MSVR TEE V + + K + + L L
Sbjct: 325 RALLALPDAAAMERLAQRIVAEGMSVRATEEAVTLYQDPAKPAKNNIPRPGARHERLDYL 384
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL--GEND 297
+S ++ N+ I KG+ I++ + E L I +L G N+
Sbjct: 385 ASSLSDRLDTNVKISLGVRKGKVSIEFASVEDLNRIMDVLAPGSNN 430
Score = 40.8 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP 36
MS +R LGRGL ALI + S T + P
Sbjct: 1 MSE--KRRGLGRGLGALIPSSAAANGSGNAPTVSRP 34
>gi|268610515|ref|ZP_06144242.1| transcriptional regulator [Ruminococcus flavefaciens FD-1]
Length = 281
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 98/293 (33%), Positives = 157/293 (53%), Gaps = 12/293 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LG GL L + + + + I PN PR F E ++
Sbjct: 1 MGKSSLGSGLDFLFSDNTSEVQVKK-----------TLRTSEIEPNRDQPRKVFSDEAIQ 49
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L SI+ HG++QP++VR I G Y+I+AGERR+RAA+M L EVPV IR + + +++I
Sbjct: 50 ALADSIREHGMLQPILVRPIGGG-YQIVAGERRWRAARMLGLDEVPVNIRELSDLETMQI 108
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
AI+EN+QR++LNP+EEA GY LI +YG TQ + +VG+SRS VAN +RIL LP V +
Sbjct: 109 AIIENLQRENLNPVEEAAGYNDLIEKYGMTQEKVAKMVGRSRSAVANAVRILALPERVLK 168
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
M+ +IS GHAR L+ + L + ++ + E+ K+ ++
Sbjct: 169 MVENGDISAGHARALLGFENEEMLIATALKAADGGLTVRQVEKAAQRSTEEEKETPPSNK 228
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ + Y ++E + K+G + + + NKG +++ E L + L +++
Sbjct: 229 KIDNYFVEMELSLHEKLGRKVKVDYGKNKGALILEFYDKEDLAALAEKLAKDE 281
>gi|291561691|emb|CBL40490.1| ParB-like partition proteins [butyrate-producing bacterium SS3/4]
Length = 375
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 107/277 (38%), Positives = 164/277 (59%), Gaps = 13/277 (4%)
Query: 29 EKKTETIPESQDCISIHS------IVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
EK E E I I PN PR F+ E L++L SIK +GI+QPLIV+
Sbjct: 99 EKIVEKPVEKIVEKPIEQTLKLNLIEPNSEQPRKNFDEESLQELADSIKQYGILQPLIVQ 158
Query: 83 AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
Y+IIAGERR+RAAK+A +++VPV+IR D + ++EIA++ENVQR DLNP+EEA
Sbjct: 159 KKG-NHYEIIAGERRWRAAKLAGVTDVPVLIREYDKQQTMEIALIENVQRADLNPIEEAQ 217
Query: 143 GYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV-- 200
++QLI E+ TQ +I + V K+R+ + N +R+LKL V++M+ + +IS GHAR L+
Sbjct: 218 AFQQLIQEFHLTQEEIANRVSKNRATITNSMRLLKLDIRVQDMLAEGKISSGHARALLGL 277
Query: 201 -STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS 259
+A I+ +K+SVRD E+LV+ + ++K E + + +E K+ S
Sbjct: 278 EEGERQYQVAAKIIEEKLSVRDVEKLVKMMNR--PPKEKKPEKGPDIDLIYRQVEDKLKS 335
Query: 260 KVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGE 295
+G + I + NKG+ I+Y + E+L + L+
Sbjct: 336 IMGTKVVINQKDKNKGRIEIEYYSQEELDRLIELMES 372
Score = 35.8 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHS 46
+KR LG+GL A GE + + + E + + ++
Sbjct: 1 MAKRGLGKGLGAFFGEEVTTTKENAAEKVSRSERKGHLMVNQ 42
>gi|229199697|ref|ZP_04326340.1| Stage 0 sporulation protein J [Bacillus cereus m1293]
gi|228583792|gb|EEK41967.1| Stage 0 sporulation protein J [Bacillus cereus m1293]
Length = 273
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 99/268 (36%), Positives = 161/268 (60%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I+I + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEITITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H RTL++ D L +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + + K + +E+ + + E + K G + IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQRVSRETKQVK--KERNIFFVERETFLREKFGTEVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLAQQN 273
>gi|284049391|ref|YP_003399730.1| parB-like partition protein [Acidaminococcus fermentans DSM 20731]
gi|283953612|gb|ADB48415.1| parB-like partition protein [Acidaminococcus fermentans DSM 20731]
Length = 339
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 165/320 (51%), Gaps = 33/320 (10%)
Query: 6 SKRRLGR-GLAALIGEVNQSIDSPEK---KTETIPESQDCISIHSIVPNPHNPRNYFESE 61
K LG GL + G + + + E+ +++ ++ PNP+ PR F+ E
Sbjct: 4 KKGGLGMTGLDKMFGGRKPKGAPAARTAVEEKQAGEAVGEVTVKNLKPNPYQPRKTFDPE 63
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L +L +SI+ G+IQPLIVR Y+I+AGERR+RAAK A L++VPV++R+ D +
Sbjct: 64 ALRELEESIRQSGVIQPLIVRKKG-RQYEIVAGERRWRAAKAAGLTKVPVVVRDYDEDAM 122
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A+VEN+QR DL+P+EEA G +QL+ G TQ + +GKSR+ VAN LR+LKLP+
Sbjct: 123 MEVALVENMQRSDLDPMEEARGIQQLMETLGLTQEEAARKLGKSRAAVANALRLLKLPAE 182
Query: 182 VREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQD-------- 230
V E++ ++S G R L+ + LA+ S R EE+ + +
Sbjct: 183 VAELVSAGKLSPGQVRPLLGLDTPEKINELARKAAEGGWSARIVEEVAKAEKAGKPWHLY 242
Query: 231 ---------------NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI--KHRNNK 273
K+ K G++ ++ ++K+ +G + I ++
Sbjct: 243 LKTEEELLPPEKTPGKKERKAPSSQNGTKAQDPDTRAFQEKLIQYLGTRVKIEPSQKDQG 302
Query: 274 GQFCIKYETNEQLKIICSLL 293
G+ I+Y E L+ + LL
Sbjct: 303 GRILIEYYGPEDLERLYELL 322
>gi|297569960|ref|YP_003691304.1| parB-like partition protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925875|gb|ADH86685.1| parB-like partition protein [Desulfurivibrio alkaliphilus AHT2]
Length = 291
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 108/299 (36%), Positives = 160/299 (53%), Gaps = 16/299 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LG+GL AL+ ++ P + +IVPNPH PR + L
Sbjct: 2 VKRNPLGKGLGALLPSHDEDGKRP----------YLVCPLQAIVPNPHQPRKKVDDGALA 51
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L +SI+ G++ PL+VR +D+ Y+IIAGERR+RAA +A L+EVPV+I++V + LE+
Sbjct: 52 QLAESIREKGVLLPLVVRRLDDERYEIIAGERRWRAAGLAGLAEVPVLIKDVSPQDQLEL 111
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLNPLEEA Y +L+ EYG TQ ++ VGK RS VAN LRI +LP ++
Sbjct: 112 ALVENIQRQDLNPLEEAEAYLRLVQEYGLTQEEVARRVGKERSTVANALRINQLPDFAKD 171
Query: 185 MIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ E IS+GHAR L L I+SK +SVR EE + + +
Sbjct: 172 DLAAERISMGHARVLLGLQDEQQMRQLRDEIISKGLSVRQAEEAARRRKKRSSAGGGKSN 231
Query: 242 GSRE---KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
S E Y L ++ + I +G+ I+Y + + L+ + LL +
Sbjct: 232 RSSSHGLPESYCRALAAELGRNYDTRVKIVQNGKRGKLEIEYYSPDDLERLIGLLQPDS 290
>gi|229176155|ref|ZP_04303647.1| Stage 0 sporulation protein J [Bacillus cereus MM3]
gi|228607314|gb|EEK64644.1| Stage 0 sporulation protein J [Bacillus cereus MM3]
Length = 273
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 98/268 (36%), Positives = 159/268 (59%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I I + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEEAIQEIVITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H R T+ SL +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + + K + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQRVSRETKQVK--KERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLAQKN 273
>gi|228988707|ref|ZP_04148792.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229159039|ref|ZP_04287095.1| Stage 0 sporulation protein J [Bacillus cereus ATCC 4342]
gi|228624458|gb|EEK81229.1| Stage 0 sporulation protein J [Bacillus cereus ATCC 4342]
gi|228771019|gb|EEM19500.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 273
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 99/268 (36%), Positives = 161/268 (60%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I+I + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEITITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H RTL++ D L +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQSVSRETKQVK--KERNIFFIERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLAQKN 273
>gi|320335879|ref|YP_004172590.1| parB-like partition protein [Deinococcus maricopensis DSM 21211]
gi|319757168|gb|ADV68925.1| parB-like partition protein [Deinococcus maricopensis DSM 21211]
Length = 283
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 97/298 (32%), Positives = 153/298 (51%), Gaps = 16/298 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS + LGRGL AL+ K + + + IV + PR F+
Sbjct: 1 MS---KRSSLGRGLDALL---------ARKDVAVSGAAPQTLKLSQIVQAGYQPRQVFDP 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L QSI+ G++QPL+VR + ++I+AGERR+RAA +A LSEVPV+IR++ ++
Sbjct: 49 EALAELAQSIRDKGVLQPLLVRPKGDA-FEIVAGERRWRAAGLAGLSEVPVVIRDLGDRE 107
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIAI+EN+QR+DL PLEEA Y+ L+ + Q + VGK RS +AN LR+L L
Sbjct: 108 ALEIAIIENLQREDLGPLEEARAYQALMDQGL-NQEGVAQAVGKGRSTIANALRLLTLSD 166
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ + + EIS GHAR +++ + + + E +D +
Sbjct: 167 AAQRALEHGEISAGHARAILAQPEQDRAWALEQIMTRGLNVREAEALRRDRADATPARTP 226
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
+ + E +S +G + I +KG+ + Y + E+L + +LLG D
Sbjct: 227 SKVEGPRPW-REWELNLSRSIGTRVRIT-GEDKGKIELSYASQEELSRLLALLGPQDE 282
>gi|326386153|ref|ZP_08207777.1| chromosome segregation DNA-binding protein [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209378|gb|EGD60171.1| chromosome segregation DNA-binding protein [Novosphingobium
nitrogenifigens DSM 19370]
Length = 333
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 102/277 (36%), Positives = 160/277 (57%), Gaps = 4/277 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
S D + + I P+P PR +F+ L++L QSI + G+IQP++
Sbjct: 52 SAPSPDGGVVIVGRADSGLMLLPVAQIEPHPEQPRRHFDEAALDELAQSIAARGVIQPVV 111
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR I Y+++AGERR+RA++ A + E+P I+R +D +A++EN+QR+DLNP+EE
Sbjct: 112 VRPIGPNRYQLVAGERRWRASQRARVHEIPAIVRQLDETEVTALALIENLQREDLNPVEE 171
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y++L G TQ +I + V KSRSHVANI+R+L LP V MI +EE+S+GHAR L
Sbjct: 172 ARAYQRLSERDGLTQQEIANFVDKSRSHVANIMRLLGLPEEVLVMIEREELSMGHARALA 231
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK--EKYLTDLEKKIS 258
+ DP+ A+ +V+K +SVR+TE+L + + + + R + +E +
Sbjct: 232 TLPDPVEAAREVVAKGLSVRETEKLAKRVNRPESSGPRKARAERSPGESADIAAVEAHVE 291
Query: 259 SKVGLNISIKHRN--NKGQFCIKYETNEQLKIICSLL 293
+GL ++I G I+Y+T +QL +IC L
Sbjct: 292 EFLGLKVTISADADPRTGTVTIRYKTLDQLDLICQRL 328
>gi|284993432|ref|YP_003411987.1| parB-like partition protein [Geodermatophilus obscurus DSM 43160]
gi|284066678|gb|ADB77616.1| parB-like partition protein [Geodermatophilus obscurus DSM 43160]
Length = 347
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 104/341 (30%), Positives = 156/341 (45%), Gaps = 53/341 (15%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTET-------------------------- 34
MS + LGRGLAALI + P
Sbjct: 1 MS---KRGGLGRGLAALIPTSAPDDEQPTLPGAETEPAGQGAGADAAPAAPAGPPVHLLP 57
Query: 35 -------------------IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
+++ +VPNP PR F+ E LE+L S++ G+
Sbjct: 58 PAAQAAATVAAQAEAAVGVPGAQLREVAVVDVVPNPKQPRQVFDDEALEELTYSVREFGL 117
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
+QP++VR G Y++I GERR RAA+ A L VP IIR+ + + L A++EN+ R L
Sbjct: 118 LQPIVVRERAEGGYELIMGERRLRAARAADLKFVPAIIRDTTDDALLRDALLENIHRVQL 177
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
NPLEEA Y+QL+ E+G T ++ +G+SRS V N +R+LKLP V+ + IS GH
Sbjct: 178 NPLEEAAAYQQLLEEFGATHEELAGKIGRSRSQVTNTIRLLKLPVKVQTRVAAGIISAGH 237
Query: 196 ART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
AR L +LA IV++ MSVR TEE V E+ + + D
Sbjct: 238 ARALLGLPDAGKQEALAARIVAEGMSVRATEEAV--ALAVAEEPAAKRRPRKFNAPGVED 295
Query: 253 LEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
L ++S + I+ KG+ +++ + + L+ I +
Sbjct: 296 LAGRLSDTFETKVKIQIGRAKGRIVVEFGSVDDLQRIIGQM 336
>gi|332296648|ref|YP_004438571.1| parB-like partition protein [Thermodesulfobium narugense DSM 14796]
gi|332179751|gb|AEE15440.1| parB-like partition protein [Thermodesulfobium narugense DSM 14796]
Length = 299
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 166/304 (54%), Gaps = 28/304 (9%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SKR +GRGL AL+G+ + + IS+ I+PNP+ PR F+ E +
Sbjct: 1 MSKRGMGRGLDALLGD------------DKSDKILKLISLEKILPNPYQPRKGFDEESIL 48
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L +SIK HG++QP++VR Y++I+GERR +A + +SE+P I++ V ++ +
Sbjct: 49 KLSESIKEHGVLQPIVVREKGQL-YELISGERRVKACERIGISEIPAIVKEVTDEQMAIL 107
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR++L+ ++EA Y +L ++ T +I + VGKSRS+V N +R+L+LP V +
Sbjct: 108 ALVENLQRENLSAIDEARAYVELQDKFSMTHEEIANSVGKSRSYVTNTIRLLQLPDEVIK 167
Query: 185 MIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
I +S H R +L + L+ A+ IV + V+ EEL E + K+ K + +
Sbjct: 168 YIENNTLSPAHGRVLLSLKDEIEILNFARRIVKDGIPVKVAEELKLEFISNKDSIKGLSK 227
Query: 242 GSREK------------EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
+ K ++ L +E +IS K+ + I N G+F I++ + E+L +
Sbjct: 228 SIKSKSRPLKSQKEVKQDEELKFIEIEISKKLKTPVHISFSGNVGRFVIEFYSKEELDSL 287
Query: 290 CSLL 293
+
Sbjct: 288 VEKI 291
>gi|170016609|ref|YP_001727528.1| transcriptional regulator [Leuconostoc citreum KM20]
gi|169803466|gb|ACA82084.1| Predicted transcriptional regulator [Leuconostoc citreum KM20]
Length = 300
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 157/279 (56%), Gaps = 9/279 (3%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E K T E + ++++ I NP PR+ F+ L++L SI+ +G++ P+
Sbjct: 23 EETLEHTKQATKKITEFERVERLNLNRITANPFQPRHRFDEGKLQELADSIRENGVLTPI 82
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
IVR N ++IIAGERR RA+K+A + + I+R+VD+ + +A++EN+QR +L+ +E
Sbjct: 83 IVRRFGND-FQIIAGERRVRASKLAKQATISAIVRDVDDNTMAAVALIENLQRDNLDAIE 141
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART- 198
EA Y L+S+ TQ + VGK R+ VAN +R+LKLP +V++M++ +S+G AR
Sbjct: 142 EAQAYSGLMSQLKLTQAQVAQKVGKERTTVANAVRLLKLPEAVQDMVQSGLLSMGQARAL 201
Query: 199 --LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
L ++ LAQ +VS++++VR E LV++ + + + + Y+ L +
Sbjct: 202 LGLKVKANIEELAQTVVSRQLTVRQVEVLVKQINEGPVE----KQPATPTSPYIRALATQ 257
Query: 257 ISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+ + G + + +G+ I Y +N+ L I +LL
Sbjct: 258 LEERFGTKVKVNATEKGRGKIEINYLSNDDLSRILALLN 296
>gi|325265959|ref|ZP_08132645.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Kingella
denitrificans ATCC 33394]
gi|324982597|gb|EGC18223.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Kingella
denitrificans ATCC 33394]
Length = 300
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 94/294 (31%), Positives = 165/294 (56%), Gaps = 16/294 (5%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+ +K L RGL AL+G + + S + I I I + R + E
Sbjct: 14 TSKNKTGLKRGLDALMGSSHVDVGS--------GDQLRQIPIQKIQTGRYQARVQMQDEA 65
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L +L +SIK+ GIIQP+IVR Y++IAGERR+RAA++A L+E+P +++ ++K+ +
Sbjct: 66 LYELAESIKAQGIIQPVIVREYGLDSYELIAGERRWRAAQLAGLTELPAVVKQANDKTVM 125
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
+ ++EN+QR++LNP+EEA G +LI E+ T + VG+SRS ++N LR+LKLP V
Sbjct: 126 AMGLIENIQRENLNPIEEAQGLRRLIDEFELTHETVAEAVGRSRSAISNSLRLLKLPEPV 185
Query: 183 REMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+E++ + + +GHAR L++ LAQ V SVR+TE ++ ++ K
Sbjct: 186 QELLFQRHLEMGHARALINLPVNEQLDLAQKAVKNGWSVRETERR-----SQLTQQGKNV 240
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + + + + L + ++ +G++ IK R KG+ + +++ + + L
Sbjct: 241 KPTAKIDPDVARLAETLTEALGVSAEIKTRDRKKGKIVLHFDSADTFAALMKRL 294
>gi|86147162|ref|ZP_01065478.1| ParB family protein [Vibrio sp. MED222]
gi|85835046|gb|EAQ53188.1| ParB family protein [Vibrio sp. MED222]
Length = 293
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 92/296 (31%), Positives = 173/296 (58%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + +++ + P + PR
Sbjct: 1 MSKRGLGKGLDALLATSSLAREKQQVASYSQALSADGELIELAVGCLKPGVYQPRKDIAP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + + ++IIAGERR+RAA+ A L +VP +I+ V++K+
Sbjct: 61 EALEELAASIQSQGIIQPIVVRPLAHDQFEIIAGERRWRAARQAGLKQVPCLIKRVEDKA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V+N+LR+ +L +
Sbjct: 121 AIAMALIENIQREDLNAIEEAQALERLQNEFELTHQQVAEVIGKSRATVSNLLRLNQLEN 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ + + +GHAR L + + A +KKM+VR TE+LV++
Sbjct: 181 EVKSLVSNKHLEMGHARALLALEGDTQVEAANTAATKKMTVRQTEQLVKKCLKPD----- 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ S++++ +L ++++ K+ N+S+ + K + I + +L + + L
Sbjct: 236 VESESKQEDTEAIELSRRLTEKLQANVSVTRSVSGKSKVTITLDEPHKLDQLIAKL 291
>gi|294085216|ref|YP_003551976.1| parB-like partition protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664791|gb|ADE39892.1| parB-like partition protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 361
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 103/329 (31%), Positives = 165/329 (50%), Gaps = 42/329 (12%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPE------------------------------ 37
R LGRGL++L+G+ + + T
Sbjct: 31 RGLGRGLSSLLGDAGIAAATTNANPNTASGVATPPEMATSPLSADAKATKAGIASGVTGN 90
Query: 38 ---SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKII 92
I + I P PR F+ L +L +SI+ GI+QP++VR + Y++I
Sbjct: 91 ITAGVIDIPVEWINSGPWQPRLKFDKTALAELAESIRQKGIMQPVLVRQSADNPQRYQLI 150
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR+RAA++A L VP I+R++ + + E+A++ENVQR DL +EEALGY+ LIS++
Sbjct: 151 AGERRWRAAQLAQLHTVPAILRDISDVEAYELALIENVQRTDLTVIEEALGYQNLISKHK 210
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI 212
Y Q + ++GKSRSH+AN+LR+L LPS V M+ ++++G R L+ D +LA+ I
Sbjct: 211 YKQEQLSELIGKSRSHIANLLRLLSLPSDVMTMVADGQLTMGQVRPLIGHEDASALAEEI 270
Query: 213 VSKKMSVRDTEELVQE-----QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVG--LNI 265
+SK +S R E LV+ + ++ K + EK + LE + + ++G + +
Sbjct: 271 ISKNLSARQVEALVKRRGETDTTSGQDDHGKAGSTASEKSTDILALEARAAEQLGLAMTV 330
Query: 266 SIKHRNNKGQFCIKYETNEQLKIICSLLG 294
G+ E Q+ I LG
Sbjct: 331 DWDASKASGKLVFHCEDFAQITFILEQLG 359
>gi|261368854|ref|ZP_05981737.1| spoOJ protein [Subdoligranulum variabile DSM 15176]
gi|282569040|gb|EFB74575.1| spoOJ protein [Subdoligranulum variabile DSM 15176]
Length = 294
Score = 129 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 165/302 (54%), Gaps = 16/302 (5%)
Query: 5 YSKR---RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+KR LG+GL +L ++ +T+ + + I P+P PR F+ +
Sbjct: 1 MAKRKLGGLGKGLDSLFADLP--------ETDADSAGVTTLPLREIEPDPDQPRKKFDDD 52
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYK-IIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L L SI +G++QP+ VR G IIAGERR+RAA++A L EVPV+I++V ++
Sbjct: 53 ALAGLAASITENGLLQPIAVRPKRIGTGYLIIAGERRWRAARLAGLDEVPVLIKDVTDEQ 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DL+P+E A G QLI +YG TQ +GKSRS V N LR+L LP
Sbjct: 113 AAALALIENLQREDLDPIEVAEGCRQLIEKYGLTQETAAKRLGKSRSAVTNSLRLLALPQ 172
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
VR + +S GHA+ L S + AQ I+ K ++VR TE L ++ + K
Sbjct: 173 EVRAQVSAGTLSFGHAKVLLGLPSEELIRTAAQEIIDKGLNVRQTEALCKKLAKPPKPPK 232
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ ++ + ++E + G + + +++ KG I + ++E L+ SLLG+ D
Sbjct: 233 PKPDPFTRPKRAV-EVEAALKEVTGSEVHVDYKDGKGSLKIDFYSDEMLQKFVSLLGQYD 291
Query: 298 FE 299
E
Sbjct: 292 PE 293
>gi|218711031|ref|YP_002418652.1| ParB family protein [Vibrio splendidus LGP32]
gi|218324050|emb|CAV20412.1| ParB family protein [Vibrio splendidus LGP32]
Length = 293
Score = 129 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 92/296 (31%), Positives = 173/296 (58%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + +++ + P + PR
Sbjct: 1 MSKRGLGKGLDALLATSSLAREKQQVASYSQALSADGELIELAVGCLKPGVYQPRKDIAP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + + ++IIAGERR+RAA+ A L +VP +I+ V++K+
Sbjct: 61 EALEELAASIQSQGIIQPIVVRPLAHDQFEIIAGERRWRAARQAGLKQVPCLIKRVEDKA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V+N+LR+ +L +
Sbjct: 121 AIAMALIENIQREDLNAIEEAQALERLQNEFELTHQQVAEVIGKSRATVSNLLRLNQLEN 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ + + +GHAR L + + A +KKM+VR TE+LV++
Sbjct: 181 EVKGLVSNKHLEMGHARALLALEGDTQVEAANTAATKKMTVRQTEQLVKKCLKPD----- 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ S++++ +L ++++ K+ N+S+ + K + I + +L + + L
Sbjct: 236 VESESKQEDTEAIELSRRLTEKLQANVSVTRSVSGKSKVTITLDEPHKLDQLIAKL 291
>gi|218283290|ref|ZP_03489345.1| hypothetical protein EUBIFOR_01934 [Eubacterium biforme DSM 3989]
gi|218215980|gb|EEC89518.1| hypothetical protein EUBIFOR_01934 [Eubacterium biforme DSM 3989]
Length = 292
Score = 129 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 105/292 (35%), Positives = 166/292 (56%), Gaps = 16/292 (5%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSI--DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+N + RLG+GL+++ G+ + D E + Q I ++ I PNP+ PR F
Sbjct: 2 DNKNNARLGKGLSSIFGQDVSKVLDDIQNGDMEVESQQQSKIPVNEIRPNPYQPRKVFND 61
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK HG+ P++V Y +IAGERR RA+K+A L +P II + D++
Sbjct: 62 EALKELSSSIKQHGVFTPILV-KKSIQGYDLIAGERRLRASKLAGLENIPAIIVDFDDQE 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+EIA++EN+QR+DLN +EEA YE+LI GYTQ + VGKSR H+ N+LR+LKLP
Sbjct: 121 MMEIALLENIQREDLNVIEEAKAYEKLIQRLGYTQEQLAHRVGKSREHITNLLRLLKLPE 180
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+E + +++S+GH R L + S +A+ + + +SVR E++V++ +N
Sbjct: 181 DVQEYVVNKQLSMGHVRALLGLKTESSMRKIAKQAIDQGLSVRKVEQIVKDTNN------ 234
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
K +++ Y+ ++K+ ++SI K I YE E L I
Sbjct: 235 KKTVEKPKEDIYVKAAKEKLQEFFQTSVSIS----KNSISIHYENKEDLNRI 282
>gi|229099906|ref|ZP_04230829.1| Stage 0 sporulation protein J [Bacillus cereus Rock3-29]
gi|229118969|ref|ZP_04248314.1| Stage 0 sporulation protein J [Bacillus cereus Rock1-3]
gi|228664494|gb|EEL19990.1| Stage 0 sporulation protein J [Bacillus cereus Rock1-3]
gi|228683521|gb|EEL37476.1| Stage 0 sporulation protein J [Bacillus cereus Rock3-29]
Length = 273
Score = 129 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 97/268 (36%), Positives = 156/268 (58%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I + + PNP+ PR +F +E+L SIK HGI+QPLI R Y+I+A
Sbjct: 9 KEEETIQEIIVTELRPNPYQPRKHFNKAAIEELAASIKEHGILQPLIARK-SIKGYEIVA 67
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 68 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H R T+ SL +
Sbjct: 128 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 187
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 188 RIEKEGLNVRQLEKIVQEINQHVSRETKQVK--KERNIFFVERETFLREKFGTDVKIKET 245
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL +
Sbjct: 246 KKEKGKIEIEFFNKEDLNRILELLSHKN 273
>gi|24217045|ref|NP_714526.1| ParB-like protein [Leptospira interrogans serovar Lai str. 56601]
gi|45659301|ref|YP_003387.1| hypothetical protein LIC13488 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24198456|gb|AAN51544.1| ParB-like protein [Leptospira interrogans serovar Lai str. 56601]
gi|45602547|gb|AAS72024.1| ParB [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
Length = 291
Score = 129 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 107/294 (36%), Positives = 164/294 (55%), Gaps = 12/294 (4%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
+ LGRGL LI +S + + I I I PNP PR F E L++
Sbjct: 4 KPKALGRGLGNLIP----VNESKTPIDSSSEGALREIKISEIRPNPGQPRKTFSEESLKE 59
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L ++IK+HG+IQP++V+ +D+G Y+II+GERR+RA K+A ++P I++NV S+E+A
Sbjct: 60 LSETIKAHGVIQPIVVKQLDSG-YEIISGERRYRACKLAGFIKIPAIVKNVSENQSMEMA 118
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
I+EN+QR+DLNP+EEA+ Y+ L + DI + VGK+RS ++N++R+L+LP V+++
Sbjct: 119 IIENIQREDLNPIEEAIAYKTLSEKLNLKITDISARVGKNRSTISNLIRLLQLPDVVQDL 178
Query: 186 IRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
I+ IS GHAR L LA I K ++ R EELV + +
Sbjct: 179 IKNGRISEGHARPLLSLADRKKIEQLAYQIAEKGLTARQVEELVSNISEGRSSI--PEKK 236
Query: 243 SREKEKYLTDLEKKISSKVGLNISI--KHRNNKGQFCIKYETNEQLKIICSLLG 294
K+ + +LE K K + I I + KG+ I Y E ++ I + LG
Sbjct: 237 RSRKDVNIVELENKFRKKYSMKIEIGHNQNSGKGKMTIVYPNLEAMEKILNALG 290
>gi|241895294|ref|ZP_04782590.1| stage 0 DNA-binding protein [Weissella paramesenteroides ATCC
33313]
gi|241871600|gb|EER75351.1| stage 0 DNA-binding protein [Weissella paramesenteroides ATCC
33313]
Length = 301
Score = 129 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 89/285 (31%), Positives = 155/285 (54%), Gaps = 16/285 (5%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
AL + + + I + +V NP PR F + L++L +SIK +G+
Sbjct: 21 ALFADQGLDTSV------STSDEVREIDVDKMVANPFQPRRVFNQDKLQELAESIKQNGV 74
Query: 76 IQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
+QP+IVR Y+I+AGERR+RA+++A++ +P I+R +D+ L+ AI+EN+QR+
Sbjct: 75 LQPVIVRHNPKNSSQYEILAGERRWRASQIANVETIPAIVRKLDDDQMLQAAILENLQRE 134
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
DL PLEEA Y ++ TQ + +GK+RS VAN LR+L LP V++++ ++S+
Sbjct: 135 DLTPLEEAQAYRDMMDGLHLTQEQVAKRLGKARSAVANFLRLLNLPDEVKDLLNAGQLSM 194
Query: 194 GHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
G ART L + + +A+ +++ M+VR E+LV + + + + + Y+
Sbjct: 195 GQARTLLGLRNKRRIVPVAKRAIAEGMTVRQLEQLVNKLNE----QSTVTKDQPSLSPYI 250
Query: 251 TDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLG 294
+ +K G + + ++R G+ I Y ++E L I LG
Sbjct: 251 KASTTALENKFGTKVHMTRNRKGAGKIEITYLSDEDLNRIFETLG 295
>gi|269958140|ref|YP_003327929.1| parB-like partition protein [Xylanimonas cellulosilytica DSM 15894]
gi|269306821|gb|ACZ32371.1| parB-like partition protein [Xylanimonas cellulosilytica DSM 15894]
Length = 529
Score = 129 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 157/282 (55%), Gaps = 5/282 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
N + + + S + + +I PN PR F+ L++L SIK G++QP++
Sbjct: 242 ANNELMAADDLLPVPGASFAELPVDAIRPNTWQPRTVFDESELDELVDSIKEIGVLQPIV 301
Query: 81 VRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
VR +G Y++I GERR+RA ++A L+ VP IIR D+ L A++EN+ R LNPL
Sbjct: 302 VRPDRSGDGQYELIMGERRWRATQLAGLATVPAIIRETDDSDMLRDALLENLHRAQLNPL 361
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR- 197
EEA Y QL+ ++G T ++ + + +SR ++N LR+LKLP V+ + +S GHAR
Sbjct: 362 EEAAAYRQLLDDFGCTHEELATRIARSRPQISNTLRLLKLPPLVQRRVAAGILSAGHARA 421
Query: 198 --TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+L ++ LAQ IVS+ +SVR TEE+V + E+ K+ + ++ + +L
Sbjct: 422 LLSLSDGAEIERLAQRIVSEGLSVRATEEIVALVTSGGEEAKRRTPRAGQRSVAVDELAG 481
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + ++ +KG+ +++ + E L I +++ D
Sbjct: 482 RLSDLFETRVKVQVGKSKGRMTVEFASVEDLNRILAVMAPQD 523
Score = 39.7 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE 29
MS KR LGRGL ALI + +
Sbjct: 1 MS-AQKKRGLGRGLGALIPSGPEGDRPVD 28
>gi|329944750|ref|ZP_08292829.1| putative stage 0 sporulation protein J [Actinomyces sp. oral taxon
170 str. F0386]
gi|328529886|gb|EGF56776.1| putative stage 0 sporulation protein J [Actinomyces sp. oral taxon
170 str. F0386]
Length = 391
Score = 129 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 86/270 (31%), Positives = 142/270 (52%), Gaps = 9/270 (3%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID-----N 86
I + I PNP PR F+ E + +L SI G++QP++VR + +
Sbjct: 114 VPVPGARFAEIPVELIHPNPRQPRQVFDEEDISELAASIAEVGLLQPIVVRQVPTASGED 173
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
Y++I GERR RA+K A L +P ++R+ D+ L A++EN+ R LNPLEEA Y+Q
Sbjct: 174 PRYELIMGERRLRASKEAGLETIPAVVRDTDDVDLLRDALLENLHRVQLNPLEEAAAYQQ 233
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTS 203
L+ ++ T ++ + +SRS ++N LR++KLP V+ + IS GHAR L + +
Sbjct: 234 LLEDFQCTHAELSERIARSRSQISNTLRLMKLPPLVQRRLAANVISAGHARALLGLPNAA 293
Query: 204 DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
+ LAQ +V++ +SVR TEELV + + + + R + L L ++S
Sbjct: 294 EMERLAQRVVAEGLSVRATEELVALHEEPEPGSDQP-KVLRARSTPLPALSTRLSDAFDT 352
Query: 264 NISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + KG+ I++ ++ L I L
Sbjct: 353 RVKVTRGAKKGRITIEFAGDDDLARIVGAL 382
>gi|38234909|ref|NP_940676.1| putative chromosome partitioning protein [Corynebacterium
diphtheriae NCTC 13129]
gi|38201174|emb|CAE50898.1| Putative chromosome partitioning protein [Corynebacterium
diphtheriae]
Length = 367
Score = 129 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 85/281 (30%), Positives = 145/281 (51%), Gaps = 6/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E +++ E + I + +VPN NPR+ F+ + L +L SIK G++QP+
Sbjct: 84 ESAVRERRTQEQLEEFGATYREIPVGMLVPNEKNPRSVFDEDDLSELVHSIKEFGLLQPI 143
Query: 80 IVRAI---DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
+VR + + Y+II GERR+RA+ A L +P I+R D+ L A++EN+ R LN
Sbjct: 144 VVRRVKESPDERYEIIMGERRWRASSKAGLPTIPAIVRQTDDSDMLRDALLENIHRVQLN 203
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
PLEEA Y+QL+ E+G TQN++ +G+SR + N++R+L LP V+ + +S GHA
Sbjct: 204 PLEEAAAYQQLLEEFGVTQNELADRLGRSRPVITNMIRLLGLPVDVQRKVAAGVLSAGHA 263
Query: 197 RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK---YLTDL 253
R L+ + + ++ + +E + +K REK +LT
Sbjct: 264 RALLGVKAGEDTQAELAQRIIAEGLSVRATEEAVTLLNRGEKPAPKKREKTPTPEFLTHA 323
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+++ + +S+ KG+ +++ E + I LLG
Sbjct: 324 ADRLADDLDTKVSVSMGKRKGKIVVEFGGREDFERIMGLLG 364
>gi|242372647|ref|ZP_04818221.1| stage 0 DNA-binding protein [Staphylococcus epidermidis M23864:W1]
gi|242349702|gb|EES41303.1| stage 0 DNA-binding protein [Staphylococcus epidermidis M23864:W1]
Length = 276
Score = 129 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 90/275 (32%), Positives = 159/275 (57%), Gaps = 4/275 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ + ++ E I+I I PNP+ PR F+ E L+DL +SI+ HGI+QP+++R
Sbjct: 2 TQEEDQRLQLESNEHVQNIAIDLIKPNPYQPRKTFDEEKLQDLAKSIEQHGILQPIVLRK 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G Y ++ GERRFRA+++A L E+P I++ + ++ +E+AI+EN+QR+DLN +EEA
Sbjct: 62 TIQGFYIVV-GERRFRASQIAGLREIPAIVKELSDEDMMELAIIENLQREDLNAIEEAES 120
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---V 200
Y++L+S+ TQ + +GKSR ++AN+LR+L LPS + M+R+ E+S H RTL
Sbjct: 121 YKKLMSDLNITQQQVAQRLGKSRPYIANMLRLLHLPSEIMTMVREGELSGAHGRTLLSLK 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
S + + + + SVR E+ V + + + +K K++ E+++ +
Sbjct: 181 DASKMKKIGKQAIRESWSVRQLEQYVNTYLQNDTVQPESKQSKNKKPKFIQQQERQLKER 240
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
G + I + G+ ++++ E+ K + L E
Sbjct: 241 YGSRVDISTSKHVGKITFEFKSEEEFKRLIQQLNE 275
>gi|269965289|ref|ZP_06179410.1| Probable chromosome-partitioning protein parB [Vibrio alginolyticus
40B]
gi|269830090|gb|EEZ84318.1| Probable chromosome-partitioning protein parB [Vibrio alginolyticus
40B]
Length = 293
Score = 129 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 92/296 (31%), Positives = 171/296 (57%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSID----SPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + ++I + P + PR
Sbjct: 1 MSKRGLGKGLDALLSTSSFAREKQHIASHSQELSADGELTDLAIGQLQPGVYQPRKDMAP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR ++NG ++IIAGERR+RAA+ A L VP +++ V++++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRQVENGQFEIIAGERRWRAARQAGLKRVPCLVKKVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQDEFTLTHQQVADVIGKSRTTVSNLLRLNQLEV 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ +++ +GHAR L + + +AQ + K+M+VR TE+LV++ +
Sbjct: 181 DVKGLVADKKLEMGHARALLALEGEQQVEVAQQVAKKQMTVRQTEQLVKK-----CLAPQ 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ ++++ + K+S + +S+ N K + I + +L + + L
Sbjct: 236 NEQKGQQEDTEAEQMSHKLSQLLDAKVSLTRSANGKAKLTISLDEPHKLDQLIAKL 291
>gi|328956374|ref|YP_004373707.1| parB-like partition protein [Coriobacterium glomerans PW2]
gi|328456698|gb|AEB07892.1| parB-like partition protein [Coriobacterium glomerans PW2]
Length = 288
Score = 129 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 106/296 (35%), Positives = 161/296 (54%), Gaps = 16/296 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M N+ K LG+GL AL+ E + + I +VPNPH PR F
Sbjct: 1 MPNSKRKTGLGKGLNALVDEAQYETGN--------GSGDIAVPIEEVVPNPHQPRTQFHK 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L +L SI+ HG++QPL+VR G Y+IIAGERR++A+K+A L EVPVIIR+VDN+
Sbjct: 53 DELNELSDSIREHGVLQPLLVRKTKKG-YEIIAGERRYQASKLAGLREVPVIIRDVDNEE 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
L +A++EN+QR DLNP+EEA GY+QL+ E TQ + V KSRS + N LR+L LP
Sbjct: 112 MLTLALIENLQRSDLNPIEEARGYQQLLKEGHLTQEALSKAVSKSRSAITNTLRLLDLPV 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V++++ +++ GHAR +++ A+ +V+ +SVR TE L + R
Sbjct: 172 QVQDLLFGGKLTAGHARAILAVPYEDERIRLAEKVVNDGLSVRATETLAPLFSVETASRS 231
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + K N+ +K K + I+++ E+L I + +
Sbjct: 232 PRPLTPHS----FKKAARTLRQKFNTNVRVKTLRGKNKIEIEFKDEEELMRILAQI 283
>gi|320352148|ref|YP_004193487.1| parB-like partition protein [Desulfobulbus propionicus DSM 2032]
gi|320120650|gb|ADW16196.1| parB-like partition protein [Desulfobulbus propionicus DSM 2032]
Length = 292
Score = 129 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 92/300 (30%), Positives = 161/300 (53%), Gaps = 21/300 (7%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LGRG+ AL+ E + + I I PNP+ PR++F+++ L+
Sbjct: 1 MGKNPLGRGVGALLPEDDL----------VAEDKYFMCDIDKISPNPNQPRSHFDADKLQ 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLE 123
L SI+ G+IQPL+V Y ++AGERR RAAK+A EVPV++ + + SLE
Sbjct: 51 QLADSIREKGVIQPLLVVRGGGNRYTLVAGERRLRAAKLAGRDEVPVVVMDEASDNESLE 110
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+A++EN+QR DLNP+EEA+ Y +L+ E+ TQ ++ VG+ RS + N+LR+L+LP ++
Sbjct: 111 LALIENIQRHDLNPIEEAMAYARLMEEFHLTQEEVAKKVGRQRSTITNVLRLLQLPQPLQ 170
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE---QDNKKEKRKKIF 240
+ + + IS GHAR L+ D + I + ++ + + + ++ K
Sbjct: 171 DDVVQGVISEGHARVLLRVKDQPEQLRQIRDRIVNEELSVRAAERLCGKKSQAPATDKTG 230
Query: 241 EGSREKEK-------YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
E + K Y + ++++++ + I + +G+ I+Y +++ L + SLL
Sbjct: 231 EATAPKPPAEELPPAYCAAVVNQLTNQLHTKVRIVQQGKRGKLEIEYYSSDDLDRLTSLL 290
>gi|225620009|ref|YP_002721266.1| stage 0 sporulation protein J [Brachyspira hyodysenteriae WA1]
gi|225214828|gb|ACN83562.1| stage 0 sporulation protein J [Brachyspira hyodysenteriae WA1]
Length = 320
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 164/312 (52%), Gaps = 23/312 (7%)
Query: 1 MSNNYSKRRLG-RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
MS K LG +GL+ALI + I + ++ E I + I NP PR F
Sbjct: 1 MS---RKGGLGGQGLSALIKSADNEIRTAAEEAEK--NGVLEIDVSLIDVNPDQPRKVFN 55
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPV-IIRNVDN 118
E ++ L +SIK +G+I I +G Y+II+GERRFRA K + ++VP +++N+ +
Sbjct: 56 EEEIQGLAESIKENGLI-NPITLREKDGKYQIISGERRFRAFKFLNRNKVPALVLQNIAD 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
LE+ +VEN+QR DLN +E A Y++LI + Q ++ VGKSRS ++N +RIL L
Sbjct: 115 SKMLELTLVENIQRADLNAIEVARSYKKLIYDLNIKQEELALRVGKSRSTISNSMRILDL 174
Query: 179 PSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
+++ +I + +I+ GHAR + ++ A+ I+ K SVR+ E +V+E+ N
Sbjct: 175 SENIQNLILESKITEGHARAILSLSDENEREEFAKEIIEKGYSVRECERIVKERKNNISN 234
Query: 236 R-----------KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETN 283
+ + +K+ + LE + +++ +N K G+ I+Y ++
Sbjct: 235 DLSGSNEENTENQNEAKKENKKDPNIKKLENDLEKIFSTKVNVIDKNGKEGKIVIEYYSS 294
Query: 284 EQLKIICSLLGE 295
+ L I +L +
Sbjct: 295 DDLSRIMDMLEK 306
>gi|228930485|ref|ZP_04093485.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936759|ref|ZP_04099550.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949201|ref|ZP_04111469.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229124982|ref|ZP_04254156.1| Stage 0 sporulation protein J [Bacillus cereus 95/8201]
gi|228658483|gb|EEL14149.1| Stage 0 sporulation protein J [Bacillus cereus 95/8201]
gi|228810484|gb|EEM56837.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228822968|gb|EEM68809.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829204|gb|EEM74841.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 266
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 99/268 (36%), Positives = 160/268 (59%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I I + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 2 KEEETVQEIVITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARK-SIKGYEIVA 60
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 61 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 120
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H RTL++ D L +
Sbjct: 121 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 180
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 181 RIEKEGLNVRQLEKIVQEINQSVSRETKQVK--KERNIFFIERETFLREKFGTDVKIKET 238
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 239 KKEKGKIEIEFFNKEDLNRILELLAQKN 266
>gi|297585583|ref|YP_003701363.1| parB-like partition protein [Bacillus selenitireducens MLS10]
gi|297144040|gb|ADI00798.1| parB-like partition protein [Bacillus selenitireducens MLS10]
Length = 290
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 100/293 (34%), Positives = 163/293 (55%), Gaps = 9/293 (3%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ A + E+ E+ + I I + PNP+ PR +F+ E +++L
Sbjct: 3 KGLGKGIGAFFPDS-------ERYEESDSQGAQNIKIKDLRPNPYQPRKHFDDEAIDELR 55
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI+ HGI+QPL+VR Y+I+ GERR+RAAK A L VP I+R + + +E+A++
Sbjct: 56 QSIEQHGILQPLVVRK-SIKGYEIVVGERRYRAAKAAKLDSVPAIVRELTDDEMMELALI 114
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNPLEEA Y++L+ TQ+ + +GKSR H+AN LR+L+ P V++ ++
Sbjct: 115 ENLQREDLNPLEEAKAYKKLMEHLSLTQDQLSVKLGKSRPHIANYLRLLQAPQIVQQYLQ 174
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK-IFEGSREK 246
+E+IS GHAR L+ + L+ ++ L + E + +G
Sbjct: 175 EEKISTGHARALLGLKEDKKLSPLLQKTIKEQWSVRHLESVIHDMNENVSRETSKGKPAL 234
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
+ YL D E + S G N++IK K + I + ++ L+ I L+ + E
Sbjct: 235 DVYLKDREAFLKSYFGTNVTIKPGKKKSKIEIDFFDDDDLQRILRLMSAEEAE 287
>gi|262392796|ref|YP_003284650.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio sp. Ex25]
gi|262336390|gb|ACY50185.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio sp. Ex25]
Length = 293
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 89/296 (30%), Positives = 167/296 (56%), Gaps = 12/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSID----SPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + + ++I + P + PR
Sbjct: 1 MSKRGLGKGLDALLSTSSFAREKQHIASHSQELSADGELTDLAIGQLQPGVYQPRKDMAP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR +++G ++IIAGERR+RAA+ A L VP +++ V++++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRQVESGQFEIIAGERRWRAARQAGLKRVPCLVKKVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA E+L E+ T + ++GKSR+ V+N+LR+ +L S
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALERLQDEFTLTHQQVAEVIGKSRTTVSNLLRLNQLES 180
Query: 181 SVREMIRKE--EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ + E+ A + + +AQ + K+M+VR TE+LV++ +
Sbjct: 181 DVKSLVADKLLEMGHARALLALQGEKQVEVAQQVAKKQMTVRQTEQLVKK-----CLAPQ 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ ++++ + K+S + +S+ N K + I + +L + + L
Sbjct: 236 NEQKGQQEDTEAEQMSHKLSQLLDAKVSLTRSANGKAKLTISLDEPHKLDQLIAKL 291
>gi|229142228|ref|ZP_04270752.1| Stage 0 sporulation protein J [Bacillus cereus BDRD-ST26]
gi|228641246|gb|EEK97553.1| Stage 0 sporulation protein J [Bacillus cereus BDRD-ST26]
Length = 266
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 99/268 (36%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I+I + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 2 KEEETIQEITITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARK-SIKGYEIVA 60
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 61 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 120
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H RTL++ D L +
Sbjct: 121 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKALLK 180
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + + K + +E+ + + E + K G ++ IK
Sbjct: 181 RIEKEGLNVRQLEKIVQEINQRVSRETKQVK--KERNIFFIERETFLREKFGTDVKIKET 238
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 239 KKEKGKIEIEFFNKEDLNRILELLAQKN 266
>gi|283458987|ref|YP_003363636.1| putative transcriptional regulator [Rothia mucilaginosa DY-18]
gi|283135051|dbj|BAI65816.1| predicted transcriptional regulator [Rothia mucilaginosa DY-18]
Length = 432
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 84/284 (29%), Positives = 148/284 (52%), Gaps = 6/284 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + +++ I PN PR F+ + +E+L S++ G++QP
Sbjct: 146 STPQAASEEHGGLVPVPGAQFAELNVRDIHPNRKQPRTDFDEQDMEELIHSVREIGVLQP 205
Query: 79 LIVRA---IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
++VR Y+++ GERR+RA + A LS +P I+R ++ L A++EN+ R L
Sbjct: 206 IVVRPSRENGAEKYELVMGERRWRATQAAGLSTIPAIVRETEDGDLLRDALLENLHRSQL 265
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
NP+EEA Y+QL+ E+ TQ + +G+SR ++N +R+LKLP+ V+ + +S GH
Sbjct: 266 NPIEEAAAYQQLMEEFDTTQEQLAKRIGRSRPQISNTIRLLKLPALVQRRVAAGILSAGH 325
Query: 196 ARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
AR L + +LAQ IV++ +SVR TEELV E +++ ++ + L
Sbjct: 326 ARALLALTDQAQIETLAQKIVNEGLSVRATEELVNHASGAAEVKERKAPQPQKHRERLDY 385
Query: 253 LEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ + + K+ ++ I KG+ I++ E L I +L +
Sbjct: 386 IAEAFADKLDTSVKISLGARKGKMTIEFANVEDLNRIIRVLDSD 429
Score = 43.5 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCIS 43
M+ +R LGRGL ALI + ++ + E K +
Sbjct: 1 MAE--KRRGLGRGLGALIPQSTKNSGNAEAKASEKTAAVKTAP 41
>gi|73667542|ref|YP_303558.1| chromosome segregation DNA-binding protein [Ehrlichia canis str.
Jake]
gi|72394683|gb|AAZ68960.1| chromosome segregation DNA-binding protein [Ehrlichia canis str.
Jake]
Length = 283
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 111/289 (38%), Positives = 167/289 (57%), Gaps = 11/289 (3%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLG+G+ LIG N I++ I+ + P+ PR F+ L++L
Sbjct: 3 KRLGKGIFELIGNSNLEINNNTSNNINTSNHLTM-PINLLNPSTSQPRKTFDQASLKELA 61
Query: 68 QSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
+SI HGIIQP+I+R + Y+IIAGERR+RA+ +A L VPVI++ + + LE++I
Sbjct: 62 ESISKHGIIQPIIIRKNPHKKGYEIIAGERRWRASILAKLKSVPVIVKEISDSQCLELSI 121
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DL P+EEA Y LI+ + YT D+ SI+GKSRSH+ N++RIL LP S++ M+
Sbjct: 122 IENIQRQDLTPIEEAEAYSNLINTFSYTHEDLASILGKSRSHITNMIRILSLPPSIKSMV 181
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ IS GHAR L++ +P +AQ I+S ++VR TE L++ +
Sbjct: 182 NDKLISFGHARALINIENPEEIAQKIISSNLNVRQTELLIKNLQKPHRNKIL-------- 233
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ T+LE +S + L I IK N+KG IKY +Q I L
Sbjct: 234 -ENFTELENSLSEMLKLKIKIKGLNHKGNIVIKYNNQQQFNSILDKLKN 281
>gi|229829503|ref|ZP_04455572.1| hypothetical protein GCWU000342_01595 [Shuttleworthia satelles DSM
14600]
gi|229791934|gb|EEP28048.1| hypothetical protein GCWU000342_01595 [Shuttleworthia satelles DSM
14600]
Length = 339
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 109/337 (32%), Positives = 175/337 (51%), Gaps = 47/337 (13%)
Query: 1 MSNNYSKRRLGRGLAALIGEVN-------------------------------------- 22
M+ K LGRGL +LI
Sbjct: 1 MA--AKKSGLGRGLDSLIPNKTVAEGKLTSRTGGKAANKPSAVKKRSGRKQESDLESEKL 58
Query: 23 -QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
++ + + K E + ++I + PN PR F + LE+L +SI+ G++ PL+V
Sbjct: 59 TKTAANRKAKENQAGEGVELVNIQKVEPNREQPRKRFNEDSLEELAESIRQFGVLSPLLV 118
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
+ D Y+IIAGERR+RAAK+A L EVPVIIRN+ + +EIA++EN+QR+DLNP+EEA
Sbjct: 119 QERD-DYYEIIAGERRWRAAKIAGLKEVPVIIRNLSEQEIVEIALIENIQREDLNPIEEA 177
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV- 200
Y++L+ E+ Q+ + V KSR+ V N +R+LKL V++M+ E IS GHAR ++
Sbjct: 178 EAYKRLLDEFHLKQDQVAERVSKSRTAVTNSMRLLKLDPRVQQMVIDEMISTGHARAILG 237
Query: 201 --STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG-SREKEKYLTDLEKKI 257
+ LAQ +KMSVRD E V+ ++ + + + + +E+ +
Sbjct: 238 LGNKDLQFDLAQKAFDQKMSVRDVEREVRRLQKPVSRKSETQKALTEQMMAVYQTMEENL 297
Query: 258 SSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICSLL 293
S +G + I R++ KG+ I+Y + ++L+ I L+
Sbjct: 298 KSALGTKVRICPRDHQKGKLEIEYYSQDELQRIMDLI 334
>gi|227876529|ref|ZP_03994641.1| stage 0 DNA-binding protein [Mobiluncus mulieris ATCC 35243]
gi|269977730|ref|ZP_06184690.1| probable chromosome-partitioning protein ParB [Mobiluncus mulieris
28-1]
gi|306817490|ref|ZP_07451234.1| stage 0 DNA-binding protein [Mobiluncus mulieris ATCC 35239]
gi|307699850|ref|ZP_07636901.1| ParB-like protein [Mobiluncus mulieris FB024-16]
gi|227843070|gb|EEJ53267.1| stage 0 DNA-binding protein [Mobiluncus mulieris ATCC 35243]
gi|269934034|gb|EEZ90608.1| probable chromosome-partitioning protein ParB [Mobiluncus mulieris
28-1]
gi|304649714|gb|EFM46995.1| stage 0 DNA-binding protein [Mobiluncus mulieris ATCC 35239]
gi|307614888|gb|EFN94106.1| ParB-like protein [Mobiluncus mulieris FB024-16]
Length = 342
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 100/343 (29%), Positives = 170/343 (49%), Gaps = 52/343 (15%)
Query: 1 MSNNYSKRRLGRGLAALIGEV--------------------------------------- 21
M+ KR LG GL ALI
Sbjct: 1 MA---KKRALGSGLGALIPPAPASRGVDVIVPPKHGSQASPEDAKVHDLLNPRSPRTQTK 57
Query: 22 ---NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
N + + + S+VPNP+ PR F+ E L +L +SIKS G++QP
Sbjct: 58 AKGNSKSKGEPELVAVPGMRMAELPLQSVVPNPNQPREVFDEEALRELAESIKSVGVLQP 117
Query: 79 LIVRAIDNG----LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
++VR +++ Y+++ GERR+RA+K+A ++P IIR ++ A++EN+QR +
Sbjct: 118 IVVRPLEDSGGESRYELVMGERRWRASKLAGKRQIPAIIRETADEDMRRDALLENLQRVN 177
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
LNPLEEA Y+Q+I+E+G TQ + + +SR ++N LR+LKLP++V+ + IS G
Sbjct: 178 LNPLEEAAAYQQMIAEFGITQELLAKKLSRSRPQISNTLRLLKLPATVQVKVAAGVISAG 237
Query: 195 HARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
HAR L+ + ++A IV++ +SVR TEE+V + +K KR++ ++L
Sbjct: 238 HARALLGIGNHEAMAALADRIVAEGLSVRATEEIVSLGEAEKPKRERKPRVKPALSEHLM 297
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + K+ + ++++ +KG I++ L I +
Sbjct: 298 ESKTKLEDLLQTRVNLQVGKHKGSISIEFADEADLNRIVEFIS 340
>gi|332524947|ref|ZP_08401133.1| chromosome segregation DNA-binding protein [Rubrivivax
benzoatilyticus JA2]
gi|332108242|gb|EGJ09466.1| chromosome segregation DNA-binding protein [Rubrivivax
benzoatilyticus JA2]
Length = 294
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 80/272 (29%), Positives = 145/272 (53%), Gaps = 4/272 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+T + + + P + PR + L +L +SIK G++QP++VR + G +
Sbjct: 22 SETPAGDGQPTTLRLEQLEPGRYQPRTRMDEGSLYELAESIKGQGVMQPILVRPVAEGRW 81
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERRFRAAK+A L VPV+++ V ++++ +A++EN+QR+DLNPLEEA G +L+
Sbjct: 82 EIIAGERRFRAAKIAGLDRVPVLVKPVPDEAAAVMALIENIQREDLNPLEEAQGLRRLVQ 141
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
E+G T VG+SRS N+LR+L L V++M+ ++ +GHAR L++ +
Sbjct: 142 EFGLTHEQAAQAVGRSRSAATNLLRLLNLADPVQQMLLAGDLDMGHARALLALEAAPQIM 201
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-- 267
+ + Q + + + + K + + LE++++ +G + I
Sbjct: 202 AAHEIASRKLSVRDAEKLVQRQSRPEPTPREKAAAGKSRDVLRLEERLADTLGAAVEIRV 261
Query: 268 --KHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ R G+ I + + ++L + LG +
Sbjct: 262 RSRGRKQSGEITIAFGSLDELNGLLERLGAAE 293
>gi|228918091|ref|ZP_04081619.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228841571|gb|EEM86687.1| Stage 0 sporulation protein J [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 266
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 98/268 (36%), Positives = 159/268 (59%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I I + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 2 KEEETVQEIVITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARK-SIKGYEIVA 60
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 61 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 120
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQ 210
TQ + +GKSR ++AN R+L LP V++MI ++S+ H RTL++ D L +
Sbjct: 121 TQEQLAKRLGKSRPYIANYTRLLSLPYFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 180
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 181 RIEKEGLNVRQLEKIVQEINQSVSRETKQVK--KERNIFFIERETFLREKFGTDVKIKET 238
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 239 KKEKGKIEIEFFNKEDLNRILELLAQKN 266
>gi|317151730|ref|YP_004119778.1| parB-like partition protein [Desulfovibrio aespoeensis Aspo-2]
gi|316941981|gb|ADU61032.1| parB-like partition protein [Desulfovibrio aespoeensis Aspo-2]
Length = 306
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 101/302 (33%), Positives = 163/302 (53%), Gaps = 20/302 (6%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
R LGRGL AL+G V ++K + I + IVPNP+ PR F L+DLC
Sbjct: 6 RGLGRGLDALLGGV-----REDEKKTSASAEVRLIGVGDIVPNPYQPRREFSQAALDDLC 60
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SI+S G++QP++VR++ NG ++++AGERR RA + A L+E+P ++R + ++ SL IA++
Sbjct: 61 ESIRSRGVLQPVLVRSVANGRFELVAGERRLRATRQAGLAEIPALVREMTDQESLAIALI 120
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLN +EEA GY QL E+G +Q ++ VGKSRS VAN +R+L LP + + I+
Sbjct: 121 ENLQREDLNAIEEAQGYLQLQQEFGLSQEELARQVGKSRSAVANAMRLLNLPDAAQRDIQ 180
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ ++ GH R ++S SD + A++ ++VR E K
Sbjct: 181 QGAMTAGHGRAIMSVSDAAAQAELHQRVVGNGLTVRQAEAQAVFWKGKGRLPGASEMDMP 240
Query: 245 EKE------------KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
K L ++ ++ + + I KG+ I Y + + L+
Sbjct: 241 SKPGRSAPAEAEPLTPELESVQAALNELPDIKVRIAGSMEKGRVTISYNSEDGLRSFVEK 300
Query: 293 LG 294
+G
Sbjct: 301 VG 302
>gi|229094590|ref|ZP_04225657.1| Stage 0 sporulation protein J [Bacillus cereus Rock3-42]
gi|229187708|ref|ZP_04314844.1| Stage 0 sporulation protein J [Bacillus cereus BGSC 6E1]
gi|228595776|gb|EEK53460.1| Stage 0 sporulation protein J [Bacillus cereus BGSC 6E1]
gi|228688837|gb|EEL42668.1| Stage 0 sporulation protein J [Bacillus cereus Rock3-42]
Length = 266
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 99/268 (36%), Positives = 160/268 (59%), Gaps = 7/268 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ I I + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+A
Sbjct: 2 KEEETIQEIVITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARK-SIKGYEIVA 60
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E
Sbjct: 61 GERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNV 120
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQ 210
TQ + +GKSR ++AN R+L LPS V++MI ++S+ H RTL++ D L +
Sbjct: 121 TQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLK 180
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH- 269
I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 181 RIEKEGLNVRQLEKIVQEINQSVSRETKQVK--KERNIFFIERETFLREKFGTDVKIKET 238
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL + +
Sbjct: 239 KKEKGKIEIEFFNKEDLNRILELLAQKN 266
>gi|116329509|ref|YP_799229.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116122253|gb|ABJ80296.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
Length = 291
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 109/299 (36%), Positives = 167/299 (55%), Gaps = 14/299 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL LI ++ + + I I I PNP PR F
Sbjct: 1 MA--IKPKALGRGLGNLIP----VNENKTPINSSAEGALREIRISEIRPNPSQPRKTFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L ++IK+HG+IQP++V+ +D G Y+II+GERR+RA K+A ++P I++NV
Sbjct: 55 ESLRELSETIKAHGVIQPIVVKQLDVG-YEIISGERRYRACKLAGFVKIPAIVKNVSENQ 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
S+E+AI+EN+QR+DLNP+EEA+ Y+ L + DI + VGK+RS ++N++R+L+LP
Sbjct: 114 SMEMAIIENIQREDLNPIEEAIAYKTLSEKLNLKITDISTRVGKNRSTISNLIRLLQLPD 173
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
SV+++I+ IS GHAR L LA I K ++ R E+LV ++
Sbjct: 174 SVQDLIKNGRISEGHARPLLSLADKKKIEQLAYQIAEKGLTARQVEDLVSNLTEERSSV- 232
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
+ K+ + +LE K K + I I H N KG+ I Y E ++ I + LG
Sbjct: 233 -PEKKKSRKDVNIVELENKFRKKYSMKIEISHNQNSGKGKMAIVYPNLEAMEKILNALG 290
>gi|333029836|ref|ZP_08457897.1| parB-like partition protein [Bacteroides coprosuis DSM 18011]
gi|332740433|gb|EGJ70915.1| parB-like partition protein [Bacteroides coprosuis DSM 18011]
Length = 292
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 97/286 (33%), Positives = 155/286 (54%), Gaps = 14/286 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL AL+ S ++ S + I I I NP+ PR F
Sbjct: 1 MA--QKRNTLGRGLDALL--------SMDEIKTDGSSSINEIEISKISVNPNQPRREFNQ 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI GIIQP+ +R + Y+IIAGERRFRA+++A L +P IR +++
Sbjct: 51 EALEELASSISEIGIIQPITLRELSLDRYQIIAGERRFRASQLAGLKSIPAYIRKASDEN 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A++EN+QR+DLN +E AL Y+ LI EY TQ + VGK R+ +AN +R+LKLP+
Sbjct: 111 VLEMALIENIQREDLNAIEVALAYQHLIEEYDLTQERLSERVGKKRATIANYVRLLKLPA 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ ++ +I +GHAR L+ +P + I+ SVR EE+V++ + +E
Sbjct: 171 PIQVALQHRQIDMGHARALLPLENPKLQIKLLKDIIKNNYSVRKVEEIVKDLNAGEELSS 230
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYET 282
+ + + + L++ +S + + KG+ I +
Sbjct: 231 GKKKQNAQLPEEFNILKQHLSGFFNTKVQLTCSSKGKGKISIPFGN 276
>gi|223043439|ref|ZP_03613485.1| stage 0 sporulation protein J [Staphylococcus capitis SK14]
gi|222443228|gb|EEE49327.1| stage 0 sporulation protein J [Staphylococcus capitis SK14]
Length = 276
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 89/274 (32%), Positives = 162/274 (59%), Gaps = 4/274 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ + ++ E ++I I PNP+ PR F+ + L+DL +SI+ HGI+QP+++R
Sbjct: 2 TQNDDQRLQLERDEQVQHVAIDLIKPNPYQPRKTFDEDKLQDLAKSIQQHGILQPIVIRE 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G Y ++ GERRFRA+++ L +P I++ + ++ +E+AI+EN+QR+DLN +EEA
Sbjct: 62 TIQGYYIVV-GERRFRASQIVGLESIPAIVKKLSDEDMMELAIIENLQREDLNAIEEAES 120
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS 203
Y++L+S+ TQ ++ +GKSR ++AN+LR+L LPS++ +M+++ E+S H RTL+S
Sbjct: 121 YKKLMSDLKITQQEVARRLGKSRPYIANMLRLLHLPSAIMKMVKEGELSGAHGRTLLSLK 180
Query: 204 D---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
D + + V + SVR E+ V + E K + + +K K++ E+ + +
Sbjct: 181 DEALMKKVGKEAVRESWSVRQLEQYVNTYLQEGESNAKSKQANNKKPKFIQQQERLLKEQ 240
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
G + I N G+ ++++ ++ K I L
Sbjct: 241 YGSKVEISTSKNIGKITFEFKSEDEFKRIIQQLN 274
>gi|291303910|ref|YP_003515188.1| parB-like partition protein [Stackebrandtia nassauensis DSM 44728]
gi|290573130|gb|ADD46095.1| parB-like partition protein [Stackebrandtia nassauensis DSM 44728]
Length = 358
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 99/347 (28%), Positives = 157/347 (45%), Gaps = 59/347 (17%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQ-------------------------- 39
K LG+GLAALI Q + E T + +
Sbjct: 3 KKGGLGKGLAALIPSEKQEAPAEETATVSRETAPVAETVPEPRAGDAAAATAEPTAPPSD 62
Query: 40 ---------------------DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + I NP PR F+ EG+E+L S+ G++QP
Sbjct: 63 VSRETADATDPDLVPVPGAVYRLVPLAEIDTNPKQPRQVFDEEGIEELKVSLSEVGLLQP 122
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+ VR +G Y++I GERR RAA+ +P I+R ++ L A++EN+ R LNPL
Sbjct: 123 IAVRETGDG-YELIVGERRTRAARELGWETIPAIVRETRDEDLLRDALLENIHRVQLNPL 181
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR- 197
EE Y+QL+ E+G TQ ++ +G+SR ++N +R+L LP +V+ + +S GHAR
Sbjct: 182 EEGAAYQQLLDEFGVTQEELSKRIGRSRPQISNTIRLLSLPPAVQRRVAAGVLSAGHARA 241
Query: 198 --TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK--------KIFEGSREKE 247
TL + +LA IV++ MSVR TEE V + K + + K +
Sbjct: 242 ILTLPTDEKREALATRIVAEGMSVRATEEAVSMELAKLDPEEPADVSRETKPKRNGALRA 301
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ DL ++S + + KG+ I++ + L+ I S +G
Sbjct: 302 PGIADLTDRLSDHFDTKVKVSLGQRKGRIVIEFGSVGDLERITSSMG 348
>gi|228994198|ref|ZP_04154098.1| Stage 0 sporulation protein J [Bacillus pseudomycoides DSM 12442]
gi|229000268|ref|ZP_04159837.1| Stage 0 sporulation protein J [Bacillus mycoides Rock3-17]
gi|229007792|ref|ZP_04165378.1| Stage 0 sporulation protein J [Bacillus mycoides Rock1-4]
gi|228753469|gb|EEM02921.1| Stage 0 sporulation protein J [Bacillus mycoides Rock1-4]
gi|228759600|gb|EEM08577.1| Stage 0 sporulation protein J [Bacillus mycoides Rock3-17]
gi|228765650|gb|EEM14304.1| Stage 0 sporulation protein J [Bacillus pseudomycoides DSM 12442]
Length = 266
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 99/266 (37%), Positives = 155/266 (58%), Gaps = 7/266 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E I++ + PNP+ PR F+ E +++L SIK HGI+QPLIVR Y+I+AGE
Sbjct: 4 EEKIQEIALTELRPNPYQPRKNFQKEAIQELAASIKEHGILQPLIVRK-SIKGYEIVAGE 62
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK A L +VP ++R ++ + +E A++EN+QR+DLNP+EEAL Y+ L+ E TQ
Sbjct: 63 RRYRAAKEACLEKVPAVVRELNEQQMMEFALLENLQREDLNPMEEALAYQMLMDELNVTQ 122
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVI 212
+ +GKSR ++AN +R+L LP V+EMI +S+ H R T+ SL + I
Sbjct: 123 EQLAKRLGKSRPYIANYVRLLTLPLFVQEMIANGSLSMAHGRTLLTIKDEEQLKSLLKRI 182
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RN 271
+ ++VR E++VQ+ + + K + RE+ + + E + K G + IK +
Sbjct: 183 EKEGLNVRQLEQIVQQIHQRVSRETKTVK--RERNIFFEERETLLREKFGTGVKIKETKK 240
Query: 272 NKGQFCIKYETNEQLKIICSLLGEND 297
KG+ I++ E L I LL +
Sbjct: 241 EKGKIEIEFFDKEDLNRILELLSGEN 266
>gi|269797060|ref|YP_003316515.1| chromosome segregation DNA-binding protein [Sanguibacter keddieii
DSM 10542]
gi|269099245|gb|ACZ23681.1| chromosome segregation DNA-binding protein [Sanguibacter keddieii
DSM 10542]
Length = 392
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 82/281 (29%), Positives = 142/281 (50%), Gaps = 4/281 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + + + SI PN PR F+ L +L SI+ G++QP++
Sbjct: 107 AATGTEPESTLVPVPGATFAHLPVESIRPNARQPRTVFDEGDLAELVGSIREIGVLQPIV 166
Query: 81 VRAIDNGLYKI-IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
VR D I GERR+RA++ A L +P IIR ++ L A++EN+ R LNPLE
Sbjct: 167 VRPTDEPDRYELIMGERRWRASQEAGLGAIPAIIRETEDGDLLRDALLENLHRSALNPLE 226
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y QL+ ++G T ++ + +SR ++N LR+LKLP V+ + +S GHAR L
Sbjct: 227 EAAAYRQLLDDFGCTHEELAVRISRSRPQISNTLRLLKLPPLVQRRVAAGVLSAGHARAL 286
Query: 200 ---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ LAQ IV++ +SVR TEE+V ++ + + + + + +L +
Sbjct: 287 LGLPDGAQIERLAQRIVAEGLSVRATEEIVALGGDEAPTKPAQRPRAGTRIQAIDELATR 346
Query: 257 ISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+S + + + KG+ +++ + E L I +++ +
Sbjct: 347 LSDRFETRVKVDLGKTKGKVTVEFASVEDLNRILNVMAPEE 387
Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE 29
MS +R LGRGL ALI +
Sbjct: 1 MSE--KRRGLGRGLGALIPTAPDLERPVD 27
>gi|313669160|ref|YP_004049444.1| chromosome segregation protein [Neisseria lactamica ST-640]
gi|313006622|emb|CBN88088.1| putative chromosome segregation protein [Neisseria lactamica
020-06]
Length = 286
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A L+E+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQAALQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N +K N KG+ + ++T E + LG
Sbjct: 225 RPEPKKTAAADIGRLNDLLTEKLGVNAEVKTANHKKGRIVLYFDTPETFGHLLEQLG 281
>gi|15677774|ref|NP_274938.1| ParB family protein [Neisseria meningitidis MC58]
gi|12230454|sp|Q9JXP5|PARB_NEIMB RecName: Full=Probable chromosome-partitioning protein parB
gi|7227202|gb|AAF42273.1| ParB family protein [Neisseria meningitidis MC58]
gi|316985567|gb|EFV64514.1| parB-like partition s domain protein [Neisseria meningitidis
H44/76]
gi|325133403|gb|EGC56067.1| putative chromosome partitioning protein parB [Neisseria
meningitidis M13399]
gi|325139595|gb|EGC62135.1| putative chromosome partitioning protein parB [Neisseria
meningitidis CU385]
gi|325200993|gb|ADY96448.1| putative chromosome partitioning protein parB [Neisseria
meningitidis H44/76]
Length = 286
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 166/297 (55%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIRPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RAA++A L+E+P +I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQAALQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + + L ++ K+G+N +K N KG+ + ++T E + LG
Sbjct: 225 RPEPKKTAAADIGRLNDLLTEKLGVNAEVKTANHKKGRIVLYFDTPETFGHLLEQLG 281
>gi|118579023|ref|YP_900273.1| parB-like partition proteins [Pelobacter propionicus DSM 2379]
gi|118501733|gb|ABK98215.1| chromosome segregation DNA-binding protein [Pelobacter propionicus
DSM 2379]
Length = 284
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 104/289 (35%), Positives = 160/289 (55%), Gaps = 16/289 (5%)
Query: 9 RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQ 68
LG+G+AAL+ K+T I I PN PR F ++ LE+L
Sbjct: 6 GLGKGMAALL---------HVKETTEDNREYFLCPIEMIRPNKSQPRKSFAADKLEELAD 56
Query: 69 SIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
SI+ GIIQPL+V + Y+I+AGERR+RAA+ A L EVPV+IR + LE+A++E
Sbjct: 57 SIREQGIIQPLVVTKKE-NCYEIVAGERRWRAAQKAGLREVPVVIREASENAVLELALIE 115
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
N+QR+DLN +EEA Y L+ ++ +Q D+ VGKSR V N LR+LKLP ++ I +
Sbjct: 116 NIQRQDLNAIEEAQAYRSLVEQFAISQEDVAKRVGKSRVAVTNSLRLLKLPEEIQRDIVE 175
Query: 189 EEISLGHARTLVSTSDPLSLAQVIV---SKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
E +S+GHAR L+ +P +A+ +++SVR TEELV+ + ++
Sbjct: 176 ERLSMGHARALLPLENPELIAKARHEILQRQLSVRATEELVRRLK--LNPHPLPGKRPQQ 233
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQLKIICSLL 293
+ L+ LE ++ + ++I+ K G+ I + ++L I LL
Sbjct: 234 PDLLLSSLEDQLQKRFQSRVAIRKTGAKAGKLEIHFCDADELTRIIDLL 282
>gi|298529218|ref|ZP_07016621.1| parB-like partition protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510654|gb|EFI34557.1| parB-like partition protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 286
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 105/298 (35%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++ LG+GL ALI E +S+ + PNP+ PR F E +
Sbjct: 3 KKEKGLGKGLDALI---------KPSFYEEKNTDSVQLSVQKVKPNPYQPRKNFAEESIS 53
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ +G++QP++VR +N Y+IIAGERR+RA+ A L+ +P ++R+ DN L I
Sbjct: 54 ELAASIQENGVLQPILVRKNENQEYEIIAGERRWRASIEAGLNTIPALVRDYDNNQVLAI 113
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+E+A ++L SE G Q ++ +GKSRS + N LR++KLP +R+
Sbjct: 114 ALIENLQREDLNPMEQAYALQRLQSELGINQEELADRIGKSRSQLTNTLRLIKLPEKIRD 173
Query: 185 MIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
M+ +S GHAR + L A IVS+ +SVR TEELV++ ++K E
Sbjct: 174 MVEDRSLSPGHARCLLGIKDEELMLEAAGKIVSRNLSVRQTEELVKKL-----TQEKKKE 228
Query: 242 GSREKEKYLTDLEKKISSKV--GLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
R K + LE +I K+ L++ + KG+ ++Y +L + LG ++
Sbjct: 229 SRRNKSDFAGSLESRIKEKIENKLSVQTQGDEKKGKVVLQYRNENELDALLKCLGIDN 286
>gi|91785991|ref|YP_546943.1| chromosome segregation DNA-binding protein [Polaromonas sp. JS666]
gi|91695216|gb|ABE42045.1| chromosome segregation DNA-binding protein [Polaromonas sp. JS666]
Length = 311
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 100/306 (32%), Positives = 173/306 (56%), Gaps = 19/306 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETI--PESQDCISIHSIVPNPHNPRNYFESEG 62
+ LGRGL AL+G + + P + + +VP + PR +
Sbjct: 4 KKPKGLGRGLEALLGPKVSESGDVDNANSSATSPGLPATLRLADMVPGQYQPRTRMDEGA 63
Query: 63 LEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L +L +SIK+ GI+QP++VR +G Y+IIAGERRFRAAK+A L VPV++R+V +
Sbjct: 64 LYELAESIKAQGIMQPILVRRLNSGAHDGKYEIIAGERRFRAAKIAGLDSVPVLVRDVPD 123
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+S+ +A++EN+QR+DLNPLEEA G ++L+ E+G T VG+SRS +N+LR+L L
Sbjct: 124 ESAAAMALIENIQREDLNPLEEAQGLQRLVKEFGLTHELAAQAVGRSRSAASNLLRLLNL 183
Query: 179 PSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+ M+ ++ +GHAR L+ + ++ A I +KKMSVR+TE LV++ +
Sbjct: 184 ADPVQTMLMAGDLDMGHARALLALDRATQITAANQISAKKMSVRETENLVKKLSAEF--S 241
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN---------NKGQFCIKYETNEQLK 287
+ + ++EK + +E++++ + + ++ + G+ I++ + ++L
Sbjct: 242 LRPQKAAKEKSRDTRRVEEELADLLMAEVEVRVKKQVKRNGRHEEMGEVAIQFASMDELN 301
Query: 288 IICSLL 293
+ L
Sbjct: 302 GLIERL 307
>gi|319891314|ref|YP_004148189.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Staphylococcus pseudintermedius
HKU10-03]
gi|317161010|gb|ADV04553.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Staphylococcus pseudintermedius
HKU10-03]
Length = 316
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 88/269 (32%), Positives = 153/269 (56%), Gaps = 4/269 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ + E +++ I PNP+ PR F++E L +L QSI HG++QP+IV Y
Sbjct: 48 QSQQNDSEQVQRLALTEIRPNPYQPRKTFDAEKLTELAQSIAQHGVLQPIIV-TQAIKGY 106
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
I+AGERR+RA+ A L+++P I++ + E+AI+EN+QR+DLN LEEA Y+QL+
Sbjct: 107 HIVAGERRYRASLEAGLTDIPAIVKPFSDGEMRELAIIENLQREDLNALEEAESYQQLMQ 166
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPL 206
TQ ++ + +GKSR ++AN+LR+LKLP +R +IR+ ++S GH RTL + +
Sbjct: 167 HLTLTQQEVAARLGKSRPYIANMLRLLKLPVKIRTLIREGQLSGGHGRTLLALKTPETMV 226
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS 266
A++ + + SVR E+ V E ++ + + +K + E+++ + G ++
Sbjct: 227 HYAKLAIRESWSVRYLEQRVAEHTGSTQQATTCQQHTTKKPALIRQHEQQLKEQYGTSVE 286
Query: 267 IKHRNNKGQFCIKYETNEQLKIICSLLGE 295
I + N G+ + + + + LL
Sbjct: 287 ITTKKNVGEITFTFHSESDYRRLIQLLKN 315
>gi|256830805|ref|YP_003159533.1| parB-like partition protein [Desulfomicrobium baculatum DSM 4028]
gi|256579981|gb|ACU91117.1| parB-like partition protein [Desulfomicrobium baculatum DSM 4028]
Length = 294
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 99/291 (34%), Positives = 155/291 (53%), Gaps = 10/291 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
KR LGRGL LI N + + + I+++ PN H PR++F+ LE
Sbjct: 3 MKKRGLGRGLDVLIKSRNVEPEHEAE--------IVALDINALEPNIHQPRHHFDQAALE 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
+L SIKS G+IQP++VR + ++++AGERR+RA +MA L + I+R +D+ S+
Sbjct: 55 ELAASIKSQGLIQPVLVRPLPTPGRFELVAGERRWRACRMAGLETIDCIVRRMDDSESMA 114
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR+DLNP+EEA Q+ + TQ ++ +GKSR V N LR+LKLP V+
Sbjct: 115 IALIENLQREDLNPIEEARALGQIKEHFKITQEELADKIGKSRPAVTNSLRLLKLPEKVQ 174
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
M+ +S GHAR L+ DP +A + + + + K+K+ + E
Sbjct: 175 LMLEANTLSAGHARALLGLDDPEGIAMLAEQIVHKNLNVRDTEELVKKIKQKKMEPEEKP 234
Query: 244 REKEKYLTDLEKKISSKVGL-NISIKHRNNKGQFCIKYETNEQLKIICSLL 293
R + + D+ I S G + KG+ Y T+E+ + I S L
Sbjct: 235 RPGKPVVEDIAGVIKSLAGTFTVKHSGTPKKGKIVFSYATSEEREKIASFL 285
>gi|219555764|ref|ZP_03534840.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T17]
gi|289567874|ref|ZP_06448101.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T17]
gi|289541627|gb|EFD45276.1| chromosome partitioning protein parB [Mycobacterium tuberculosis
T17]
Length = 344
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 88/319 (27%), Positives = 153/319 (47%), Gaps = 37/319 (11%)
Query: 1 MSNNYSKRR-LGRGLAALIGEVNQSIDS--------------------PEKKTETIPESQ 39
M+ ++ LGRGLAALI +S P T +
Sbjct: 1 MTQPSRRKGGLGRGLAALIPTGPADGESGPPTLGPRMGSATADVVIGGPVPDTSVMGAIY 60
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR----AIDNGLYKIIAGE 95
I +I NP PR F+ E L +L SI+ G++QP++VR + Y+I+ GE
Sbjct: 61 REIPPSAIEANPRQPRQVFDEEALAELVHSIREFGLLQPIVVRSLAGSQTGVRYQIVMGE 120
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAA+ A L+ +P I+R + + L A++EN+ R LNPLEEA Y+QL+ E+G T
Sbjct: 121 RRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTH 180
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+++ + +G+SR + N++R+LKLP V+ + +S GHAR L+S + + S+
Sbjct: 181 DELAARIGRSRPLITNMIRLLKLPIPVQRRVAAGVLSAGHARALLSLEAGPEAQEELASR 240
Query: 216 -------KMSVRDTEELVQEQDNKKEKR-----KKIFEGSREKEKYLTDLEKKISSKVGL 263
+ +T L + N++ + L D+ +++S+
Sbjct: 241 IVAEGLSVRATEETVTLANHEANRQAHHSDATTPAPPRRKPIQMPGLQDVAERLSTTFDT 300
Query: 264 NISIKHRNNKGQFCIKYET 282
+++ KG+ +++ +
Sbjct: 301 RVTVSLGKRKGKIVVEFGS 319
>gi|299531158|ref|ZP_07044570.1| parB-like partition protein [Comamonas testosteroni S44]
gi|298720861|gb|EFI61806.1| parB-like partition protein [Comamonas testosteroni S44]
Length = 309
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 100/304 (32%), Positives = 167/304 (54%), Gaps = 17/304 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+G + + ++++ +V + PR + L
Sbjct: 4 KKPKGLGRGLEALLGPKVSEAEQAAASGQQANL-PSSLALNVMVAGQYQPRTRMDEGALY 62
Query: 65 DLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+L +SIK+ GI+QP++VR + G Y+IIAGERRFRAA +A LSEVPV++R V +++
Sbjct: 63 ELAESIKAQGIMQPILVRQLSRGDNAGKYEIIAGERRFRAAHIAGLSEVPVLVREVPDEA 122
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G +L+ E+G T VG+SRS N+LR+L L
Sbjct: 123 AAAMALIENIQREDLNPLEEAQGLARLVKEFGLTHEQTAQAVGRSRSAATNLLRLLNLAE 182
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ +I +GHAR L++ + I +KKMSVR+ E LV++ + +
Sbjct: 183 PVQTMLMAGDIDMGHARALLTLDRATQITAGNQIAAKKMSVREAESLVKKI-GAEFNLTR 241
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-----NK----GQFCIKYETNEQLKII 289
K + + +E+++S + ++ ++ + K G+ I++ + E+L I
Sbjct: 242 QKAKKDGKSRDVKRIEEELSDLLTADVEVRIKKTVRRHGKQQEMGEIAIQFGSLEELNGI 301
Query: 290 CSLL 293
L
Sbjct: 302 IEKL 305
>gi|312136213|ref|YP_004003551.1| parb-like partition protein [Caldicellulosiruptor owensensis OL]
gi|311776264|gb|ADQ05751.1| parB-like partition protein [Caldicellulosiruptor owensensis OL]
Length = 285
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 105/290 (36%), Positives = 168/290 (57%), Gaps = 11/290 (3%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD---CISIHSIVPNPHNPRNYFESEGL 63
K+RLGRGL AL G+ S + + E+ + I+I I + + PR F E +
Sbjct: 2 KKRLGRGLDALFGDEINSSEKEFEAGFDDKENIEKIEEINIDLIELSENQPRKIFNEEEI 61
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SIKS G+IQPL+V+ + +IAGERR RA KMA + +V I++ K+ LE
Sbjct: 62 EELAGSIKSVGLIQPLVVQKKGDKYV-LIAGERRLRACKMAGIEKVKCIVKEY--KNPLE 118
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QRKDLNP E+AL +++L+ E+GYTQ ++ + SRS VAN LRIL L +
Sbjct: 119 IALIENIQRKDLNPYEKALAFKRLMDEFGYTQEELARRLAISRSKVANTLRILNLGEQII 178
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+++ K +IS GHA+ L+S D ++ EL Q ++++K++ E
Sbjct: 179 DLLIKGKISEGHAKVLLSVEDEEQRNKLAQLVVEKNLSVRELEQIVKSREDKKEFELESE 238
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+E + + VGL + I+ + N+G+ I++ ++E+L+ I S+L
Sbjct: 239 IIREIE-----ENLMKLVGLRVKIRKKKNRGKIEIEFSSDEELEKIISIL 283
>gi|28493768|ref|NP_787929.1| chromosome partitioning protein ParB [Tropheryma whipplei str.
Twist]
gi|28476810|gb|AAO44898.1| chromosome partitioning protein ParB [Tropheryma whipplei str.
Twist]
Length = 298
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 97/295 (32%), Positives = 151/295 (51%), Gaps = 14/295 (4%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIP----ESQDCISIHSIVPNPHNPRNYFESEG 62
+ LG+GL L E + + I I PNP PR F+
Sbjct: 5 RSGLGKGLDDLTSSAPADRGPIEAFFPSNSPFRFSGVINVPITDISPNPRQPRKVFDPNS 64
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L +L SIK G IQP++VR G ++ GERR RAAKMA LS VP I++ +DN+ L
Sbjct: 65 LSELASSIKEVGFIQPIVVRKTKLGYV-LVIGERRLRAAKMAGLSHVPAIVKTLDNRDML 123
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
A+ EN+ R +LNP+EEAL Y +L+ E+ +Q+++G +GKSR +V N +R+L+LP V
Sbjct: 124 RQALFENIHRAELNPIEEALAYSELLREFDVSQDELGQTLGKSRPYVTNTIRLLRLPPEV 183
Query: 183 REMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++++ K +I+ GHAR L+ + ++ + LA+ I +SVR E L+ K
Sbjct: 184 QDLLTKGKITPGHARPLLALENRAEMIRLAKRIADAGLSVRQAEALIT------TSSPKR 237
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ K L + + +S+ KG+ I++ T L+ I +G
Sbjct: 238 LFVAGSVRKGLDAAAASLGREFDTKVSVNIGQRKGKIVIEFTTVADLRRILLKMG 292
>gi|325103009|ref|YP_004272663.1| parB-like partition protein [Pedobacter saltans DSM 12145]
gi|324971857|gb|ADY50841.1| parB-like partition protein [Pedobacter saltans DSM 12145]
Length = 306
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 96/279 (34%), Positives = 156/279 (55%), Gaps = 4/279 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
Q + S + I I+ I NP+ PR F+ E L++L +SIK G+IQP
Sbjct: 26 SSYTQQQVTETNPGSVSVGSVNKILINQIEVNPYQPRFEFDEEALQELSESIKLQGLIQP 85
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+ VR + + Y++I+GERR RA KMA + ++P +R +++ LE+A++EN+QR++LN +
Sbjct: 86 ITVRRVGDNRYQLISGERRLRATKMAGIEDIPAYVRTANDQQMLEMALIENIQRENLNAI 145
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
E AL ++++I E Q ++G V K+RS V N LR+LKLP ++ IR ++S+GHAR
Sbjct: 146 EVALSFQRMIDECSLKQEELGDRVSKNRSTVTNYLRLLKLPPVIQASIRDSQLSMGHARA 205
Query: 199 LVSTSDPLSLAQVIV---SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
L+S DP + + K +SVR EELV+ ++ + + + + ++
Sbjct: 206 LISVEDPANQLFIFQEIIDKDLSVRKVEELVRNIKQNEQVKIEKGKKAEGISFQYQKIQD 265
Query: 256 KISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+SSK I +K N KG I + +N+ L I LL
Sbjct: 266 DLSSKFATKIKMKVGTNGKGAIEIPFLSNDDLNRILELL 304
>gi|221069720|ref|ZP_03545825.1| parB-like partition protein [Comamonas testosteroni KF-1]
gi|220714743|gb|EED70111.1| parB-like partition protein [Comamonas testosteroni KF-1]
Length = 309
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 166/304 (54%), Gaps = 17/304 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+G + ++++ +V + PR + L
Sbjct: 4 KKPKGLGRGLEALLGPKVSEAEQVAASGSQANL-PSTLALNVMVAGQYQPRTRMDEGALY 62
Query: 65 DLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+L +SIK+ GI+QP++VR + G Y+IIAGERRFRAA +A LSEVPV++R V +++
Sbjct: 63 ELAESIKAQGIMQPILVRQLSRGDNAGKYEIIAGERRFRAAHIAGLSEVPVLVREVPDEA 122
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G +L+ E+G T VG+SRS N+LR+L L
Sbjct: 123 AAAMALIENIQREDLNPLEEAQGLARLVKEFGLTHEQTAQAVGRSRSAATNLLRLLNLAE 182
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ +I +GHAR L++ + I ++KMSVR+ E LV++ + +
Sbjct: 183 PVQTMLMAGDIDMGHARALLTLDRATQITAGNQIAARKMSVREAESLVKKI-GAEFNLTR 241
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-----NK----GQFCIKYETNEQLKII 289
K + + +E+++S + ++ ++ + K G+ I++ + ++L +
Sbjct: 242 QKAKKDGKSRDVKRIEEELSDLLTADVEVRIKKTVRRHGKQQEMGEIAIQFGSLDELNGL 301
Query: 290 CSLL 293
L
Sbjct: 302 IEKL 305
>gi|323465532|gb|ADX77685.1| chromosome partioning protein, ParB family [Staphylococcus
pseudintermedius ED99]
Length = 316
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 89/269 (33%), Positives = 153/269 (56%), Gaps = 4/269 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ + E +++ I PNP+ PR F++E L +L QSI HG++QP+IV Y
Sbjct: 48 QSQQNDSEQVQRLALTEIRPNPYQPRKTFDAEKLTELAQSIAQHGVLQPIIV-TQAIKGY 106
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
I+AGERR+RA+ A L+++P I++ + E+AI+EN+QR+DLN LEEA Y+QL+
Sbjct: 107 HIVAGERRYRASLEAGLTDIPAIVKPFSDGEMRELAIIENLQREDLNALEEAESYQQLMQ 166
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPL 206
TQ +I + +GKSR ++AN+LR+LKLP +R +IR+ ++S GH RTL + +
Sbjct: 167 HLTLTQQEIAARLGKSRPYIANMLRLLKLPVKIRTLIREGQLSGGHGRTLLALKTPETMV 226
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS 266
A++ + + SVR E+ V E ++ + + +K + E+++ + G ++
Sbjct: 227 HYAKLAIRESWSVRYLEQRVAEHTGSTQQATTRQQHTTKKPALIRQHEQQLKEQYGTSVE 286
Query: 267 IKHRNNKGQFCIKYETNEQLKIICSLLGE 295
I + N G+ + + + + LL
Sbjct: 287 ITTKKNVGEITFTFHSESDYRRLIQLLKN 315
>gi|242243293|ref|ZP_04797738.1| stage 0 DNA-binding protein [Staphylococcus epidermidis W23144]
gi|242233242|gb|EES35554.1| stage 0 DNA-binding protein [Staphylococcus epidermidis W23144]
gi|319399809|gb|EFV88057.1| stage 0 sporulation protein J [Staphylococcus epidermidis FRI909]
Length = 280
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 95/270 (35%), Positives = 155/270 (57%), Gaps = 4/270 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+S I++ I PNP+ PR FE E L DL SI+ HGI+QP+++R G Y ++
Sbjct: 12 NNDDSVQFIALELIRPNPYQPRKTFEEERLNDLASSIQQHGILQPIVLRQTVQGYYIVV- 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRA+K+A L+EVP II+ + ++ +E+AI+EN+QR+DLN +EEA Y++++++
Sbjct: 71 GERRFRASKLAGLTEVPAIIKELSDEDMMELAIIENLQREDLNAIEEAESYKKMMTDLNI 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQ 210
TQ ++ +GKSR ++AN+LR+L+LP +V +M++ +S H RTL S A+
Sbjct: 131 TQQEVARRLGKSRPYIANMLRLLQLPKNVAQMVQHGVLSSAHGRTLLTLKDASKIKKTAK 190
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+ SVR EE V +K K E K K + E+ + + G + I
Sbjct: 191 KAAQESWSVRYLEEYVNGLVSKDISMKLDKETKGSKPKMIQQQERFLKKQYGTKVDISTS 250
Query: 271 NNKGQFCIKYETNEQLKIICSLLGENDFEY 300
N G+ ++++ + K + L ++ EY
Sbjct: 251 KNVGKITFEFKSEAEFKRLIRQLNKDYMEY 280
>gi|120608767|ref|YP_968445.1| chromosome segregation DNA-binding protein [Acidovorax citrulli
AAC00-1]
gi|120587231|gb|ABM30671.1| chromosome segregation DNA-binding protein [Acidovorax citrulli
AAC00-1]
Length = 313
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 104/311 (33%), Positives = 170/311 (54%), Gaps = 20/311 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEK---KTETIPESQDCISIHSIVPNPHNPRNY 57
M+ K LGRGL AL+G + T P + +++ +VP + PR
Sbjct: 1 MATKKPK-GLGRGLEALLGPKVAEAAPGAEGGASTAAAPGAPSTLALDEMVPGIYQPRTR 59
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVII 113
+ L +L +SIK+ GI+QP++VR + G Y+IIAGERRFRAA++A L+EVPV++
Sbjct: 60 MDEGALYELAESIKAQGIMQPILVRRLAQGENAGRYEIIAGERRFRAARIAGLAEVPVLV 119
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
R V ++S+ +A++EN+QR+DLNPLEEA G +L+ E+G T VG+SRS +N+L
Sbjct: 120 REVPDESAAAMALIENIQREDLNPLEEAQGLARLVKEFGLTHEQAAQAVGRSRSAASNLL 179
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDN 231
R+L L V+ M+ +I +GHAR L+S + I ++K+SVR+ E LV++
Sbjct: 180 RLLNLAEPVQTMLMAGDIDMGHARALLSLDRAAQITAGNQIAARKLSVREAEGLVKKI-G 238
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-K--------GQFCIKYET 282
+ K + L +E+++S + + ++ + K G+ I++ +
Sbjct: 239 AEFSLAPQKARKEGKSRDLKRVEEELSDLLMAEVEVRVKKRVKRGGRTEEVGELAIQFGS 298
Query: 283 NEQLKIICSLL 293
E L + L
Sbjct: 299 LEALNGLIERL 309
>gi|148266267|ref|YP_001232973.1| parB-like partition protein [Geobacter uraniireducens Rf4]
gi|146399767|gb|ABQ28400.1| chromosome segregation DNA-binding protein [Geobacter
uraniireducens Rf4]
Length = 278
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 153/290 (52%), Gaps = 14/290 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LG+G+AAL+ E I I PN + PR F + LE
Sbjct: 2 VKKTGLGKGMAALLP-----------VVEEEGRKFFSCPIEEIRPNKNQPRKTFTHDKLE 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ GIIQPL+V + Y++IAGERR+RAA+ A L EVPV+I++V ++LE+
Sbjct: 51 ELAASIREKGIIQPLVV-LRKSDHYELIAGERRWRAAQKAGLREVPVVIQDVSEDTALEM 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +EEA Y L+ + +Q ++ VGK RS VAN LR+LKLPS ++
Sbjct: 110 ALIENIQREDLNAVEEAEAYHALLERFDLSQEELAKRVGKDRSTVANSLRLLKLPSEIKL 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ ++ +S+GHAR L++ + + + R E K K K+ + +
Sbjct: 170 DVIEDRLSMGHARALLTLDTLEQMKDAR--ETIIKRKLTVRATESLVKDMKANKVAKPKK 227
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + DL +++ I ++ G+ I Y ++L + L+
Sbjct: 228 QPDLQMVDLIEQMQRHFKTKIKVRQIGKGGKIEISYSDQKELTRLIDLIN 277
>gi|264676178|ref|YP_003276084.1| parB-like partition protein [Comamonas testosteroni CNB-2]
gi|262206690|gb|ACY30788.1| parB-like partition protein [Comamonas testosteroni CNB-2]
Length = 309
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 100/304 (32%), Positives = 167/304 (54%), Gaps = 17/304 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL+G + + ++++ +V + PR + L
Sbjct: 4 KKPKGLGRGLEALLGPKVSEAEQVAASGQQANL-PSSLALNVMVAGQYQPRTRMDEGALY 62
Query: 65 DLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+L +SIK+ GI+QP++VR + G Y+IIAGERRFRAA +A LSEVPV++R V +++
Sbjct: 63 ELAESIKAQGIMQPILVRQLSRGDNAGKYEIIAGERRFRAAHIAGLSEVPVLVREVPDEA 122
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR+DLNPLEEA G +L+ E+G T VG+SRS N+LR+L L
Sbjct: 123 AAAMALIENIQREDLNPLEEAQGLARLVKEFGLTHEQTAQAVGRSRSAATNLLRLLNLAE 182
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ M+ +I +GHAR L++ + I +KKMSVR+ E LV++ + +
Sbjct: 183 PVQTMLMAGDIDMGHARALLTLDRATQITAGNQIAAKKMSVREAESLVKKI-GAEFNLTR 241
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-----NK----GQFCIKYETNEQLKII 289
K + + +E+++S + ++ ++ + K G+ I++ + E+L I
Sbjct: 242 QKAKKDGKSRDVKRIEEELSDLLTADVEVRIKKTVRRHGKQQEMGEIAIQFGSLEELNGI 301
Query: 290 CSLL 293
L
Sbjct: 302 IEKL 305
>gi|116672707|ref|YP_833640.1| chromosome segregation DNA-binding protein [Arthrobacter sp. FB24]
gi|116612816|gb|ABK05540.1| chromosome segregation DNA-binding protein [Arthrobacter sp. FB24]
Length = 394
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 87/275 (31%), Positives = 143/275 (52%), Gaps = 6/275 (2%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR---AIDN 86
+ E I + I PN PR+ F+ + + +L S++ G++QP++VR
Sbjct: 119 ELVEVPGVRFAEIPVGDIHPNRKQPRSVFDEDDMAELIHSVREIGVLQPIVVRTSTEKGG 178
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
++++ GERR+RA + A L +P I+R+ + L A++EN+ R LNPLEEA Y+Q
Sbjct: 179 EPFELVMGERRWRAVQAAGLETIPAIVRDTTDDDLLRDALLENLHRSQLNPLEEAAAYQQ 238
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
L+ ++G T + +G+SR V+N LR+LKLP V+ + +S GHAR L++ D
Sbjct: 239 LLEDFGTTHEQLADRIGRSRPQVSNTLRLLKLPPLVQRRVAASVLSAGHARALLALPDAA 298
Query: 207 SL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
++ AQ IV++ MSVR TEE V + K + + L L +S ++
Sbjct: 299 AMERLAQKIVAEGMSVRATEEAVTLYQSPATPAKNNVPRPGARHERLDYLASSLSDRLDT 358
Query: 264 NISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
N+ I KG+ I++ + E L I +L
Sbjct: 359 NVKISLGARKGRVSIEFASVEDLNRIMEVLTPGSE 393
Score = 42.0 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP 36
MS+ +R LGRGL ALI + S + P
Sbjct: 1 MSD--KRRGLGRGLGALIPSSAPANASGNGAAPSRP 34
>gi|323487697|ref|ZP_08092955.1| stage 0 sporulation protein J [Planococcus donghaensis MPA1U2]
gi|323398431|gb|EGA91219.1| stage 0 sporulation protein J [Planococcus donghaensis MPA1U2]
Length = 277
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 168/290 (57%), Gaps = 18/290 (6%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL +T + + + I++ I NP+ PR F+ L++L
Sbjct: 3 KGLGKGINALFPG----------ETISDTDKVNQINVGEIQANPYQPRKIFDQVALDELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+SIK HGI+QP++VR Y+I+ GERRFRAAK L +VP II+++ ++ +E+AI+
Sbjct: 53 ESIKEHGILQPIVVRKAGEK-YEIVVGERRFRAAKSVKLKKVPAIIKDLSDQQMMELAIL 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL P+EEA Y++L+ TQ + +GKSR H+AN +R+L LP +VR++I
Sbjct: 112 ENLQREDLTPIEEAEAYQKLMEALSLTQEQLAFRLGKSRPHIANHIRLLSLPENVRKLIS 171
Query: 188 KEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+E+S+GH RTL S A+ +V + ++VR E LVQ + +
Sbjct: 172 DKELSMGHGRTLLGLRSKKLIPETAEKVVKENLNVRQLENLVQRLNE----NVPRETIEK 227
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+K+ ++ + + ++ + G + IK NKG+ I++ + + L+ I LL
Sbjct: 228 KKDIFIEEKQSELRDRFGTKVQIKKNKNKGKIEIEFFSEDDLERILELLS 277
>gi|320160801|ref|YP_004174025.1| chromosome partitioning protein ParB [Anaerolinea thermophila
UNI-1]
gi|319994654|dbj|BAJ63425.1| chromosome partitioning protein ParB [Anaerolinea thermophila
UNI-1]
Length = 284
Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 97/279 (34%), Positives = 152/279 (54%), Gaps = 18/279 (6%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
ALI + + + IH I PNP PR L++L +SI+ HG+
Sbjct: 13 ALIPGESPQSE----------GGVISLPIHQIKPNPRQPRTEINEAHLQELAESIREHGV 62
Query: 76 IQPLIVRAIDNGL-YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
+QP++V Y ++AGERR RAA+MA L +P IIR+V + LE+A++EN+QR+D
Sbjct: 63 LQPVLVTTEPGKDGYYLVAGERRLRAAQMAGLELIPAIIRSVSEQERLELALIENLQRED 122
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
L+PLE A Y++L+ E+G DI VGKSR V+N LR+L L + V++ ++ +IS G
Sbjct: 123 LSPLETAEAYQKLVEEFGLRHEDIAIRVGKSREAVSNTLRLLNLSAEVKKALQSGQISEG 182
Query: 195 HARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
HAR L+ +L +VI+ + ++VR TEELV++ + R L
Sbjct: 183 HARALLGLPHEAAQNALLKVILEQGLTVRQTEELVRKMSG----ERPQKRRKRGLSPELQ 238
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
+ E+++ S+ G +SI+H G I Y + E+ +
Sbjct: 239 EYEEQLRSRFGTKVSIRHGQKGGAIVIYYFSEEEFDHLL 277
>gi|94987257|ref|YP_595190.1| transcriptional regulator [Lawsonia intracellularis PHE/MN1-00]
gi|94731506|emb|CAJ54869.1| predicted transcriptional regulators [Lawsonia intracellularis
PHE/MN1-00]
Length = 319
Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 102/314 (32%), Positives = 159/314 (50%), Gaps = 20/314 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPE----SQDCISIHSIVPNPHNPRN 56
M+ R LGRGL L G + ++ K + S + I + P+ PR
Sbjct: 1 MATQE--RGLGRGLDILFGNTSPEVEQDHIKKHSKDGLVLPSITKLPIAILRPSSSQPRK 58
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAI---DNGLYKIIAGERRFRAAKMASLSEVPVII 113
F+ LE+L SIK+ G++QP++VR + Y+I+AGERR+RAAK+A L +VPV I
Sbjct: 59 SFDKNALEELVLSIKNQGVVQPILVRPYREQSSIRYEIVAGERRWRAAKLAGLVDVPVYI 118
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
+ ++++ L IA++EN+QR+DLNP+EEAL E L + +Q+++ +G+SRS +AN L
Sbjct: 119 KELNDEDVLTIALIENLQREDLNPIEEALAIESLRKKLSLSQDELAHRLGRSRSAIANTL 178
Query: 174 RILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
R+L L V+E + IS GHAR L L + I ++SVRD E V
Sbjct: 179 RLLHLTPEVQEGLCNHTISSGHARALLALSDMELQQVLYKAICCNQLSVRDVETSVTYWK 238
Query: 231 NKKEKRKKI--------FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYET 282
I +E+ + L ++ + + ++I G+ I Y++
Sbjct: 239 KNGVLPPSISGITKDTVKVKQKERSERLKNVVNTLRFNLHPKVTISGSECMGRITIPYDS 298
Query: 283 NEQLKIICSLLGEN 296
EQ I LG N
Sbjct: 299 QEQFTTILLKLGIN 312
>gi|313673265|ref|YP_004051376.1| parb-like partition protein [Calditerrivibrio nitroreducens DSM
19672]
gi|312940021|gb|ADR19213.1| parB-like partition protein [Calditerrivibrio nitroreducens DSM
19672]
Length = 280
Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 112/291 (38%), Positives = 170/291 (58%), Gaps = 21/291 (7%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRGL +LI + + +S + I IVPN PR FE E L++
Sbjct: 3 KKSPLGRGLDSLIPKSADT------------KSVLEVDIDEIVPNKEQPRVSFEEEKLKE 50
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSLEI 124
L SIK GIIQPLIV + Y+IIAGERR+RAA MA L +VPVI+++ +++ LE+
Sbjct: 51 LANSIKEKGIIQPLIVTNVGGR-YQIIAGERRWRAAGMAGLKKVPVIVKSVENDREKLEL 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+E A Y+ LI +Y YTQ + IVGK+RS VAN LRIL L + E
Sbjct: 110 ALIENLQREDLNPVEVAKAYKLLIEKYDYTQEQLAQIVGKNRSTVANSLRILNLHPKIIE 169
Query: 185 MIRKEEISLGHARTLVSTSDPL--SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ + I+ GHAR+L+ + + Q I+ K ++VR+ E+LV+ +N K
Sbjct: 170 ALSQNLITEGHARSLIGLESSVALQVLQKIIDKGLTVREVEKLVKNINN-----PKRLNE 224
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+R + ++ ++K++ I IK G+ + Y++NE+L I +++
Sbjct: 225 NRGNDLFIESIKKEMEEIFKTKIQIKPARKGGKIELIYKSNEELNTILAII 275
>gi|323144400|ref|ZP_08079008.1| ParB-like protein [Succinatimonas hippei YIT 12066]
gi|322415853|gb|EFY06579.1| ParB-like protein [Succinatimonas hippei YIT 12066]
Length = 301
Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 110/298 (36%), Positives = 175/298 (58%), Gaps = 12/298 (4%)
Query: 9 RLGRGLAALIGEVNQSIDSPEKK--------TETIPESQDCISIHSIVPNPHNPRNYFES 60
LGRGL AL+ E E + + + + ++P+P+ PR F+S
Sbjct: 3 GLGRGLNALLSESKARAQREENILLSQQREFKTELKNTVLNLKLDCLIPSPYQPRQNFDS 62
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L SIK HG+++PL+V++ D+G Y+II GERR+RAAK+A LSEVP ++R+V K+
Sbjct: 63 EALNELALSIKEHGLLEPLLVKSKDDGKYEIICGERRYRAAKIAGLSEVPCLVRDVLEKN 122
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ IA++EN+QRKDLNPLE+A Q++ E TQ D+ +GKSRS V NILR+ +L
Sbjct: 123 AYAIALIENIQRKDLNPLEQASALLQMMKECSLTQEDLAKTLGKSRSSVTNILRLNQLNE 182
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+V++ + I +GHA+ + + + A+++VSK ++VR TE ++E ++ +K
Sbjct: 183 NVKKFLLDGSIEMGHAKAILSLDSELQEKAAKIVVSKGLNVRQTEAFIKELKDESDKDLG 242
Query: 239 IFEGSREKEKYLTDLEKKISSKV-GLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ EK D EK ++S + G + N KG+ + Y++ EQL+ I L G
Sbjct: 243 SSKAKFEKSAMYKDWEKALNSSLHGALVKFTPQSNEKGKVVLSYKSKEQLEAIIKLFG 300
>gi|314935007|ref|ZP_07842366.1| spoOJ protein [Staphylococcus caprae C87]
gi|313652937|gb|EFS16700.1| spoOJ protein [Staphylococcus caprae C87]
Length = 276
Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 88/274 (32%), Positives = 160/274 (58%), Gaps = 4/274 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ + ++ E ++I I PNP+ PR F+ + L+DL +SI+ HGI+QP+++R
Sbjct: 2 TQNDDQRLQLERDEQVQHVAIGLIKPNPYQPRKAFDEDKLQDLAKSIQQHGILQPIVIRE 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G Y ++ GERRFRA+++ L +P I++ + ++ +E+AI+EN+QR+DLN +EEA
Sbjct: 62 TIQGYYIVV-GERRFRASQIVGLESIPAIVKKLSDEDMMELAIIENLQREDLNAIEEAES 120
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---V 200
Y++L+S+ TQ ++ +GKSR ++AN+LR+L LPS++ +M+R+ E+S H RTL
Sbjct: 121 YKKLMSDLKITQQEVARRLGKSRPYIANMLRLLHLPSAIMKMVREGELSGAHGRTLLSLK 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
+ + + V + SVR E+ V + E K + + +K K++ E+ + +
Sbjct: 181 DEALMKKVGKEAVRESWSVRQLEQYVNTYLQEGESNAKPKQANNKKPKFIQQQERLLKEQ 240
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
G + I N G+ ++++ ++ K I L
Sbjct: 241 YGSKVEISTSKNIGKITFEFKSEDEFKRIIQQLN 274
>gi|300742664|ref|ZP_07072685.1| ParB family protein [Rothia dentocariosa M567]
gi|300381849|gb|EFJ78411.1| ParB family protein [Rothia dentocariosa M567]
Length = 365
Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 83/274 (30%), Positives = 146/274 (53%), Gaps = 7/274 (2%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA---IDNGL 88
I + I PN PR F+ + + +L S++ G++QP++VR +
Sbjct: 91 VPVPGAQFAEIKVSDIHPNRKQPRVDFDEQDMAELIHSVREIGVLQPIVVRPSREKNAEK 150
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+++ GERR+RA + A L +P IIR+ + L A++EN+ R LNP+EEA Y+QL+
Sbjct: 151 YELVMGERRWRATQAAGLETIPAIIRDTQDIDLLRDALLENLHRSQLNPIEEAAAYQQLM 210
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDP 205
E+ TQ + +G+SR ++N +R+L+LP V+ + I+ GHAR TL +
Sbjct: 211 EEFSTTQEQLAKRIGRSRPQISNTIRLLRLPPLVQRRVAAGVIAAGHARALLTLTDQAKI 270
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
++AQ IV++ +SVR EELV ++++ ++ + L + + K+ ++
Sbjct: 271 ETIAQKIVNEGLSVRAVEELVAHASEAPAEKERKTPQPQKHHERLDYIADAFADKLDTSV 330
Query: 266 SIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
I KG+ I++ E L I +L ++DF+
Sbjct: 331 KISLGARKGKMTIEFANVEDLNRIIRVL-DSDFK 363
>gi|74318823|ref|YP_316563.1| chromosome segregation DNA-binding protein [Thiobacillus
denitrificans ATCC 25259]
gi|74058318|gb|AAZ98758.1| chromosome partitioning protein ParB [Thiobacillus denitrificans
ATCC 25259]
Length = 284
Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 94/294 (31%), Positives = 163/294 (55%), Gaps = 17/294 (5%)
Query: 5 YSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+K + LGRGL AL+ E +++ + P + PR+ +SE L
Sbjct: 1 MAKLKGLGRGLDALLAG--------EDNAAPPQGDLRMMAVSHLAPGKYQPRSQMDSESL 52
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
++L SI++ G++QP++VR + G Y+IIAGERR+RAA++A L+EVPV++R V + +
Sbjct: 53 QELADSIRAQGLMQPILVREV-TGGYEIIAGERRWRAAQLAGLAEVPVLLREVPDNAVAA 111
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+A++EN+QR+DLN ++EA G ++LI E+G T + + VGKSR+ V+N+LR+L L V+
Sbjct: 112 MALIENIQREDLNAIDEAHGLQRLIQEFGMTHDAVAQAVGKSRAAVSNLLRLLNLSRPVQ 171
Query: 184 EMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+M+ I +GHAR L+ LA I ++ +SVR+ E V +
Sbjct: 172 DMLVAGLIEMGHARALLPLHAGAQRELAHEIETRGLSVREVERRVARLKD----ADAAPP 227
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ LE+ +S + + ++ R G+ +++ + + L+ + LG
Sbjct: 228 AKPRVSRDTLRLEEALSDALAMTARVQADRKGGGKLTLQFGSFDALQGLLQRLG 281
>gi|302535581|ref|ZP_07287923.1| ParB [Streptomyces sp. C]
gi|302444476|gb|EFL16292.1| ParB [Streptomyces sp. C]
Length = 360
Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 87/282 (30%), Positives = 147/282 (52%), Gaps = 7/282 (2%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPR--NYFESEGLEDLCQSIKSHGIIQPLI 80
+ E + + +++I PNP PR + + + L +L SI++ G++QP++
Sbjct: 68 EVAAVEPASKEVAGATFAELPLNAISPNPKQPRNMKHLDEDALAELVTSIQTVGLLQPVV 127
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR + G Y++I GERRFRA +A L +P IIR D+ L A++EN+ R LNPLEE
Sbjct: 128 VRETEPGRYELIMGERRFRACGLAGLESIPAIIRATDDDKLLLDALLENLHRVQLNPLEE 187
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+QL+ E+ T + + +G+SR V N LR+L+L V+ + + GHAR LV
Sbjct: 188 AAAYDQLLKEFNCTHDQLADRIGRSRPQVTNTLRLLRLSPDVQLKVASGVLLAGHARALV 247
Query: 201 ---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF--EGSREKEKYLTDLEK 255
+ L LA+ IV++ +SVR EE++Q ++ K L++L
Sbjct: 248 SVEDFGEQLRLAERIVAEGLSVRSVEEIIQLMGSEPSSTVKPKGPRAGARVSPALSELAT 307
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++S + + + KG+ +++ + E L+ I L +
Sbjct: 308 RLSDRFETRVKVDLGQKKGKITVEFASMEDLERILGTLAPGE 349
>gi|283797204|ref|ZP_06346357.1| stage 0 sporulation protein J [Clostridium sp. M62/1]
gi|291075166|gb|EFE12530.1| stage 0 sporulation protein J [Clostridium sp. M62/1]
gi|295090262|emb|CBK76369.1| ParB-like partition proteins [Clostridium cf. saccharolyticum K10]
Length = 364
Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 98/279 (35%), Positives = 159/279 (56%), Gaps = 4/279 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E ++ EK + +SI I PN PR YF + L +L +S+K+ GI+QPL
Sbjct: 84 ETVRAEGKAEKTERQGNGREQLVSIAQIEPNQEQPRKYFNEDQLNELAESVKNFGILQPL 143
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+V+ Y+IIAGERR+RAAK+A L EVPV+IR+ + +LEIA++ENVQR DLNP+E
Sbjct: 144 LVQRKG-EFYEIIAGERRWRAAKLAGLKEVPVLIRDYTKQQTLEIALIENVQRADLNPIE 202
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+ L+ E+G Q ++ V K+R+ + N +R+LKL V++M+ + IS GHAR L
Sbjct: 203 EAKAYQMLVQEFGLKQEEVAERVSKNRATITNSMRLLKLDERVQQMLVENLISGGHARAL 262
Query: 200 VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE--KYLTDLEKKI 257
+ D ++ + + ++ + +K+ + E++ D+E+K+
Sbjct: 263 LGLEDKEQQYELAKKVRENQLSVRQVEKLVKMMTAPKKEKKADTEERDLSFIYRDIEEKL 322
Query: 258 SSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGE 295
S +G ++I + NKG+ I+Y + +L+ I LL
Sbjct: 323 KSVMGTKVTINKKDKNKGRIEIEYYSPAELERIVELLQS 361
>gi|220914662|ref|YP_002489971.1| parB-like partition protein [Arthrobacter chlorophenolicus A6]
gi|219861540|gb|ACL41882.1| parB-like partition protein [Arthrobacter chlorophenolicus A6]
Length = 438
Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 94/287 (32%), Positives = 147/287 (51%), Gaps = 14/287 (4%)
Query: 13 GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
GL A D+ E IS+ I PN PR+ F+ + + +L S++
Sbjct: 154 GLGA--------SDNGADLVEVPGAHFAEISVTDIHPNRKQPRSVFDEDDMAELVHSVRE 205
Query: 73 HGIIQPLIVRA---IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
G++QP++VR Y+++ GERR+RA + A L VP I+R + L A++EN
Sbjct: 206 IGVLQPIVVRKSTEDGVEPYELVMGERRWRAVQAAGLDTVPAIVRETTDDDLLRDALLEN 265
Query: 130 VQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
+ R LNPLEEA Y+QL+ ++G T + +G+SR V+N LR+LKLP V+ +
Sbjct: 266 LHRSQLNPLEEAAAYQQLLEDFGTTHEQLADRIGRSRPQVSNTLRLLKLPPLVQRRVAAG 325
Query: 190 EISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+S GHAR L++ D ++ AQ IV++ MSVR TEE V + K +
Sbjct: 326 VLSAGHARALLALPDAAAMERLAQKIVAEGMSVRATEEAVTLYQDPATPAKNNVPRPGAR 385
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ L L +S ++ N+ I KG+ I++ + E L I +L
Sbjct: 386 HERLDYLASSLSDRLDTNVKISLGVRKGKVSIEFASVEDLNRIMDVL 432
Score = 40.0 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP 36
MS +R LGRGL ALI S + P
Sbjct: 1 MSE--KRRGLGRGLGALIPSSGASNGQGNGAAASRP 34
>gi|317499283|ref|ZP_07957556.1| ParB-like partition protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893452|gb|EFV15661.1| ParB-like partition protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 306
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 172/304 (56%), Gaps = 14/304 (4%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPES------------QDCISIHSIVPN 50
+ K LGRGL LI + + ++ + + + I I PN
Sbjct: 1 MSAKKMGLGRGLNTLIPKAPIVDEEDVEQVKKKVSRSSKTKKKEETKKELTLPIDKIEPN 60
Query: 51 PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
P PRN F+ + L++L SIK +G++QP++V D Y+IIAGERR+RAAK A L+EVP
Sbjct: 61 PDQPRNQFDEDTLQELADSIKQYGMLQPILVTPKD-DFYEIIAGERRWRAAKQAGLNEVP 119
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
V+IR + +EIA++EN+QR +LNP+EEA+ Y++L+ E+ Q+++ + V KSR+ +
Sbjct: 120 VMIRKYNENEIVEIALIENIQRDNLNPIEEAMAYKRLMEEFELKQDEVATKVSKSRASIT 179
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
N LR+LKL V++M+ +E IS GHAR L++ S+ ++ ++ +
Sbjct: 180 NSLRLLKLDPRVQKMLEEEMISTGHARALLAISNKDKQYEIAQKVFDEKLSVRDIEKLVK 239
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKII 289
+ K+ +K E + T+LE+ + +G +SI +NNKG+ I+Y + ++L+ I
Sbjct: 240 DLKKIQKNKKEEKDVHDFLYTELEESMKQILGSKVSIKNKKNNKGKIEIEYYSRDELERI 299
Query: 290 CSLL 293
++
Sbjct: 300 VDMI 303
>gi|116329824|ref|YP_799542.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116123513|gb|ABJ74784.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 291
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 109/299 (36%), Positives = 167/299 (55%), Gaps = 14/299 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL LI ++ + + I I I PNP PR F
Sbjct: 1 MA--IKPKALGRGLGNLIP----VNENKTPIHFSAEGALREIRISEIRPNPSQPRKTFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L ++IK+HG+IQP++V+ +D G Y+II+GERR+RA K+A ++P I++NV
Sbjct: 55 ESLRELSETIKAHGVIQPIVVKQLDVG-YEIISGERRYRACKLAGFVKIPAIVKNVSENQ 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
S+E+AI+EN+QR+DLNP+EEA+ Y+ L + DI + VGK+RS ++N++R+L+LP
Sbjct: 114 SMEMAIIENIQREDLNPIEEAIAYKTLSEKLNLKITDISTRVGKNRSTISNLIRLLQLPD 173
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
SV+++I+ IS GHAR L LA I K ++ R E+LV ++
Sbjct: 174 SVQDLIKNGRISEGHARPLLSLADKKKIEQLAYQIAEKGLTARQVEDLVSNLTEERSSV- 232
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLLG 294
+ K+ + +LE K K + I I H N KG+ I Y E ++ I + LG
Sbjct: 233 -PEKKKSRKDVNIVELENKFRKKYSMKIEISHNQNSGKGKMAIVYPNLEAMEKILNALG 290
>gi|224370269|ref|YP_002604433.1| putative chromosome partitioning protein ParB [Desulfobacterium
autotrophicum HRM2]
gi|223692986|gb|ACN16269.1| putative chromosome partitioning protein ParB [Desulfobacterium
autotrophicum HRM2]
Length = 289
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 110/297 (37%), Positives = 169/297 (56%), Gaps = 14/297 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS LGRG++ALI ++ + + + I IVPN PR F
Sbjct: 1 MSKKKKLTGLGRGISALIPDL--------EAMDENTGNFFMCKIEEIVPNRFQPRINFVE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE L +SI GI+QPL+VR + Y++IAGERR RAA+ A + VP ++R++ ++
Sbjct: 53 EELEKLKESIIEQGILQPLLVRRNSDT-YELIAGERRLRAAQRAKFTHVPALVRDLTDEQ 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE++I+EN+QR++LNPLEEA Y +LISE+ YTQ + +GK+RS +AN+LR+ LP
Sbjct: 112 MLEVSIIENIQRQELNPLEEAEAYHRLISEFNYTQEKVARRIGKNRSTIANLLRLRGLPD 171
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
++ + + K EIS GHAR ++ S + + + +V K++SVR TE+LVQ E
Sbjct: 172 AIHQSLAKHEISTGHARAILGAGSEENQIKVWLRVVEKELSVRATEQLVQRIKA--ETDM 229
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ L +SSK+ + IKHR + G+F I ++T E+ + + L
Sbjct: 230 PSTPPPIVQNDEFDRLSSTLSSKINSTVKIKHRGDGGRFEIGFKTREEFQRLVELFN 286
>gi|157803244|ref|YP_001491793.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
[Rickettsia canadensis str. McKiel]
gi|157784507|gb|ABV73008.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
[Rickettsia canadensis str. McKiel]
Length = 286
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 104/302 (34%), Positives = 176/302 (58%), Gaps = 24/302 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGL++L+GE SI+S + I + PN + PR FE
Sbjct: 1 MAKN---KGLGRGLSSLLGEEVISIESEIIQIINIDKI---------RPNENQPRKNFEY 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +++L SI ++G++QP+IV + ++IIAGERR+RA K+A + E+PVII+N+D K
Sbjct: 49 DKIKELADSILNNGLLQPIIV----DNNFQIIAGERRWRACKLAKVLEIPVIIKNLDAKE 104
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
S+EIA++EN+QR DL +EEA G++ L+ + YT + +GKSRSH+AN+LR+ LP
Sbjct: 105 SVEIALIENIQRTDLTVMEEARGFKYLVDNFNYTVEKLAERLGKSRSHIANLLRLNNLPQ 164
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
S+++ + + +S+G AR L++ ++A I++ ++VR TE+LV++ +
Sbjct: 165 SIQDKVNENILSMGQARCLINHEHAEAIADYIINNNLNVRQTEKLVRQWYKNDYTKFPKN 224
Query: 241 EGSREK--------EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
K + L L K +S K G+ I+I++ + G+ Y+ ++L +I
Sbjct: 225 NNKVGKPFLKDSTTDNDLELLAKALSEKFGIKITIENCSLGGKLIFHYKDLKELDLILLQ 284
Query: 293 LG 294
L
Sbjct: 285 LN 286
>gi|311112580|ref|YP_003983802.1| chromosome segregation DNA-binding protein [Rothia dentocariosa
ATCC 17931]
gi|310944074|gb|ADP40368.1| chromosome segregation DNA-binding protein [Rothia dentocariosa
ATCC 17931]
Length = 490
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 83/274 (30%), Positives = 145/274 (52%), Gaps = 7/274 (2%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA---IDNGL 88
I + I PN PR F+ + + +L S++ G++QP++VR
Sbjct: 216 VPVPGAQFAEIKVSDIHPNRKQPRVDFDEQDMAELIHSVREIGVLQPIVVRPSREKGAEK 275
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+++ GERR+RA + A L +P IIR+ + L A++EN+ R LNP+EEA Y+QL+
Sbjct: 276 YELVMGERRWRATQAAGLETIPAIIRDTQDIDLLRDALLENLHRSQLNPIEEAAAYQQLM 335
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDP 205
E+ TQ + +G+SR ++N +R+L+LP V+ + I+ GHAR TL +
Sbjct: 336 EEFSTTQEQLAKRIGRSRPQISNTIRLLRLPPLVQRRVAAGVIAAGHARALLTLTDQAKI 395
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
++AQ IV++ +SVR EELV ++++ ++ + L + + K+ ++
Sbjct: 396 ETIAQKIVNEGLSVRAVEELVAHASEAPAEKERKTPQPQKHHERLDYIADAFADKLDTSV 455
Query: 266 SIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
I KG+ I++ E L I +L ++DF+
Sbjct: 456 KISLGARKGKMTIEFANVEDLNRIIRVL-DSDFK 488
Score = 40.0 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPES 38
M+ +R LGRGL ALI + + E E
Sbjct: 1 MAE--KRRGLGRGLGALIPNNTTPVVTASDVAEKEAEK 36
>gi|167766876|ref|ZP_02438929.1| hypothetical protein CLOSS21_01393 [Clostridium sp. SS2/1]
gi|167711424|gb|EDS22003.1| hypothetical protein CLOSS21_01393 [Clostridium sp. SS2/1]
gi|291558415|emb|CBL37215.1| ParB-like partition proteins [butyrate-producing bacterium SSC/2]
Length = 306
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 104/306 (33%), Positives = 173/306 (56%), Gaps = 16/306 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPES------------QDCISIHSIV 48
MS K LGRGL LI + + ++ + + + I I
Sbjct: 1 MS--AKKMGLGRGLNTLIPKAPIVDEEDVEQVKKKVSRSSKTKKKEETKKELTLPIDKIE 58
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
PNP PRN F+ + L++L SIK +G++QP++V D Y+IIAGERR+RAAK A L+E
Sbjct: 59 PNPDQPRNQFDEDTLQELADSIKQYGMLQPILVTPKD-DFYEIIAGERRWRAAKQAGLNE 117
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
VPV+IR + +EIA++EN+QR +LNP+EEA+ Y++L+ E+ Q+++ + V KSR+
Sbjct: 118 VPVMIRKYNENEIVEIALIENIQRDNLNPIEEAMAYKRLMEEFELKQDEVATKVSKSRAS 177
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
+ N LR+LKL V++M+ +E IS GHAR L++ S+ ++ ++ +
Sbjct: 178 ITNSLRLLKLDPRVQKMLEEEMISTGHARALLAISNKDKQYEIAQKVFDEKLSVRDIEKL 237
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLK 287
+ K+ +K E + T+LE+ + +G +SI +NNKG+ I+Y + ++L+
Sbjct: 238 VKDLKKIKKNKKEEKDVHDFLYTELEESMKQILGSKVSIKNKKNNKGKIEIEYYSRDELE 297
Query: 288 IICSLL 293
I ++
Sbjct: 298 RIVDMI 303
>gi|237786648|ref|YP_002907353.1| chromosome partitioning protein ParB [Corynebacterium
kroppenstedtii DSM 44385]
gi|237759560|gb|ACR18810.1| chromosome partitioning protein ParB [Corynebacterium
kroppenstedtii DSM 44385]
Length = 476
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 88/284 (30%), Positives = 151/284 (53%), Gaps = 6/284 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E S E + + I++I+ N NPR F+ E L +L SI+ G++QP+
Sbjct: 167 EGQSENTSQEPLISDETATYRELPINAIIRNEKNPRQDFDQEALRELAHSIREFGLLQPI 226
Query: 80 IVRA-IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+VR + G +++I GERR RAA++A L +P I+R D+ + L A++EN+ R LNPL
Sbjct: 227 VVRQASEPGKFELIMGERRLRAAQLADLEAIPSIVREADDDTMLRDALLENIHRVQLNPL 286
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EE Y+QL+ E+G TQ + + +G+SR ++N +R+L+LP V+ + +S GHAR
Sbjct: 287 EEGAAYQQLLEEFGVTQAQLATRLGRSRPVISNTIRLLQLPLPVQRRVAAGVLSAGHARA 346
Query: 199 LVS----TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY-LTDL 253
L+ + LA+ IV++ +SVR TEE V + + + KK + + +T
Sbjct: 347 LMGVTQGPDAQIKLAERIVAEGLSVRATEEAVTLINRGENEPKKKEPRAPRPQPEKMTHW 406
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ N+ ++ KG+ +++ E I ++L +
Sbjct: 407 ADTFGDYLDTNVKVQMGAKKGKIVVEFAGMEDFDRIIAMLKTQE 450
Score = 40.4 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD 40
M+ K LG+GLA+LI + I +
Sbjct: 1 MAEAKRKSGLGKGLASLIPTGPAKPQIGNDAADVIFGANR 40
>gi|255321973|ref|ZP_05363123.1| stage 0 sporulation protein J [Campylobacter showae RM3277]
gi|255301077|gb|EET80344.1| stage 0 sporulation protein J [Campylobacter showae RM3277]
Length = 284
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 101/296 (34%), Positives = 175/296 (59%), Gaps = 14/296 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL A++G+V + + + E E I + I NP+ PR F+
Sbjct: 1 MA---KKGGLGRGLEAILGDVELAYKA--EINEGNSEIIKEIDLELITENPYQPRKNFDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L +SIK HG+IQP+IV D+G Y +IAGERRFRA K+ S++ I+ +++++S
Sbjct: 56 TALRELSESIKRHGLIQPIIVIEKDSG-YMLIAGERRFRATKLLGESKIKAIVADIESQS 114
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNP+E A Y++LI EY TQ+ + +I+ KSR + N +R+L L +
Sbjct: 115 LRELALIENIQREDLNPIELANSYKELIDEYKITQDGLANIIHKSRVQITNTMRLLSLSA 174
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+E I++ +++ GHA+ +V +D + I+ +++SVR+TE LV+ NK +
Sbjct: 175 VTQEYIKEGKLTQGHAKVIVGLEPNDEKTAVDTIIGQRLSVRETENLVKNLKNKLPPKTA 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ R E+ LT+L++ S K + + IK + + I+++ + + + +
Sbjct: 235 LKLDDRYLER-LTNLKEIFS-KFDVPVKIKGK----KITIEFDDIADIDRLINKIK 284
>gi|15808976|gb|AAL08578.1|AF418548_4 ParA [Mycobacterium avium subsp. paratuberculosis]
Length = 264
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 85/256 (33%), Positives = 143/256 (55%), Gaps = 8/256 (3%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG----LYKIIAGERRFRAA 101
I NP PR F+ E L +L SI+ G++QP++VRAI Y+I+ GERR+RAA
Sbjct: 4 DIERNPRQPRQVFDEEALAELVHSIREFGLLQPIVVRAIKESASGARYQIVMGERRWRAA 63
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
+ A L+ +P I+R + + L A++EN+ R LNPLEEA Y+QL+ E+G T +++ +
Sbjct: 64 QEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVTHDELAAR 123
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS----TSDPLSLAQVIVSKKM 217
+G+SR + N++R+LKLP +V+ + +S GHAR L+S LA IV++ +
Sbjct: 124 IGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEELATRIVAEGL 183
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
SVR TEE V + + L D+ ++S+ +++ KG+
Sbjct: 184 SVRATEEAVTLANRAGTTTPTPPRRKPIQMPGLQDVADRLSTAFDTRVTVSLGKRKGKIV 243
Query: 278 IKYETNEQLKIICSLL 293
+++ + + L+ I ++
Sbjct: 244 VEFGSVDDLQRIIDVM 259
>gi|314930935|gb|EFS94766.1| ParB-like partition protein [Propionibacterium acnes HL067PA1]
Length = 308
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 97/309 (31%), Positives = 165/309 (53%), Gaps = 15/309 (4%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M+ LGRG L + S D + IS+ I P
Sbjct: 1 MTVAAKHSGLGRGFGELFQRTDLDDDDEERVDDASTDRDAINERVGGSRLELISVDEISP 60
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N PR F E L +L +SI++ G++QP++V DNG Y+++ GERR+RAA+ A L+ V
Sbjct: 61 NARQPRKMFNEEELTELSESIRAVGVLQPVVVTPADNG-YELVMGERRWRAARKAGLATV 119
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 120 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQI 179
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + EI+ GHAR L++ +P A +V + +SVR TEELV
Sbjct: 180 ANTIRLLKLSADVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELV 239
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
++ + + K ++ L +++S + + ++ RN +G + NE+L
Sbjct: 240 RQTLDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEEL 299
Query: 287 KIICSLLGE 295
+ + + +
Sbjct: 300 ERLIDIFSD 308
>gi|327456294|gb|EGF02949.1| ParB-like partition protein [Propionibacterium acnes HL083PA2]
Length = 308
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 165/309 (53%), Gaps = 15/309 (4%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M+ LGRG L + S D + IS+ I P
Sbjct: 1 MTVAAKHSGLGRGFGELFQRTDLDDDDEERVDDASTDGDAINERVGGSRLELISVDEISP 60
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N PR F E L +L +SI++ G++QP++V DNG Y+++ GERR+RAA+ A L+ V
Sbjct: 61 NARQPRKMFNEEELTELSESIRAVGVLQPVVVTPADNG-YELVMGERRWRAARKAGLATV 119
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 120 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQI 179
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + EI+ GHAR L++ +P A +V + +SVR TEELV
Sbjct: 180 ANTIRLLKLSADVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELV 239
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
+E + + K ++ L +++S + + ++ RN +G + NE+L
Sbjct: 240 RETLDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEEL 299
Query: 287 KIICSLLGE 295
+ + + +
Sbjct: 300 ERLIDIFSD 308
>gi|284035176|ref|YP_003385106.1| parB-like partition protein [Spirosoma linguale DSM 74]
gi|283814469|gb|ADB36307.1| parB-like partition protein [Spirosoma linguale DSM 74]
Length = 304
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 93/280 (33%), Positives = 159/280 (56%), Gaps = 5/280 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + IS+ I NP PR F+ E L++L SI++ GIIQP+
Sbjct: 24 DSESVSRQTKPSPFESISTMTEISVTLIETNPFQPRTRFDEEALQELADSIRTQGIIQPI 83
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
VR + Y++IAGERR +A+K+A L+ +P +R +++ LE+A++EN+QR++LN +E
Sbjct: 84 TVRQLGKERYQLIAGERRLQASKIAGLTHIPAYVRTANDQQMLEMALIENIQRENLNAIE 143
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
AL Y++LI+E Q ++G VGK+R+ V N +R+LKLP ++ +R +IS+GHAR +
Sbjct: 144 IALSYQRLITECSLKQEELGERVGKNRTTVNNYIRLLKLPPVIQASLRDNKISMGHARAI 203
Query: 200 VSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
++ +P + V ++ SVR EE V+ + ++ + K+ + L+ K
Sbjct: 204 INIENPDAQIRLFTRAVDEEWSVRKVEEAVRNLSEESQETVSTRRVTLPKQ-EMRSLQFK 262
Query: 257 ISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+SS G +SIK +KG+ I + + E+L I +L
Sbjct: 263 LSSLFGTRVSIKADEKHKGEIKIPFTSQEELTKILEVLNS 302
>gi|57865977|ref|YP_187638.1| spoOJ protein [Staphylococcus epidermidis RP62A]
gi|57636635|gb|AAW53423.1| spoOJ protein [Staphylococcus epidermidis RP62A]
Length = 280
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 96/270 (35%), Positives = 156/270 (57%), Gaps = 4/270 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+S I++ I PNP+ PR FE E L DL SI+ HGI+QP+++R G Y ++
Sbjct: 12 NNDDSVQFIALELIRPNPYQPRKTFEEERLNDLASSIQQHGILQPIVLRQTVQGYYIVV- 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRA+K+A L+EVP II+ + ++ +E+AI+EN+QR+DLN +EEA Y++++++
Sbjct: 71 GERRFRASKLAGLTEVPAIIKELSDEDMMELAIIENLQREDLNAIEEAESYKKMMTDLNI 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQ 210
TQ ++ +GKSR ++AN+LR+L+LP +V +M++ +S H RTL S A+
Sbjct: 131 TQQEVARRLGKSRPYIANMLRLLQLPKNVAQMVQHGALSSAHGRTLLTLKDASKIKKTAK 190
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+ SVR EE V +K RK E K K + E+ + + G + I
Sbjct: 191 QAAQESWSVRYLEEYVNGLVSKDISRKVDKETKESKPKMIQQQERFLKKQYGAKVDISTS 250
Query: 271 NNKGQFCIKYETNEQLKIICSLLGENDFEY 300
N G+ ++++ + K + L ++ EY
Sbjct: 251 KNVGKITFEFKSEAEFKRLIRQLNKDYKEY 280
>gi|323486765|ref|ZP_08092084.1| stage 0 sporulation protein J [Clostridium symbiosum WAL-14163]
gi|323694907|ref|ZP_08109057.1| stage 0 sporulation protein J [Clostridium symbiosum WAL-14673]
gi|323399904|gb|EGA92283.1| stage 0 sporulation protein J [Clostridium symbiosum WAL-14163]
gi|323500997|gb|EGB16909.1| stage 0 sporulation protein J [Clostridium symbiosum WAL-14673]
Length = 356
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 106/282 (37%), Positives = 166/282 (58%), Gaps = 6/282 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
++ +K E + ++I I PN PR F+ E L +L SIK++G++QP
Sbjct: 73 PAAKKTTKPVQKVKIVEVEKEKFLNITKIEPNSSQPRKMFDEEQLNELANSIKAYGVLQP 132
Query: 79 LIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
L+V+ Y+IIAGERR+RAAK+A L EVPVIIR + ++EIA++ENVQR+DLNP
Sbjct: 133 LLVQKQPMGDNYEIIAGERRWRAAKLAGLKEVPVIIREYTRQQTMEIALIENVQREDLNP 192
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EEA Y+ LI E+G Q D+ V K+R+ + N +R+LKL V+E++ + I+ GHAR
Sbjct: 193 IEEAKAYQMLIREFGLKQEDVAERVAKNRATITNSMRLLKLDERVQELLIQNRITGGHAR 252
Query: 198 TLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
L+ +A I++ K+SVR+ E LV + K K K++ ++ + DLE
Sbjct: 253 ALLVLEDGEQQYQIANKIINNKLSVREVERLV-KLLTKPAKIKEVKPEEKDFNIFYQDLE 311
Query: 255 KKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGE 295
K+ + +G + I + NKG+ I+Y ++ +L+ I LL
Sbjct: 312 DKLKAVMGTKVIINKKDKNKGRIEIEYYSSAELERIAELLQS 353
>gi|289706709|ref|ZP_06503057.1| ParB-like partition protein [Micrococcus luteus SK58]
gi|289556629|gb|EFD49972.1| ParB-like partition protein [Micrococcus luteus SK58]
Length = 457
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 90/280 (32%), Positives = 141/280 (50%), Gaps = 5/280 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + E I + I PNP PR F+ + + +L SI+ GI+QP
Sbjct: 165 ADSTADPVATEGTVSADIAVLREIPVGDIHPNPRQPREVFDEDHMAELVTSIREVGILQP 224
Query: 79 LIVRAIDNGLYKI-IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
++VR +D I GERR+RA + A L +P I+R ++ L A++EN+ R LNP
Sbjct: 225 IVVREVDGPTPYELIMGERRWRATQKAGLDTIPAIVRQTPDQDLLRDALLENLHRSQLNP 284
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA Y+QL+ ++ TQ ++ +G+SR ++N LR+LKLP V+ + +S GHAR
Sbjct: 285 LEEAAAYQQLMEDFACTQEELSQRIGRSRPQISNTLRLLKLPPLVQRRVAAGTLSAGHAR 344
Query: 198 T---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE-KEKYLTDL 253
L SD LAQ I S+ +SVR TEE V + + + + + + L
Sbjct: 345 ALLGLTDPSDMERLAQRIQSEGLSVRATEEAVAQLQGGLRPGRTPRRSTDDARHERLDHY 404
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++S++ + I KG+ I + T E L I L+
Sbjct: 405 ATALTSRLDTAVKITLGARKGRIAIDFTTVEDLNRIMDLI 444
>gi|146329286|ref|YP_001210033.1| ParB family partitioning protein [Dichelobacter nodosus VCS1703A]
gi|146232756|gb|ABQ13734.1| partioning protein, ParB/SpoJ family [Dichelobacter nodosus
VCS1703A]
Length = 289
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 99/282 (35%), Positives = 154/282 (54%), Gaps = 13/282 (4%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L L+G+ Q S + I + + PR +F ++ L+ L +SIK+
Sbjct: 10 LEHLLGDFAQLDCSHH--------RVEEIPLVQLQAGAFQPRKHFSAQSLQALIESIKNC 61
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
GI+ PLIVR Y++IAGERR RAAK +VP I+RN ++ L IA++ENVQR
Sbjct: 62 GILHPLIVRKTPAARYELIAGERRARAAKALGWEKVPCIVRNYSDREVLLIALIENVQRA 121
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
DLN LE A G ++L+ E T + +G RS V+N+LR+L ++V++ + EEI +
Sbjct: 122 DLNVLETAQGLQRLVEECQLTHEQVARSIGWQRSSVSNMLRLLDCCAAVKQALCAEEIEM 181
Query: 194 GHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
GHAR L +S + + I++ ++VR TE+LV+ K E SR+KE +
Sbjct: 182 GHARALLSLSEIEQRQALEKIITGALNVRQTEQLVRRMKAKNAAH--CVEKSRQKEVEIV 239
Query: 252 DLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
DLE+K+S +G +SI + KG + Y+ ++L+ I
Sbjct: 240 DLEEKLSQFMGYRVSINAQKGGKGSLVLHYQNLDELEGILDK 281
>gi|296125610|ref|YP_003632862.1| parB-like partition protein [Brachyspira murdochii DSM 12563]
gi|296017426|gb|ADG70663.1| parB-like partition protein [Brachyspira murdochii DSM 12563]
Length = 312
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 165/298 (55%), Gaps = 12/298 (4%)
Query: 7 KRRLG-RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LG +G+ ALI + I ++ E ++I I NP PR F E ++
Sbjct: 4 KGGLGGQGMNALIKSADSEIRKAAEEAEKR--GVLEVNISLIDVNPDQPRKIFNEEEIQG 61
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPV-IIRNVDNKSSLEI 124
L +SI+ +G+I I +G Y+II+GERRFRA K + +VP ++ N+D+ LE+
Sbjct: 62 LAESIRENGLI-NPITLREKDGQYQIISGERRFRAFKFLNRDKVPALVLENIDDSKMLEL 120
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+VEN+QR DLN +E A Y++LI + Q ++ + VGKSRS ++N +RIL L +++
Sbjct: 121 TLVENIQRADLNAIEIARSYKKLIYDLNIKQEELANRVGKSRSTISNSMRILDLSENIQN 180
Query: 185 MIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQD---NKKEKRKK 238
+I + +I+ GHAR + ++ + A+ IV SVR+ E++ +E+ N++E +K
Sbjct: 181 LILESKITEGHARAILSLTDENEREAFAKEIVENGYSVRECEKIAKERKNENNQQENNQK 240
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQLKIICSLLGE 295
+ +K+ + LE + +++ +N K G+ I+Y +++ L I +L +
Sbjct: 241 DTKKEIKKDPNIRQLENDLEKIFSTKVNVIDKNGKEGKIVIEYYSSDDLSRIMDMLDK 298
>gi|251811319|ref|ZP_04825792.1| stage 0 DNA-binding protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|251805186|gb|EES57843.1| stage 0 DNA-binding protein [Staphylococcus epidermidis
BCM-HMP0060]
Length = 280
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 96/270 (35%), Positives = 156/270 (57%), Gaps = 4/270 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+S I++ I PNP+ PR FE E L DL SI+ HGI+QP+++R G Y ++
Sbjct: 12 NNDDSVQFIALELIRPNPYQPRKTFEEERLNDLASSIQQHGILQPIVLRQTVQGYYIVV- 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRA+K+A L+EVP II+ + ++ +E+AI+EN+QR+DLN +EEA Y++++++
Sbjct: 71 GERRFRASKLAGLTEVPAIIKELSDEDMMELAIIENLQREDLNAIEEAESYKKMMTDLNI 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQ 210
TQ ++ +GKSR ++AN+LR+L+LP +V +M++ +S H RTL S A+
Sbjct: 131 TQQEVARRLGKSRPYIANMLRLLQLPKNVAQMVQHGALSSAHGRTLLTLKDASKIKKTAK 190
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+ SVR EE V +K RK E K K + E+ + + G + I
Sbjct: 191 QAAQESWSVRYLEEYVNGLVSKDISRKVDKETKESKPKMIQQQERFLKKQYGAKVDISTS 250
Query: 271 NNKGQFCIKYETNEQLKIICSLLGENDFEY 300
N G+ ++++ + K + L ++ EY
Sbjct: 251 KNVGKITFEFKSEAEFKRLIRQLNKDYKEY 280
>gi|313829169|gb|EFS66883.1| ParB-like partition protein [Propionibacterium acnes HL063PA2]
gi|315109703|gb|EFT81679.1| ParB-like partition protein [Propionibacterium acnes HL030PA2]
Length = 308
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 97/309 (31%), Positives = 165/309 (53%), Gaps = 15/309 (4%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M+ LGRG L + S D + IS+ I P
Sbjct: 1 MTVAAKHSGLGRGFGELFQRTDLDDDDEERVDDASTDGDAINERVGGSRLELISVDEISP 60
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N PR F E L +L +SI++ G++QP++V DNG Y+++ GERR+RAA+ A L+ V
Sbjct: 61 NARQPRKMFNEEELTELSESIRAVGVLQPVVVTPADNG-YELVMGERRWRAARKADLATV 119
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 120 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQI 179
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + EI+ GHAR L++ +P A +V + +SVR TEELV
Sbjct: 180 ANTIRLLKLSADVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELV 239
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
++ + + K ++ L +++S + + ++ RN +G + NE+L
Sbjct: 240 RQTLDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEEL 299
Query: 287 KIICSLLGE 295
+ + + +
Sbjct: 300 ERLIDIFSD 308
>gi|27469296|ref|NP_765933.1| transcription terminator [Staphylococcus epidermidis ATCC 12228]
gi|27316846|gb|AAO06021.1|AE016752_54 transcription terminator [Staphylococcus epidermidis ATCC 12228]
Length = 280
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 96/270 (35%), Positives = 157/270 (58%), Gaps = 4/270 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+S I++ I PNP+ PR FE E L DL SI+ HGI+QP+++R G Y ++
Sbjct: 12 NNDDSVQFIALELIRPNPYQPRKTFEEERLNDLASSIQQHGILQPIVLRQTVQGYYIVV- 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRA+K+A L+EVP II+ + ++ +E+AI+EN+QR+DLN +EEA Y++++++
Sbjct: 71 GERRFRASKLAGLTEVPAIIKELSDEDMMELAIIENLQREDLNAIEEAESYKKMMTDLNI 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQ 210
TQ ++ +GKSR ++AN+LR+L+LP +V +M+++ +S H RTL S A+
Sbjct: 131 TQQEVARRLGKSRPYIANMLRLLQLPKNVAQMVQQGALSSAHGRTLLTLKDASKIKKTAK 190
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+ SVR EE V +K RK E K K + E+ + + G + I
Sbjct: 191 QAAQESWSVRYLEEYVNGLVSKDMSRKVDKETKGSKPKMIQQQERFLKKQYGAKVDISTS 250
Query: 271 NNKGQFCIKYETNEQLKIICSLLGENDFEY 300
N G+ ++++ + K + L ++ EY
Sbjct: 251 KNVGKITFEFKSEAEFKRLIRQLNKDYKEY 280
>gi|298243814|ref|ZP_06967621.1| parB-like partition protein [Ktedonobacter racemifer DSM 44963]
gi|297556868|gb|EFH90732.1| parB-like partition protein [Ktedonobacter racemifer DSM 44963]
Length = 338
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 97/339 (28%), Positives = 163/339 (48%), Gaps = 44/339 (12%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKK--TETIPESQDCISIHSIVPNPHNPRNYF 58
M+ + LGRGL ALI + + ++ + +S+ SI+PNP PR F
Sbjct: 1 MAK--QRFGLGRGLDALISGASDVMGPQQQAPAANADVGALPQVSLESIIPNPRQPRKVF 58
Query: 59 --ESEGLEDLCQSIKSHGIIQPLIVRAIDN-----------------------------G 87
+ L +L SIK HG++QP+IV +D
Sbjct: 59 RDDDPKLLELSASIKEHGLLQPIIVARLDQVEKRADTGDSWFGEPGESTSVAALDDEAIV 118
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y+IIAGERR+RA+KMA L +VPV+++ V + LE+A++EN+QR DLNP+EEA+ Y++L
Sbjct: 119 RYQIIAGERRWRASKMAGLKQVPVVVKEVTPQQMLELALIENIQRADLNPIEEAMAYQEL 178
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART-----LVST 202
+ +G TQ + VGK RS + N LR+L+L +RE + + +
Sbjct: 179 VQTFGLTQEQVARQVGKDRSTITNSLRLLQLAPKLREALVNQPDIFTEGHARALAGITRE 238
Query: 203 SDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR--KKIFEGSREKEKYLTDLEKKISSK 260
D ++ +++ ++VR TEEL ++ K + + L LE +
Sbjct: 239 EDQVTAMNQVIALHLNVRQTEELASRIKASQDIEAAVKKITTTSGRTPELESLESQFRDS 298
Query: 261 VGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL-GEND 297
+ + + +K + KG + + ++L+ + S L + D
Sbjct: 299 LMVKVDLKCNAKGKGTLVLHFNDQDELEGLYSRLVKKED 337
>gi|295394854|ref|ZP_06805067.1| chromosome segregation DNA-binding protein [Brevibacterium
mcbrellneri ATCC 49030]
gi|294972187|gb|EFG48049.1| chromosome segregation DNA-binding protein [Brevibacterium
mcbrellneri ATCC 49030]
Length = 375
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 94/282 (33%), Positives = 157/282 (55%), Gaps = 7/282 (2%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
N + + + + + +I PNP PR F+ + L++L SI+ G++QP++
Sbjct: 96 SNDDVSRETELVAVPGTAFGMLRLDTISPNPRQPRTVFDEDDLDELVTSIQEVGVLQPVV 155
Query: 81 VRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
VR +D Y++I GERR RA+K+A L E+P I+R V + L A++EN+ R DLNPL
Sbjct: 156 VRVVDTKKPAYELIMGERRLRASKLAGLKEIPAIVREVSDDDLLRDALLENLHRSDLNPL 215
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ ++ TQ ++ +G+SR +AN LR+L+LP V+ + +S GHAR
Sbjct: 216 EEAAAYQQLLDDFKCTQEELSERIGRSRPQIANTLRLLRLPGLVQRRVAAGVLSQGHARA 275
Query: 199 LV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
L+ + LAQ IV++ +SVR TEE V + +K + +R+ + L L +
Sbjct: 276 LLGLNDPAQMEELAQRIVAEGLSVRATEEAVVLLNRGDQKN--VSRETRKADAELVSLAQ 333
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ K+ ++I KG+ + + + L+ I +LG N+
Sbjct: 334 SVGDKLDTKVNIVMGKRKGKMTVDFANQQDLERILKVLGLNE 375
>gi|261378151|ref|ZP_05982724.1| sulfite reductase flavoprotein, alpha component [Neisseria cinerea
ATCC 14685]
gi|269145614|gb|EEZ72032.1| sulfite reductase flavoprotein, alpha component [Neisseria cinerea
ATCC 14685]
Length = 286
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 98/297 (32%), Positives = 167/297 (56%), Gaps = 19/297 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LGRGL +L+ + + + +++ I P + R +
Sbjct: 1 MAKV--KGGLGRGLDSLLANGADN---------SSGDRLTTVAVKDIQPGRYQARVQIDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+ G+IQP+IVR Y++IAGERR+RA+++A L E+PV+I+ + +++
Sbjct: 50 EALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRASQLAGLIEIPVVIKTISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+G T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAKAVGKSRSAISNSLRLLSLPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+EM+ + + +GHAR L++ + L LAQ V SVR+ E ++ + K
Sbjct: 170 PVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERR-----SQIAHQNK 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
E + ++ L ++ ++G+N +K N KG+ + ++T E + LG
Sbjct: 225 QSEPKKNAASDISRLNDLLTERLGVNAEVKTVNHKKGRIVLYFDTPETFGHLLEQLG 281
>gi|282874672|ref|ZP_06283554.1| ParB-like protein [Staphylococcus epidermidis SK135]
gi|293367626|ref|ZP_06614278.1| chromosome partitioning protein SpoOJ [Staphylococcus epidermidis
M23864:W2(grey)]
gi|281296596|gb|EFA89108.1| ParB-like protein [Staphylococcus epidermidis SK135]
gi|291318196|gb|EFE58590.1| chromosome partitioning protein SpoOJ [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329736151|gb|EGG72424.1| stage 0 sporulation protein J [Staphylococcus epidermidis VCU045]
Length = 280
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 94/270 (34%), Positives = 156/270 (57%), Gaps = 4/270 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+S I++ I PNP+ PR FE E L DL SI+ HGI+QP+++R G Y ++
Sbjct: 12 NNDDSVQFIALELIRPNPYQPRKTFEEERLNDLASSIQQHGILQPIVLRQTVQGYYIVV- 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRA+++A L+EVP II+ + ++ +E+AI+EN+QR+DLN +EEA Y++++++
Sbjct: 71 GERRFRASQLAGLTEVPAIIKELSDEDMMELAIIENLQREDLNAIEEAESYKKMMTDLNI 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQ 210
TQ ++ +GKSR ++AN+LR+L+LP +V +M+++ +S H RTL S A+
Sbjct: 131 TQQEVARRLGKSRPYIANMLRLLQLPKNVAQMVQQGALSSAHGRTLLTLKDASKIKKTAK 190
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+ SVR EE V +K K E K K + E+ + + G + I
Sbjct: 191 QATQESWSVRYLEEYVNGLVSKDISMKLDRETKGSKPKMIQQQERFLKKQYGAKVDISTS 250
Query: 271 NNKGQFCIKYETNEQLKIICSLLGENDFEY 300
N G+ ++++ + K + L ++ EY
Sbjct: 251 KNVGKITFEFKSEAEFKRLIRQLNKDYKEY 280
>gi|313158048|gb|EFR57453.1| putative stage 0 sporulation protein J [Alistipes sp. HGB5]
Length = 291
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 101/288 (35%), Positives = 157/288 (54%), Gaps = 10/288 (3%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LGRGL A+ G I I I+PNP PR F+ E L++L
Sbjct: 5 KGLGRGLDAIFGTDAVDAK------LKPMSQMTEIDIAEIIPNPTQPRTQFDEEALDELA 58
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SI+ GIIQP+ V+ +G Y II+GERR+RAA+ A L +P +R VD+++ +A+V
Sbjct: 59 DSIRQLGIIQPITVKKSGDGKYIIISGERRWRAAQRADLKSLPAYVREVDDENLHAMALV 118
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLN +E ALG ++LI E TQ+ + VGK RS V+N +R+LKLP V+ ++
Sbjct: 119 ENIQRQDLNAIEIALGMQRLIEECNLTQDALSEKVGKKRSTVSNYMRLLKLPDEVQLALK 178
Query: 188 KEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ IS+GHA+ + L + I+ K +SVR EELV+ + + + E
Sbjct: 179 EGLISMGHAKAIAGAPQELQLRTLKKILKKSLSVRQAEELVRTLTEQPAEAAQNMEDEEY 238
Query: 246 KEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
E Y + L +++ ISIK +N G+ I ++ ++ ++
Sbjct: 239 PESY-SRLVEQLEKFFSQEISIKRSKNGGGRIVIGFDDDKDIEQFIER 285
>gi|329734354|gb|EGG70668.1| stage 0 sporulation protein J [Staphylococcus epidermidis VCU028]
Length = 280
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 94/270 (34%), Positives = 156/270 (57%), Gaps = 4/270 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+S I++ I PNP+ PR FE E L DL SI+ HGI+QP+++R G Y ++
Sbjct: 12 NNDDSVQFIALELIRPNPYQPRKTFEEERLNDLASSIQQHGILQPIVLRQTVQGYYIVV- 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRA+++A L+EVP II+ + ++ +E+AI+EN+QR+DLN +EEA Y++++++
Sbjct: 71 GERRFRASQLAGLTEVPAIIKELSDEDMMELAIIENLQREDLNAIEEAESYKKMMTDLNI 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQ 210
TQ ++ +GKSR ++AN+LR+L+LP +V +M+++ +S H RTL S A+
Sbjct: 131 TQQEVARRLGKSRPYIANMLRLLQLPKNVAQMVQQGALSSAHGRTLLTLKDASKIKKTAK 190
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+ SVR EE V +K K E K K + E+ + + G + I
Sbjct: 191 QAAQESWSVRYLEEYVNGLVSKDISMKLDRETKGSKPKMIQQQERFLKKQYGAKVDISTS 250
Query: 271 NNKGQFCIKYETNEQLKIICSLLGENDFEY 300
N G+ ++++ + K + L ++ EY
Sbjct: 251 KNVGKITFEFKSEAEFKRLIRQLNKDYKEY 280
>gi|313765045|gb|EFS36409.1| ParB-like partition protein [Propionibacterium acnes HL013PA1]
gi|313771086|gb|EFS37052.1| ParB-like partition protein [Propionibacterium acnes HL074PA1]
gi|313792587|gb|EFS40673.1| ParB-like partition protein [Propionibacterium acnes HL110PA1]
gi|313803588|gb|EFS44770.1| ParB-like partition protein [Propionibacterium acnes HL110PA2]
gi|313806836|gb|EFS45334.1| ParB-like partition protein [Propionibacterium acnes HL087PA2]
gi|313811749|gb|EFS49463.1| ParB-like partition protein [Propionibacterium acnes HL083PA1]
gi|313814238|gb|EFS51952.1| ParB-like partition protein [Propionibacterium acnes HL025PA1]
gi|313815706|gb|EFS53420.1| ParB-like partition protein [Propionibacterium acnes HL059PA1]
gi|313817624|gb|EFS55338.1| ParB-like partition protein [Propionibacterium acnes HL046PA2]
gi|313821549|gb|EFS59263.1| ParB-like partition protein [Propionibacterium acnes HL036PA1]
gi|313824507|gb|EFS62221.1| ParB-like partition protein [Propionibacterium acnes HL036PA2]
gi|313826851|gb|EFS64565.1| ParB-like partition protein [Propionibacterium acnes HL063PA1]
gi|313832283|gb|EFS69997.1| ParB-like partition protein [Propionibacterium acnes HL007PA1]
gi|313832743|gb|EFS70457.1| ParB-like partition protein [Propionibacterium acnes HL056PA1]
gi|313839603|gb|EFS77317.1| ParB-like partition protein [Propionibacterium acnes HL086PA1]
gi|314916195|gb|EFS80026.1| ParB-like partition protein [Propionibacterium acnes HL005PA4]
gi|314917461|gb|EFS81292.1| ParB-like partition protein [Propionibacterium acnes HL050PA1]
gi|314921798|gb|EFS85629.1| ParB-like partition protein [Propionibacterium acnes HL050PA3]
gi|314926255|gb|EFS90086.1| ParB-like partition protein [Propionibacterium acnes HL036PA3]
gi|314955395|gb|EFS99800.1| ParB-like partition protein [Propionibacterium acnes HL027PA1]
gi|314959140|gb|EFT03242.1| ParB-like partition protein [Propionibacterium acnes HL002PA1]
gi|314961644|gb|EFT05745.1| ParB-like partition protein [Propionibacterium acnes HL002PA2]
gi|314963894|gb|EFT07994.1| ParB-like partition protein [Propionibacterium acnes HL082PA1]
gi|314969102|gb|EFT13200.1| ParB-like partition protein [Propionibacterium acnes HL037PA1]
gi|314975181|gb|EFT19276.1| ParB-like partition protein [Propionibacterium acnes HL053PA1]
gi|314977590|gb|EFT21685.1| ParB-like partition protein [Propionibacterium acnes HL045PA1]
gi|314979940|gb|EFT24034.1| ParB-like partition protein [Propionibacterium acnes HL072PA2]
gi|314985062|gb|EFT29154.1| ParB-like partition protein [Propionibacterium acnes HL005PA1]
gi|314987131|gb|EFT31223.1| ParB-like partition protein [Propionibacterium acnes HL005PA2]
gi|314990669|gb|EFT34760.1| ParB-like partition protein [Propionibacterium acnes HL005PA3]
gi|315078973|gb|EFT50985.1| ParB-like partition protein [Propionibacterium acnes HL053PA2]
gi|315081516|gb|EFT53492.1| ParB-like partition protein [Propionibacterium acnes HL078PA1]
gi|315083060|gb|EFT55036.1| ParB-like partition protein [Propionibacterium acnes HL027PA2]
gi|315086594|gb|EFT58570.1| ParB-like partition protein [Propionibacterium acnes HL002PA3]
gi|315087997|gb|EFT59973.1| ParB-like partition protein [Propionibacterium acnes HL072PA1]
gi|315096924|gb|EFT68900.1| ParB-like partition protein [Propionibacterium acnes HL038PA1]
gi|315099361|gb|EFT71337.1| ParB-like partition protein [Propionibacterium acnes HL059PA2]
gi|315102297|gb|EFT74273.1| ParB-like partition protein [Propionibacterium acnes HL046PA1]
gi|315107408|gb|EFT79384.1| ParB-like partition protein [Propionibacterium acnes HL030PA1]
gi|327332482|gb|EGE74217.1| ParA [Propionibacterium acnes HL096PA2]
gi|327334106|gb|EGE75821.1| ParA [Propionibacterium acnes HL096PA3]
gi|327444489|gb|EGE91143.1| ParB-like partition protein [Propionibacterium acnes HL013PA2]
gi|327446742|gb|EGE93396.1| ParB-like partition protein [Propionibacterium acnes HL043PA2]
gi|327448817|gb|EGE95471.1| ParB-like partition protein [Propionibacterium acnes HL043PA1]
gi|327454236|gb|EGF00891.1| ParB-like partition protein [Propionibacterium acnes HL087PA3]
gi|327457432|gb|EGF04087.1| ParB-like partition protein [Propionibacterium acnes HL092PA1]
gi|328755992|gb|EGF69608.1| ParB-like partition protein [Propionibacterium acnes HL087PA1]
gi|328757994|gb|EGF71610.1| ParB-like partition protein [Propionibacterium acnes HL020PA1]
gi|328758956|gb|EGF72572.1| ParB-like partition protein [Propionibacterium acnes HL025PA2]
gi|328759879|gb|EGF73469.1| ParA [Propionibacterium acnes HL099PA1]
Length = 308
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 97/309 (31%), Positives = 165/309 (53%), Gaps = 15/309 (4%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M+ LGRG L + S D + IS+ I P
Sbjct: 1 MTVAAKHSGLGRGFGELFQRTDLDDDDEERVDDASTDGDAINERVGGSRLELISVDEISP 60
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N PR F E L +L +SI++ G++QP++V DNG Y+++ GERR+RAA+ A L+ V
Sbjct: 61 NARQPRKMFNEEELTELSESIRAVGVLQPVVVTPADNG-YELVMGERRWRAARKAGLATV 119
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 120 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQI 179
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + EI+ GHAR L++ +P A +V + +SVR TEELV
Sbjct: 180 ANTIRLLKLSADVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELV 239
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
++ + + K ++ L +++S + + ++ RN +G + NE+L
Sbjct: 240 RQTLDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEEL 299
Query: 287 KIICSLLGE 295
+ + + +
Sbjct: 300 ERLIDIFSD 308
>gi|300215177|gb|ADJ79593.1| Chromosome partitioning protein, DNA-binding protein [Lactobacillus
salivarius CECT 5713]
Length = 262
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 100/274 (36%), Positives = 153/274 (55%), Gaps = 15/274 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + LGRG+ AL K+ + E + I I PNP+ PR F
Sbjct: 1 MASRS--KGLGRGIDALF--------QESKEEQQPDEQVVELEISEIRPNPYQPRKTFNE 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L +SIK G+ QP+IVR Y+IIAGERR+RA+K+A +E+P IIR + +
Sbjct: 51 EALEELAKSIKKSGVFQPIIVRKSSVKGYEIIAGERRYRASKLAKKTEIPAIIREFNEEQ 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DL PLEEA Y L+ + TQ + +GKSR ++AN LR+L LP
Sbjct: 111 MMEVAVLENLQREDLTPLEEAEAYNTLMEKLNLTQTQVSERLGKSRPYIANYLRLLGLPG 170
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M++ +S+G ART + + LA+ V + ++VR E+LV + + KK K+
Sbjct: 171 KVKLMLQDGSLSMGQARTLLAVKDEEKLMELAEKTVKEGLTVRQLEQLVAQINGKKPKKA 230
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN 271
K E Y+ E + K G +++K
Sbjct: 231 KKQTNP--YEPYIKQTENLLQEKFGTKVAVKANG 262
>gi|172041698|ref|YP_001801412.1| chromosome partitioning protein ParB [Corynebacterium urealyticum
DSM 7109]
gi|171853002|emb|CAQ05978.1| chromosome partitioning protein ParB [Corynebacterium urealyticum
DSM 7109]
Length = 478
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 83/285 (29%), Positives = 151/285 (52%), Gaps = 7/285 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
++ ++ + + + +I NP PR+ F+ E L +L SI+ G++QP+
Sbjct: 193 SQGEAGGPELSNADSFGATYQELPLDAITTNPKQPRSVFDEEQLNELVHSIREFGLMQPI 252
Query: 80 IVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
+VR + Y++I GERR RA+K A L +P I+R + + L A++EN+ R LNP
Sbjct: 253 VVRPVSGAPAPYELIMGERRLRASKKAGLETIPAIVRETQDDAMLRDALLENIHRVQLNP 312
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA Y+QL+ E+G TQ + +G+SRS +AN++R+L+LP +V+ + +S GHAR
Sbjct: 313 LEEAAAYQQLLEEFGVTQEQLAKRIGRSRSLIANMIRLLQLPVAVQRRVSAGVLSAGHAR 372
Query: 198 TLVS----TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD- 252
L++ LA IV++ +SVR TEE V + + ++++ + + +
Sbjct: 373 ALLALKGGEEAQAQLADRIVAEGLSVRATEEAVTLMNRGESQKQERKQRTPAPLPDYVNS 432
Query: 253 LEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ + +S++ +G+ +++ E I +LG +
Sbjct: 433 WVDDFADTLETKVSVQMGKKRGRIVVEFGGQEDFDRIIEILGGGE 477
>gi|70727633|ref|YP_254549.1| hypothetical protein SH2634 [Staphylococcus haemolyticus JCSC1435]
gi|68448359|dbj|BAE05943.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 276
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 87/273 (31%), Positives = 158/273 (57%), Gaps = 5/273 (1%)
Query: 26 DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID 85
+ E+ + E I + I NP+ PR F+ + L DL SI++HG++QP+++R
Sbjct: 4 NQDERLAISQNEQIQKIDLSKIKANPYQPRKTFDDDRLSDLAMSIQTHGVLQPIVLRQTV 63
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
G Y ++ GERRFRA+++A L+E+P II+ + + +E+AI+EN+QR+DLN +EEA Y+
Sbjct: 64 QGYYIVV-GERRFRASQLAGLTEIPAIIKELSDSDMMELAIIENLQREDLNAIEEAESYQ 122
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVST 202
+L+++ G TQ + +GKSR ++AN+LR+L LP + +++ +S H RT +
Sbjct: 123 RLMNDLGLTQQKVAERLGKSRPYIANMLRLLNLPKDISNQVKEGALSSAHGRTLLGIKDV 182
Query: 203 SDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVG 262
+ ++Q + + SVR E++V E + + KK ++ K ++ E+++ K G
Sbjct: 183 TMMKKISQQAIRENWSVRYLEQVVNELQDG-GQSKKSKATTQIKPIFIQKQERRLKEKFG 241
Query: 263 LNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ I N G+ +++T E+ K + L +
Sbjct: 242 SKVDISTSKNIGKITFEFKTEEEFKRLIQKLND 274
>gi|331002970|ref|ZP_08326482.1| hypothetical protein HMPREF0491_01344 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413014|gb|EGG92389.1| hypothetical protein HMPREF0491_01344 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 309
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 106/308 (34%), Positives = 175/308 (56%), Gaps = 20/308 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETI-------PESQDCISIHSIVPNPHN 53
M+ + LG+G AL+ +N + + ++ + + + I + PN +
Sbjct: 1 MAKRMA---LGKGADALLRNINGTKSAIDETVDKSIDNNISDKTGELMVKISLVEPNRNQ 57
Query: 54 PRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVII 113
PR F+ + LE+L S+K +G++QP++V+ I + Y+I+AGERR+RAA+ A LSEVP+++
Sbjct: 58 PRKMFDKDSLEELTNSVKQYGVLQPILVKKIGDR-YEIVAGERRWRAAQAAGLSEVPIVV 116
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
R+ D + + EIAI+EN+QR DLNP+EEAL Y+ LI EY TQ ++ V K+RS + N L
Sbjct: 117 RDYDEQKAKEIAIIENIQRTDLNPIEEALAYKSLIEEYSLTQEELSDKVSKNRSTITNSL 176
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQD 230
R+LKL ++++ + +IS GHAR L+S D A I+ + +SVRDTE+ +E
Sbjct: 177 RLLKLSKNIQQYMIDGQISSGHARALLSLEDEGKRELLALDIMKRNLSVRDTEKAAKELS 236
Query: 231 NKKEKRKKIFEGS-----REKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNE 284
KK+ + R+ + + E I +G + I + NKG+ I+Y +
Sbjct: 237 KKKKIDISDINKTDNDTARDLSLFYKEYEDSIQGVLGTKVHINQKDKNKGRIEIEYYSQV 296
Query: 285 QLKIICSL 292
+L I +
Sbjct: 297 ELDRIMDI 304
>gi|257794195|ref|ZP_05643174.1| ParB family partitioning protein [Staphylococcus aureus A9781]
gi|258413520|ref|ZP_05681795.1| ParB family partitioning protein [Staphylococcus aureus A9763]
gi|258421356|ref|ZP_05684283.1| ParB family partitioning protein [Staphylococcus aureus A9719]
gi|258436943|ref|ZP_05689283.1| chromosome partioning ParB family protein [Staphylococcus aureus
A9299]
gi|258444340|ref|ZP_05692674.1| ParB family partitioning protein [Staphylococcus aureus A8115]
gi|258444877|ref|ZP_05693198.1| chromosome partioning ParB family protein [Staphylococcus aureus
A6300]
gi|258448082|ref|ZP_05696211.1| chromosome partioning ParB family protein [Staphylococcus aureus
A6224]
gi|258455915|ref|ZP_05703870.1| spoOJ protein [Staphylococcus aureus A5937]
gi|269202008|ref|YP_003281277.1| spoOJ protein [Staphylococcus aureus subsp. aureus ED98]
gi|282893520|ref|ZP_06301753.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8117]
gi|282927414|ref|ZP_06335032.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A10102]
gi|295405632|ref|ZP_06815442.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8819]
gi|297245539|ref|ZP_06929407.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8796]
gi|257788167|gb|EEV26507.1| ParB family partitioning protein [Staphylococcus aureus A9781]
gi|257839767|gb|EEV64236.1| ParB family partitioning protein [Staphylococcus aureus A9763]
gi|257842780|gb|EEV67202.1| ParB family partitioning protein [Staphylococcus aureus A9719]
gi|257848734|gb|EEV72721.1| chromosome partioning ParB family protein [Staphylococcus aureus
A9299]
gi|257850599|gb|EEV74547.1| ParB family partitioning protein [Staphylococcus aureus A8115]
gi|257856195|gb|EEV79109.1| chromosome partioning ParB family protein [Staphylococcus aureus
A6300]
gi|257858597|gb|EEV81471.1| chromosome partioning ParB family protein [Staphylococcus aureus
A6224]
gi|257862127|gb|EEV84900.1| spoOJ protein [Staphylococcus aureus A5937]
gi|262074298|gb|ACY10271.1| spoOJ protein [Staphylococcus aureus subsp. aureus ED98]
gi|282590738|gb|EFB95814.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A10102]
gi|282764206|gb|EFC04333.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8117]
gi|294969707|gb|EFG45726.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8819]
gi|297177525|gb|EFH36776.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8796]
gi|329725573|gb|EGG62052.1| stage 0 sporulation protein J [Staphylococcus aureus subsp. aureus
21172]
Length = 281
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 89/277 (32%), Positives = 155/277 (55%), Gaps = 5/277 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
S ++ T+T E I I I PNP+ PR F+ L DL SIK +GI+QP++
Sbjct: 2 SELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIV 61
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
+R G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EE
Sbjct: 62 LRKTVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEE 120
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART-- 198
A Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT
Sbjct: 121 AESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLL 180
Query: 199 -LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ L LA+ +V +K SVR E V E N + + + K K++ E+++
Sbjct: 181 AIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKN-VSSKSETDKVDITKPKFIKQQERQL 239
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ G + I + + G+ ++++ + I L
Sbjct: 240 REQYGTKVDISIKKSVGKISFEFDSQDDFVRIIEQLN 276
>gi|329723886|gb|EGG60413.1| stage 0 sporulation protein J [Staphylococcus epidermidis VCU144]
Length = 280
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 96/270 (35%), Positives = 156/270 (57%), Gaps = 4/270 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+S I + I PNP+ PR FE E L DL SI+ HGI+QP+++R G Y ++
Sbjct: 12 NNDDSVQFIELELIRPNPYQPRKTFEEERLNDLASSIQQHGILQPIVLRQTVQGYYIVV- 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRA+K+A L+EVP II+ + ++ +E+AI+EN+QR+DLN +EEA Y++++++
Sbjct: 71 GERRFRASKLAGLTEVPAIIKELSDEDMMELAIIENLQREDLNAIEEAESYKKMMTDLNI 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQ 210
TQ ++ +GKSR ++AN+LR+L+LP +V +M+++ +S H RTL S A+
Sbjct: 131 TQQEVARRLGKSRPYIANMLRLLQLPKNVAQMVQQGALSSAHGRTLLTLKDASKIKKTAK 190
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+ SVR EE V +K RK E K K + E+ + + G + I
Sbjct: 191 QAAQESWSVRYLEEYVNGLVSKDISRKVDKETKGSKPKMIQQQERFLKKQYGAKVDISTS 250
Query: 271 NNKGQFCIKYETNEQLKIICSLLGENDFEY 300
N G+ ++++ + K + L ++ EY
Sbjct: 251 KNVGKITFEFKSEAEFKRLIRQLNKDYKEY 280
>gi|291521115|emb|CBK79408.1| ParB-like partition proteins [Coprococcus catus GD/7]
Length = 363
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 112/262 (42%), Positives = 158/262 (60%), Gaps = 6/262 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
++ + I I PN PR F+ + L++L SIK HGIIQPLIV+ D Y IIAGE
Sbjct: 100 KNAETLVKIDEIEPNRSQPRQNFDEDALQELADSIKLHGIIQPLIVQKKD-DFYTIIAGE 158
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAA++A L+E+PVII++ S+EIA++EN+QR+DLNP+EEA+ +++LI EYG Q
Sbjct: 159 RRWRAARLAGLTEIPVIIKDYTPMESMEIALIENLQREDLNPIEEAIAFQKLIDEYGLKQ 218
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVI 212
+ V KSR+ V N LR+LKL + V++MI E IS GH R + +LA I
Sbjct: 219 EEAAEKVSKSRTAVTNSLRLLKLDNRVKQMIVDEMISSGHGRALLAITDPELQYTLAMKI 278
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-N 271
K+SVR+TE L++ +K KK + LE KI S +G + I + N
Sbjct: 279 FDNKLSVRETERLIKNMLA-DKKNKKATGIDPQTAIIYHQLEDKIKSIIGTKVQINAKSN 337
Query: 272 NKGQFCIKYETNEQLKIICSLL 293
KG+ I+Y + E L+ I SLL
Sbjct: 338 KKGRIEIEYYSEEDLERIVSLL 359
Score = 39.7 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPE 37
M+ K+ LGRGL ALI E E
Sbjct: 1 MAV-KKKKGLGRGLDALISPTTSLTTHSETTAPKKSE 36
>gi|84497202|ref|ZP_00996024.1| putative ParB-like protein [Janibacter sp. HTCC2649]
gi|84382090|gb|EAP97972.1| putative ParB-like protein [Janibacter sp. HTCC2649]
Length = 376
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 12/285 (4%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
S + + + SI PNP PR F+ + L +L SI+ G++QP+
Sbjct: 89 TSADSPSDGPELIAVPGAQFAELPLDSIRPNPRQPRTVFDEDDLAELVHSIREIGVLQPI 148
Query: 80 IVRAIDNG--------LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
+VR + Y++I GERR+RA++ A VP II+ ++ L A++EN+
Sbjct: 149 VVRPVPADATDVPEGVQYELIMGERRWRASREAGNDSVPAIIKATEDDDLLRDALLENLH 208
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R +LN LEEA Y+QL+ ++ TQ ++ + +G+SR ++N LR+LKLP V + +
Sbjct: 209 RSNLNALEEAAAYQQLLDDFACTQEELATRIGRSRPQISNTLRLLKLPPIVARRVAAGVL 268
Query: 192 SLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
S GHAR + + LAQ IV++ +SVR EE+V + EK K + +
Sbjct: 269 SAGHARALLGVSDNAAMERLAQRIVAEGLSVRSVEEIVS-MGVEDEKPPKRRPRAGGRHP 327
Query: 249 YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
L DL +S ++ + I +KG+ I + + E L I +
Sbjct: 328 QLDDLAASLSDRLETRVGIALGKSKGKVTIDFASVEDLNRILDAM 372
>gi|57652620|ref|YP_185323.1| spoOJ protein [Staphylococcus aureus subsp. aureus COL]
gi|87161316|ref|YP_493075.1| ParB-like partition protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194142|ref|YP_498932.1| ParB family chromosome partioning protein [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|151220565|ref|YP_001331387.1| chromosome partioning ParB family protein [Staphylococcus aureus
subsp. aureus str. Newman]
gi|161508631|ref|YP_001574290.1| ParB family partitioning protein [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|258453047|ref|ZP_05701040.1| spoOJ protein [Staphylococcus aureus A5948]
gi|282922333|ref|ZP_06330024.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A9765]
gi|294850008|ref|ZP_06790746.1| ParB family partitioning protein [Staphylococcus aureus A9754]
gi|304380325|ref|ZP_07363045.1| chromosome partitioning protein SpoOJ [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|57286806|gb|AAW38900.1| spoOJ protein [Staphylococcus aureus subsp. aureus COL]
gi|87127290|gb|ABD21804.1| ParB-like partition protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201700|gb|ABD29510.1| chromosome partioning protein, ParB family, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|150373365|dbj|BAF66625.1| chromosome partioning ParB family protein [Staphylococcus aureus
subsp. aureus str. Newman]
gi|160367440|gb|ABX28411.1| possible ParB family partitioning protein [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257859257|gb|EEV82112.1| spoOJ protein [Staphylococcus aureus A5948]
gi|269939940|emb|CBI48312.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282593459|gb|EFB98454.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A9765]
gi|294823142|gb|EFG39573.1| ParB family partitioning protein [Staphylococcus aureus A9754]
gi|304341306|gb|EFM07225.1| chromosome partitioning protein SpoOJ [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|320139332|gb|EFW31211.1| ParB-like partition protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320142882|gb|EFW34678.1| ParB-like partition protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329724298|gb|EGG60811.1| stage 0 sporulation protein J [Staphylococcus aureus subsp. aureus
21189]
gi|329732553|gb|EGG68903.1| stage 0 sporulation protein J [Staphylococcus aureus subsp. aureus
21193]
Length = 281
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 155/277 (55%), Gaps = 5/277 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
S ++ T+T E I I I PNP+ PR F+ L DL SIK +GI+QP++
Sbjct: 2 SELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIV 61
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
+R G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EE
Sbjct: 62 LRKTVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEE 120
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART-- 198
A Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT
Sbjct: 121 AESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLL 180
Query: 199 -LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ L LA+ +V +K SVR E V E N + + + K K++ E+++
Sbjct: 181 AIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKN-VSSKSETDKVDITKPKFIKQQERQL 239
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ G + I + + G+ ++++ E I L
Sbjct: 240 REQYGTKVDISIKKSVGKISFEFDSQEDFVRIIEQLN 276
>gi|15923350|ref|NP_370884.1| transcription terminator [Staphylococcus aureus subsp. aureus Mu50]
gi|15926061|ref|NP_373594.1| hypothetical protein SA0348 [Staphylococcus aureus subsp. aureus
N315]
gi|148266847|ref|YP_001245790.1| parB-like partition protein [Staphylococcus aureus subsp. aureus
JH9]
gi|150392893|ref|YP_001315568.1| parB-like partition protein [Staphylococcus aureus subsp. aureus
JH1]
gi|156978688|ref|YP_001440947.1| hypothetical protein SAHV_0357 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253316539|ref|ZP_04839752.1| ParB-like partition protein [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|255005155|ref|ZP_05143756.2| ParB-like partition protein [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|296275187|ref|ZP_06857694.1| spoOJ protein [Staphylococcus aureus subsp. aureus MR1]
gi|13700274|dbj|BAB41572.1| SA0348 [Staphylococcus aureus subsp. aureus N315]
gi|14246128|dbj|BAB56522.1| similar to transcription terminator [Staphylococcus aureus subsp.
aureus Mu50]
gi|147739916|gb|ABQ48214.1| chromosome segregation DNA-binding protein [Staphylococcus aureus
subsp. aureus JH9]
gi|149945345|gb|ABR51281.1| parB-like partition protein [Staphylococcus aureus subsp. aureus
JH1]
gi|156720823|dbj|BAF77240.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|285816082|gb|ADC36569.1| Chromosome (plasmid) partitioning protein ParB [Staphylococcus
aureus 04-02981]
gi|312828882|emb|CBX33724.1| stage 0 sporulation protein J [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315130007|gb|EFT85996.1| possible ParB family partitioning protein [Staphylococcus aureus
subsp. aureus CGS03]
Length = 278
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 89/274 (32%), Positives = 155/274 (56%), Gaps = 5/274 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
S ++ T+T E I I I PNP+ PR F+ L DL SIK +GI+QP+++R
Sbjct: 2 SKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRK 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EEA
Sbjct: 62 TVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAES 120
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LV 200
Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT +
Sbjct: 121 YQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLLAIK 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
L LA+ +V +K SVR E V E N + + + K K++ E+++ +
Sbjct: 181 DEQQMLRLAKRVVKEKWSVRYLENHVNELKN-VSSKSETDKVDITKPKFIKQQERQLREQ 239
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
G + I + + G+ ++++ + I L
Sbjct: 240 YGTKVDISIKKSVGKISFEFDSQDDFVRIIEQLN 273
>gi|303246823|ref|ZP_07333100.1| parB-like partition protein [Desulfovibrio fructosovorans JJ]
gi|302491840|gb|EFL51720.1| parB-like partition protein [Desulfovibrio fructosovorans JJ]
Length = 333
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 101/310 (32%), Positives = 172/310 (55%), Gaps = 27/310 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +++ LGRGL AL+G + E +++ +I PNP PR F+
Sbjct: 23 MA--QAQKGLGRGLEALLGGYRD---------DKSGEDVQTLALDAIRPNPEQPRRAFDQ 71
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN---GLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ L DL SI+ G++QP++VR + + ++I+AGERR+RAA++A L+E+PV++R VD
Sbjct: 72 DALADLAASIREQGLLQPVLVRPVADVSGASHEIVAGERRWRAARLAGLTEIPVLVREVD 131
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ SL +A+VEN+QR+DLNP+EEA G L++ + +Q+ + VGKSR VAN LR+L+
Sbjct: 132 DEQSLALAMVENLQREDLNPMEEANGLHLLLTRFSMSQDALAKKVGKSRPAVANALRLLQ 191
Query: 178 LPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
LP+ ++E + K +S GHAR ++ + +L + IV SVR+ E+ +
Sbjct: 192 LPAPMQEDLAKGALSAGHARALLSVADPALCEALWRRIVETGCSVREAEDAAAYAKMHGK 251
Query: 235 KRKKIFEGSREK----------EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNE 284
+ + +REK E+ L D+E ++ + G+ + G+ Y +
Sbjct: 252 LPEGGVKPAREKTARPARKSVLEQVLRDIEGPLTERAGVMAKAAGSVDHGKITFHYSSRR 311
Query: 285 QLKIICSLLG 294
+L + G
Sbjct: 312 ELAGLLEHFG 321
>gi|323342288|ref|ZP_08082520.1| ParB family protein [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463400|gb|EFY08594.1| ParB family protein [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 289
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 98/295 (33%), Positives = 163/295 (55%), Gaps = 12/295 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGE--VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ S R LGRGL A+ G+ + D + + + + + I NP+ PR +F
Sbjct: 1 MAEKDSNR-LGRGLGAIFGDDVSSVLEDIQQGNNDEFTGVKTSLKVKDIRTNPYQPRRHF 59
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ + LE+L QSI +HG+ P++VR + G Y+++AGERR RA K A++ E+ I+ + D+
Sbjct: 60 DEDKLEELSQSISTHGLFTPILVRETNKG-YELVAGERRLRATKRANIEEIAAIVVDFDD 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+EIAI+ENVQR+DLN +EEA+GY LI G TQ ++ V KSRSH+ N+LR+L+L
Sbjct: 119 SQMMEIAIIENVQREDLNVIEEAMGYSSLIDRLGLTQEEVAKRVSKSRSHITNLLRLLRL 178
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P SV+EM+ ++++GH R LV+ DP + ++ + + V+E + K
Sbjct: 179 PKSVQEMVSDNKLTMGHVRPLVTIEDPKEIERIAEE----ILSKKLSVREAERLINKEDV 234
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + K + ++ ++I + + I ++ +E L I LL
Sbjct: 235 KPVEPKLRNKDYDYAQSLFERRLQTRVNIANN----KVMISFDDDEDLNRILELL 285
>gi|120601086|ref|YP_965486.1| parB-like partition proteins [Desulfovibrio vulgaris DP4]
gi|120561315|gb|ABM27059.1| chromosome segregation DNA-binding protein [Desulfovibrio vulgaris
DP4]
Length = 304
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 93/302 (30%), Positives = 160/302 (52%), Gaps = 28/302 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N R LGRGL AL + + + + + S+ PNP PR +F+
Sbjct: 1 MAGNQ--RGLGRGLDALFKNTVEPSAASD---------ITTLPVRSLAPNPAQPRKHFDE 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRA---IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
L++L SI++ G++QPL+VR + Y+IIAGERR+RA+++A L EVPV++R++
Sbjct: 50 SALQELADSIRAKGVLQPLLVRPVRGTEPQQYEIIAGERRWRASRVAGLREVPVLVRDLS 109
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ +L +A++EN+QR+DLNP+EEAL L ++ +Q ++ +GKSR VAN LR+L+
Sbjct: 110 DQETLAVALIENLQREDLNPVEEALAMHDLREQFSLSQEELARQLGKSRPAVANTLRLLQ 169
Query: 178 LPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK-- 232
LP + +R ++ GHAR + + +L I+ + ++VRD E
Sbjct: 170 LPQESLDDVRSGRLTPGHARALLGVTDHTAQETLRSAIIEQSLTVRDAEAASTYWKEHGT 229
Query: 233 ---------KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETN 283
+ + R K + L+K+I+ + L S+ KG+ I +++
Sbjct: 230 LPDTLAHVPHRTQTPRNKAMRTKTPEVKLLQKRIADTLSLKASVSGTEQKGRVTIAFDSP 289
Query: 284 EQ 285
+
Sbjct: 290 DD 291
>gi|49485240|ref|YP_042461.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253730723|ref|ZP_04864888.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735102|ref|ZP_04869267.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|297209127|ref|ZP_06925526.1| chromosome partitioning protein SpoOJ [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911128|ref|ZP_07128577.1| chromosome partitioning protein SpoOJ [Staphylococcus aureus subsp.
aureus TCH70]
gi|49243683|emb|CAG42107.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253725567|gb|EES94296.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726902|gb|EES95631.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|296886060|gb|EFH24994.1| chromosome partitioning protein SpoOJ [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300887307|gb|EFK82503.1| chromosome partitioning protein SpoOJ [Staphylococcus aureus subsp.
aureus TCH70]
Length = 281
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 155/277 (55%), Gaps = 5/277 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
S ++ T+T E I I I PNP+ PR F+ L DL SIK +GI+QP++
Sbjct: 2 SELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIV 61
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
+R G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EE
Sbjct: 62 LRKTVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEE 120
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART-- 198
A Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT
Sbjct: 121 AESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLL 180
Query: 199 -LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ L LA+ +V +K SVR E V E N + + + K K++ E+++
Sbjct: 181 AIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKN-VSSKSETDKVDITKPKFIKQQERQL 239
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ G + I + + G+ ++++ E I L
Sbjct: 240 REQYGTKVDISIKKSVGKISFEFDSQEDFLRIIEQLN 276
>gi|210624048|ref|ZP_03294165.1| hypothetical protein CLOHIR_02117 [Clostridium hiranonis DSM 13275]
gi|210153255|gb|EEA84261.1| hypothetical protein CLOHIR_02117 [Clostridium hiranonis DSM 13275]
Length = 262
Score = 125 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 87/257 (33%), Positives = 145/257 (56%), Gaps = 1/257 (0%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ I I+ I PN + PR F+ E +++L SI +G++QP+I++ NG Y IIAGERR
Sbjct: 3 NMKEIEIYKIYPNKNQPRKNFDEEKIQELADSINKYGLLQPIILKEDSNGEYMIIAGERR 62
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
F A K + ++P II++V + ++AI+EN+QR+DL+P+EEA Y++LI +Y TQ
Sbjct: 63 FTACKKLGMKKIPAIIKDVSYEEIDKLAIIENLQREDLSPVEEAKAYKRLIEKYNLTQTQ 122
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKM 217
+ VGKSR ++ N +R+L L V +M+ K EIS GH + L+ D ++
Sbjct: 123 LSESVGKSRPYITNSMRLLNLCDKVLDMLDKNEISSGHGKVLLRIDDIEEQERLAKKIVR 182
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEGSR-EKEKYLTDLEKKISSKVGLNISIKHRNNKGQF 276
+L +N + K KK EK+ ++ E + + +G ++I G+
Sbjct: 183 DKLSVRQLESIVNNMQNKEKKEKNKPVYEKDLFVLQAEDTMRNILGTKVNITKGKKSGKI 242
Query: 277 CIKYETNEQLKIICSLL 293
I+Y ++E L+ I ++L
Sbjct: 243 EIEYYSDEDLEAIINML 259
>gi|221142668|ref|ZP_03567161.1| ParB family partitioning protein [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|262048924|ref|ZP_06021804.1| hypothetical protein SAD30_0770 [Staphylococcus aureus D30]
gi|262052849|ref|ZP_06025034.1| hypothetical protein SA930_1147 [Staphylococcus aureus 930918-3]
gi|284023369|ref|ZP_06377767.1| ParB-like partition protein [Staphylococcus aureus subsp. aureus
132]
gi|259159250|gb|EEW44309.1| hypothetical protein SA930_1147 [Staphylococcus aureus 930918-3]
gi|259162996|gb|EEW47558.1| hypothetical protein SAD30_0770 [Staphylococcus aureus D30]
gi|302750232|gb|ADL64409.1| chromosome/plasmid partitioning protein ParB [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|315198041|gb|EFU28373.1| possible ParB family partitioning protein [Staphylococcus aureus
subsp. aureus CGS01]
gi|329313053|gb|AEB87466.1| Chromosome partioning ParB family protein [Staphylococcus aureus
subsp. aureus T0131]
Length = 278
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 90/274 (32%), Positives = 155/274 (56%), Gaps = 5/274 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
S ++ T+T E I I I PNP+ PR F+ L DL SIK +GI+QP+++R
Sbjct: 2 SKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRK 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EEA
Sbjct: 62 TVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAES 120
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LV 200
Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT +
Sbjct: 121 YQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLLAIK 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
L LA+ +V +K SVR E V E N + + + K K++ E+++ +
Sbjct: 181 DEQQMLRLAKRVVKEKWSVRYLENHVNELKN-VSSKSETDKVDITKPKFIKQQERQLREQ 239
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
G + I + + G+ ++++ E I L
Sbjct: 240 YGTKVDISIKKSVGKISFEFDSQEDFVRIIEQLN 273
>gi|218258103|ref|ZP_03474515.1| hypothetical protein PRABACTJOHN_00169 [Parabacteroides johnsonii
DSM 18315]
gi|218225766|gb|EEC98416.1| hypothetical protein PRABACTJOHN_00169 [Parabacteroides johnsonii
DSM 18315]
Length = 295
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 100/299 (33%), Positives = 164/299 (54%), Gaps = 16/299 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL ALI + +E I PNP PR+ FE E LE
Sbjct: 3 MKRSALGRGLDALITMDDLKTGGSSSISEIELS--------KIQPNPDQPRSVFEEETLE 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+S G+IQP+ ++ Y II+GERR+RA+ MA L +P I+ +++ +E+
Sbjct: 55 ELATSIRSLGVIQPITLKETGTDKYMIISGERRYRASLMAGLERIPAYIKTAADENVVEM 114
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +E AL Y++LI YG TQ + VGK R+ +AN LR+LKLP+ ++
Sbjct: 115 ALIENIQREDLNSIEIALAYQKLIDSYGLTQEKLSERVGKKRATIANYLRLLKLPAEIQV 174
Query: 185 MIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
++ ++I +GHAR L+ DP + I+ +SVR+ EE+V+ + + E
Sbjct: 175 GLKDKKIDMGHARALLPVEDPEVQLALYEQILVDGLSVRNVEEIVRGGVDAAALEQAKKE 234
Query: 242 GSREKEKYLTD----LEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+++ L + L+ +SS I + + KG+ I + + ++L+ + LL +
Sbjct: 235 KPAQRKPKLPEEFNLLKDHLSSFFNTKIQLVCNEKGKGKITIPFASEDELERLIGLLDK 293
>gi|298345824|ref|YP_003718511.1| stage 0 DNA-binding protein family protein [Mobiluncus curtisii
ATCC 43063]
gi|304390472|ref|ZP_07372425.1| stage 0 DNA-binding protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|298235885|gb|ADI67017.1| stage 0 DNA-binding protein family protein [Mobiluncus curtisii
ATCC 43063]
gi|304326228|gb|EFL93473.1| stage 0 DNA-binding protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 340
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 100/340 (29%), Positives = 162/340 (47%), Gaps = 50/340 (14%)
Query: 1 MSNNYSKRRLGRGLAALIGEV--------------------------------------- 21
M+ KR LG GL ALI
Sbjct: 1 MA---KKRALGSGLGALIPSAPVEPRGVDVLVPPKPGTNPTKGNDKVHDLLSPDAMQRKT 57
Query: 22 -NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + + + + SI N PR F+ + L +L SI+S GI+QP+
Sbjct: 58 AKTADSTEPNLVPVPGMTVQELPVTSITANRSQPREIFDEDALAELANSIRSVGILQPVT 117
Query: 81 VRAIDNGL---YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
VR I++G Y+++ GERR RAAK+A LS +P IIR+ + A++EN+QR +LNP
Sbjct: 118 VRQIESGPKPLYELVMGERRLRAAKLAGLSTIPAIIRDTADDEMGVNALLENIQRVNLNP 177
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA Y+Q+I E G TQ + + +SR +AN LR+LKLP++V+ + +S GHAR
Sbjct: 178 LEEAAAYQQMIEELGVTQETLAKRLSRSRPQIANTLRLLKLPAAVQVQVAAGVLSAGHAR 237
Query: 198 TLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK-EKYLTDL 253
L+ LAQ IV++ +SVR TEE+V DN + + + ++
Sbjct: 238 ALLALDDPEAMTQLAQRIVAEGLSVRATEEIVAVGDNTDSPTAQPKKRQVTPLSPDMMEM 297
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++ + ++++ KG+ I++ ++ L I ++
Sbjct: 298 KSQLEDALQTRVNLQVGKTKGKVTIEFADSDDLARIAKII 337
>gi|225016771|ref|ZP_03705963.1| hypothetical protein CLOSTMETH_00683 [Clostridium methylpentosum
DSM 5476]
gi|224950439|gb|EEG31648.1| hypothetical protein CLOSTMETH_00683 [Clostridium methylpentosum
DSM 5476]
Length = 286
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 102/300 (34%), Positives = 161/300 (53%), Gaps = 16/300 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LG+GL AL + + S + + I PN + PR F+
Sbjct: 1 MA---RKSGLGKGLDALFLDNSAEESSS-----------TTMKLTDIEPNKNQPRKTFDE 46
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L L SI+ HG+IQPL+VR + G Y+IIAGERR+RA +M L+EVPV+I+ +D+K
Sbjct: 47 AALTTLADSIRQHGVIQPLVVRPLSTGGYQIIAGERRWRACRMLGLAEVPVLIKEMDDKQ 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLNP+EEALGY+QL+ EY TQ+ + + VGKSR VAN LR+L LP
Sbjct: 107 VMEVALIENLQREDLNPIEEALGYKQLMDEYDLTQDQVATRVGKSRPAVANALRLLNLPK 166
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V ++ +S G A+ ++S D + + EL + + + +
Sbjct: 167 QVIGLVENGNLSFGQAKAILSFEDETDMITMANLAVRKGMTVRELEKLSKKSAKAERTVP 226
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGENDFE 299
S+ ++ Y +LE + ++ I I + +G I + + E+L + L + E
Sbjct: 227 LKSK-RDHYYDELEIAMRDELHRKIKIDLAKEEQGTLHIDFYSKEELADLARRLTNMNEE 285
>gi|300173932|ref|YP_003773098.1| chromosome partitioning protein ParB [Leuconostoc gasicomitatum LMG
18811]
gi|299888311|emb|CBL92279.1| Chromosome partitioning protein parB [Leuconostoc gasicomitatum LMG
18811]
Length = 299
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 93/278 (33%), Positives = 152/278 (54%), Gaps = 10/278 (3%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + K T ES I + I NP PR++F + L++L QSIK +G++ P+
Sbjct: 23 EEALAHTKSVTKKVTDGESIVLIELPDIEVNPFQPRHHFNDDKLQELAQSIKENGVLTPI 82
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
IVR N Y+IIAGERR RA+K+A L + IIR+VD+ + +A++EN+QR DL+ +E
Sbjct: 83 IVRRY-NKKYQIIAGERRVRASKLADLVHISAIIRDVDDDTMAAVALIENLQRDDLDAIE 141
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART- 198
EA Y+ L+ + TQ + +GK R+ V N LR+LKLP +V+ ++ +++S+GHAR
Sbjct: 142 EAQAYDGLMKQLQLTQTQVAEKIGKDRTTVTNALRLLKLPQTVQTLVETDDLSMGHARAL 201
Query: 199 --LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
L + +AQ IV + ++VR E LV+ ++ + + + + +
Sbjct: 202 LGLKDKTQIEKIAQSIVMQGLNVRQVESLVRNMND-----GSTDKTVKTVSPFAMSVATQ 256
Query: 257 ISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ K G + + G+ I Y +N+ L I +LL
Sbjct: 257 LEEKFGTKVKVNAGSKGNGKIEINYMSNDDLSRILNLL 294
>gi|238917968|ref|YP_002931485.1| chromosome partitioning protein, ParB family [Eubacterium eligens
ATCC 27750]
gi|238873328|gb|ACR73038.1| chromosome partitioning protein, ParB family [Eubacterium eligens
ATCC 27750]
Length = 311
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 173/305 (56%), Gaps = 9/305 (2%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPE-------SQDCISIHSIVPNPHNP 54
S R LG+G+AALI E + + D K ++ + I I PN + P
Sbjct: 8 SKISKSRGLGKGIAALIPEDDGNEDKVVVKEVVKEVVKEVPVPTETKLKISQIEPNKNQP 67
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
R F+ + L +L +SIK +G++QPL+V+ +D Y+IIAGERRFRAA++A + EVPVII+
Sbjct: 68 RKAFDEDALIELSESIKQYGVLQPLLVQKMDKN-YQIIAGERRFRAARLAGVKEVPVIIK 126
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+ ++ +EIA++EN+QR+DLNP+EEAL Y QLI +Y Q+++ V KSR+ + N LR
Sbjct: 127 DYSSQEVMEIALIENIQREDLNPIEEALAYRQLIKDYRLKQDEVAEKVAKSRTAITNSLR 186
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+LKL V+EM+ + ++S GHAR ++ D V + ++ + N +
Sbjct: 187 LLKLDDRVQEMVIEGKLSSGHARAIIGIEDKEKQYMVALKIFDEKLSVRDVEKLVKNIDK 246
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLL 293
K + + E + D E+K+ +G + I NNKG+ I+Y + +L+ I LL
Sbjct: 247 LDKTVEKKKPENDFVYRDFEEKLKKIMGTQVVIKNKNNNKGKIEIQYYSQAELERIYDLL 306
Query: 294 GENDF 298
+ +
Sbjct: 307 KKVNE 311
>gi|326314889|ref|YP_004232561.1| parB-like partition protein [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323371725|gb|ADX43994.1| parB-like partition protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 312
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 103/310 (33%), Positives = 170/310 (54%), Gaps = 19/310 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGE--VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ K LGRGL AL+G + + + P + + + +VP + PR
Sbjct: 1 MATKKPK-GLGRGLEALLGPKVAEAAPGAEASASAAAPGAPSTLPLDDMVPGIYQPRTRM 59
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
+ L +L +SIK+ GI+QP++VR + G Y+IIAGERRFRAA++A L+EVPV++R
Sbjct: 60 DEGALYELAESIKAQGIMQPILVRRLAQGENAGRYEIIAGERRFRAARIAGLAEVPVLVR 119
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
V ++S+ +A++EN+QR+DLNPLEEA G +L+ E+G T VG+SRS +N+LR
Sbjct: 120 EVPDESAAAMALIENIQREDLNPLEEAQGLARLVKEFGLTHEQAAQAVGRSRSAASNLLR 179
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNK 232
+L L V+ M+ +I +GHAR L+S + I ++K+SVR+ E LV++
Sbjct: 180 LLNLAEPVQTMLMAGDIDMGHARALLSLDRAAQITAGNQIAARKLSVREAEGLVKKI-GA 238
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-K--------GQFCIKYETN 283
+ K + L +E+++S + + ++ + K G+ I++ +
Sbjct: 239 EFSLAPQKARKEGKSRDLKRVEEELSDLLMAEVEVRVKKRVKRGGRTEEVGELAIQFGSL 298
Query: 284 EQLKIICSLL 293
E L + L
Sbjct: 299 EALNGLIERL 308
>gi|46581761|ref|YP_012569.1| ParB family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46451184|gb|AAS97829.1| ParB family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|311232320|gb|ADP85174.1| parB-like partition protein [Desulfovibrio vulgaris RCH1]
Length = 304
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 93/302 (30%), Positives = 160/302 (52%), Gaps = 28/302 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N R LGRGL AL + + + + + S+ PNP PR +F+
Sbjct: 1 MAGNQ--RGLGRGLDALFKNTVEPSAASD---------ITSLPVRSLAPNPAQPRKHFDE 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRA---IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
L++L SI++ G++QPL+VR + Y+IIAGERR+RA+++A L EVPV++R++
Sbjct: 50 SALQELADSIRAKGVLQPLLVRPVRGTEPQQYEIIAGERRWRASRLAGLREVPVLVRDLS 109
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ +L +A++EN+QR+DLNP+EEAL L ++ +Q ++ +GKSR VAN LR+L+
Sbjct: 110 DQETLAVALIENLQREDLNPVEEALAMHDLREQFSLSQEELARQLGKSRPAVANTLRLLQ 169
Query: 178 LPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK-- 232
LP + +R ++ GHAR + + +L I+ + ++VRD E
Sbjct: 170 LPQESLDDVRSGRLTPGHARALLGVTDQTAQETLRSAIIEQSLTVRDAEAAATYWKEHGT 229
Query: 233 ---------KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETN 283
+ + R K + L+K+I+ + L S+ KG+ I +++
Sbjct: 230 LPDTLAHVPHRAQTPRNKAMRTKTPEVKLLQKRIADTLSLKASVSGTEQKGRVTIAFDSP 289
Query: 284 EQ 285
+
Sbjct: 290 DD 291
>gi|313887726|ref|ZP_07821408.1| stage 0 sporulation protein J [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846335|gb|EFR33714.1| stage 0 sporulation protein J [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 283
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 13/289 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K+ LGRG IG S + + E ISI IV N PR F+ E L+
Sbjct: 2 TKKKGLGRG----IGNFLNSSEKIREVIEEERSKLMEISIEDIVANEGQPRKNFDQEELK 57
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
DL SIK +GIIQPL+++ ++ Y+IIAGERRFRAA++A L VP I++++ + S I
Sbjct: 58 DLASSIKKYGIIQPLLLKKKEDK-YEIIAGERRFRAARLAGLERVPAIVKDISDDESSRI 116
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
AI+EN+QRKDLNP+EEA+ Y L+ TQ ++ +GKSR ++ N +R+L L V +
Sbjct: 117 AIIENIQRKDLNPVEEAMSYRHLLDSQDLTQKELADEIGKSRQYIGNTIRLLNLDPRVLK 176
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++ +E+IS H + L+S D + + N +K K
Sbjct: 177 LLEEEKISTSHGKKLLSIKDGDKQYKEAMRIIKDS--------LPVNDNKKTVKTPRVQE 228
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+++ +L D+ K+ +G ++ K R G+ I+Y E L I L+
Sbjct: 229 KEDIFLVDMRTKVERTLGTKVNFKKRGKVGKIEIEYYGEEDLSRILDLI 277
>gi|21282065|ref|NP_645153.1| hypothetical protein MW0336 [Staphylococcus aureus subsp. aureus
MW2]
gi|21203501|dbj|BAB94201.1| MW0336 [Staphylococcus aureus subsp. aureus MW2]
Length = 278
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 90/274 (32%), Positives = 155/274 (56%), Gaps = 5/274 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
S ++ T+T E I I I PNP+ PR F+ L DL SIK +GI+QP+++R
Sbjct: 2 SKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRK 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EEA
Sbjct: 62 TVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAES 120
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LV 200
Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT +
Sbjct: 121 YQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLLAIK 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
L LA+ +V +K SVR E V E N + + + K K++ E+++ +
Sbjct: 181 DEQQMLRLAKRVVKEKWSVRYLENHVNELKN-VSSKSETDKVDITKPKFIKQQERQLREQ 239
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
G + I + + G+ ++++ E I L
Sbjct: 240 YGTKVDISIKKSVGKISFEFDSQEDFLRIIEQLN 273
>gi|260887468|ref|ZP_05898731.1| stage 0 sporulation protein J [Selenomonas sputigena ATCC 35185]
gi|330840107|ref|YP_004414687.1| parB-like partition protein [Selenomonas sputigena ATCC 35185]
gi|260862755|gb|EEX77255.1| stage 0 sporulation protein J [Selenomonas sputigena ATCC 35185]
gi|329747871|gb|AEC01228.1| parB-like partition protein [Selenomonas sputigena ATCC 35185]
Length = 377
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 102/347 (29%), Positives = 169/347 (48%), Gaps = 59/347 (17%)
Query: 6 SKRRLGRGLAALIG---------------------EVNQSIDSPEKKTETIPES------ 38
+ LG+GL AL E + +++P++ + E+
Sbjct: 5 KHQALGKGLGALFPTELKTPEVSQKESPQLSDTNAEEKKRMEAPQEAEKESAENSNPQGN 64
Query: 39 -------------------------QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
I +H I N + PR+ F+ L++L +SI H
Sbjct: 65 EGASQVAIEDDEAIDVIPKEMNGIAVQQIPLHEIQANRYQPRHEFDESALDELKESIVQH 124
Query: 74 GIIQPLIVRAIDNGLYKI-IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G++QP++VR + G +AGERRFRA+++A L VP ++R + + +S EIA++EN+QR
Sbjct: 125 GVLQPILVRQLPAGKGYELVAGERRFRASRLAGLETVPALVRPLSDAASTEIALIENLQR 184
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
+DLN +EEA Y L+ +G TQ + VG+SRSH+ N++R+LKL + V+E + +S
Sbjct: 185 EDLNAIEEANAYRNLLQNFGLTQEALAERVGRSRSHITNMMRLLKLDAHVQEYLANGSLS 244
Query: 193 LGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK- 248
+G AR LV +D A +I++++ S R EELV+ E+ + E +E
Sbjct: 245 MGQARPLVVLTDAALQREAADIIMARECSARQAEELVKRLQKNAEETAEAKEAESPEETE 304
Query: 249 --YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+L + E K+ G + I+ R K + I + + E L I L
Sbjct: 305 KIFLQEAEDKLKMFFGTQVRIRSRGKKNRIEIDFSSEEDLNRILDSL 351
>gi|313681126|ref|YP_004058865.1| chromosome segregation DNA-binding protein [Oceanithermus profundus
DSM 14977]
gi|313153841|gb|ADR37692.1| chromosome segregation DNA-binding protein [Oceanithermus profundus
DSM 14977]
Length = 270
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 114/296 (38%), Positives = 162/296 (54%), Gaps = 31/296 (10%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS R LGRGL AL+ + + I PNP PR F+
Sbjct: 1 MSRKP--RGLGRGLDALLP--------------KTGGHPTRLPLALIRPNPDQPRRRFDE 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L SI G++QPL+VR G Y+++AGERRFRAA+MA LSEVPV++R +D+++
Sbjct: 45 AALAELAASIAKQGLLQPLLVRPRGEG-YELVAGERRFRAAQMAGLSEVPVVVRELDDRT 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+A+VEN+QR+DLNP+EEALGY++L E G+ Q +I VGK+RS VAN LR+L+L
Sbjct: 104 ALELALVENLQREDLNPIEEALGYQRL-VEMGHAQAEIAEAVGKARSTVANALRLLQLDE 162
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+ +E + + IS GHAR + + L Q IV + +SVR E L K RK
Sbjct: 163 ASQEALAEGRISAGHARALLMAPPGERPQLLQRIVGEGLSVRQAERLASRPKKKPAARKA 222
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+L + + ++GL + KG+ I Y + E+L I LG
Sbjct: 223 A----------YAELARDLERQLGLKVRFT-GEGKGRLEIFYYSEEELNAILERLG 267
>gi|289705886|ref|ZP_06502265.1| ParB-like partition protein [Micrococcus luteus SK58]
gi|289557371|gb|EFD50683.1| ParB-like partition protein [Micrococcus luteus SK58]
Length = 457
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 89/280 (31%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + E I + I PNP PR F+ + + +L SI+ GI+QP
Sbjct: 165 ADSTADPVATEGTVSADIAVLREIPVGDIHPNPRQPREVFDEDHMAELVTSIREVGILQP 224
Query: 79 LIVRAIDNGLYKI-IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
++VR +D I GERR+RA + A L +P I+R + L A++E++ R LNP
Sbjct: 225 IVVREVDGPTPYELIMGERRWRATQKAGLDTIPAIVRQTPEQDLLRDALLEDLHRSQLNP 284
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA Y+QL+ ++ TQ ++ +G+SR ++N LR+LKLP V+ + +S GHAR
Sbjct: 285 LEEAAAYQQLMEDFACTQEELSQRIGRSRPQISNTLRLLKLPPLVQRRVAAGTLSAGHAR 344
Query: 198 T---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE-KEKYLTDL 253
L SD LAQ I S+ +SVR TEE V + + + + + + L
Sbjct: 345 ALLGLTDPSDMERLAQRIQSEGLSVRATEEAVAQLQGGLRPGRTPRRSTDDARHERLDHY 404
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++S++ + I KG+ I + T E L I L+
Sbjct: 405 ATALTSRLDTAVKITLGARKGRIAIDFTTVEDLNRIMDLI 444
>gi|15616619|ref|NP_244925.1| stage 0 sporulation protein J [Bacillus halodurans C-125]
gi|10176682|dbj|BAB07776.1| stage 0 sporulation protein J [Bacillus halodurans C-125]
Length = 288
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 104/290 (35%), Positives = 172/290 (59%), Gaps = 15/290 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+GL A E E + + + + PNP+ PR F E L++L
Sbjct: 3 KGLGKGLNAFFPEAADETT----------EQVEEVKLLELRPNPYQPRKTFLEEALQELA 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HGI+QP++VR Y+I+ GERRFRAA+ A L +VPV+IR +D++ +E+A++
Sbjct: 53 DSIKEHGILQPIVVRKSSVKGYEIVVGERRFRAAERAGLVKVPVVIRELDDQKMMEMALI 112
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+EEA YE+L++ TQ + +GKSR H+AN LR+L+LP V+E I
Sbjct: 113 ENLQREDLNPIEEANAYEKLMTHLQMTQEQLAVRLGKSRPHIANHLRLLQLPKVVQEFIS 172
Query: 188 KEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ ++S+GH R L + ++ S+ I+ +K+SVR E LVQ+ + + + K +
Sbjct: 173 EGKLSMGHGRALLGLANKNEISSVLNKILEEKLSVRQVEALVQQMNERVSRGTK--KAKP 230
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ +L + + + S G +++IK KG+ I++ +++ L+ I +L
Sbjct: 231 KLSPFLKERQDFLRSHFGTSVAIKKGKKKGKIEIEFFSDDDLERILEMLS 280
>gi|300771587|ref|ZP_07081462.1| chromosome partitioning protein SpoOJ [Sphingobacterium
spiritivorum ATCC 33861]
gi|300761576|gb|EFK58397.1| chromosome partitioning protein SpoOJ [Sphingobacterium
spiritivorum ATCC 33861]
Length = 308
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 87/266 (32%), Positives = 150/266 (56%), Gaps = 6/266 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
S + I + I NP PR F+ + L++L +SI+ G+IQP+ VR + + Y++I+
Sbjct: 41 KTSGSINFIKVDEITVNPFQPRTDFDEQALQELSESIQLQGLIQPITVRQVGDNAYQLIS 100
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR RA+K+A ++ +P +R +++ LE+A++EN+QR++LN +E AL ++++I E
Sbjct: 101 GERRLRASKLAGITSIPAYVRTANDQQMLEMALIENIQRENLNAIEVALSFQRMIEECNL 160
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
Q ++G V K+RS V N LR+LKLP ++ IR ++S+GHAR + L + +
Sbjct: 161 KQEELGDRVSKNRSTVTNYLRLLKLPPVIQAAIRDGQLSMGHARALINVGEVDKQLYIFK 220
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
I+ K +SVR E+LV+E ++K + +E ++SK + + +
Sbjct: 221 EIIEKGLSVRKAEQLVREVQQAVARKKAPSDKKTALTFQFQKIEDDLASKFASRVKLNVK 280
Query: 271 ---NNKGQFCIKYETNEQLKIICSLL 293
KG I +E+ + L I LL
Sbjct: 281 SSTKGKGAIEIPFESEDDLSRILELL 306
>gi|91202996|emb|CAJ72635.1| strongly similar to chromosome partitioning protein [Candidatus
Kuenenia stuttgartiensis]
Length = 334
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 105/295 (35%), Positives = 168/295 (56%), Gaps = 15/295 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N L +GL +L+G V E+ ++ + I PN PRN F+
Sbjct: 47 MAKNE---GLSKGLQSLLGGVIGIESQQEEGV------IIQLNPNDIKPNSMQPRNLFKE 97
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ DL SIK HGI+QP+IV +G Y +IAGERR+RAAK + +VP I+R D++S
Sbjct: 98 AEMHDLMASIKKHGILQPIIVTPTAHG-YMLIAGERRWRAAKELGMKKVPAIVRKTDDES 156
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LEIA++EN+QR+DLNP+E+ALG+ +L+ ++G+TQ + +GK RS VAN LR+L+LP
Sbjct: 157 LLEIALIENIQREDLNPIEKALGFRELVKKFGFTQEQVAHAMGKDRSSVANYLRLLELPD 216
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIV---SKKMSVRDTEELVQEQDNKKEKRK 237
++ + + IS+GHAR L+S + + + +SVRD E +V + N ++ K
Sbjct: 217 EIQGHVSRGTISMGHARALLSLHEKEMQIKYCTIIIKEGLSVRDVESMVAGEKNLRKPEK 276
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
+ ++ D+E + G + I+ R+ +GQ I + NE+ + I +
Sbjct: 277 RPERKLPT--PHIADIEDRFRKHFGAKVKIRERHGRGQITIAFNNNEEFERIANK 329
>gi|312865850|ref|ZP_07726072.1| stage 0 sporulation protein J [Streptococcus downei F0415]
gi|311098725|gb|EFQ56947.1| stage 0 sporulation protein J [Streptococcus downei F0415]
Length = 292
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 90/259 (34%), Positives = 149/259 (57%), Gaps = 7/259 (2%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ + I PNP PR F+ E LE+L SIK +G+IQP+IVR D Y++IAGERR
Sbjct: 39 ELKELKLSDISPNPFQPRLNFKQEELEELANSIKENGLIQPIIVRKSDVFGYELIAGERR 98
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
FRA ++A L +P II+ + ++ S AI+EN+QR +LNP+EEA Y+ L+ T +
Sbjct: 99 FRACQLAQLETIPAIIKELSDQDSRIQAIIENLQRSNLNPIEEAKAYKNLLETSQMTHEE 158
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKM 217
I +GKSR ++ N LR+L L + +++ + +S GHAR L+ S+ LA +
Sbjct: 159 IAKYMGKSRPYITNFLRLLNLSAPLQKALEDGSLSSGHARLLLGLSEEDQLAWL-----N 213
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEGSREK-EKYLTDLEKKISSKVGLNISIKHRNNK-GQ 275
++D + V++ + + + + + +K + + DLE+++S +G+ +S+ N K G+
Sbjct: 214 KIKDNKLSVRKLERQLNLKTRPKQKKSKKGDLFQRDLEEELSRSLGMPVSLSMTNKKSGK 273
Query: 276 FCIKYETNEQLKIICSLLG 294
I + T E L I + L
Sbjct: 274 LSISFSTPEDLNRIINRLK 292
>gi|296131536|ref|YP_003638786.1| parB-like partition protein [Cellulomonas flavigena DSM 20109]
gi|296023351|gb|ADG76587.1| parB-like partition protein [Cellulomonas flavigena DSM 20109]
Length = 383
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 88/280 (31%), Positives = 149/280 (53%), Gaps = 4/280 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + + + SI PNP PR F+ + L +L SI+ G++QP++
Sbjct: 99 APGAAKEIDGLVPVPGARFAELPVGSIRPNPRQPRTVFDEDALAELVGSIREIGVLQPVV 158
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR Y++I GERR+RA + A LS +P IIR + L A++EN+ R LNPLEE
Sbjct: 159 VRE-AADGYELIMGERRWRATQEAGLSTIPAIIRETEESDLLRDALLENLHRSQLNPLEE 217
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+QL+ ++G T +++ + + +SR ++N LR+L+LP V+ + +S GHAR L+
Sbjct: 218 AAAYQQLLDDFGCTHDELATRIHRSRPQISNTLRLLRLPPLVQRRVAAGVLSAGHARALL 277
Query: 201 ---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ LAQ IVS+ +SVR EE+V ++K +K + + + L DL ++
Sbjct: 278 GLGDGAAIERLAQRIVSEGLSVRAVEEIVSLGGDEKSPARKPRTRAGIRNEALDDLASRL 337
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
S K + + +G+ +++ + + L I + L D
Sbjct: 338 SDKFETRVKVDLGKTRGRLTVEFASVQDLNRILATLAPED 377
>gi|322412914|gb|EFY03821.1| chromosome partitioning protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 257
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 94/258 (36%), Positives = 155/258 (60%), Gaps = 5/258 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E I I IV NP+ PR F + LEDL SIK++G+IQP+IVR D Y+++AGER
Sbjct: 3 ELLKSIPIEDIVANPYQPRLQFNQKELEDLANSIKTNGLIQPIIVRKSDIFGYELVAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RF+A+KMA L++VP I++N+ + S++ AIVEN+QR DLNP+EEA Y+ LI + T
Sbjct: 63 RFKASKMAGLTKVPAIVKNMSSLESMQQAIVENLQRADLNPIEEAKAYQLLIEKNQMTHE 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ +GKSR +++N LR+L+LP + + + + +IS GHAR L++ +D
Sbjct: 123 EVAKYMGKSRPYISNTLRLLQLPKIISKAVEEGDISAGHARALLTLTDEKEQLVYA---- 178
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQ 275
+++ V++ ++ + K + K ++T LE +++ +GL + IK ++ GQ
Sbjct: 179 NRIKNEGLSVRQIEHMVTPKLKSTPIPKNKNIFITSLEDQLAQSLGLPVKIKLKSTQSGQ 238
Query: 276 FCIKYETNEQLKIICSLL 293
+ + E+L I + L
Sbjct: 239 LLLPFANQEELNRIINKL 256
>gi|254496644|ref|ZP_05109507.1| chromosome partitioning protein ParB [Legionella drancourtii
LLAP12]
gi|254354072|gb|EET12744.1| chromosome partitioning protein ParB [Legionella drancourtii
LLAP12]
Length = 289
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 96/292 (32%), Positives = 173/292 (59%), Gaps = 10/292 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGR L+AL+ + + + + E++ +++ + P + PR E L
Sbjct: 3 VKRSGLGRNLSALLSQPATILLNEKPAAESL-----KLAVECLQPGKYQPRGEMEEAPLI 57
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SIK G++QPLIVR + +G Y+IIAGERR+RA+++A LSEVPVI++ VD+++++ +
Sbjct: 58 ELAESIKKQGLLQPLIVRELSDGRYEIIAGERRWRASQLAGLSEVPVILKQVDDETAMAM 117
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLN +++A +L E+ T + ++ KSR+ V+N LR+L L ++V++
Sbjct: 118 ALVENLQREDLNAMDQARAMHRLTDEFSLTHQQVADLLCKSRTAVSNYLRLLALSTAVKK 177
Query: 185 MIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ +I +GHAR ++ +AQ+IV+K +SVR+TE+LV+ K + I
Sbjct: 178 LLEHGDIDMGHARALLMLEEEQQNQVAQLIVAKNLSVRETEKLVERVKAGKAAEEAIPVA 237
Query: 243 SREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ Y + ++ + I +K + KG I Y++++ L+ I L
Sbjct: 238 MP--DFYYQEQVNNLARLLQTAIKLKPGKAGKGSLVIHYDSSQSLQKIIEQL 287
>gi|159901320|ref|YP_001547567.1| parB-like partition protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159894359|gb|ABX07439.1| parB-like partition protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 322
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 106/328 (32%), Positives = 169/328 (51%), Gaps = 41/328 (12%)
Query: 3 NNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
N KR LG+GL ALI + + + + I SI NPH PR F E
Sbjct: 1 MNPKKRGLGQGLGALI-------RPDPTTSMPMVGALHSVPIESIEANPHQPRQIFTPEA 53
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
LE+L SI +HGI+QPL+V G Y++IAGERR+RAA+ A LSEVPVII+ V + L
Sbjct: 54 LEELSASIATHGILQPLVVTRTATG-YELIAGERRWRAAQQAGLSEVPVIIKEVTPQERL 112
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A+VEN+QR DLNPLEEA Y+ L E+ + I VGKSR + N LR+LKLPS +
Sbjct: 113 ELALVENIQRADLNPLEEAQAYQLLHDEFSLSHQAIAERVGKSRPAITNALRLLKLPSPL 172
Query: 183 REMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++ + +++++ GH + L++ D + + I+ ++SVR+ E++ Q ++ + +
Sbjct: 173 QQAVMEQQLTAGHLKQLITIDDERTQILAMEQILEFRLSVREAEKMAQLIKHESQTPAQA 232
Query: 240 FEGSREK------------------------------EKYLTDLEKKISSKVGLNISIKH 269
+++ T +++ ++G + +K
Sbjct: 233 RIAIQQRGAAPRASRRNGAPTPAAPTRNSIPAEPVVPNVDDTAAVDQLTRQLGTKVEVKR 292
Query: 270 RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ N G I + ++EQL + L +
Sbjct: 293 QGNGGYVRIDFYSDEQLIALIESLLNGE 320
>gi|258424587|ref|ZP_05687464.1| ParB-like partition protein [Staphylococcus aureus A9635]
gi|282915682|ref|ZP_06323453.1| chromosome partitioning protein [Staphylococcus aureus subsp.
aureus D139]
gi|283768088|ref|ZP_06341003.1| chromosome partitioning protein ParB family protein [Staphylococcus
aureus subsp. aureus H19]
gi|257845182|gb|EEV69219.1| ParB-like partition protein [Staphylococcus aureus A9635]
gi|282320498|gb|EFB50837.1| chromosome partitioning protein [Staphylococcus aureus subsp.
aureus D139]
gi|283461967|gb|EFC09051.1| chromosome partitioning protein ParB family protein [Staphylococcus
aureus subsp. aureus H19]
gi|298693698|gb|ADI96920.1| Chromosome partitioning protein ParB [Staphylococcus aureus subsp.
aureus ED133]
gi|323438820|gb|EGA96558.1| ParB-like partition protein [Staphylococcus aureus O11]
gi|323442583|gb|EGB00211.1| ParB-like partition protein [Staphylococcus aureus O46]
Length = 281
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 155/277 (55%), Gaps = 5/277 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
S ++ T+T E I I I PNP+ PR F+ L DL SIK +GI+QP++
Sbjct: 2 SELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIV 61
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
+R G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EE
Sbjct: 62 LRKTVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEE 120
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART-- 198
A Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT
Sbjct: 121 AESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLL 180
Query: 199 -LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ L LA+ +V +K SVR E V E N + + + K K++ E+++
Sbjct: 181 AIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKN-VSSKSETDKVDITKPKFIKQQERQL 239
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ G + I + + G+ ++E+ + I L
Sbjct: 240 REQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLN 276
>gi|289427486|ref|ZP_06429199.1| ParB-like protein [Propionibacterium acnes J165]
gi|289159416|gb|EFD07607.1| ParB-like protein [Propionibacterium acnes J165]
Length = 306
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 167/309 (54%), Gaps = 17/309 (5%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M+ +S LGRG L + S D + IS+ I P
Sbjct: 1 MAAKHS--GLGRGFGELFQRTDLDDDDEERVDDASTDGDAINERVGGSRLELISVDEISP 58
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N PR F E L +L +SI++ G++QP++V DNG Y+++ GERR+RAA+ A L+ V
Sbjct: 59 NARQPRKMFNEEELTELSESIRTVGVLQPVVVTPADNG-YELVMGERRWRAARKAGLATV 117
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 118 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQI 177
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + EI+ GHAR L++ +P A +V + +SVR TEELV
Sbjct: 178 ANTIRLLKLSADVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELV 237
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
++ + + K ++ L +++S + + ++ RN +G + NE+L
Sbjct: 238 RQTLDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEEL 297
Query: 287 KIICSLLGE 295
+ + + +
Sbjct: 298 ERLIDIFSD 306
>gi|49481180|ref|YP_039469.1| stage 0 sporulation protein J [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49332736|gb|AAT63382.1| stage 0 sporulation protein J [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 256
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 97/258 (37%), Positives = 157/258 (60%), Gaps = 7/258 (2%)
Query: 44 IHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKM 103
I + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+AGERR+RAAK
Sbjct: 2 ITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKE 60
Query: 104 ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVG 163
A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E TQ + +G
Sbjct: 61 AGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLG 120
Query: 164 KSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQVIVSKKMSVR 220
KSR ++AN R+L LPS V++MI ++S+ H RTL++ D L + I + ++VR
Sbjct: 121 KSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVR 180
Query: 221 DTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIK 279
E++VQE + + K + +E+ + + E + K G ++ IK + KG+ I+
Sbjct: 181 QLEKIVQEINQSVSRETKQVK--KERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIE 238
Query: 280 YETNEQLKIICSLLGEND 297
+ E L I LL + +
Sbjct: 239 FFNKEDLNRILELLAQKN 256
>gi|117927024|ref|YP_867641.1| chromosome segregation DNA-binding protein [Magnetococcus sp. MC-1]
gi|117610780|gb|ABK46235.1| chromosome segregation DNA-binding protein [Magnetococcus sp. MC-1]
Length = 305
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 103/287 (35%), Positives = 169/287 (58%), Gaps = 19/287 (6%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA---- 83
E +++ SI PNP+ PR + + L+DL SIK G++QP++VR
Sbjct: 17 EEAVDAGEKHRVRSVAVESIRPNPYQPRRIIKEDALKDLADSIKQQGVLQPILVRKAAGA 76
Query: 84 -IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
+Y++IAGERR+RA ++A L+E+PVI+++ D+ +LE+A++ENVQR+DL LE A
Sbjct: 77 KKGEPIYELIAGERRWRATQLAGLTEIPVILKDWDDNRALEVALLENVQREDLTALETAR 136
Query: 143 GYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV-- 200
GYE+LI E+GY+ IG +GKSR V+N LR+L+LP + E++ +E+IS GHAR L+
Sbjct: 137 GYERLIQEFGYSHAQIGERIGKSRMAVSNALRLLQLPQPIVELLEQEKISAGHARALLGL 196
Query: 201 --STSDPLSLAQVIVSKKMSVRDTEELVQ---------EQDNKKEKRKKIFEGSREKEKY 249
+ + +A I+ + +SVRD E LV+ E ++ + K R+K+
Sbjct: 197 GDNVRVMIIVANRIIDEVLSVRDAEALVRDHAQLAEVEETEDSSKDATKKKAKGRQKDTT 256
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICS-LLGE 295
+T E++++ +SI H KG+ + Y + E+L+ + LL +
Sbjct: 257 ITTWEEQLAQSFATRVSITHAKGKGKIILNYASMEELEKMMESLLKQ 303
>gi|160944283|ref|ZP_02091512.1| hypothetical protein FAEPRAM212_01792 [Faecalibacterium prausnitzii
M21/2]
gi|158444465|gb|EDP21469.1| hypothetical protein FAEPRAM212_01792 [Faecalibacterium prausnitzii
M21/2]
gi|295103705|emb|CBL01249.1| chromosome segregation DNA-binding protein [Faecalibacterium
prausnitzii SL3/3]
Length = 291
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 91/285 (31%), Positives = 158/285 (55%), Gaps = 8/285 (2%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
+L + +S ET + + I P+P PR FE E L +L SI HG
Sbjct: 13 DSLFEDAAPVFESEHAAVET-------LPLREIEPDPDQPRKTFEQETLSELAASIAEHG 65
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
++QP+ VR G Y I+AGERR+RA++MA L+EVPV+I++V ++ ++E+A+VEN+QR+D
Sbjct: 66 LLQPIAVRPRPMGGYSIVAGERRWRASRMAGLTEVPVVIKDVSDEQAMELALVENLQRED 125
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
L+P+EEA G +L++ TQ +GKSRS +AN LR+L LP +V E+++ I+ G
Sbjct: 126 LDPVEEAAGIRELMTRCDLTQEQAARKLGKSRSALANSLRLLNLPETVLELLKSGFINTG 185
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
HA+ ++ P A+ + + + + K+ E + + ++E
Sbjct: 186 HAKVVLGLPTPELQAEAAQIIADNQLNVRQAEALCKKMAKPAKEPREPAPRGTLPV-EVE 244
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
+ + +G +++ + KG+ + + ++EQL+ +LLG+ E
Sbjct: 245 ESLKQVLGSEVNVAYHGGKGKLTVHFYSDEQLRAFANLLGQYQME 289
>gi|308450305|ref|XP_003088251.1| hypothetical protein CRE_27988 [Caenorhabditis remanei]
gi|308248647|gb|EFO92599.1| hypothetical protein CRE_27988 [Caenorhabditis remanei]
Length = 892
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 81/283 (28%), Positives = 149/283 (52%), Gaps = 5/283 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + + + +++ IVPN PR F+ + LE+L S++ G+ QP++
Sbjct: 366 ASTLAEPEPELQAVPGATLTRLAVEDIVPNHVQPRTEFDEQALEELTHSVREFGVFQPIV 425
Query: 81 VRAIDN-----GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
VRAI+ Y++I GERR RA+K A L +P I+R ++ L A++EN+ R L
Sbjct: 426 VRAIEPAPVEGPKYELIMGERRLRASKRAGLDSIPAIVRTTADEHMLRDALLENLHRAQL 485
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
NPLEEA Y+QL++++G TQ + +G+SR ++N +R+LKLP V+ + ++ GH
Sbjct: 486 NPLEEASAYQQLLADFGITQEQLAERIGRSRPQISNTIRLLKLPEPVQARVAAGVLTAGH 545
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
AR ++S + K ++ + + +++ KRK + ++ L ++
Sbjct: 546 ARAILSLDGDADAMLRLADKIVNEGLSVRAAEAVASEEPKRKAPKPRAGGRQGQLEEIAD 605
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
++ ++ +S+K KGQ I + T + LK I + + + F
Sbjct: 606 RLGDRLDTRVSVKLGAKKGQIIIDFATIQDLKRILAEIDDPGF 648
>gi|317489234|ref|ZP_07947751.1| ParB-like partition protein [Eggerthella sp. 1_3_56FAA]
gi|316911635|gb|EFV33227.1| ParB-like partition protein [Eggerthella sp. 1_3_56FAA]
Length = 314
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 88/274 (32%), Positives = 142/274 (51%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E +S + D + I S+ PNP PR F+ E LE+L SI+ G++QP+
Sbjct: 36 ESIVDGESQVTIKSVVQRRTDEVPIESVSPNPDQPRTNFKREALEELAASIEKDGLLQPI 95
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + Y+IIAGERR++A K+ L VPV I++ D+ +LE+A+VEN+QR DLNP+E
Sbjct: 96 LVRPVGTNEYQIIAGERRWQACKIVGLKTVPVRIKDADDDQALELALVENIQRSDLNPIE 155
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA GY +++ TQ+++ + K RS VAN LR+L+LP ++++ +E+IS GHAR +
Sbjct: 156 EAYGYRRMMERRNLTQSEVAQAMSKGRSTVANALRLLELPEEAQQLLFEEKISAGHARAI 215
Query: 200 VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS 259
+S ++ E KR K + K +
Sbjct: 216 LSIPTKEGRQKLTDKLVAEKLTVREAEAIARLFSGKRNDAPTKKEPLPKTFKTVAKALKD 275
Query: 260 KVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + +K N K + I+++ E L+ + L
Sbjct: 276 VLHTPVKVKSSNGKNKIEIEFQDEEDLERLFEEL 309
>gi|50843776|ref|YP_057003.1| chromosome partitioning protein ParB [Propionibacterium acnes
KPA171202]
gi|289424163|ref|ZP_06425946.1| ParB-like protein [Propionibacterium acnes SK187]
gi|295131869|ref|YP_003582532.1| ParB-like protein [Propionibacterium acnes SK137]
gi|50841378|gb|AAT84045.1| probable chromosome partitioning protein ParB [Propionibacterium
acnes KPA171202]
gi|289154860|gb|EFD03542.1| ParB-like protein [Propionibacterium acnes SK187]
gi|291376405|gb|ADE00260.1| ParB-like protein [Propionibacterium acnes SK137]
gi|332676732|gb|AEE73548.1| putative chromosome-partitioning protein ParB [Propionibacterium
acnes 266]
Length = 306
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 167/309 (54%), Gaps = 17/309 (5%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M+ +S LGRG L + S D + IS+ I P
Sbjct: 1 MAAKHS--GLGRGFGELFQRTDLDDDDEERVDDASTDGDAINERVGGSRLELISVDEISP 58
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N PR F E L +L +SI++ G++QP++V DNG Y+++ GERR+RAA+ A L+ V
Sbjct: 59 NARQPRKMFNEEELTELSESIRAVGVLQPVVVTPADNG-YELVMGERRWRAARKAGLATV 117
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 118 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQI 177
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + EI+ GHAR L++ +P A +V + +SVR TEELV
Sbjct: 178 ANTIRLLKLSADVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELV 237
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
++ + + K ++ L +++S + + ++ RN +G + NE+L
Sbjct: 238 RQTLDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEEL 297
Query: 287 KIICSLLGE 295
+ + + +
Sbjct: 298 ERLIDIFSD 306
>gi|257792841|ref|YP_003183447.1| parB-like partition protein [Eggerthella lenta DSM 2243]
gi|257476738|gb|ACV57058.1| parB-like partition protein [Eggerthella lenta DSM 2243]
Length = 282
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 88/274 (32%), Positives = 142/274 (51%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E +S + D + I S+ PNP PR F+ E LE+L SI+ G++QP+
Sbjct: 4 ESIVDGESQVIIKSVVQRRIDEVPIESVSPNPDQPRTNFKREALEELAASIEKDGLLQPI 63
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + Y+IIAGERR++A K+ L VPV I++ D+ +LE+A+VEN+QR DLNP+E
Sbjct: 64 LVRPVGTNEYQIIAGERRWQACKIVGLKTVPVRIKDADDDQALELALVENIQRSDLNPIE 123
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA GY +++ TQ+++ + K RS VAN LR+L+LP ++++ +E+IS GHAR +
Sbjct: 124 EAYGYRRMMERRNLTQSEVAQAMSKGRSTVANALRLLELPEEAQQLLFEEKISAGHARAI 183
Query: 200 VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS 259
+S ++ E KR K + K +
Sbjct: 184 LSIPTKEGRQKLTDKLVAEKLTVREAEAIARLFSGKRNDAPTKKEPLPKTFKTVAKALKD 243
Query: 260 KVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + +K N K + I+++ E L+ + L
Sbjct: 244 VLHTPVKVKSSNGKNKIEIEFQDEEDLERLFEEL 277
>gi|213966239|ref|ZP_03394423.1| chromosome partitioning protein ParB [Corynebacterium amycolatum
SK46]
gi|213951091|gb|EEB62489.1| chromosome partitioning protein ParB [Corynebacterium amycolatum
SK46]
Length = 425
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 90/300 (30%), Positives = 152/300 (50%), Gaps = 24/300 (8%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
++ D + + + I PNP PR F+ E L +L SI+ G++QP+IV
Sbjct: 127 AEATDVDASAANEFGATYREVDLKLITPNPKQPREVFDEEPLNELAHSIREFGLLQPIIV 186
Query: 82 RAI-------------------DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
R I ++II GERR+RA++ A + +P I+R+ N+ L
Sbjct: 187 RPISEDSRAAALEAARKEDANAPQPEFEIIMGERRWRASQRAGIDTIPAIVRDTPNQDML 246
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
A++EN+ R LNPLEEA Y+QL+ E+G TQ ++ +G+SR + N++R+L+LP V
Sbjct: 247 RDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQAELADRIGRSRPVITNMIRLLQLPVEV 306
Query: 183 REMIRKEEISLGHARTL----VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+ + +S GHAR L LA+ IV++ +SVR TEE V + + +K+
Sbjct: 307 QRRVAVGVLSAGHARALLGVKAGKEAQQRLAERIVAEGLSVRATEEAVTLLNAGERPKKQ 366
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
E + + E L + ++S+ ++ + KG+ I++ E I SL+ ++
Sbjct: 367 HREPTPQPEV-LHNWADRLSNSFDTKVTAQMGKRKGKIVIEFGNLEDFDRIMSLMHLDEE 425
>gi|289449556|ref|YP_003474440.1| ParB-like protein [Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289184103|gb|ADC90528.1| ParB-like protein [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 322
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 95/293 (32%), Positives = 163/293 (55%), Gaps = 10/293 (3%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDC----------ISIHSIVPNPHNPRNYFESEGLE 64
+L+ E + +S KT + ++I+ ++PN + PR +F+ LE
Sbjct: 29 NSLLRETDNQNESSSYKTNDDNNQRKESLFEKNKVYNVNINFVMPNENQPRKFFDKIKLE 88
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SIK++GIIQP++V + YKIIAGERR+RAA++ L EVP++IR + LE
Sbjct: 89 ELANSIKNNGIIQPILVTKVAKDKYKIIAGERRWRAARLLGLKEVPILIRELTESEVLEQ 148
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +EEA +L+ E+ TQ ++ + VGKSRS +AN LR+L LP SV+
Sbjct: 149 ALIENIQRQDLNAIEEAEALTRLMDEHKLTQEEVSARVGKSRSSIANTLRLLSLPQSVQS 208
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
++ ++++S GHAR LV+ + + ++ ++ K+I S
Sbjct: 209 LVIQDDLSAGHARALVAIKNEELQLSLAEEAINKDLSVRDIEKKIKKALTPPKEIDAQSE 268
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
L ++E ++ +G + ++ +NNKG+ I Y + + + I +L N+
Sbjct: 269 AYRLSLQEIEDLLTKSLGTKVQLREKNNKGRIVISYYSADDRERILEILENNN 321
>gi|315654397|ref|ZP_07907305.1| stage 0 DNA-binding protein [Mobiluncus curtisii ATCC 51333]
gi|315491432|gb|EFU81049.1| stage 0 DNA-binding protein [Mobiluncus curtisii ATCC 51333]
Length = 340
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 100/340 (29%), Positives = 161/340 (47%), Gaps = 50/340 (14%)
Query: 1 MSNNYSKRRLGRGLAALIGE---------------------------------------- 20
M+ KR LG GL ALI
Sbjct: 1 MA---KKRALGSGLGALIPSAPVEPRGVDVLVPPKPGTNSTKGNDKVHDLLSPDAMQRRT 57
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
V + S + + I SI N PR F+ + L +L SI+S GI+QP+
Sbjct: 58 VKTAEPSEPSLVPVPGMTVQELPITSITANRAQPREIFDEDALAELANSIRSVGILQPVT 117
Query: 81 VRAIDNGL---YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
VR I++ Y+++ GERR RAAK+A S +P IIR+ + A++EN+QR +LNP
Sbjct: 118 VRQIESDPKPLYELVMGERRLRAAKLAGRSTIPAIIRDTADDEMGVNALLENIQRVNLNP 177
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA Y+Q+I E G TQ + + +SR +AN LR+LKLP++V+ + +S GHAR
Sbjct: 178 LEEAAAYQQMIEELGVTQETLAKRLSRSRPQIANTLRLLKLPAAVQVQVAAGVLSAGHAR 237
Query: 198 TLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK-EKYLTDL 253
L+ LAQ IV++ +SVR TEE+V D + + + + ++
Sbjct: 238 ALLALDDPEAMTQLAQRIVAEGLSVRATEEIVAVGDTTDSQTAEPKKRQVTPLSPDMMEM 297
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++ + ++++ KG+ I++ ++ L I ++
Sbjct: 298 KSQLEDALQTRVNLQVGKTKGKVTIEFADSDDLARIAKII 337
>gi|227535786|ref|ZP_03965835.1| stage 0 DNA-binding protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227244274|gb|EEI94289.1| stage 0 DNA-binding protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 308
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 87/266 (32%), Positives = 150/266 (56%), Gaps = 6/266 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
S + I + I NP PR F+ + L++L +SI+ G+IQP+ VR + + Y++I+
Sbjct: 41 KTSGSINFIKVEEITVNPFQPRTDFDEQALQELSESIQLQGLIQPITVRQVGDNAYQLIS 100
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR RA+K+A ++ +P +R +++ LE+A++EN+QR++LN +E AL ++++I E
Sbjct: 101 GERRLRASKLAGITSIPAYVRTANDQQMLEMALIENIQRENLNAIEVALSFQRMIEECNL 160
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQ 210
Q ++G V K+RS V N LR+LKLP ++ IR ++S+GHAR + L + +
Sbjct: 161 KQEELGDRVSKNRSTVTNYLRLLKLPPVIQAAIRDGQLSMGHARALINVGEVDKQLYIFK 220
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
I+ K +SVR E+LV+E ++K + +E ++SK + + +
Sbjct: 221 EIIEKGLSVRKAEQLVREVQQAAARKKSPSDKKTALTFQFQKIEDDLASKFASRVKLNVK 280
Query: 271 ---NNKGQFCIKYETNEQLKIICSLL 293
KG I +E+ + L I LL
Sbjct: 281 SSTKGKGAIEIPFESEDDLSRILELL 306
>gi|256826451|ref|YP_003150411.1| chromosome segregation DNA-binding protein [Kytococcus sedentarius
DSM 20547]
gi|256689844|gb|ACV07646.1| chromosome segregation DNA-binding protein [Kytococcus sedentarius
DSM 20547]
Length = 367
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 90/281 (32%), Positives = 142/281 (50%), Gaps = 6/281 (2%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ S E I +++ IVPNP PR F+ + L++L SI+ G++QP++V
Sbjct: 88 SAVTASNEPADTGIGARLVELAVDEIVPNPRQPREVFDEDDLQELAHSIRELGVMQPVVV 147
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
R + ++I GERR RA ++A L +P I+R + L A++EN+ R LNPLEEA
Sbjct: 148 RRVGEAH-ELIMGERRLRATRLAGLETIPAILRETGDDEMLREALLENLHRVQLNPLEEA 206
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
Y QL+ ++G T +++ +G+SR + N LR+LKLP SV + +S GHAR L+
Sbjct: 207 AAYGQLLEDFGCTHDELAKRLGRSRPRITNSLRLLKLPPSVARRVAAGVLSAGHARALLG 266
Query: 202 TSD---PLSLAQVIVSKKMSVRDTEELVQEQ--DNKKEKRKKIFEGSREKEKYLTDLEKK 256
D +AQ +V++ MSVR EEL+ R +L
Sbjct: 267 LEDGAAMERMAQRVVAEGMSVRGLEELIALGVGGEGDSTETPRRRPQRRSTPEHEELAAD 326
Query: 257 ISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+S + +S+K KG +++ E L I ++L D
Sbjct: 327 LSDRWDTRVSVKMGRTKGTLTVEFAGQEDLDRILTMLVPED 367
>gi|222823230|ref|YP_002574803.1| chromosome partitioning protein ParB [Campylobacter lari RM2100]
gi|222538451|gb|ACM63552.1| chromosome partitioning protein ParB [Campylobacter lari RM2100]
Length = 283
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 95/291 (32%), Positives = 167/291 (57%), Gaps = 12/291 (4%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRGL++++ ++++ EK+ + + I I I PNP+ PR F+++ LE+
Sbjct: 3 KKSALGRGLSSILADIDEVY---EKELGSNEGRIEEIDIDLISPNPYQPRKNFDTQALEE 59
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK +G+IQP++V D Y +IAGERRFRA K+ ++ ++ NVD+ E+A
Sbjct: 60 LAGSIKEYGLIQPVVVFKKDEFDYILIAGERRFRACKLLGKEQIKAVVLNVDDIKLRELA 119
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR++LNP+E A Y++L+ + TQ + ++ KSRS +AN LR+L L + +
Sbjct: 120 LIENIQRENLNPIELAHSYKELLEIHDITQEKLADLIHKSRSQIANTLRLLNLNEQTQNL 179
Query: 186 IRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
I + +IS GHA+ LV + + I+ +K++VRDTE+L++ N + K
Sbjct: 180 IIEGKISQGHAKVLVGLEKEEEKMIVDTIIGQKLNVRDTEKLIKNFKNTNQLEKNTSSNK 239
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + +L++KI +GL ++ K + I +E +++K +
Sbjct: 240 EYQS--IINLKEKI-ESLGLKVNTKDL----KITINFENEDEVKEFLKTIN 283
>gi|196229771|ref|ZP_03128635.1| parB-like partition protein [Chthoniobacter flavus Ellin428]
gi|196226097|gb|EDY20603.1| parB-like partition protein [Chthoniobacter flavus Ellin428]
Length = 299
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 101/298 (33%), Positives = 163/298 (54%), Gaps = 13/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K LG+GL ALI + + E + ++ + +P PR F E LE
Sbjct: 1 MAKVALGKGLGALI----NTRVASPTPAVESGERVQPMPLNKLFASPLQPRTVFRDEHLE 56
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SIK HGIIQPLI R + +++IAGERR+RAA+ A L+E PVIIR ++ LE+
Sbjct: 57 ELVASIKEHGIIQPLIARQRGDR-FELIAGERRWRAAQKAGLAEAPVIIREASDQDVLEL 115
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+EEA + +L E+G Q DI VGK+R+ VAN +R+L+L V+
Sbjct: 116 ALIENLQREDLNPIEEANAFARLAKEFGLRQEDIAQKVGKNRATVANSMRLLELHEQVQS 175
Query: 185 MIRKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQ-----DNKKEKR 236
+ ++ IS+GHA+ L+S A + I+ ++VR E+LV K +
Sbjct: 176 YLAQDRISVGHAKVLLSLKSREEQALLAEEIIRHSLTVRAAEKLVARHFVETGTPKPTRN 235
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ L+ ++ + ++++ H +G+ I+Y N+ L+ + +LG
Sbjct: 236 GTAAAAKPSLAPAVQHLQNQLQQHLATHVTLHHGEKRGRIEIEYYGNDDLQRLLGVLG 293
>gi|164686456|ref|ZP_02210484.1| hypothetical protein CLOBAR_00021 [Clostridium bartlettii DSM
16795]
gi|164604467|gb|EDQ97932.1| hypothetical protein CLOBAR_00021 [Clostridium bartlettii DSM
16795]
Length = 273
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 94/265 (35%), Positives = 157/265 (59%), Gaps = 1/265 (0%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+K ++ I I + PN PR YF+ + + LC+SIK HG++QP++VR D G
Sbjct: 7 DKISQENQNQVVNIKISDVYPNGDQPRIYFDEDKIIALCESIKKHGVLQPIVVRPDDEGR 66
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y IIAGERR+RA+ MA+ +P II+++ K LEIA+VEN+QR++LN +EEA Y+ LI
Sbjct: 67 YMIIAGERRYRASIMANKESIPAIIKDMPIKEVLEIALVENLQRENLNIIEEAKAYKNLI 126
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
++ TQ ++ +VG+SR ++ N +R+L L V++ I E+IS GH + L+ S+
Sbjct: 127 DKHKSTQEELAELVGRSRPYITNTMRLLNLSDEVKKYIELEKISPGHGKALLRVSNKEKQ 186
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK 268
+ + + + +E + KKI S+EK+ ++ D+E+++ + +G ++I
Sbjct: 187 IG-LAQQIIKENLSVRKTEEIIKGMLEEKKIKNKSKEKDIFIKDIEERLMNTLGTKVNIS 245
Query: 269 HRNNKGQFCIKYETNEQLKIICSLL 293
N KG+ I+Y T++ L I L
Sbjct: 246 TGNKKGKIEIEYYTDDDLNDIIDRL 270
>gi|315657681|ref|ZP_07910563.1| plasmid partition ParA protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315492153|gb|EFU81762.1| plasmid partition ParA protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 340
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 99/340 (29%), Positives = 160/340 (47%), Gaps = 50/340 (14%)
Query: 1 MSNNYSKRRLGRGLAALIGEV--------------------------------------- 21
M+ KR LG GL ALI
Sbjct: 1 MA---KKRALGSGLGALIPSAPVEPRGVDVLVPPKPGTNSTKGNDKVHDLLSPDAMQRRT 57
Query: 22 -NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ S + + I SI N PR F+ + L +L SI+S GI+QP+
Sbjct: 58 AKTAEPSEPSLVPVPGMTVQELPITSITANRAQPREIFDEDALAELANSIRSVGILQPVT 117
Query: 81 VRAIDNGL---YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
VR I++ Y+++ GERR RAAK+A S +P IIR+ + A++EN+QR +LNP
Sbjct: 118 VRQIESDPKPLYELVMGERRLRAAKLAGRSTIPAIIRDTADDEMGVNALLENIQRVNLNP 177
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA Y+Q+I E G TQ + + +SR +AN LR+LKLP++V+ + +S GHAR
Sbjct: 178 LEEAAAYQQMIEELGVTQETLAKRLSRSRPQIANTLRLLKLPAAVQVQVAAGVLSAGHAR 237
Query: 198 TLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK-EKYLTDL 253
L+ LAQ IV++ +SVR TEE+V D + + + + ++
Sbjct: 238 ALLALDDPEAMTQLAQRIVAEGLSVRATEEIVAVGDTTDSQTAEPKKRQVTPLSPDMMEM 297
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++ + ++++ KG+ I++ ++ L I ++
Sbjct: 298 KSQLEDALQTRVNLQVGKTKGKVTIEFADSDDLARIAKII 337
>gi|182414659|ref|YP_001819725.1| parB-like partition protein [Opitutus terrae PB90-1]
gi|177841873|gb|ACB76125.1| parB-like partition protein [Opitutus terrae PB90-1]
Length = 309
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 94/308 (30%), Positives = 159/308 (51%), Gaps = 16/308 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPE---------SQDCISIHSIVPNP 51
MS K RLGRGL LI + P + + +H I P+P
Sbjct: 1 MSAAP-KSRLGRGLGGLIASAAPAAPQPAAASAATARPAAPAPEVPGYQEVGVHLIEPSP 59
Query: 52 HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPV 111
+ R + L +L +SI+S G++QP++VR + +++IAGERR+RA + + +P
Sbjct: 60 YQARREIPPDQLNELAESIRSEGLLQPIVVRKVGEK-FQLIAGERRWRAFQQLKIKTIPA 118
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
+ N S+ + ++EN+QR+ LN +EEA G+ LI ++ TQ VGK+R+ VAN
Sbjct: 119 RVVEASNASAAALGLIENLQREGLNAIEEAHGFASLIRDFDLTQETAADRVGKARATVAN 178
Query: 172 ILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
LR+L L ++ I + +++GHA+ + + LA+ I+ + +SVR TE+LV
Sbjct: 179 SLRLLSLDGEIQGFIARNLLTVGHAKVLLGIADPAQRSLLARRIIEEGLSVRGTEKLVLA 238
Query: 229 QDNKKEKRKKIFEGS-REKEKY-LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
+ K + K+ + +EKK++S +G +++ H KG+ I+Y NE L
Sbjct: 239 RKAAGGHTPKAKNRNLPAKDAEAVAGIEKKLTSHLGARVAVLHTPKKGRIVIEYRGNEDL 298
Query: 287 KIICSLLG 294
+ + LG
Sbjct: 299 QRLLEKLG 306
>gi|49482590|ref|YP_039814.1| DNA-binding protein [Staphylococcus aureus subsp. aureus MRSA252]
gi|257424504|ref|ZP_05600933.1| chromosome partitioning ParB family protein [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257427173|ref|ZP_05603575.1| ParB family chromosome partioning protein [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257429809|ref|ZP_05606196.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432513|ref|ZP_05608876.1| ParB family partitioning protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257435415|ref|ZP_05611466.1| chromosome partitioning ParB family protein [Staphylococcus aureus
subsp. aureus M876]
gi|282902945|ref|ZP_06310838.1| spoOJ protein [Staphylococcus aureus subsp. aureus C160]
gi|282907343|ref|ZP_06315191.1| spoOJ protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282907686|ref|ZP_06315528.1| spoOJ protein [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282913218|ref|ZP_06321010.1| spoOJ protein [Staphylococcus aureus subsp. aureus M899]
gi|282921657|ref|ZP_06329375.1| chromosome partitioning protein [Staphylococcus aureus subsp.
aureus C427]
gi|282922845|ref|ZP_06330535.1| spoOJ protein [Staphylococcus aureus subsp. aureus C101]
gi|283959798|ref|ZP_06377239.1| spoOJ protein [Staphylococcus aureus subsp. aureus A017934/97]
gi|293498267|ref|ZP_06666121.1| DNA-binding protein [Staphylococcus aureus subsp. aureus 58-424]
gi|293509208|ref|ZP_06667926.1| spoOJ protein [Staphylococcus aureus subsp. aureus M809]
gi|293550472|ref|ZP_06673144.1| spoOJ protein [Staphylococcus aureus subsp. aureus M1015]
gi|295426894|ref|ZP_06819533.1| DNA-binding protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297588894|ref|ZP_06947535.1| chromosome partitioning protein SpoOJ [Staphylococcus aureus subsp.
aureus MN8]
gi|49240719|emb|CAG39380.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257273522|gb|EEV05624.1| chromosome partitioning ParB family protein [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257276804|gb|EEV08255.1| ParB family chromosome partioning protein [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257280290|gb|EEV10877.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257283392|gb|EEV13524.1| ParB family partitioning protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257286011|gb|EEV16127.1| chromosome partitioning ParB family protein [Staphylococcus aureus
subsp. aureus M876]
gi|282315066|gb|EFB45452.1| spoOJ protein [Staphylococcus aureus subsp. aureus C101]
gi|282316072|gb|EFB46456.1| chromosome partitioning protein [Staphylococcus aureus subsp.
aureus C427]
gi|282323318|gb|EFB53637.1| spoOJ protein [Staphylococcus aureus subsp. aureus M899]
gi|282328591|gb|EFB58862.1| spoOJ protein [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330242|gb|EFB59763.1| spoOJ protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282597404|gb|EFC02363.1| spoOJ protein [Staphylococcus aureus subsp. aureus C160]
gi|283789390|gb|EFC28217.1| spoOJ protein [Staphylococcus aureus subsp. aureus A017934/97]
gi|290919519|gb|EFD96595.1| spoOJ protein [Staphylococcus aureus subsp. aureus M1015]
gi|291097198|gb|EFE27456.1| DNA-binding protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291467960|gb|EFF10468.1| spoOJ protein [Staphylococcus aureus subsp. aureus M809]
gi|295129346|gb|EFG58973.1| DNA-binding protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297577405|gb|EFH96118.1| chromosome partitioning protein SpoOJ [Staphylococcus aureus subsp.
aureus MN8]
Length = 281
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 155/277 (55%), Gaps = 5/277 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
S ++ T+T E I I I PNP+ PR F+ L DL SIK +GI+QP++
Sbjct: 2 SELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIV 61
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
+R G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EE
Sbjct: 62 LRKTVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEE 120
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART-- 198
A Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT
Sbjct: 121 AESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLL 180
Query: 199 -LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ L LA+ +V +K SVR E V E N + + + K K++ E+++
Sbjct: 181 AIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKN-VSSKSETDKVDITKPKFIKQQERQL 239
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ G + I + + G+ ++E+ + I L
Sbjct: 240 REQYGAKVDISIKKSVGKISFEFESQDDFVRIIKQLN 276
>gi|47531065|ref|YP_022414.1| stage 0 sporulation protein J [Bacillus anthracis str. 'Ames
Ancestor']
gi|47506213|gb|AAT34889.1| stage 0 sporulation protein J [Bacillus anthracis str. 'Ames
Ancestor']
Length = 256
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 97/258 (37%), Positives = 157/258 (60%), Gaps = 7/258 (2%)
Query: 44 IHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKM 103
I + PNP+ PR +F E +++L SIK HGI+QPLI R Y+I+AGERR+RAAK
Sbjct: 2 ITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARK-SIKGYEIVAGERRYRAAKE 60
Query: 104 ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVG 163
A L +VP ++R ++ + +E A++EN+QR+DLNP+EEA+ Y+ L++E TQ + +G
Sbjct: 61 AGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKCLG 120
Query: 164 KSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS---LAQVIVSKKMSVR 220
KSR ++AN R+L LPS V++MI ++S+ H RTL++ D L + I + ++VR
Sbjct: 121 KSRPYIANYTRLLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVR 180
Query: 221 DTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIK 279
E++VQE + + K + +E+ + + E + K G ++ IK + KG+ I+
Sbjct: 181 QLEKIVQEINQSVSRETKQVK--KERNIFFIERETFLREKFGTDVKIKETKKEKGKIEIE 238
Query: 280 YETNEQLKIICSLLGEND 297
+ E L I LL + +
Sbjct: 239 FFNKEDLNRILELLAQKN 256
>gi|327334542|gb|EGE76253.1| ParB family protein [Propionibacterium acnes HL097PA1]
Length = 308
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 96/309 (31%), Positives = 164/309 (53%), Gaps = 15/309 (4%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M+ LGRG + S D + IS+ I P
Sbjct: 1 MTVAAKHSGLGRGFGEFFQRTDLDDDDEERVDDASTDGDAINERVGGSRLELISVDEISP 60
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N PR F E L +L +SI++ G++QP++V DNG Y+++ GERR+RAA+ A L+ V
Sbjct: 61 NARQPRKMFNEEELTELSESIRAVGVLQPVVVTPADNG-YELVMGERRWRAARKAGLATV 119
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 120 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQI 179
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + EI+ GHAR L++ +P A +V + +SVR TEELV
Sbjct: 180 ANTIRLLKLSADVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELV 239
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
++ + + K ++ L +++S + + ++ RN +G + NE+L
Sbjct: 240 RQTLDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEEL 299
Query: 287 KIICSLLGE 295
+ + + +
Sbjct: 300 ERLIDIFSD 308
>gi|283469667|emb|CAQ48878.1| stage 0 sporulation protein J [Staphylococcus aureus subsp. aureus
ST398]
Length = 278
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 90/274 (32%), Positives = 155/274 (56%), Gaps = 5/274 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
S ++ T+T E I I I PNP+ PR F+ L DL SIK +GI+QP+++R
Sbjct: 2 SKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRK 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EEA
Sbjct: 62 TVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAES 120
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LV 200
Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT +
Sbjct: 121 YQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLLAIK 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
L LA+ +V +K SVR E V E N + + + K K++ E+++ +
Sbjct: 181 DEQQMLRLAKRVVKEKWSVRYLENHVNELKN-VSSKSETDKVDITKPKFIKQQERQLREQ 239
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
G + I + + G+ ++E+ + I L
Sbjct: 240 YGAKVDISIKKSVGKISFEFESQDDFVRIIEQLN 273
>gi|281414974|ref|ZP_06246716.1| ParB-like partition protein [Micrococcus luteus NCTC 2665]
Length = 280
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 89/260 (34%), Positives = 138/260 (53%), Gaps = 5/260 (1%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI-IAGERR 97
I + I PNP PR F+ + + +L SI+ GI+QP++VR +D I GERR
Sbjct: 8 LREIPVGDIHPNPRQPREVFDEDHMAELVTSIREVGILQPIVVREVDGPTPYELIMGERR 67
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
+RA + A L +P I+R ++ L A++EN+ R LNPLEEA Y+QL+ ++ TQ +
Sbjct: 68 WRATQKAGLDTIPAIVRQTPDQDLLRDALLENLHRSQLNPLEEAAAYQQLMEDFACTQEE 127
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVS 214
+ +G+SR ++N LR+LKLP V+ + +S GHAR L SD LAQ I S
Sbjct: 128 LSQRIGRSRPQISNTLRLLKLPPLVQRRVAAGTLSAGHARALLGLTDPSDMERLAQRIQS 187
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSRE-KEKYLTDLEKKISSKVGLNISIKHRNNK 273
+ +SVR TEE V + + + + + + L ++S++ + I K
Sbjct: 188 EGLSVRSTEEAVAQLQGGLRPGRTPRRSTDDARHERLDHYATALTSRLDTAVKITLGARK 247
Query: 274 GQFCIKYETNEQLKIICSLL 293
G+ I + T E L I L+
Sbjct: 248 GRIAIDFTTVEDLNRIMDLI 267
>gi|195979049|ref|YP_002124293.1| chromosome (plasmid) partitioning protein ParB [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195975754|gb|ACG63280.1| chromosome (plasmid) partitioning protein ParB [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 257
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 93/259 (35%), Positives = 152/259 (58%), Gaps = 5/259 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E I I IV NP+ PR F + LE+L SI+++G+IQP+IVR D Y+++AGER
Sbjct: 3 EILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RF+AAK+A L ++P I++ + S++ AIVEN+QR +LN +EEA Y+ LI + T
Sbjct: 63 RFKAAKLAGLQKIPAIVKEISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHE 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
DI + +GKSR +++N +R+L+LP +++ I IS GHAR L+S S P
Sbjct: 123 DIATYMGKSRPYISNTIRLLQLPDVIKQAIEDSTISAGHARALLSLSTPKEQELYF---- 178
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQ 275
++ D V++ + + + + S+ K ++ LEK++S +GL +++ + N GQ
Sbjct: 179 HNILDQGLSVRQIEQLVKAKHHPQKRSKHKTIFVKSLEKELSKSLGLPVALSLKKNDSGQ 238
Query: 276 FCIKYETNEQLKIICSLLG 294
+ + E+L I + L
Sbjct: 239 LQLSFSNQEELNRIINKLK 257
>gi|291532535|emb|CBL05648.1| chromosome segregation DNA-binding protein [Megamonas hypermegale
ART12/1]
Length = 277
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 94/257 (36%), Positives = 160/257 (62%), Gaps = 4/257 (1%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
++I I+PNP PR F+ E L L +SIK +GII+PLIVR DN +++IAGERR RAA
Sbjct: 4 LNIDEILPNPFQPRKEFDMEQLAQLAKSIKEYGIIEPLIVRINDNDEFELIAGERRLRAA 63
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
KMA L +VP+I+++ D+ +IA++EN+QR +LN +EEA Y+ L+ ++ Q ++
Sbjct: 64 KMAGLDKVPIILKDYDDDKVAQIALIENLQRSNLNVIEEANAYQLLLHKFNLKQEEVAQK 123
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMS 218
VGKSRSH+AN +R+L L V+ +++ ++++G A+ L++ D A +I+ +++S
Sbjct: 124 VGKSRSHIANFVRLLNLAKEVQCLLQDNKLNMGQAKPLLAIEDEKLQVKLANLIIERELS 183
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCI 278
R E LV++ ++I + K YL D+++++ +G N++IK K + I
Sbjct: 184 ARKAEALVKKVLAGDNVIEQIEQVKEAKM-YLNDVQERLKQILGTNVNIKQGKKKSRIEI 242
Query: 279 KYETNEQLKIICSLLGE 295
++ ++ L + LL E
Sbjct: 243 EFYNDDDLARLVELLME 259
>gi|42525225|ref|NP_970605.1| chromosome partitioning protein [Bdellovibrio bacteriovorus HD100]
gi|39577436|emb|CAE81259.1| chromosome partitioning protein [Bdellovibrio bacteriovorus HD100]
Length = 337
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 101/266 (37%), Positives = 167/266 (62%), Gaps = 4/266 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
+ I + P + PR FE E L++L QSIK +GI+QP++ R +G +I+AG
Sbjct: 70 PESKIWKVGIDKLSPGQYQPRRTFEKEPLQELAQSIKENGILQPIVARRTASGKLEIVAG 129
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR+RA+++A L EVPVI++N D+K +LE+AIVEN+QR+DLNP+EEA GY +LISE+ +
Sbjct: 130 ERRWRASQLAGLHEVPVILKNYDDKQALELAIVENIQREDLNPIEEAEGYSRLISEFKLS 189
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQV 211
Q + VG+ R+ VAN +R+L LP SV+EMI E+S+GHA+ +L + A+
Sbjct: 190 QQQVAEKVGRDRATVANAVRLLSLPDSVKEMISGNELSVGHAKVLLSLQDPKKQIEFAKK 249
Query: 212 IVSKKMSVRDTEELVQE-QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+V++K++VR E++VQ +E + S ++ ++ L ++ +G ++I +
Sbjct: 250 VVNEKIAVRKLEKMVQAVVKGHEEVEEAPTFDSNVTQRLISGLSDELQKMLGTKVNIDYA 309
Query: 271 NNKGQFCIKYETNEQLKIICSLLGEN 296
N+KG+ I + ++++L + L E
Sbjct: 310 NSKGKITIHFYSDDELTNMVDRLKEG 335
>gi|315194819|gb|EFU25208.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
CGS00]
Length = 278
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 90/274 (32%), Positives = 155/274 (56%), Gaps = 5/274 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
S ++ T+T E I I I PNP+ PR F+ L DL SIK +GI+QP+++R
Sbjct: 2 SKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRK 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EEA
Sbjct: 62 TVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAES 120
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LV 200
Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT +
Sbjct: 121 YQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLLAIK 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
L LA+ +V +K SVR E V E N + + + K K++ E+++ +
Sbjct: 181 DEQQMLRLAKRVVKEKWSVRYLENHVNELKN-VSSKSETDKVDITKPKFIKQQERQLREQ 239
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
G + I + + G+ ++E+ + I L
Sbjct: 240 YGAKVDISIKKSVGKISFEFESQDDFVRIIKQLN 273
>gi|68537193|ref|YP_251898.1| chromosome partitioning protein ParB [Corynebacterium jeikeium
K411]
gi|68264792|emb|CAI38280.1| chromosome partitioning protein ParB [Corynebacterium jeikeium
K411]
Length = 508
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 13/291 (4%)
Query: 13 GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
G+++L + S E E + + + +I N PR F+ E L++L SIK
Sbjct: 218 GVSSL----EPTNVSRETPDEDFGATYQELPLSTIRTNAKQPREVFDEEALKELVHSIKE 273
Query: 73 HGIIQPLIVR--AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
G++QP++VR ++ Y++I GERR RAAK A +P I+R + L A++EN+
Sbjct: 274 FGLMQPIVVRRAPNEDSTYELIMGERRLRAAKRAGFDVIPAIVRETADDEMLRDALLENI 333
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
R LNPLEEA Y+QL+ E+G TQ + +G+SR + N++R+L+LP SV+ +
Sbjct: 334 HRVQLNPLEEAAAYQQLMEEFGVTQEQLAKKIGRSRPLITNMIRLLQLPVSVQRRVGAGV 393
Query: 191 ISLGHARTLVSTSDPLSLAQVIVSKK-------MSVRDTEELVQEQDNKKEKRKKIFEGS 243
+S GHAR L+ + + ++ + + L+ D K +
Sbjct: 394 LSAGHARALLGLKSGPEEQERLATRVVSEGLSVRATEEAVTLLNRGDGATAVNKSSGRQA 453
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
++ + ++ S + + ++ KG+ +++ E I LL
Sbjct: 454 QQLPEEVSSWVDNASDALDTKVRVQMGKKKGKIVVEFGGPEDFDRIIELLK 504
>gi|282882253|ref|ZP_06290890.1| stage 0 sporulation protein J [Peptoniphilus lacrimalis 315-B]
gi|281297910|gb|EFA90369.1| stage 0 sporulation protein J [Peptoniphilus lacrimalis 315-B]
Length = 284
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 159/296 (53%), Gaps = 15/296 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
KR LGRG+ + E + I I+ I N PR F+ + LE
Sbjct: 2 TKKRSLGRGIGNFLSSEENIAQIINSDKEK---NFLYIDINLIERNSDQPRKVFDKKSLE 58
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SIK++GIIQPL+++ + +++GERR RAAK+A L +VP II++VD + S +I
Sbjct: 59 ELAESIKNYGIIQPLVLKENGDSYI-VVSGERRLRAAKIAGLEKVPAIIKDVDEEISDKI 117
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+++EN+QR+DLNP+EEA + L+ EY Q D+ +GKSR +V N +R+L L S V +
Sbjct: 118 SLIENIQREDLNPIEEAKAFRYLLDEYNLKQEDLAKEMGKSRQYVGNTIRLLNLDSRVID 177
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+I E+S H + L++ D ++ ++V+ + + K +
Sbjct: 178 LILNGELSQSHGKALLAIKDKEKQY----------KEALKIVKNSISVSKTEKNTSKNRY 227
Query: 245 EK-EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
EK + + D++ K+SS + ++ K R + I+Y + E L+ IC L+ + E
Sbjct: 228 EKLDIFTRDIKDKLSSHLSTKVNFKGRGKHKKLEIEYYSEEDLERICDLILGGNLE 283
>gi|226225433|ref|YP_002759539.1| chromosome partitioning protein ParB [Gemmatimonas aurantiaca T-27]
gi|226088624|dbj|BAH37069.1| chromosome partitioning protein ParB [Gemmatimonas aurantiaca T-27]
Length = 338
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 108/328 (32%), Positives = 170/328 (51%), Gaps = 41/328 (12%)
Query: 8 RRLGRGLAALIG-----------------------------EVNQSIDSPEKKTETIPES 38
RRLGRGL AL+ + E + +
Sbjct: 7 RRLGRGLDALLARRDPKPAAADAAATARAADAPDNAGGSAVASGTAGGHAEPEAVGEAGT 66
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI-IAGERR 97
+S+ I NP PR F E L DL S++ +G++QP+ VR NG IAGERR
Sbjct: 67 LRQLSLSQIRANPFQPRQEFRPEELADLEGSLRVNGLLQPITVRPAPNGQGFELIAGERR 126
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
FRAA +E+P ++RNVD+K+ L +A++EN+QR DL+P+EEA GY++LI ++G T +
Sbjct: 127 FRAATRLGWTEIPALVRNVDDKTLLTLAMIENLQRADLDPIEEADGYQRLIDDFGLTNQE 186
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVS 214
+ IV K RS VAN LR+ +LP+SVR M+++++++ GHAR L S + LA+ +V+
Sbjct: 187 VADIVAKDRSTVANALRLRQLPASVRRMLQEKQLTAGHARALLPLASERAIVDLARDVVA 246
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREK-------EKYLTDLEKKISSKVGLNISI 267
++SVR+ E VQ + K + +E+K+ K+ +S+
Sbjct: 247 NQLSVREVERRVQAGRPAPPAAGRKPAADAGKTVPAGASAAVVRQIEEKLRRKLQTTVSL 306
Query: 268 KHR-NNKGQFCIKYETNEQLKIICSLLG 294
+KG+ I + +N+ L+ + LLG
Sbjct: 307 NLTAKDKGEVRIAFFSNDDLERVLGLLG 334
>gi|303228590|ref|ZP_07315417.1| ParB-like protein [Veillonella atypica ACS-134-V-Col7a]
gi|302516769|gb|EFL58684.1| ParB-like protein [Veillonella atypica ACS-134-V-Col7a]
Length = 303
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 92/301 (30%), Positives = 165/301 (54%), Gaps = 14/301 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K R + LAA++GE + PE++ + I ++PN PR F+
Sbjct: 1 MAMKQKKER--KTLAAMMGEQSIETALPERE-------VHELPIGDVIPNEDQPRKNFDE 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L L +SIK+ GI QP++VR + Y+I+AGERR+RAA M L VPV+++N + +
Sbjct: 52 QSLATLAESIKNLGIFQPIVVRKQKDK-YQIVAGERRYRAALMVGLETVPVVVKNYNTEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A+VEN+QR+ L+P+EEAL Y+ L++ Y TQ I + +G+SRS++AN++R+LKL +
Sbjct: 111 MTEVALVENLQREGLDPIEEALAYQGLMNTYKQTQEMISARLGRSRSYIANMMRLLKLAA 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
SV++ + + ++++G AR L++ + K + Q K+ K
Sbjct: 171 SVQKDLIEGDLTVGQARPLLALRSAAQQVEAAERIKEGELSARQAEQLVKAMMSKKSKSK 230
Query: 241 EGSREKE-KYLTDLEKKISSKVGLNISIKHRNNK---GQFCIKYETNEQLKIICSLLGEN 296
+ + + + L ++ +G +SIK R K G+ I + + +L+ + + +
Sbjct: 231 DTTEPHDTAEVRALVDRLKLSLGSPVSIKFRAGKKVQGKIEIAFSSETELERLIAYMDAQ 290
Query: 297 D 297
+
Sbjct: 291 E 291
>gi|150009156|ref|YP_001303899.1| putative chromosome partitioning protein ParB [Parabacteroides
distasonis ATCC 8503]
gi|256841711|ref|ZP_05547217.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262384044|ref|ZP_06077180.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|149937580|gb|ABR44277.1| putative chromosome partitioning protein ParB [Parabacteroides
distasonis ATCC 8503]
gi|256736605|gb|EEU49933.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262294942|gb|EEY82874.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 295
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 155/302 (51%), Gaps = 16/302 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI + +E I PNP PR+ FE
Sbjct: 1 MA-ALKRSALGRGLDALITMDDLKTGGSSSISEIELS--------KIQPNPEQPRSVFEE 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S G+IQP+ ++ I Y II+GERR+RA+ A L +P I+ +++
Sbjct: 52 ETLEELATSIRSLGVIQPITLKEIGPEQYMIISGERRYRASLKAGLERIPAYIKTAADEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y++LI YG TQ + VGK R+ +AN LR+LKLP+
Sbjct: 112 VVEMALIENIQREDLNSIEIALAYQKLIDNYGLTQEGLSERVGKKRATIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS------KKMSVRDTEELVQEQDNKKE 234
++ ++ ++I +GHAR L+ DP + +V + + E +
Sbjct: 172 EIQVGLKDKKIDMGHARALIPVDDPEVQLALYEQILAQGLSVRNVEEMVRNIAEGIQPEL 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
KK + + L+ +S + + + KG+ I + T E+L+ + LL
Sbjct: 232 PEKKKSDRKPILPEEFKLLKDHLSRYFNTKVQLTCNEKGKGKITIPFATEEELEQLIGLL 291
Query: 294 GE 295
+
Sbjct: 292 DK 293
>gi|300871870|ref|YP_003786743.1| stage 0 sporulation protein J [Brachyspira pilosicoli 95/1000]
gi|300689571|gb|ADK32242.1| stage 0 sporulation protein J [Brachyspira pilosicoli 95/1000]
Length = 315
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 97/302 (32%), Positives = 167/302 (55%), Gaps = 14/302 (4%)
Query: 5 YSKRRLG-RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
K LG +G+ ALI ++ I ++ E I I I NP PR F E +
Sbjct: 2 TRKGGLGGQGMNALIKSTDKEIKRAVEEAEK--NGILEIDISLIDVNPDQPRKVFNEEEI 59
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPV-IIRNVDNKSSL 122
+ L +SIK +G+I P+ +R D Y+II+GERRFRA K + +VP +++N+ + L
Sbjct: 60 KGLAESIKENGLINPVTLREKDGK-YQIISGERRFRAFKYLNKDKVPALVLKNIPDSKML 118
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+ +VEN+QR DLN +E A Y++LI + Q ++ + VGKSRS ++N +RIL+L ++
Sbjct: 119 ELTLVENIQRADLNAIEIARSYKKLIYDLNIKQEELANRVGKSRSTISNSMRILELNENI 178
Query: 183 REMIRKEEISLGHARTLVSTSDPLS----LAQVIVSKKMSVRDTEELVQEQ----DNKKE 234
+ +I + +++ GHART++S SD A+ I+ K SVR+ E++V+E+ + +
Sbjct: 179 QNLILENKLTEGHARTILSFSDNDEERDLFAKEIIEKGYSVRECEKIVKEKKEIVKDNND 238
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQLKIICSLL 293
+ K + +K+ + LE + +++ + K G+ I+Y + + L I +L
Sbjct: 239 TQDKNIKKENKKDPNIKKLENDLEKIFSTKVNVIDKEGKEGKIIIEYYSADDLSRIMDIL 298
Query: 294 GE 295
Sbjct: 299 DN 300
>gi|228476812|ref|ZP_04061460.1| stage 0 sporulation protein J [Streptococcus salivarius SK126]
gi|228251549|gb|EEK10686.1| stage 0 sporulation protein J [Streptococcus salivarius SK126]
Length = 255
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 87/259 (33%), Positives = 140/259 (54%), Gaps = 7/259 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E + I I PNP PR F E L +L QSI +G+IQP+IVR D Y++IAGE
Sbjct: 2 QEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA K ++E+P +++ V ++ S + AI+EN+QR +LNP+EEA Y LI+E Y+
Sbjct: 62 RRLRACKRLGMTEIPAVVKKVTDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSH 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+ +GKSR +++N LR+L+LP ++ I ++S GHAR L++ D +
Sbjct: 122 EQLAKAMGKSRPYISNALRLLQLPQEIQTSIENGKLSQGHARALLAVEDTKKQLTIYHQV 181
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKG 274
L + + +K+ ++ D EK++ +GL ++++ H+N+ G
Sbjct: 182 LTEKWSVRTLEKRLQEL------PKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSG 235
Query: 275 QFCIKYETNEQLKIICSLL 293
I + T E I + L
Sbjct: 236 TIQIHFSTEEDFNRIINKL 254
>gi|317126733|ref|YP_004100845.1| chromosome segregation DNA-binding protein [Intrasporangium calvum
DSM 43043]
gi|315590821|gb|ADU50118.1| chromosome segregation DNA-binding protein [Intrasporangium calvum
DSM 43043]
Length = 364
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 90/287 (31%), Positives = 147/287 (51%), Gaps = 12/287 (4%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G I I I PNP PR+ F+ + + +L SI+ G++QP
Sbjct: 74 GAPGDQTTETGHLAPVPGAEFAEIGIDLIRPNPKQPRSVFDEDDMAELEHSIREIGVLQP 133
Query: 79 LIVRAI--------DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
++VR I D ++II GERR+RA + A L VP II+ + + L A++EN+
Sbjct: 134 IVVRRIPADQLSDADGKQFEIIMGERRWRATQGAGLETVPAIIKETQDDALLRDALLENL 193
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
R LNPLEEA Y+QL+ ++G + ++ +G+SR ++N LR+LKLP V+ +
Sbjct: 194 HRSQLNPLEEAAAYQQLLDDFGCSHEELAQRIGRSRPQISNTLRLLKLPPLVQRRLAAGI 253
Query: 191 ISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GHAR L+ +D +AQ IV++ +SVR EELV D + + + +
Sbjct: 254 LSAGHARALLGLADAAAMERMAQRIVAEGLSVRTVEELVALGDGDVAPKPR-RPRAGTRH 312
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
L D ++ + ++I KG+ +++ + E LK I ++G
Sbjct: 313 PQLDDFTTGLADHLETRVAISLGQRKGKITVEFASMEDLKRIIGIMG 359
>gi|314935178|ref|ZP_07842531.1| spoOJ protein [Staphylococcus hominis subsp. hominis C80]
gi|313656513|gb|EFS20252.1| spoOJ protein [Staphylococcus hominis subsp. hominis C80]
Length = 274
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 96/272 (35%), Positives = 162/272 (59%), Gaps = 5/272 (1%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
++ E I I SI NP+ PR F+ E L+DL +SI +HGI+QP+++R N
Sbjct: 5 EDQRIQLNNDEHVQYIKISSIKVNPYQPRKTFDEEKLQDLAESITTHGILQPIVLRKTIN 64
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G Y ++ GERRFRA+K+A L EVP I++++ + +E+AI+EN+QR+DLN +EEA Y++
Sbjct: 65 GYYIVV-GERRFRASKLAGLEEVPAIVKSLSDSDMMELAIIENLQREDLNAIEEAESYQR 123
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
L+++ G TQ + +GKSR ++AN+LR+L LPS + +++R+ +S H RTL++ D
Sbjct: 124 LMNDLGLTQQKVAERLGKSRPYIANMLRLLNLPSDIAKLVRENRMSGAHGRTLLALKDVN 183
Query: 207 SLAQ---VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
++ + + SVR E++V E + + KK + K K++ E+ + K G
Sbjct: 184 TMKCIGKQAIKEGWSVRYLEKVVSEIQDG-GQYKKEKLNTPSKPKFIQKQERALKEKFGT 242
Query: 264 NISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+I I N G+ ++++ + + I L E
Sbjct: 243 HIDISVSKNVGKIVFEFKSEAEFRRIIDKLNE 274
>gi|300814776|ref|ZP_07095024.1| ParB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511163|gb|EFK38415.1| ParB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 284
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 93/296 (31%), Positives = 160/296 (54%), Gaps = 15/296 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
KR LGRG+ + + + + I I+ I N PR F+ + L+
Sbjct: 2 TKKRSLGRGIGNFLSS---EENIAQIINSDKERNFLYIDINLIERNSDQPRKVFDKKSLD 58
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SIK++GIIQPL+V+ + +++GERR RAAK+A L +VP II++VD + S +I
Sbjct: 59 ELAESIKNYGIIQPLLVKENGDSYI-VVSGERRLRAAKIAGLEKVPAIIKDVDEEISDKI 117
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+++EN+QR+DLNP+EEA + L+ EY Q D+ +GKSR +V N +R+L L S V +
Sbjct: 118 SLIENIQREDLNPIEEAKAFRYLLDEYNLKQEDLAKEIGKSRQYVGNTIRLLNLDSRVID 177
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+I E+S H + L++ D ++ ++V+ + + K +
Sbjct: 178 LILNGELSQSHGKALLAIKDKEKQY----------KEALKIVKNSISVSKTEKNTSKNRY 227
Query: 245 EK-EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
EK + + D++ ++SS + ++ K R + I+Y + E L+ IC L+ + E
Sbjct: 228 EKLDIFTRDIKDRLSSHLSTKVNFKGRGKHKRLEIEYYSEEDLERICDLILGGNLE 283
>gi|270158243|ref|ZP_06186900.1| chromosome partitioning protein ParB [Legionella longbeachae
D-4968]
gi|289163501|ref|YP_003453639.1| chromosome partitioning protein parB [Legionella longbeachae
NSW150]
gi|269990268|gb|EEZ96522.1| chromosome partitioning protein ParB [Legionella longbeachae
D-4968]
gi|288856674|emb|CBJ10485.1| putative chromosome partitioning protein parB [Legionella
longbeachae NSW150]
Length = 294
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 98/295 (33%), Positives = 171/295 (57%), Gaps = 8/295 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGR L+AL+ + + S + + E + +++ + P + PR E L+
Sbjct: 3 VKRSSLGRNLSALLSQSTNVLLSEKPQAERL-----MLAVDCLQPGKYQPRGEMEETPLQ 57
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK G++QPL+VR + +G Y+IIAGERR+RA++MA L+E+PVI++ VD+++++ +
Sbjct: 58 ELAQSIKKQGLLQPLLVRELSDGRYEIIAGERRWRASQMAGLTEIPVILKQVDDETAMAM 117
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLN +++A ++LI+E+ T + ++ KSR+ V+N +R+L L + V++
Sbjct: 118 ALVENLQREDLNAMDQARAMQRLINEFSLTHQQVAELLCKSRTAVSNYIRLLALSNPVKK 177
Query: 185 MIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ +I +GHAR ++ +AQ+IV+K +SVR+TE+LV+ K
Sbjct: 178 LLEHGDIDMGHARALLILEEEQQNQVAQLIVAKNLSVRETEKLVERIKTGKNDIDSNQAK 237
Query: 243 SREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
D K IS + I +K + KG I Y+ L+ I L +
Sbjct: 238 DINPSLLYHDQLKNISRHLQAAIKLKPGKAGKGSLVIHYDNQHSLQTIIEQLTKG 292
>gi|301310945|ref|ZP_07216874.1| spoOJ protein [Bacteroides sp. 20_3]
gi|300831008|gb|EFK61649.1| spoOJ protein [Bacteroides sp. 20_3]
Length = 295
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 155/302 (51%), Gaps = 16/302 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI + +E I PNP PR+ FE
Sbjct: 1 MA-ALKRSALGRGLDALITMDDLKTGGSSSISEIELS--------KIQPNPEQPRSVFEE 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S G+IQP+ ++ I Y II+GERR+RA+ A L +P I+ +++
Sbjct: 52 ETLEELATSIRSLGVIQPITLKEIGPEQYMIISGERRYRASLKAGLERIPAYIKTAADEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y++LI YG TQ + VGK R+ +AN LR+LKLP+
Sbjct: 112 VVEMALIENIQREDLNSIEIALAYQKLIDNYGLTQEGLSERVGKKRATIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS------KKMSVRDTEELVQEQDNKKE 234
++ ++ ++I +GHAR L+ DP + +V + + E +
Sbjct: 172 EIQVGLKDKKIDMGHARALIPVDDPEIQLALYEQILAQGLSVRNVEEMVRNIAEGIQPEL 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
KK + + L+ +S + + + KG+ I + T E+L+ + LL
Sbjct: 232 PEKKKSDRKPILPEEFKLLKDHLSRYFNTKVQLTCNEKGKGKITIPFATEEELEQLIGLL 291
Query: 294 GE 295
+
Sbjct: 292 DK 293
>gi|224475509|ref|YP_002633115.1| putative DNA-binding protein [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420116|emb|CAL26930.1| putative DNA-binding protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 278
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 86/265 (32%), Positives = 148/265 (55%), Gaps = 5/265 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ IS+ I PNP+ PR +FE LEDL SI HG++QP+I+R Y I+ GE
Sbjct: 16 QAQVEEISLEDIRPNPYQPRKHFEETKLEDLAASISEHGVLQPIILRKT-VRGYHIVVGE 74
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RRFRA++ A + +P I++ + +E+AI+EN+QR+DLN +EEA Y +L+ + TQ
Sbjct: 75 RRFRASQKAGKTHIPAIVKEMTEADMMELAIIENLQREDLNAVEEAESYRKLMDDLKLTQ 134
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVI 212
++ + +GKSR ++AN+LR+L LP+ + + I+ ++S H R L A+
Sbjct: 135 KEVATRLGKSRPYIANMLRLLNLPTDITQYIKDGKLSGAHGRTLLMLKDEKIMKRTAKQA 194
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
+ + SVR E V E + + ++K + +K + + E+++ + G N++I + N
Sbjct: 195 IHEAWSVRYLENYVSELTSDQN-KEKQEKQQTKKPRLIQREERRLKERYGTNVAITTKRN 253
Query: 273 KGQFCIKYETNEQLKIICSLLGEND 297
KGQ ++ + E+ + L
Sbjct: 254 KGQVTFEFTSEEEFMRLIEALNSES 278
>gi|288906446|ref|YP_003431668.1| Chromosome partitioning protein, ParB family [Streptococcus
gallolyticus UCN34]
gi|306832483|ref|ZP_07465635.1| ParB family partitioning protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325979509|ref|YP_004289225.1| putative chromosome-partitioning protein parB [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|288733172|emb|CBI14753.1| Chromosome partitioning protein, ParB family [Streptococcus
gallolyticus UCN34]
gi|304425383|gb|EFM28503.1| ParB family partitioning protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325179437|emb|CBZ49481.1| putative chromosome-partitioning protein parB [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 258
Score = 122 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 96/261 (36%), Positives = 162/261 (62%), Gaps = 6/261 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
PE+ I I +I PNP+ PR F+ E LE+L +SIK++G+IQP+IVR Y++IAGE
Sbjct: 2 PETLILIKIENISPNPYQPRLEFKQEELEELARSIKTNGLIQPIIVRESTVFGYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA+KMA L+E+P II+N+ N+ S+++AIVEN+QR DLNP+EEA Y+QL+ + T
Sbjct: 62 RRLRASKMAGLTEIPAIIKNISNQESMQLAIVENLQRSDLNPIEEAKAYQQLLEKNQMTH 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ +GKSR ++ N LR+L LP S+ + + K E+S GHAR L++ + +
Sbjct: 122 EELAQFMGKSRPYITNCLRLLNLPKSLSDAVEKGELSQGHARVLLTLKNAEEQEKWYQ-- 179
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI--KHRNNK 273
+ + V++ ++ + KK ++K+ ++ + E++++ ++GL + I K
Sbjct: 180 --KILTEDISVRKLEHLLKPAKKKKNRPKKKDIFIRNQEEELTKQLGLPVKIIVSKTGTK 237
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G+ + +++ E L I + L
Sbjct: 238 GEVSLHFQSEEDLNRIINKLK 258
>gi|309390340|gb|ADO78220.1| parB-like partition protein [Halanaerobium praevalens DSM 2228]
Length = 282
Score = 122 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 102/293 (34%), Positives = 168/293 (57%), Gaps = 14/293 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K+RLG+GL ALI + S D I I I NP+ PR F+ E L
Sbjct: 1 MTKKRLGKGLKALINDSENIDQS----------RVDNIFIDQIEANPYQPRKSFDKEALT 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ +G+IQP+ VR I Y+I+AGERR+RA+K+A L ++ IIR+ +++ LEI
Sbjct: 51 ELADSIQKNGLIQPITVRKIKAEKYQIVAGERRWRASKLAGLEKIAAIIRDFNDQEMLEI 110
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLNP+E A Y+Q+++ + TQ+++ VGKSRS+++N +R+LKL + V++
Sbjct: 111 ALIENIQRQDLNPIETAEAYKQMLANFEITQSELAEQVGKSRSNISNTIRLLKLAAKVQK 170
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKEKRKKIFE 241
++K I+ GHAR L+S +D + + + ++VR+TE+ V++ KK
Sbjct: 171 YLKKGIITTGHARALLSLADEQTQLAACENIIIQDLTVRETEKYVEKLKKPVANSKKEKT 230
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ K + + + +G + IK R I+ + +LK I L
Sbjct: 231 KKKLKPDWKKA-ASALENSLGKRVEIKQRKANNLLTIEIDNLAELKEIVEKLK 282
>gi|299143477|ref|ZP_07036557.1| stage 0 sporulation protein J [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517962|gb|EFI41701.1| stage 0 sporulation protein J [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 282
Score = 122 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 92/294 (31%), Positives = 152/294 (51%), Gaps = 14/294 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K LGRG+ + I + N + E I I IV N R F E L
Sbjct: 2 VKKGGLGRGINSFIKDTNAVERLLRQDDEK---ELKSILIDDIVANEKQARKKFSEEALN 58
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SI+ GIIQP+++R Y IIAGERR+RAAK+A L EVP +I+ + + + +I
Sbjct: 59 ELAKSIEEFGIIQPIVLRKT-QDKYMIIAGERRYRAAKIAGLKEVPAVIKEISEQEADKI 117
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+++ENVQR DLNP+EEA+GY+ +I +Y TQ ++ +GKSR ++ N +R+LKL V +
Sbjct: 118 SLIENVQRIDLNPIEEAIGYKNVIEQYNLTQEELAQALGKSRQYIGNTIRLLKLDERVMD 177
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ K ++ HA+ L++ D + +E + I++
Sbjct: 178 FVYKGLLTPSHAKLLLAIKDKNQQYKEAKRIVRLGNTVKETTLIFKSPATVPNDIYKEQA 237
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICS-LLGEND 297
++ +S+ +G +S+K + + I+Y ++E L IC +LG ++
Sbjct: 238 IRD---------LSNLLGTKVSLKGKGKVKKIEIEYYSDEDLSRICEAILGSDE 282
>gi|225871488|ref|YP_002747435.1| chromosome partitioning protein [Streptococcus equi subsp. equi
4047]
gi|225700892|emb|CAW95665.1| putative chromosome partitioning protein [Streptococcus equi subsp.
equi 4047]
Length = 257
Score = 122 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 93/258 (36%), Positives = 153/258 (59%), Gaps = 5/258 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E I I IV NP+ PR F + LE+L SI+++G+IQP+IVR D Y+++AGER
Sbjct: 3 EILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RF+AAK+A L ++P I++ + S++ AIVEN+QR +LN +EEA Y+ LI + T
Sbjct: 63 RFKAAKLAGLQKIPAIVKEISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHE 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
DI + +GKSR +++N +R+L+LP +R+ I IS GHAR L+S S P
Sbjct: 123 DIATYMGKSRPYISNTIRLLQLPDVIRQAIEDGTISAGHARALLSLSTPKEQELYF---- 178
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
++ D V++ + + + + ++ K ++ LEK++S +GL +++ +N+ GQ
Sbjct: 179 HNILDQGLSVRQIEQLVKTKHPPKKRNKHKTIFVKSLEKELSKSLGLPVALSLQKNDSGQ 238
Query: 276 FCIKYETNEQLKIICSLL 293
+ + E+L I + L
Sbjct: 239 LQLSFSNQEELNRIINKL 256
>gi|317486055|ref|ZP_07944908.1| ParB-like partition protein [Bilophila wadsworthia 3_1_6]
gi|316922682|gb|EFV43915.1| ParB-like partition protein [Bilophila wadsworthia 3_1_6]
Length = 317
Score = 122 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 100/305 (32%), Positives = 160/305 (52%), Gaps = 21/305 (6%)
Query: 11 GRGLAALIGEVNQS-------IDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
GRGL AL V + DS E ++P++ + I ++ P PR +F+ L
Sbjct: 2 GRGLDALFRNVTPAERPSSAKADSAEVPAPSVPKNTTTLPIAALTPCKGQPRKHFDEAAL 61
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNG---LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
++L SI+S G+IQPL+VR +Y+I+AGERR+RAA+ A L+EVPV +R + ++
Sbjct: 62 DELAASIRSQGVIQPLLVRPRRTETATIYEIVAGERRWRAAQRAGLTEVPVYLRELSDED 121
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L A++EN+QR+DLNPLEEA + L Y+Q ++ +GKSRS VAN LR+L+LP
Sbjct: 122 ALTAALIENLQREDLNPLEEAQAIQSLRERLPYSQEELAQRLGKSRSAVANSLRLLQLPR 181
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+++ ++ + GHAR + + L ++++++SVRD EE V
Sbjct: 182 PMQDALKDGVFTPGHARAVLALPERALQDILFNAVMTRRLSVRDAEEAVIHWKRHGLLPS 241
Query: 238 K--------IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
K + +++ V SI + G+ + YE+ EQL +
Sbjct: 242 SLMGASAPVARSARAPKPACIKLAIRQLRENVAPKASISGTDRAGRITLPYESEEQLAEL 301
Query: 290 CSLLG 294
S LG
Sbjct: 302 LSRLG 306
>gi|28572952|ref|NP_789732.1| chromosome partitioning protein ParB [Tropheryma whipplei TW08/27]
gi|28411085|emb|CAD67470.1| putative chromosome partitioning protein ParB [Tropheryma whipplei
TW08/27]
Length = 291
Score = 122 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 96/291 (32%), Positives = 149/291 (51%), Gaps = 14/291 (4%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIP----ESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
G+GL L E + + I I PNP PR F+ L +L
Sbjct: 2 GKGLDDLTPSAPADRGPIEAFFPSNSPFRFSGVINVPITDISPNPRQPRKVFDPNSLSEL 61
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SIK G IQP++VR G ++ GERR RAAKMA LS VP I++ +DN+ L A+
Sbjct: 62 ASSIKEVGFIQPIVVRKTKLGYV-LVIGERRLRAAKMAGLSHVPAIVKTLDNRDMLRQAL 120
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
EN+ R +LNP+EEAL Y +L+ E+ +Q+++G +GKSR +V N +R+L+LP V++++
Sbjct: 121 FENIHRAELNPIEEALAYSELLREFDVSQDELGQTLGKSRPYVTNTIRLLRLPPEVQDLL 180
Query: 187 RKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
K +I+ GHAR L+ + ++ + LA+ I +SVR E L+ K +
Sbjct: 181 TKGKITPGHARPLLALENRAEMIRLAKRIADAGLSVRQAEALIT------TSSPKRLFVA 234
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
K L + + +S+ KG+ I++ T L+ I +G
Sbjct: 235 GSVRKGLDAAAASLGREFDTKVSVNIGQRKGKIVIEFTTVADLRRILLKMG 285
>gi|255015765|ref|ZP_05287891.1| putative chromosome partitioning protein ParB [Bacteroides sp.
2_1_7]
gi|298377102|ref|ZP_06987056.1| spoOJ protein [Bacteroides sp. 3_1_19]
gi|298266086|gb|EFI07745.1| spoOJ protein [Bacteroides sp. 3_1_19]
Length = 295
Score = 122 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 155/302 (51%), Gaps = 16/302 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL ALI + +E I PNP PR+ FE
Sbjct: 1 MA-ALKRSALGRGLDALITMDDLKTGGSSSISEIELS--------KIQPNPEQPRSIFEE 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S G+IQP+ ++ I Y II+GERR+RA+ A L +P I+ +++
Sbjct: 52 ETLEELATSIRSLGVIQPITLKEIGPEQYMIISGERRYRASLKAGLERIPAYIKTAADEN 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+E+A++EN+QR+DLN +E AL Y++LI YG TQ + VGK R+ +AN LR+LKLP+
Sbjct: 112 VVEMALIENIQREDLNSIEIALAYQKLIDNYGLTQEGLSERVGKKRATIANYLRLLKLPA 171
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS------KKMSVRDTEELVQEQDNKKE 234
++ ++ ++I +GHAR L+ DP + +V + + E +
Sbjct: 172 EIQVGLKDKKIDMGHARALIPVDDPEVQLALYEQILAQGLSVRNVEEMVRNIAEGIQPEL 231
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
KK + + L+ +S + + + KG+ I + T E+L+ + LL
Sbjct: 232 PEKKKSDRKPILPEEFKLLKDHLSRYFNTKVQLTCNEKGKGKITIPFATEEELEQLIGLL 291
Query: 294 GE 295
+
Sbjct: 292 DK 293
>gi|295101874|emb|CBK99419.1| chromosome segregation DNA-binding protein [Faecalibacterium
prausnitzii L2-6]
Length = 288
Score = 122 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 92/288 (31%), Positives = 164/288 (56%), Gaps = 15/288 (5%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
+L + S +S + + + + P+P PR F+ E L +L SI HG
Sbjct: 13 ESLFEDAAPSFES--------DTRIETLPLREVEPDPGQPRKTFDDETLAELSASIAEHG 64
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
++QP+ VR +G Y I+AGERR+RA++MA L+EVPVI+++V ++ ++E+A+VEN+QR+D
Sbjct: 65 LLQPIAVRPKPSGGYLIVAGERRWRASRMAGLTEVPVIVKDVTDEQAMELALVENLQRED 124
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
L+P+EEA G +L++ TQ +GKSRS +AN LR+L LP +V E+++ I++G
Sbjct: 125 LDPVEEAAGIRELMTRCDLTQEQAARKLGKSRSALANSLRLLSLPETVLELLKSGFITIG 184
Query: 195 HARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
HA+ + + AQ+I +++VR E L ++ K +
Sbjct: 185 HAKVVLGLPAPELQEKAAQMIADNQLNVRQAEALCKKLAK----PAKEPVAAPLPSALPV 240
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
++E+ + +G + + + + KG+ + + +++QLK +LLG+ + E
Sbjct: 241 EVEESLKQALGSEVRVAYHDGKGKLTVHFYSDDQLKAFANLLGQYNME 288
>gi|218529840|ref|YP_002420656.1| parB-like partition protein [Methylobacterium chloromethanicum CM4]
gi|218522143|gb|ACK82728.1| parB-like partition protein [Methylobacterium chloromethanicum CM4]
Length = 298
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 121/298 (40%), Positives = 198/298 (66%), Gaps = 6/298 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ ++ RLGRGLAALIG+ + D+PE+ T +Q +++ + PNP NPR F
Sbjct: 1 MADDTARPRLGRGLAALIGDFSD--DAPEEAARTAGHAQRKVAVEFLRPNPRNPRRRFSE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L++L SI+ G+IQP++VRA+ G ++I+AGERR+RAA+ A L+EVPV++ +D+
Sbjct: 59 PELDELAASIRQRGVIQPIVVRALSGVPGTFEIVAGERRWRAAQRAGLNEVPVVVVEIDD 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++SLE AI+ENVQR DLN +EEA GYE+L+ E+ YTQ ++ ++GKSRSH+AN LR+L+L
Sbjct: 119 RTSLEYAILENVQRADLNAIEEASGYERLMGEFKYTQAELADLLGKSRSHLANTLRLLQL 178
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P ++++ + EI+ GHAR L+S DP ++A IV++ +SVR+ E L + + + +
Sbjct: 179 PPAIQDRVIASEITAGHARALLSVRDPEAVAHRIVAEGLSVREVEALAAAEAPQDDTPRP 238
Query: 239 -IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
S E + L LE + +G ++++K + + +G+ I+Y + E+ +C LG
Sbjct: 239 GRPRRSAEGDAALRSLEDVLGRALGYSVAVKAKASGEGEIRIRYTSAEERDALCRKLG 296
>gi|225869486|ref|YP_002745434.1| chromosome partitioning protein [Streptococcus equi subsp.
zooepidemicus]
gi|225702762|emb|CAX00927.1| putative chromosome partitioning protein [Streptococcus equi subsp.
zooepidemicus]
Length = 257
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 92/258 (35%), Positives = 152/258 (58%), Gaps = 5/258 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E I I IV NP+ PR F + LE+L SI+++G+IQP+IVR D Y+++AGER
Sbjct: 3 EILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RF+AAK+A L ++P I++ + S++ AIVEN+QR +LN +EEA Y+ LI + T
Sbjct: 63 RFKAAKLAGLQKIPAIVKEISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHE 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
DI + +GKSR +++N +R+L+LP +R+ I IS GHAR L+S S
Sbjct: 123 DIATYMGKSRPYISNTIRLLQLPDVIRQAIEDGTISAGHARALLSLSTSKEQELYF---- 178
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
++ D V++ + + + + ++ K ++ LEK++S +GL +++ +N+ GQ
Sbjct: 179 HNILDQGLSVRQIEQLVKTKHPPKKRNKHKTIFVKSLEKELSKSLGLPVALSLQKNDSGQ 238
Query: 276 FCIKYETNEQLKIICSLL 293
+ + E+L I + L
Sbjct: 239 LQLSFSNQEELNRIINKL 256
>gi|282912593|ref|ZP_06320389.1| spoOJ protein [Staphylococcus aureus subsp. aureus WBG10049]
gi|282324289|gb|EFB54605.1| spoOJ protein [Staphylococcus aureus subsp. aureus WBG10049]
gi|312436525|gb|ADQ75596.1| chromosome partitioning protein SpoOJ [Staphylococcus aureus subsp.
aureus TCH60]
Length = 281
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 83/276 (30%), Positives = 148/276 (53%), Gaps = 3/276 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
S ++ T+T E I I I PNP+ PR F+ L DL SIK +GI+QP++
Sbjct: 2 SELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIV 61
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
+R G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EE
Sbjct: 62 LRKTVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEE 120
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RTL+
Sbjct: 121 AESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLL 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE--KEKYLTDLEKKIS 258
+ D + ++ L + K K + K K++ E+++
Sbjct: 181 AIKDEQQMLRLAKRVVKEKWSVRYLENHFNELKNVSSKSETDKVDITKPKFIKQQERQLR 240
Query: 259 SKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ G + I + + G+ ++E+ + I L
Sbjct: 241 EQYGAKVDISIKKSVGKISFEFESQDDFVRIIKQLN 276
>gi|188580907|ref|YP_001924352.1| parB-like partition protein [Methylobacterium populi BJ001]
gi|179344405|gb|ACB79817.1| parB-like partition protein [Methylobacterium populi BJ001]
Length = 300
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 122/298 (40%), Positives = 198/298 (66%), Gaps = 6/298 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ ++ RLGRGLAALIG+ + D+PE+ T Q +++ + PNP NPR F
Sbjct: 3 MADDTARPRLGRGLAALIGDFSD--DAPEEAARTSGHPQRKVAVEFLRPNPRNPRRRFSE 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L++L SI+ G+IQP++VRA+ G ++I+AGERR+RAA+ A L+EVPV++ +D+
Sbjct: 61 PELDELAASIRQRGVIQPIVVRALSGVPGTFEIVAGERRWRAAQRAGLNEVPVVVVEIDD 120
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++SLE AI+ENVQR DLN +EEA GYE+L+ E+ YTQ ++ ++GKSRSH+AN LR+L+L
Sbjct: 121 RTSLEYAILENVQRADLNAIEEASGYERLMGEFKYTQAELADLLGKSRSHLANTLRLLQL 180
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P ++++ + EI+ GHAR L+S DP ++A+ IV++ MSVR+ E L + + + +
Sbjct: 181 PPAIQDRVIASEITAGHARALLSVRDPEAVARRIVAEGMSVREVEALAAAEAPQGDAPRP 240
Query: 239 -IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
S E + L LE + +G ++++K + + +G+ I+Y + E+ +C LG
Sbjct: 241 GRPRRSAEGDAALRSLEDVLGRALGYSVAVKAKASGEGEIRIRYASAEERDALCRKLG 298
>gi|160895501|ref|YP_001561083.1| parB-like partition protein [Delftia acidovorans SPH-1]
gi|160361085|gb|ABX32698.1| parB-like partition protein [Delftia acidovorans SPH-1]
Length = 311
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 102/305 (33%), Positives = 166/305 (54%), Gaps = 19/305 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCI-SIHSIVPNPHNPRNYFESEGL 63
+ LGRGL AL+G + D E I + +VP + PR + + L
Sbjct: 4 KKPKGLGRGLEALLG--PKVHDKEEGGGPVAETGLPSILQLDVMVPGQYQPRTHMDEGAL 61
Query: 64 EDLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+L +SIK+ GI+QP++VR G Y+IIAGERRFRAA++A L+EVPV++R V ++
Sbjct: 62 YELAESIKAQGIMQPILVRRLAKGDHAGKYEIIAGERRFRAARIAGLAEVPVLVREVPDE 121
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++ +A++EN+QR+DLNPLEEA G +L+ E+G T VG+SRS NILR+L L
Sbjct: 122 AAAAMALIENIQREDLNPLEEAQGLSRLVKEFGLTHEQAAQAVGRSRSAATNILRLLNLA 181
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V+ M+ +I +GHAR L+S + I +KK+SVR+ E LV++
Sbjct: 182 DPVQTMLMAGDIDMGHARALLSLDRAAQITAGNQIAAKKLSVREAEALVKKI-GADFSLV 240
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-----NK----GQFCIKYETNEQLKI 288
+ K + + +E+++S + ++ ++ + K G+ I++ + + L
Sbjct: 241 RQKSKKDGKSRDIKRVEEELSDLLMADVEVRIKKSVRRGGKLQEMGEVAIQFGSLDALNG 300
Query: 289 ICSLL 293
+ L
Sbjct: 301 LIERL 305
>gi|307720691|ref|YP_003891831.1| chromosome segregation DNA-binding protein [Sulfurimonas
autotrophica DSM 16294]
gi|306978784|gb|ADN08819.1| chromosome segregation DNA-binding protein [Sulfurimonas
autotrophica DSM 16294]
Length = 282
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 87/290 (30%), Positives = 166/290 (57%), Gaps = 13/290 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++LGRGL AL+GE++++ ++ + + I + I PNP PR F+ E L
Sbjct: 1 MKSQKLGRGLDALLGEMDEAYENEGSQNDV----VLEIPLKDIRPNPFQPRKSFDEEALL 56
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SI G+IQP++V D Y +IAGERRFRA+K+A L E+ ++ N D + +
Sbjct: 57 ELSESITKDGLIQPIVVTE-DIDGYVLIAGERRFRASKLAKLKEIRAVVLNSDEQKMRQF 115
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR++LN +E A Y +LI + T +++ +I+ KSR+H+ N LR+L+L +++
Sbjct: 116 ALIENIQREELNAMELAEAYTELIKLHDVTHDELSNIIHKSRAHITNTLRLLQLSPKIQK 175
Query: 185 MIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ +++IS GHA+ +V + + IV +K+SVR+ E +++ N + + E
Sbjct: 176 ALIEKKISAGHAKVMVGLDEKEQQLILNSIVGQKLSVREVETMIKSMKNTQTSSH-VPER 234
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
++ +++++K S G ++ + + I +++ +++ S
Sbjct: 235 NKLPGYDFSNVKQKFSD-FGYHVKASNN----KITISFDSQDEIDEFLSH 279
>gi|294786227|ref|ZP_06751481.1| ParB family protein [Parascardovia denticolens F0305]
gi|294485060|gb|EFG32694.1| ParB family protein [Parascardovia denticolens F0305]
Length = 451
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 94/281 (33%), Positives = 148/281 (52%), Gaps = 10/281 (3%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
I+I I PN PR+ F E L++L SIK G++QP+
Sbjct: 158 NAESGEGEEPDLVPVEGGYLAEIAIDDISPNEKQPRSVFAEEELQELADSIKEVGVLQPV 217
Query: 80 IVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
+VR D+ Y++I GERR RA+K+A L ++P I+R + S L A++EN+ R LNP
Sbjct: 218 VVRKRDDFATPYELIMGERRLRASKLAGLDKIPAIVRTTADDSMLRDALLENLHRVALNP 277
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA Y+Q++ ++G TQ + + KSR +AN LR+L+LP S+++ + +S GHAR
Sbjct: 278 LEEAAAYQQMMEDFGLTQEQLSQSISKSRPQIANTLRLLQLPGSIQKKVASGVLSAGHAR 337
Query: 198 TL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR-EKEKYLTDL 253
L S SLA+ +V++ +SVR TEE+V Q K+ ++K + +T+
Sbjct: 338 ALLALPSAEQMESLAKRVVAEGLSVRSTEEIVALQLGNKKNQRKRKPANIWSGSPEITE- 396
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+S + IK KG+ I + + + L I L+
Sbjct: 397 ---LSDFFETKVDIKGSGKKGKIEITFTSADDLHRIIDLVK 434
>gi|261250651|ref|ZP_05943226.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio orientalis CIP 102891]
gi|260939220|gb|EEX95207.1| chromosome (plasmid) partitioning protein ParB/stage 0 sporulation
protein J [Vibrio orientalis CIP 102891]
Length = 293
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 181/298 (60%), Gaps = 12/298 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTET----IPESQDCISIHSIVPNPHNPRNYFES 60
SKR LG+GL AL+ + + + + + ++I+S+ P + PR E+
Sbjct: 1 MSKRGLGKGLDALLSTSSLAREKQQNAQHSQELSSDGQLTDLNINSLKPGVYQPRKDMEA 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR +D+ ++IIAGERR+RAA+ A L +VP +++NV++++
Sbjct: 61 EALEELAASIESQGIIQPIVVRQVDSEKFEIIAGERRWRAARKAGLKQVPCVVKNVEDRA 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLN +EEA ++L E+ T + ++GKSR+ V+N+LR+ +L
Sbjct: 121 AIAMALIENIQREDLNVIEEAQALDRLQVEFKLTHQQVAEVIGKSRTTVSNLLRLNQLED 180
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ ++I +GHAR L + + +AQ + K+++VR TE+LV++ +
Sbjct: 181 DVKSLVADKKIEMGHARALLALQNEQQVDVAQQVAKKQLTVRQTEQLVKK-----CLQPV 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + ++ + +L +K+S +G ++I ++ + K + I + +L+ + + L
Sbjct: 236 VEGKNEPQDVEVQELSQKLSVMLGGKVAIVRNPSGKSKVTISLDEPHKLEQLIAKLES 293
>gi|197333926|ref|YP_002157359.1| chromosome partitioning protein ParB [Vibrio fischeri MJ11]
gi|197315416|gb|ACH64863.1| chromosome partitioning protein ParB [Vibrio fischeri MJ11]
Length = 294
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 173/302 (57%), Gaps = 15/302 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP----ESQDCISIHSIVPNPHNPRN 56
MSN KR LG+GL AL+ + + + ++ + IH + + PR
Sbjct: 1 MSN---KRGLGKGLDALLATSSIAREKQTAAAQSESISKDAQLVELGIHQLSAGQYQPRK 57
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
E E LE+L SI+S GIIQP++VR + Y+IIAGERRFRAAK A L VP ++++V
Sbjct: 58 VMEEEALEELSASIRSQGIIQPIVVREVAPQQYEIIAGERRFRAAKKAGLKHVPCVVKSV 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++K+++ +A++EN+QR+DLN +EEA E+L E+ T I ++GKSR+ V N+LR+
Sbjct: 118 EDKAAIAMALIENIQREDLNAIEEAQALERLQQEFELTHQQISDVIGKSRTTVTNLLRLN 177
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ ++ ++E+ +GHAR L + + LA +++ KK++VR TE+ V+E
Sbjct: 178 ALTDEVKGLVEQKELEMGHARALLALENEQQVELAHLVIKKKLTVRQTEQKVKELLA--- 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ E +E + + + K+SS +G + I + KG+ I ++ +L+ + + L
Sbjct: 235 --PQKEEEPKEVDTEMMTISDKLSSTLGSKVVISRNAAGKGKVTITFDEAHKLEQLIAKL 292
Query: 294 GE 295
Sbjct: 293 ES 294
>gi|254560706|ref|YP_003067801.1| chromosome-partitioning protein parB [Methylobacterium extorquens
DM4]
gi|254267984|emb|CAX23852.1| chromosome-partitioning protein parB [Methylobacterium extorquens
DM4]
Length = 298
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 121/298 (40%), Positives = 199/298 (66%), Gaps = 6/298 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ ++ RLGRGLAALIG+ + D+PE+ T +Q +++ + PNP NPR F
Sbjct: 1 MADDTARPRLGRGLAALIGDFSD--DAPEEAARTAGHAQRKVAVEFLRPNPRNPRRRFSE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L++L SI+ G+IQP++VRA+ G ++I+AGERR+RAA+ A L+EVPV++ +D+
Sbjct: 59 PELDELAASIRQRGVIQPIVVRALSGVPGTFEIVAGERRWRAAQRAGLNEVPVVVVEIDD 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++SLE AI+ENVQR DLN +EEA GYE+L+ E+ YTQ ++ ++GKSRSH+AN LR+L+L
Sbjct: 119 RTSLEYAILENVQRADLNAIEEASGYERLMGEFKYTQAELADLLGKSRSHLANTLRLLQL 178
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P ++++ + EI+ GHAR L+S DP ++A+ IV++ +SVR+ E L + + + +
Sbjct: 179 PPAIQDRVIASEITAGHARALLSVRDPEAVARRIVAEGLSVREVEALAAAEAPQDDTPRP 238
Query: 239 -IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
S E + L LE + +G ++++K + + +G+ I+Y + E+ +C LG
Sbjct: 239 GRPRRSAEGDAALRSLEDVLGRALGYSVAVKAKASGEGEIRIRYTSAEERDALCRKLG 296
>gi|260579554|ref|ZP_05847425.1| ParB family protein [Corynebacterium jeikeium ATCC 43734]
gi|258602325|gb|EEW15631.1| ParB family protein [Corynebacterium jeikeium ATCC 43734]
Length = 287
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 78/283 (27%), Positives = 137/283 (48%), Gaps = 9/283 (3%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + S E E + + + +I N PR F+ E L++L SIK G++QP++
Sbjct: 1 MEPTNVSRETSDEDFGATYQELPLSTIRTNAKQPREVFDEEALKELVHSIKEFGLMQPIV 60
Query: 81 VR--AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
VR ++ Y++I GERR RAAK A +P I+R + L A++EN+ R LNPL
Sbjct: 61 VRRAPNEDSTYELIMGERRLRAAKRAGFDVIPAIVRETADDEMLRDALLENIHRVQLNPL 120
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA Y+QL+ E+G TQ + +G+SR + N++R+L+LP SV+ + +S GHAR
Sbjct: 121 EEAAAYQQLMEEFGVTQEQLAKKIGRSRPLITNMIRLLQLPVSVQRRVGAGVLSAGHARA 180
Query: 199 LVSTSDPLSLAQVIVSKK-------MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L+ + + ++ + + L+ D K +++ + ++
Sbjct: 181 LLGLKSGPEEQERLATRVVSEGLSVRATEEAVTLLNRGDGATAVNKSSGRQAQQLPEEVS 240
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
S + + ++ KG+ +++ E I LL
Sbjct: 241 SWVDNASDALDTKVRVQMGKKKGKIVVEFGGPEDFDRIIELLK 283
>gi|163851013|ref|YP_001639056.1| parB-like partition protein [Methylobacterium extorquens PA1]
gi|163662618|gb|ABY29985.1| parB-like partition protein [Methylobacterium extorquens PA1]
Length = 300
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 121/298 (40%), Positives = 199/298 (66%), Gaps = 6/298 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ ++ RLGRGLAALIG+ + D+PE+ T +Q +++ + PNP NPR F
Sbjct: 3 MADDTARPRLGRGLAALIGDFSD--DAPEEAARTAGHAQRKVAVEFLRPNPRNPRRRFSE 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L++L SI+ G+IQP++VRA+ G ++I+AGERR+RAA+ A L+EVPV++ +D+
Sbjct: 61 PELDELAASIRQRGVIQPIVVRALSGVPGTFEIVAGERRWRAAQRAGLNEVPVVVVEIDD 120
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++SLE AI+ENVQR DLN +EEA GYE+L+ E+ YTQ ++ ++GKSRSH+AN LR+L+L
Sbjct: 121 RTSLEYAILENVQRADLNAIEEASGYERLMGEFKYTQAELADLLGKSRSHLANTLRLLQL 180
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P ++++ + EI+ GHAR L+S DP ++A+ IV++ +SVR+ E L + + + +
Sbjct: 181 PPAIQDRVIASEITAGHARALLSVRDPEAVARRIVAEGLSVREVEALAAAEAPQDDTPRP 240
Query: 239 -IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
S E + L LE + +G ++++K + + +G+ I+Y + E+ +C LG
Sbjct: 241 GRPRRSAEGDAALRSLEDVLGRALGYSVAVKAKASGEGEIRIRYTSAEERDALCRKLG 298
>gi|306834599|ref|ZP_07467711.1| ParB family partitioning protein [Streptococcus bovis ATCC 700338]
gi|304423235|gb|EFM26389.1| ParB family partitioning protein [Streptococcus bovis ATCC 700338]
Length = 258
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 93/261 (35%), Positives = 161/261 (61%), Gaps = 6/261 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
PE+ I I +I PNP+ PR F+ E LE+L +SIK++G+IQP+IVR Y++IAGE
Sbjct: 2 PETLTLIKIENISPNPYQPRLEFKQEELEELARSIKANGLIQPIIVRESTVFGYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA+K+A L+E+P II+N+ N+ S+++AIVEN+QR DLNP+EEA Y+QL+ + T
Sbjct: 62 RRLRASKIAGLTEIPAIIKNISNQESMQLAIVENLQRSDLNPIEEAKAYQQLLEKNQMTH 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ +GKSR ++ N LR+L LP S+ + + K ++S GHAR L++ + +
Sbjct: 122 EELAQFMGKSRPYITNCLRLLNLPRSLSDAVEKGDLSQGHARVLLTLKNAGEQEKWYQ-- 179
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS--IKHRNNK 273
+ + V++ + + K+ S++++ ++ + E++++ ++GL + I K
Sbjct: 180 --KILTEDLSVRKLERLLKPAKQKKNRSKKEDIFIRNQEEELAKQLGLPVKITISKTGTK 237
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G + +++ E L I + L
Sbjct: 238 GDVSLYFQSEEDLNRIINKLK 258
>gi|222152193|ref|YP_002561353.1| chromosome partitioning protein ParB homolog [Macrococcus
caseolyticus JCSC5402]
gi|222121322|dbj|BAH18657.1| chromosome partitioning protein ParB homolog [Macrococcus
caseolyticus JCSC5402]
Length = 287
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 94/268 (35%), Positives = 159/268 (59%), Gaps = 4/268 (1%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ E + +++ + NP+ PR F+ LE+L +SIK HG++QP++VR Y
Sbjct: 18 QENRQDEIIEELNVAELRANPYQPRIEFDEAALEELSESIKLHGVLQPIVVRK-SVKGYD 76
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
I+ GERRFRA+KMA +++P I++ + ++ +E+AI+EN+QR+DLNPLEEA Y L+
Sbjct: 77 IVVGERRFRASKMAGKNKIPAIVKTLTDQQMMELAIIENLQREDLNPLEEAKSYATLMKH 136
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLS 207
TQ + +GKSRS++AN+LR+L LP V+ MI ++EIS GH RTL + D +
Sbjct: 137 LNLTQAEAADRLGKSRSYIANLLRLLNLPQEVKMMISQKEISGGHGRTLLGLKNEEDIIK 196
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
+A +V + MSVR E+ ++ + ++ + + ++K K+L E+ + +G + I
Sbjct: 197 VAHKVVQEAMSVRALEDFIKVMNQEELEPQSKEVKIKQKPKFLVKHEESLKQNLGTKVEI 256
Query: 268 KHRNNKGQFCIKYETNEQLKIICSLLGE 295
KG+ I++ + E+ + LL
Sbjct: 257 SKSRKKGKISIEFTSEEEFNRLIHLLEN 284
>gi|291531936|emb|CBK97521.1| chromosome segregation DNA-binding protein [Eubacterium siraeum
70/3]
Length = 281
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 91/268 (33%), Positives = 159/268 (59%), Gaps = 4/268 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ + E + + I PN PR F+ L L SI+ +G+IQPL+VR++ +G
Sbjct: 17 DNSFDEDDEGISTLKLTDIEPNKSQPRKNFDITALNTLADSIRQNGVIQPLLVRSMPDGT 76
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+I+AGERR+RAAKMA L+EVPV+++ + + + +IA++EN+QR++LNP+EEA GY++L+
Sbjct: 77 YQIVAGERRWRAAKMAGLTEVPVLVKELTDLQAQQIALIENLQRENLNPIEEANGYKELM 136
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
++G TQ ++ +VGK+RS +AN LR+L LP + EM+ E+S GH + L+ S+
Sbjct: 137 DKFGMTQEEVARVVGKARSSIANSLRLLNLPPIIAEMVSNNELSTGHCKVLLGVSET--- 193
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK 268
+ +V + V+E + + K + ++K+ + T+ E ++ + N+SI
Sbjct: 194 -KDMVELAHKAAGKDVSVREMERMVKALDKKEKPEKKKDTFYTEAEISLAKALETNVSIV 252
Query: 269 HRNNKGQFCIKYETNEQLKIICSLLGEN 296
K I++ ++E L I + L +
Sbjct: 253 PGKKKSTIQIEFYSDEDLTDIINRLANS 280
>gi|314965744|gb|EFT09843.1| ParB-like partition protein [Propionibacterium acnes HL082PA2]
gi|314982887|gb|EFT26979.1| ParB-like partition protein [Propionibacterium acnes HL110PA3]
gi|315091195|gb|EFT63171.1| ParB-like partition protein [Propionibacterium acnes HL110PA4]
gi|315094426|gb|EFT66402.1| ParB-like partition protein [Propionibacterium acnes HL060PA1]
gi|315105147|gb|EFT77123.1| ParB-like partition protein [Propionibacterium acnes HL050PA2]
gi|327328922|gb|EGE70682.1| ParB family protein [Propionibacterium acnes HL103PA1]
Length = 308
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 95/309 (30%), Positives = 165/309 (53%), Gaps = 15/309 (4%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M+ LGRG + S D + IS+ + P
Sbjct: 1 MTVAAKHSGLGRGFGEFFQRTDLDDDDEERVDDASTDGDAINEPVGGSRLELISVDEVSP 60
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N PR F E L +L +SI++ G++QP++V DNG Y+++ GERR+RAA+ A L+ V
Sbjct: 61 NARQPRKTFNEEELTELSESIRAVGVLQPVVVTPADNG-YELVMGERRWRAARKAGLATV 119
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 120 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQI 179
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + EI+ GHAR L++ +P A +V + +SVR TEELV
Sbjct: 180 ANTIRLLKLSAGVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELV 239
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
++ + + K ++ L +++S + + ++ RN +G + NE+L
Sbjct: 240 RQTLDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEEL 299
Query: 287 KIICSLLGE 295
+ + ++ +
Sbjct: 300 ERLINIFSD 308
>gi|227496613|ref|ZP_03926891.1| chromosome segregation DNA-binding protein [Actinomyces
urogenitalis DSM 15434]
gi|226833893|gb|EEH66276.1| chromosome segregation DNA-binding protein [Actinomyces
urogenitalis DSM 15434]
Length = 294
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 88/269 (32%), Positives = 140/269 (52%), Gaps = 10/269 (3%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG----- 87
+ + + I PNP PR F+ + + +L SIK G++QP++VR +D
Sbjct: 19 PVPGATFADLPVALIQPNPRQPRQVFDDDDIAELAASIKEVGLLQPIVVRRVDGPDGEAA 78
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y++I GERR RA+K A L +P ++R +++ L A++EN+ R LNPLEEA Y+QL
Sbjct: 79 HYELIMGERRLRASKEAGLETIPAVVRYTEDEDLLRDALLENLHRVQLNPLEEAAAYQQL 138
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSD 204
+ ++ T ++ + +SRS ++N LR++KLP V+ + +S GHAR L +
Sbjct: 139 LEDFSCTHAELSQRIARSRSQISNTLRLMKLPPLVQRRVAAGVLSAGHARALLGLPDAAA 198
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
LAQ IV++ +SVR TEELV D K SR + L ++S
Sbjct: 199 MERLAQRIVAEGLSVRATEELVALHDEPAGDVKAPVLRSRSTP--MPQLSSRLSDVFDTR 256
Query: 265 ISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + KG+ I++ +E L I L
Sbjct: 257 VKVTQGAKKGKITIEFAGSEDLARIVGAL 285
>gi|315225760|ref|ZP_07867548.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Parascardovia
denticolens DSM 10105]
gi|315119892|gb|EFT83024.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Parascardovia
denticolens DSM 10105]
Length = 531
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 94/281 (33%), Positives = 148/281 (52%), Gaps = 10/281 (3%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
I+I I PN PR+ F E L++L SIK G++QP+
Sbjct: 238 NAESGEGEEPDLVPVEGGYLAEIAIDDISPNEKQPRSVFAEEELQELADSIKEVGVLQPV 297
Query: 80 IVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
+VR D+ Y++I GERR RA+K+A L ++P I+R + S L A++EN+ R LNP
Sbjct: 298 VVRKRDDFATPYELIMGERRLRASKLAGLDKIPAIVRTTADDSMLRDALLENLHRVALNP 357
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LEEA Y+Q++ ++G TQ + + KSR +AN LR+L+LP S+++ + +S GHAR
Sbjct: 358 LEEAAAYQQMMEDFGLTQEQLSQSISKSRPQIANTLRLLQLPGSIQKKVASGVLSAGHAR 417
Query: 198 TL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR-EKEKYLTDL 253
L S SLA+ +V++ +SVR TEE+V Q K+ ++K + +T+
Sbjct: 418 ALLALPSAEQMESLAKRVVAEGLSVRSTEEIVALQLGNKKNQRKRKPANIWSGSPEITE- 476
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+S + IK KG+ I + + + L I L+
Sbjct: 477 ---LSDFFETKVDIKGSGKKGKIEITFTSADDLHRIIDLVK 514
>gi|169832366|ref|YP_001718348.1| parB-like partition protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169639210|gb|ACA60716.1| parB-like partition protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 286
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 87/284 (30%), Positives = 144/284 (50%), Gaps = 7/284 (2%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
GRGL AL+ + + + I + I NP R F+ E L +L SI
Sbjct: 2 GRGLDALLPG-----NVGAEAAAASGDGLREIPVDRIRTNPRQSRQVFDQERLAELAASI 56
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+ G++QP++VR +G Y++I+GERR RA S +P ++R + + ++EN+
Sbjct: 57 EEVGLVQPVVVRQSGDG-YELISGERRLRAFLALGRSRIPAVVREMPEVEAAMAVLIENI 115
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
QR++LNPLEEA+ Y +L++E+ TQ ++ VGKSR HV N LR+L LP V+E+I
Sbjct: 116 QRENLNPLEEAIAYRRLVNEFDLTQEEVARRVGKSRVHVTNTLRLLSLPLQVQEIIGSGA 175
Query: 191 ISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF-EGSREKEKY 249
++ GHAR L + D ++ L +E N + R+ E
Sbjct: 176 LTAGHARALGAVDDAARQVELAQRAVARGLSVRALEEEVRNAAAQAASSRGSRKRDVESG 235
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
L L ++ + + ++I+ NKG+ I+Y ++L+ + L
Sbjct: 236 LKSLLRERAGALAARVNIRGDQNKGRIEIRYRNEQELEEVLDWL 279
>gi|59713179|ref|YP_205955.1| chromosome partitioning protein ParB [Vibrio fischeri ES114]
gi|59481280|gb|AAW87067.1| chromosome partitioning protein ParB [Vibrio fischeri ES114]
Length = 294
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 174/302 (57%), Gaps = 15/302 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIP----ESQDCISIHSIVPNPHNPRN 56
MSN KR LG+GL AL+ + + + ++ + IH + + PR
Sbjct: 1 MSN---KRGLGKGLDALLATSSIAREKQTAAAQSESISKDAQLVELGIHQLSAGQYQPRK 57
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
E E LE+L SI+S GIIQP++VR + + Y+IIAGERRFRAAK A L VP ++++V
Sbjct: 58 VMEEEALEELSASIRSQGIIQPIVVREVASQQYEIIAGERRFRAAKKAGLKHVPCVVKSV 117
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
++K+++ +A++EN+QR+DLN +EEA E+L E+ T I ++GKSR+ V N+LR+
Sbjct: 118 EDKAAIAMALIENIQREDLNAIEEAQALERLQQEFELTHQQISDVIGKSRTTVTNLLRLN 177
Query: 177 KLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
L V+ ++ ++E+ +GHAR L + + LA +++ KK++VR TE+ V+E
Sbjct: 178 ALTDEVKGLVEQKELEMGHARALLALENEQQVELAHLVIKKKLTVRQTEQKVKELLA--- 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ E +E + + + K+SS +G + I + KG+ I ++ +L+ + + L
Sbjct: 235 --PQKEEEPKEVDTEMMTISDKLSSTLGSKVVISRNAAGKGKVTITFDEAHKLEQLIAKL 292
Query: 294 GE 295
Sbjct: 293 ES 294
>gi|303233449|ref|ZP_07320117.1| ParB-like protein [Atopobium vaginae PB189-T1-4]
gi|302480457|gb|EFL43549.1| ParB-like protein [Atopobium vaginae PB189-T1-4]
Length = 291
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 164/296 (55%), Gaps = 19/296 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K LG+GL +L+ + I + Q + + SI N PR +F+
Sbjct: 1 MA---KKTGLGKGLESLMSGADAET--------GISQQQLELPLSSIRVNKSQPRKHFDE 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L QSIK HG++QP++VR Y+I+AGERR++A+K A L +VPV ++++ +
Sbjct: 50 HELEELTQSIKEHGVLQPILVRKKGAV-YEIVAGERRYQASKRAGLKKVPVCVKDIKDDQ 108
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L++A++EN+QR DLNP+EEA Y+QLI E TQ ++G + KSRS +AN +R+L LP
Sbjct: 109 TLKLALIENLQRSDLNPIEEARAYKQLIDELALTQEELGVTLSKSRSAIANTMRLLDLPQ 168
Query: 181 SVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+++++ + I+ GHAR + T+ LAQ +V++ +SVR TE L + RK
Sbjct: 169 DIQQLMIEGVITAGHARALLAVSDTAAQQQLAQKVVTEHLSVRQTENLASLLLGSTQDRK 228
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ K + S + + +K K + I+++++ L + L
Sbjct: 229 PRAVTPQS----YKRAAKHLRSILHAKVKVKRVGEKNKIEIEFDSDAMLARVVRAL 280
>gi|82750072|ref|YP_415813.1| hypothetical protein SAB0311 [Staphylococcus aureus RF122]
gi|82655603|emb|CAI79999.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 281
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 89/277 (32%), Positives = 155/277 (55%), Gaps = 5/277 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
S ++ T+T E I + I PNP+ PR F+ L DL SIK +GI+QP++
Sbjct: 2 SELSKSEDQRITKTKDEQIKQIDMSDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIV 61
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
+R G Y ++ GERRFRA+K+A L V II+++ ++ +E+A++EN+QR+DLN +EE
Sbjct: 62 LRKTVQGYYIVV-GERRFRASKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEE 120
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART-- 198
A Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT
Sbjct: 121 AESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLL 180
Query: 199 -LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ L LA+ +V +K SVR E V E N + + + K K++ E+++
Sbjct: 181 AIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKN-VSSKSETDKVDITKPKFIKQQERQL 239
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ G + I + + G+ ++E+ + I L
Sbjct: 240 REQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLN 276
>gi|313112588|ref|ZP_07798247.1| ParB-like partition protein [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310625084|gb|EFQ08380.1| ParB-like partition protein [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 289
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 92/288 (31%), Positives = 164/288 (56%), Gaps = 15/288 (5%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
+L + +S K D + + I P+P PR F+ + L +L SI HG
Sbjct: 13 DSLFEDAAPVFESGAK--------VDTLPLREIEPDPEQPRKTFDEQALGELAASIAEHG 64
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
++QP+ VR G Y I+AGERR+RA +MA L++VPV+I+ V ++ ++E+A+VEN+QR+D
Sbjct: 65 LLQPIAVRPRPRGGYSIVAGERRWRACRMAGLNDVPVVIKEVSDEQAMELALVENLQRED 124
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
L+P+EEA G +L++ G TQ +GKSRS +AN LR+L LP +V E+++ I++G
Sbjct: 125 LDPVEEATGIRELMTRCGLTQEQAAQKLGKSRSALANSLRLLNLPENVLELLKSGFINIG 184
Query: 195 HARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
HA+ + + AQ+I +++VR E L ++ ++ ++
Sbjct: 185 HAKVILSLPTPELQEQAAQIIADNQLNVRQAEALCKKLAKPAKEPREPQPRGTLP----V 240
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
++E+ + +G +++ + + KG+ + + ++EQL+ +LLG+ E
Sbjct: 241 EVEESLKQVLGSEVNVAYHDGKGRLTVHFYSDEQLRAFANLLGQYQNE 288
>gi|319440494|ref|ZP_07989650.1| chromosome partitioning protein ParB [Corynebacterium variabile DSM
44702]
Length = 393
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 143/267 (53%), Gaps = 8/267 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL---YKII 92
+ I + I NP NPR FE E L +L SI+ G++QP++VR + G +++I
Sbjct: 123 GATYREIPLTDIRTNPKNPRQVFEEEALGELVHSIREFGLLQPIVVRPLPQGSEVAFELI 182
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
GERR RA ++A L +P I+R D++ L A++EN+ R LNPLEEA Y+QL+ E+
Sbjct: 183 MGERRLRATELAGLEVIPAIVRETDDQDMLRDALLENIHRVQLNPLEEASAYQQLLEEFD 242
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL----VSTSDPLSL 208
+Q ++ +G+SR + N++R+L+LP V+ + +S GHAR + +L
Sbjct: 243 VSQAELARRIGRSRPLITNMIRLLQLPVPVQRKVAAGVLSAGHARAILGVKAGVEAQEAL 302
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY-LTDLEKKISSKVGLNISI 267
A IV++ +SVR TEE V + +K + ++ + + + + +++
Sbjct: 303 AGRIVAEGLSVRATEEAVVLLNRGDGAEEKPKKREPREQPDAVREWATSAADALDTRVTV 362
Query: 268 KHRNNKGQFCIKYETNEQLKIICSLLG 294
+ KG+ +++ ++ + I LL
Sbjct: 363 QMGAKKGKIVVEFGDSDDFERITDLLK 389
>gi|255034022|ref|YP_003084643.1| parB-like partition protein [Dyadobacter fermentans DSM 18053]
gi|254946778|gb|ACT91478.1| parB-like partition protein [Dyadobacter fermentans DSM 18053]
Length = 305
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 89/278 (32%), Positives = 157/278 (56%), Gaps = 5/278 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+N S + S + I + I NP+ PR F+ E LE+L SI+ GIIQP+
Sbjct: 27 INTPRTSTRMAPAEVIGSMNEIHVSQIEANPYQPRTKFDQESLEELADSIRVQGIIQPIT 86
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR + Y++I+GERR +A++ ++ +P IR +++ LE+A++EN+QR++LN +E
Sbjct: 87 VRQLSEDSYQLISGERRLQASRSLGMTTIPAYIRTANDQQMLEMALIENIQRENLNAIEI 146
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
AL Y++LI E Q ++G+ VGK+R+ V N +R+LKLP ++ +R ++IS+GHAR L+
Sbjct: 147 ALSYQRLILECSLKQEELGARVGKNRTTVNNYIRLLKLPPVIQAALRDDKISMGHARALI 206
Query: 201 STSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ + S ++ + SVR E+ V++ + + + L+ ++
Sbjct: 207 TINSDQSQLKIFNQIIEEGWSVRKVEDEVRKL-GMVSNIPIESKKQPTINQEIKSLQFQL 265
Query: 258 SSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
SS G +S+K + +KG+ I + + ++LK I L
Sbjct: 266 SSYFGAKVSVKANEQHKGEIKIPFGSQDELKKILETLK 303
>gi|152968445|ref|YP_001364229.1| parB-like partition protein [Kineococcus radiotolerans SRS30216]
gi|151362962|gb|ABS05965.1| parB-like partition protein [Kineococcus radiotolerans SRS30216]
Length = 410
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 5/279 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
Q + + + + SIVPNP PR F+ + L +L SI+ G++QP+
Sbjct: 126 TAAQPSAVDDGLVDVPGARFAEVPVTSIVPNPRQPRTVFDEDDLSELVHSIREIGVLQPV 185
Query: 80 IVRAIDNG-----LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
+VRA++ ++++ GERR+RAA A L+ +P I+R + L A++EN+ R
Sbjct: 186 VVRAVEPAEDGVARFELVMGERRWRAATEAGLAAIPAIVRETADDDLLRDALLENLHRSQ 245
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
LNPLEEA Y+QL+ ++G T ++ S +G+SR ++N LR++KLP V+ + IS G
Sbjct: 246 LNPLEEAAAYQQLLDDFGCTHEELASRIGRSRPQISNTLRLMKLPPLVQRRVAAGVISAG 305
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
HAR L+S D ++ ++ + + + + L
Sbjct: 306 HARALLSLEDGAAMERLAQRIVAEGLSVRAVEEIIALGDADHEPRRRNPARPQPELDSRA 365
Query: 255 KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ ++ + I +G+ + + E L I LL
Sbjct: 366 STLADRLDTRVKISMGRTRGRVTVDFAGLEDLDRILRLL 404
Score = 39.7 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPE 37
MS +R LGRGL ALI + S P
Sbjct: 1 MSE--KRRGLGRGLGALIPSSGPTTTSRGGLATIPPA 35
>gi|228474215|ref|ZP_04058952.1| spoOJ protein [Staphylococcus hominis SK119]
gi|228271910|gb|EEK13247.1| spoOJ protein [Staphylococcus hominis SK119]
Length = 274
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 95/265 (35%), Positives = 158/265 (59%), Gaps = 5/265 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E I I SI NP+ PR F+ E L+DL +SI +HGI+QP+++R NG Y ++
Sbjct: 12 NNDEHVQHIKISSIKANPYQPRKTFDEEKLQDLAESITTHGILQPIVLRKTINGYYIVV- 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRA+K+A L EVP I++++ + +E+AI+EN+QR+DLN +EEA Y++L+++ G
Sbjct: 71 GERRFRASKLAGLEEVPAIVKSLSDSDMMELAIIENLQREDLNAIEEAESYQRLMNDLGL 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQ 210
TQ + +GKSR ++AN+LR+L LPS + +++R+ +S H RTL + + +
Sbjct: 131 TQQKVAERLGKSRPYIANMLRLLNLPSDIAKLVRENRMSGAHGRTLLALKDVNTMKRIGK 190
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+ + SVR E++V E + + KK + K K++ E+ + K G +I I
Sbjct: 191 QAIKEGWSVRYLEKVVSEIQDG-GQSKKEKLNTPSKPKFIQKQERALKEKFGTHIDISVS 249
Query: 271 NNKGQFCIKYETNEQLKIICSLLGE 295
N G+ ++++ + + I L E
Sbjct: 250 KNVGKIVFEFKSEAEFRRIIDKLNE 274
>gi|229822691|ref|YP_002884217.1| parB-like partition protein [Beutenbergia cavernae DSM 12333]
gi|229568604|gb|ACQ82455.1| parB-like partition protein [Beutenbergia cavernae DSM 12333]
Length = 472
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 88/279 (31%), Positives = 151/279 (54%), Gaps = 9/279 (3%)
Query: 22 NQSIDSPEKKTETIPE-SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ ++D P+ +P + I + ++ PN PR F+ + LE+L SI+ G++QP++
Sbjct: 172 STAVDEPDDGLVPVPGATFAEIPVDAVAPNAQQPRRVFDEDDLEELAGSIREVGVLQPVV 231
Query: 81 VRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
VR + Y++I GERR+RA+++A VP I+R + L A++EN+ R LN
Sbjct: 232 VRRVADVEGSPRYELIMGERRWRASRLAGNDTVPAIVRETADTDLLRDALLENLHRVQLN 291
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
PLEEA Y+QL+ ++ T +++ S + +SR ++N LR+LKLP V+ + +S GHA
Sbjct: 292 PLEEAAAYQQLLDDFSCTHDELASRISRSRPQISNTLRLLKLPPLVQRRVAAGVLSAGHA 351
Query: 197 RTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQ-EQDNKKEKRKKIFEGSREKEKYLTD 252
R L + LAQ IV++ +SVR TEE+V +D + + E L +
Sbjct: 352 RALLGLSDGAAMERLAQRIVAEGLSVRATEEIVALGEDEPMRPELRRRPRAGEHTAALEN 411
Query: 253 LEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICS 291
L +++S + + I KG+ I++ + + L I
Sbjct: 412 LGRRLSDRWDTKVKIALGQRKGRISIEFASVQDLNRILD 450
>gi|332186965|ref|ZP_08388706.1| parB-like partition s domain protein [Sphingomonas sp. S17]
gi|332012975|gb|EGI55039.1| parB-like partition s domain protein [Sphingomonas sp. S17]
Length = 284
Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 99/269 (36%), Positives = 162/269 (60%), Gaps = 9/269 (3%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
+ + + ++ P+P PR +FE L++L SI + G+IQP++VR Y+I+
Sbjct: 12 QPAIGGVRMLPVGAMSPHPDQPRRHFEEAALDELAASIAARGLIQPIVVRPHGKD-YQIV 70
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR+RAA+ A L EVPV++R D+ +LE+A++EN+QR+DLN +EEA Y++L E+G
Sbjct: 71 AGERRWRAAQRARLHEVPVVVREFDDAQTLEVALIENIQRQDLNAIEEAQAYQRLAGEFG 130
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI 212
+TQ + IV KSRSHVAN+LR+L+LP +V+ + +S+GHAR L+ SLA +
Sbjct: 131 HTQEALAKIVHKSRSHVANLLRLLELPDTVQAQVVSGALSMGHARALLGADQVESLADQV 190
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY--------LTDLEKKISSKVGLN 264
+++ +SVR+TE+L +E K + + + + LE +++ +GL+
Sbjct: 191 IARGLSVRETEKLTREAKGGGRKTGEASDKPSGPKGNGQDAADADIAALESQLADLLGLS 250
Query: 265 ISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ I H G + Y T +QL ++C L
Sbjct: 251 VRISHGEKGGTLTLSYSTLDQLDMVCQRL 279
>gi|168334912|ref|ZP_02693032.1| stage 0 sporulation protein J [Epulopiscium sp. 'N.t. morphotype
B']
Length = 282
Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 85/293 (29%), Positives = 146/293 (49%), Gaps = 16/293 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
LG+GL L E ++S E +SI I+ N + PR F + +E
Sbjct: 1 MKTAALGKGLKTLFSEQEVHLESSESTET------RIVSITDIILNKNQPRKLFNEQEIE 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLE 123
+L SI HG++ P++V+ +D+ Y+IIAGERR+RA K A L E+ V I + LE
Sbjct: 55 ELKNSIIRHGLLTPILVQKVDDK-YQIIAGERRYRAVKAADLKEILVRVIPPKTEEEILE 113
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
I+++EN+QR+DLN +E L +Y T + + +R V N +R+ +LP ++
Sbjct: 114 ISLIENIQRQDLNAVEIGEALYILTKKYKLTHEKVAEALSINRVSVTNFIRLNELPEEIK 173
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQDNKKEKRKKIF 240
E IR+++I+ G A+ ++ V K SVRD EE V++ K+
Sbjct: 174 ESIREKKINFGAAKAILRVESDADKIDVTRKAIANKWSVRDIEEYVKKLKT-----PKVK 228
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + + ++E K+ +++ +KG+ I+Y +E L+ I ++
Sbjct: 229 TEKKVMDVFYKNIEDKLRVTFNTKVTLTKLKDKGRIEIEYYNDEDLERILGVI 281
>gi|297625194|ref|YP_003706628.1| parB-like partition protein [Truepera radiovictrix DSM 17093]
gi|297166374|gb|ADI16085.1| parB-like partition protein [Truepera radiovictrix DSM 17093]
Length = 292
Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 86/305 (28%), Positives = 149/305 (48%), Gaps = 29/305 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS + LGRGL AL+ +V + + + + ++ + PR +
Sbjct: 1 MS--AKRSSLGRGLDALLPKVEK------------GRGIEQLPLEALRVSAFQPRKRIDP 46
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +L S+ G++QPL+VR D+G Y+I+AGERRFRAA+ L+ VP I++ + ++
Sbjct: 47 AAIAELASSVAQKGVLQPLLVRPADSG-YEIVAGERRFRAAQQVGLATVPAIVKPLTDRE 105
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LEIA++EN+QR+ L+ +EEA ++QL+ Q + VGKSRS VAN LR+L+L
Sbjct: 106 TLEIALIENLQRESLSAVEEARAFKQLMDFGL-NQEAVAQAVGKSRSAVANTLRLLQLDG 164
Query: 181 SVREMIRKEEISLGHARTLVSTSD--PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+ + IS GHAR ++S + + I+ + +SVR E L +
Sbjct: 165 EALAALDEGRISAGHARAILSLPEAARPWALRRILEEGLSVRQAERLEYPAEAVAGGGVP 224
Query: 239 IFEGSREKEKYLTDLEKK----------ISSKVGLNISIKHRNNKGQFCIKYETNEQLKI 288
E + ++ +G + I KG+ + + + ++L+
Sbjct: 225 EGRTKAPAPTAPPHAEDEVAARAHLEAGLTRHLGTKVRI-VGATKGRIELHFFSPDELQR 283
Query: 289 ICSLL 293
+ LL
Sbjct: 284 LLELL 288
>gi|296284827|ref|ZP_06862825.1| chromosome partitioning protein [Citromicrobium bathyomarinum
JL354]
Length = 330
Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 100/277 (36%), Positives = 161/277 (58%), Gaps = 5/277 (1%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ + E I + I P P PR F+ E L+DL +SI G+IQP+IV
Sbjct: 49 SSAAGQGEGGAGAPRSGLASIPVARIEPLPGQPRQIFDDEALDDLARSIAQRGVIQPVIV 108
Query: 82 RAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
R ++ Y+++AGERR+RAA+ A L E+P IIR++D + + IA++EN+QR+DLNP+EE
Sbjct: 109 RPLERKGRYQLVAGERRWRAAQRAKLHEIPAIIRDLDQREVMAIALIENIQREDLNPIEE 168
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A Y+ L E G +Q +I +V KSRSHVAN R+L LP V + + ++S+GHAR L+
Sbjct: 169 ARAYQHLADEEGMSQAEIAELVDKSRSHVANHQRLLALPEKVIAYVERGQLSMGHARALI 228
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQ--DNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
LA+ V++ +SVRD E+ V+ + + + K + + + + +E+ +
Sbjct: 229 GHDAAEMLAEEAVTRNLSVRDVEKRVRSKGGASGRASSAKASKSGSHESEDIAAVERHLE 288
Query: 259 SKVGLNISIKHRNN--KGQFCIKYETNEQLKIICSLL 293
+G+++ IK + G IKY+T +QL ++C L
Sbjct: 289 EFLGMSLKIKPDADPSSGAITIKYKTLDQLDLLCQRL 325
>gi|289551787|ref|YP_003472691.1| Chromosome (plasmid) partitioning protein ParB [Staphylococcus
lugdunensis HKU09-01]
gi|289181318|gb|ADC88563.1| Chromosome (plasmid) partitioning protein ParB [Staphylococcus
lugdunensis HKU09-01]
Length = 275
Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 86/273 (31%), Positives = 160/273 (58%), Gaps = 5/273 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+I++ + E I+I I+PNP+ PR F++E L DL +SIK HGI+QP+++R
Sbjct: 2 AIENDHRLQINEDEQIRWIAIEEIMPNPYQPRKNFDAERLNDLAESIKIHGILQPIVLRQ 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G Y ++ GERR+RA+++A L+++P II+ + + +E+AI+EN+QR+DLN +EEA
Sbjct: 62 TVQGYYIVV-GERRYRASQLAGLTKLPSIIKELSDADMMELAIIENLQREDLNAIEEAES 120
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LV 200
Y++L+ + TQ ++ +GKSR ++AN+LR+L LP+S+++ +++ E+S H RT +
Sbjct: 121 YQRLMDDLQLTQQEVAHRLGKSRPYIANMLRLLHLPTSLKDSVQRGELSGAHGRTLLGIK 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
+ + + + SVR E+ V + K+ + K K++ E+ + +
Sbjct: 181 DKQRMIQVGRKAFKESWSVRYLEKYVNNIQEGSQPYPKVTKEP-LKPKFIQKQERLLREQ 239
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
G + I + G ++++ E+ + + LL
Sbjct: 240 YGAKVDISTKKQVGAITFEFKSKEEFERLIKLL 272
>gi|240138144|ref|YP_002962616.1| chromosome-partitioning protein parB [Methylobacterium extorquens
AM1]
gi|240008113|gb|ACS39339.1| chromosome-partitioning protein parB [Methylobacterium extorquens
AM1]
Length = 298
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 120/298 (40%), Positives = 197/298 (66%), Gaps = 6/298 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ ++ RLGRGLAALIG+ + +PE+ T +Q +++ + PNP NPR F
Sbjct: 1 MADDTARPRLGRGLAALIGDFSDG--APEEAARTAGHAQRKVAVEFLRPNPRNPRRRFSE 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
L++L SI+ G+IQP++VRA+ G ++I+AGERR+RAA+ A L+EVPV++ +D+
Sbjct: 59 PELDELAASIRQRGVIQPIVVRALSGVPGTFEIVAGERRWRAAQRAGLNEVPVVVVEIDD 118
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
++SLE AI+ENVQR DLN +EEA GYE+L+ E+ YTQ ++ ++GKSRSH+AN LR+L+L
Sbjct: 119 RTSLEYAILENVQRADLNAIEEASGYERLMGEFKYTQAELADLLGKSRSHLANTLRLLQL 178
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
P +++ + EI+ GHAR L+S DP ++A+ IV++ +SVR+ E L + + + +
Sbjct: 179 PPGIQDRVIASEITAGHARALLSVRDPEAVARRIVAEGLSVREVEALAAAEAPQDDTPRP 238
Query: 239 -IFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
S E + L LE + +G ++++K + + +G+ I+Y + E+ +C LG
Sbjct: 239 GRPRRSAEGDAALRSLEDVLGRALGYSVAVKAKASGEGEIRIRYTSAEERDALCRKLG 296
>gi|154496095|ref|ZP_02034791.1| hypothetical protein BACCAP_00379 [Bacteroides capillosus ATCC
29799]
gi|150274650|gb|EDN01714.1| hypothetical protein BACCAP_00379 [Bacteroides capillosus ATCC
29799]
Length = 297
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 101/271 (37%), Positives = 161/271 (59%), Gaps = 4/271 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ +T + I + P PR F+ E L DL +SI++HG+IQPL VR + +G
Sbjct: 17 DAALKTQEGGSVMLPISQVEPGIKQPRKRFDEESLSDLAESIRTHGLIQPLTVRRLSSGY 76
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERR+RA+K A L+EVP ++ D++ +E+ ++EN+QR+DLNP+EEA GY+ L+
Sbjct: 77 YQIIAGERRWRASKQAGLTEVPAVVIEADDRKVMELGLIENLQREDLNPIEEAGGYKVLV 136
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDP 205
EYG TQ ++ VGKSRS VAN +R+L LP +VR ++ + +S GHAR ++
Sbjct: 137 EEYGLTQEEVAQQVGKSRSAVANAMRLLALPDAVRMLLEEGRLSAGHARAILSVPGGELQ 196
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD-LEKKISSKVGLN 264
LAQ +V + +SVR TE + + E+ ++ + + K D K +S+++G
Sbjct: 197 KRLAQKVVEEDLSVRQTEAMAKRISQAAEEAEEETAPAPDPMKIYRDAAAKDLSARLGRK 256
Query: 265 ISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+SI KG+ ++Y +E L + L +
Sbjct: 257 VSIVQGAKKGKVELEYYGDEDLTALLEALEQ 287
>gi|238018238|ref|ZP_04598664.1| hypothetical protein VEIDISOL_00062 [Veillonella dispar ATCC 17748]
gi|237864709|gb|EEP65999.1| hypothetical protein VEIDISOL_00062 [Veillonella dispar ATCC 17748]
Length = 309
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 81/266 (30%), Positives = 146/266 (54%), Gaps = 4/266 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
+ + I +VPN PR F+ + L L +SIK+ GI QP++VR N Y+I+AG
Sbjct: 33 PEKEIHELPISELVPNADQPRKSFDEDSLATLAESIKNLGIFQPIVVRKQKNK-YQIVAG 91
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR+RAA +A L VPV+++ + + E+A+VEN+QR+ L+P+EEAL Y+ L+ Y T
Sbjct: 92 ERRYRAAIIAGLETVPVVVKKYNTEEMTEVALVENLQREGLDPIEEALAYQGLMDTYKQT 151
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
Q I + +G+SRS++AN++R+LKL SV++ + + ++++G AR L++ +
Sbjct: 152 QEMISARLGRSRSYIANMVRLLKLCDSVQKDLIEGDLTVGQARPLLALRSAAQQMEAAER 211
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK- 273
K ++ + + K K + + L ++ +G ++IK R K
Sbjct: 212 IKEGELSARQVEALVKSMQNKTPKAKGAKPQSTAEVRALMDRLKLSLGSPVNIKFRAGKK 271
Query: 274 --GQFCIKYETNEQLKIICSLLGEND 297
G+ I + + +L+ + + + +
Sbjct: 272 VQGKIEIAFSSEAELERLIAYMDGQE 297
>gi|314922661|gb|EFS86492.1| ParB-like partition protein [Propionibacterium acnes HL001PA1]
Length = 308
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 95/309 (30%), Positives = 165/309 (53%), Gaps = 15/309 (4%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M+ LGRG + S D + IS+ + P
Sbjct: 1 MTVVAKHSGLGRGFGEFFQRTDLDDDDEERVDDASTDGDAINEPVGGSRLELISVDEVSP 60
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N PR F E L +L +SI++ G++QP++V DNG Y+++ GERR+RAA+ A L+ V
Sbjct: 61 NARQPRKTFNEEELTELSESIRAVGVLQPVVVTPADNG-YELVMGERRWRAARKAGLATV 119
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 120 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQI 179
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + EI+ GHAR L++ +P A +V + +SVR TEELV
Sbjct: 180 ANTIRLLKLSAGVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELV 239
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
++ + + K ++ L +++S + + ++ RN +G + NE+L
Sbjct: 240 RQTLDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEEL 299
Query: 287 KIICSLLGE 295
+ + ++ +
Sbjct: 300 ERLINIFSD 308
>gi|302332097|gb|ADL22290.1| chromosome/plasmid partitioning protein ParB [Staphylococcus aureus
subsp. aureus JKD6159]
Length = 278
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 89/274 (32%), Positives = 154/274 (56%), Gaps = 5/274 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
S ++ T+T E I I I NP+ PR F+ L DL SIK +GI+QP+++R
Sbjct: 2 SKSEDQRITKTKDEQIKQIDISDIKQNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRK 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G Y ++ GERRFRA+K+A L V +I+++ ++ +E+A++EN+QR+DLN +EEA
Sbjct: 62 TVQGYYIVV-GERRFRASKIAGLKYVSAVIKDLTDEDMMELAVIENLQREDLNAIEEAES 120
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LV 200
Y++L+++ TQ ++ + KSR ++AN+LR+L LP + +M++ ++ H RT +
Sbjct: 121 YQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPKKIADMVKDGRLTSAHGRTLLAIK 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
L LA+ +V +K SVR E V E N + + + K K++ E+++ +
Sbjct: 181 DEQQMLRLAKRVVKEKWSVRYLENHVNELKNV-SSKSETDKVDITKPKFIKQQERQLREQ 239
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
G + I + + G+ ++E+ E I L
Sbjct: 240 YGAKVDISIKKSVGKISFEFESQEDFLRIIEQLN 273
>gi|167751431|ref|ZP_02423558.1| hypothetical protein EUBSIR_02427 [Eubacterium siraeum DSM 15702]
gi|167655677|gb|EDR99806.1| hypothetical protein EUBSIR_02427 [Eubacterium siraeum DSM 15702]
gi|291558327|emb|CBL35444.1| chromosome segregation DNA-binding protein [Eubacterium siraeum
V10Sc8a]
Length = 281
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 92/268 (34%), Positives = 159/268 (59%), Gaps = 4/268 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ + E + + I PN PR F+ L L SI+ +G+IQPL+VR++ +G
Sbjct: 17 DNSFDEDDEGVSTLKLTDIEPNKSQPRKNFDITALNTLADSIRQNGVIQPLLVRSMPDGT 76
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+I+AGERR+RAAKMA L+EVPV+++ + + + +IA++EN+QR++LNP+EEA GY++L+
Sbjct: 77 YQIVAGERRWRAAKMAGLTEVPVLVKELTDLQAQQIALIENLQRENLNPIEEANGYKELM 136
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
++G TQ ++ +VGK+RS +AN LR+L LP + EM+ E+S GH + L+ S+
Sbjct: 137 DKFGMTQEEVARVVGKARSSIANSLRLLNLPPIIAEMVSNNELSTGHCKVLLGVSET--- 193
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK 268
+ +V + V+E + + K + ++K+ + T+ E ++ + N+SI
Sbjct: 194 -KDMVELAHKAAGKDVSVREMERMVKALDKKEKPEKKKDTFYTEAEISLAKALETNVSIV 252
Query: 269 HRNNKGQFCIKYETNEQLKIICSLLGEN 296
K I++ T+E L I + L +
Sbjct: 253 PGKKKSTIQIEFYTDEDLTDIVNRLANS 280
>gi|312864111|ref|ZP_07724346.1| stage 0 sporulation protein J [Streptococcus vestibularis F0396]
gi|322515793|ref|ZP_08068738.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
vestibularis ATCC 49124]
gi|311100343|gb|EFQ58551.1| stage 0 sporulation protein J [Streptococcus vestibularis F0396]
gi|322125755|gb|EFX97073.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
vestibularis ATCC 49124]
Length = 255
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 86/259 (33%), Positives = 139/259 (53%), Gaps = 7/259 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E + I I PNP PR F E L +L QSI +G+IQP+IVR D Y++IAGE
Sbjct: 2 SEQLKTLPISEIYPNPFQPRLEFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA K ++E+P +++ V ++ S + AI+EN+QR +LNP+EEA Y LI E Y+
Sbjct: 62 RRLRACKRLGMTEIPAVVKKVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELAYSH 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ +GKSR +++N LR+L+LP ++ I +S GHAR L++ D +
Sbjct: 122 EELAKAMGKSRPYISNTLRLLQLPREIQTSIENGSLSQGHARALLAIEDSRKQLTIFQQV 181
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKG 274
L ++ + +K+ ++ D EK++ +GL ++++ H+ + G
Sbjct: 182 VAERWSVRTLEKKLQEL------PRKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKTHSG 235
Query: 275 QFCIKYETNEQLKIICSLL 293
I + T E I + L
Sbjct: 236 TIQIHFSTEEDFNRIINKL 254
>gi|260221684|emb|CBA30495.1| Probable chromosome-partitioning protein parB [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 319
Score = 119 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 27/313 (8%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LG GL AL+G + + + +V + PR + L
Sbjct: 4 KKPKGLGMGLEALLG-PKVVDAPAADANAAPQTTPSTLLLADMVAGVYQPRTRMDEGALY 62
Query: 65 DLCQSIKSHGIIQP-------------LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPV 111
+L +SIK+ GI+QP I +Y+IIAGERRFRAAK+A L+EVPV
Sbjct: 63 ELAESIKAQGIMQPILVRKLDEADAAKHIGDGRKRAIYEIIAGERRFRAAKLAGLTEVPV 122
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
++R+V N+++ +A++EN+QR+DLNPLEEA G ++LI E+G T VG+SRS +N
Sbjct: 123 LVRDVPNEAAAAMALIENIQREDLNPLEEAQGLQRLIREFGLTHETAAQAVGRSRSAASN 182
Query: 172 ILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQ 229
+LR+L L V+ M+ +I +GHAR L+ ++ A I +KKMSVR+ E LV++
Sbjct: 183 LLRLLNLADPVQTMLMAGDIDMGHARALLALDRGTQITAANQIATKKMSVREAESLVKKL 242
Query: 230 DNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN---------KGQFCIKY 280
+ K + ++EK + + +E+++S + + + + G+ I++
Sbjct: 243 SAEF--SLKPQKPAKEKSRDIKRVEEELSDLLMAQVDVHIKKRVKRHGRFEEMGEVVIQF 300
Query: 281 ETNEQLKIICSLL 293
+ ++L + L
Sbjct: 301 GSLDELNGLIDRL 313
>gi|258593687|emb|CBE70028.1| chromosome partitioning protein [NC10 bacterium 'Dutch sediment']
Length = 280
Score = 119 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 83/293 (28%), Positives = 135/293 (46%), Gaps = 17/293 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +R LGRGL LI + P I + I PR
Sbjct: 1 MA---QRRALGRGLETLIPAGD-------------PSGVLQIRVEEIALGSSQPRRSMND 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L SIK+HG++ I+ + G +++AGERR RAA+MA L VP +++ + +
Sbjct: 45 SKLNELASSIKAHGVL-LPILLRREGGRLEVVAGERRLRAARMAGLDTVPALVKELSSSQ 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+A++EN+QR+DLNP+E+A Y +L E+G TQ ++ VG+ RS VAN LR+LKLP
Sbjct: 104 ALEVALIENLQREDLNPIEQAEAYLRLQDEFGLTQEEVARRVGRDRSSVANALRLLKLPK 163
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
++ + + +S GHAR L+ + +V K+
Sbjct: 164 PIQADLVEGVLSEGHARALLGLDRTVDQIKVRDEAIRRGLSVRTTEVLVRRLKQTDSAPQ 223
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
E + E + +G + I + G +++ + L I +
Sbjct: 224 RRQTASEPAILAAEDALRQALGTKVQICRKGKGGTIEVEFYSTGDLDRIYERI 276
>gi|258655503|ref|YP_003204659.1| parB-like partition protein [Nakamurella multipartita DSM 44233]
gi|258558728|gb|ACV81670.1| parB-like partition protein [Nakamurella multipartita DSM 44233]
Length = 377
Score = 119 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 89/278 (32%), Positives = 152/278 (54%), Gaps = 4/278 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+V +S P + I + I N NPR F+ + L +L SI+ G++QP
Sbjct: 85 PDVERSTTPPTVRATPGGPRYAEIRVERIQRNARNPRTVFDEDALAELTHSIREFGLLQP 144
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ G Y+++ GERR++AA+ A L +P I+R + L A++EN+ R +LNPL
Sbjct: 145 IVVRELEPGSYELVMGERRWQAAQRAGLPTIPAIVRRTQDAEMLRDALLENIHRANLNPL 204
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR- 197
EEA Y+QL+ E+ TQ ++ S +G+SR ++N +R+LKLP V+ + +S GHAR
Sbjct: 205 EEAAAYQQLLQEFDVTQEELASRLGRSRPVISNTIRLLKLPIPVQRRVAAGVLSAGHARA 264
Query: 198 --TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+L D LA IV++ +SVR TEE V + R+++ R L +L
Sbjct: 265 LLSLPDPDDQEQLAARIVAEGLSVRGTEEAVTLLLGRTTSRRRVTAPKRVI-PGLENLAG 323
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+S + ++ KG+ +++ T E L+ + +++
Sbjct: 324 ALSDAFDTRVRLEIGRTKGRIVVEFATQEDLRRLITVM 361
>gi|196018457|ref|XP_002118810.1| hypothetical protein TRIADDRAFT_62816 [Trichoplax adhaerens]
gi|190578149|gb|EDV18705.1| hypothetical protein TRIADDRAFT_62816 [Trichoplax adhaerens]
Length = 285
Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 106/296 (35%), Positives = 179/296 (60%), Gaps = 15/296 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N K LG+GL++LI I++ T ISI I+ N PR F +
Sbjct: 1 MTENEFK-ALGKGLSSLIPNKLDFINNQSGLT-------VNISIDKIIANNSQPRKSFNN 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
EG+ +L SIK +GI+QP++V+ I ++IIAGERR+RAAK+A+L +P II++ +K
Sbjct: 53 EGIIELSNSIKLYGILQPILVKKISEDNFQIIAGERRWRAAKIANLKFIPAIIKDTIDKE 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++EI+++EN+QR+DLNPLEEA Y+ L+ E GYTQ ++ + +GKSRS++AN++R+L L
Sbjct: 113 NVEISLIENIQREDLNPLEEANIYKILLDEKGYTQENLAAKIGKSRSYIANLVRLLNLSE 172
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+++I + ++S HAR L++ +P L ++I ++VR+TE +++ N
Sbjct: 173 KFKKLIHENKLSASHARLLLNHKNPDDLIKIIQKYNLNVRETENILKNNKN-------PR 225
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ K+ + +LE+KI + LN I + + IK+ ++ + +LL +N
Sbjct: 226 INKKVKDAEVINLERKIKKALNLNAKINLSDKENSIVIKFNNMDEFDYLVTLLCQN 281
>gi|210634761|ref|ZP_03298289.1| hypothetical protein COLSTE_02216 [Collinsella stercoris DSM 13279]
gi|210158701|gb|EEA89672.1| hypothetical protein COLSTE_02216 [Collinsella stercoris DSM 13279]
Length = 274
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 91/272 (33%), Positives = 152/272 (55%), Gaps = 4/272 (1%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+ + +SI IVPNP+ PR +F LE+L +SI+ +G++QPL+VR D+
Sbjct: 3 EAQSETGFNQPDTEMSIEDIVPNPNQPRTHFNESALEELSESIRENGVLQPLLVRKHDSK 62
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y+IIAGERR++A+K+A L++VPVII++VD++ LE+A++EN+QR DLNP+EEA GY QL
Sbjct: 63 -YEIIAGERRYQASKIAGLTKVPVIIKDVDDQKMLELALIENLQRSDLNPIEEAKGYRQL 121
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I G TQ + V KSRS + N LR+L LP V++M+ + +++ GHAR +++
Sbjct: 122 IKASGMTQEALSKAVSKSRSTITNSLRLLDLPEQVQQMMYEGKLTAGHARAILAVP--FE 179
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY-LTDLEKKISSKVGLNIS 266
A++ +++K+ E + R + + N+
Sbjct: 180 EARIKLAEKVVAEGLSVRATENLAPLFSVGETPRAPRPVTPQSYKKAARVLRQLFNTNVK 239
Query: 267 IKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
++ K + I+++ + L+ I + E D
Sbjct: 240 VRSTRGKNKIEIEFKDEDDLQRILMSMVEADE 271
>gi|315660041|ref|ZP_07912899.1| chromosome partitioning protein SpoOJ [Staphylococcus lugdunensis
M23590]
gi|315494942|gb|EFU83279.1| chromosome partitioning protein SpoOJ [Staphylococcus lugdunensis
M23590]
Length = 275
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 87/273 (31%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+I++ + E I+I I+PNP+ PR F++E L DL +SIK HGI+QP+++R
Sbjct: 2 AIENDHRLQINEDEQIRWITIEEIMPNPYQPRKNFDAERLNDLAESIKIHGILQPIVLRQ 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G Y ++ GERR+RA+++A L+++P II+ + + +E+AI+EN+QR+DLN +EEA
Sbjct: 62 TVQGYYIVV-GERRYRASQLAGLTKLPSIIKELSDADMMELAIIENLQREDLNAIEEAES 120
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LV 200
Y++L+ + TQ ++ +GKSR ++AN+LR+L LP S+++ I++ E+S H RT +
Sbjct: 121 YQRLMDDLQLTQQEVAHRLGKSRPYIANMLRLLHLPPSLKDSIQRGELSGAHGRTLLGIK 180
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
+ + + + SVR E+ V + K+ + K K++ E+ + +
Sbjct: 181 DKQRMIQVGRKAFKESWSVRYLEKYVNNIQEGSQPYPKVTKE-PLKPKFIQKQERLLREQ 239
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
G + I + G ++++ E+ + + LL
Sbjct: 240 YGAKVDISTKKQVGAITFEFKSKEEFERLIKLL 272
>gi|282853028|ref|ZP_06262365.1| ParB-like protein [Propionibacterium acnes J139]
gi|282582481|gb|EFB87861.1| ParB-like protein [Propionibacterium acnes J139]
Length = 306
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 96/309 (31%), Positives = 167/309 (54%), Gaps = 17/309 (5%)
Query: 1 MSNNYSKRRLGRGLAALI-----------GEVNQSIDSPEKKTETIPESQDCISIHSIVP 49
M+ +S LGRG + S D + IS+ + P
Sbjct: 1 MAAKHS--GLGRGFGEFFQRTDLDDDDEERVDDASTDGDAINEPVGGSRLELISVDEVSP 58
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
N PR F E L +L +SI++ G++QP++V DNG Y+++ GERR+RAA+ A L+ V
Sbjct: 59 NARQPRKTFNEEELTELSESIRAVGVLQPVVVTPADNG-YELVMGERRWRAARKAGLATV 117
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I+R ++ L A++EN+ R LNPLEEA YEQ+++++G TQ+++ + +SRS +
Sbjct: 118 PAIVRTTASEDMLRDALLENLHRVQLNPLEEAAAYEQMLNDFGCTQDELSEKIQRSRSQI 177
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELV 226
AN +R+LKL + V++ + EI+ GHAR L++ +P A +V + +SVR TEELV
Sbjct: 178 ANTIRLLKLSAGVQKRLLDGEITAGHARCLLAIDNPEVQVGTANRVVDEGLSVRATEELV 237
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQL 286
++ + + K ++ L +++S + + ++ RN +G + NE+L
Sbjct: 238 RQTLDDTTEVKPHQRKKPGRDTEAVKLGEQLSQRFRTAVKVRRRNGRGTITFPFNDNEEL 297
Query: 287 KIICSLLGE 295
+ + ++ +
Sbjct: 298 ERLINIFSD 306
>gi|323141498|ref|ZP_08076386.1| putative stage 0 sporulation protein J [Phascolarctobacterium sp.
YIT 12067]
gi|322414014|gb|EFY04845.1| putative stage 0 sporulation protein J [Phascolarctobacterium sp.
YIT 12067]
Length = 330
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 100/306 (32%), Positives = 162/306 (52%), Gaps = 29/306 (9%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
A+ GE + +K + + + I +I NP+ PR F+ E L++L SIK G+
Sbjct: 13 AIFGE---NTSPAVEKVQEPASAAQELLIKNIAANPYQPRCNFDEEKLQELAASIKEFGV 69
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
+QP++VR Y+++AGERR RAA +A L++VP I+++ D+ +EIA++EN+QR DL
Sbjct: 70 VQPVVVRKKGRS-YELVAGERRLRAAGLAGLTKVPAIVKDYDDAKMMEIALIENIQRHDL 128
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
NP+EEA G +L+ E+ TQ VG+SRS V NILR+L LP V++ I +++G
Sbjct: 129 NPIEEAQGLRRLMQEFKLTQEQTAEKVGRSRSAVTNILRLLNLPEQVQKQIINGVLTMGQ 188
Query: 196 ARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQ-----------------EQDNKKEK 235
A+ L+ P + A+ I++ S R TEE+V+ E NK K
Sbjct: 189 AKQLLGLPKPEQMCEVAEAIIANGWSSRMTEEVVRKLKEGKKLKIVRELIEEEAKNKDNK 248
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISI-----KHRNNKGQFCIKYETNEQLKIIC 290
KK E + + D E+++ +G + + + G I+Y + E L+ I
Sbjct: 249 EKKPKREPTENDIFCHDFEQRLVEFLGTKVKVVPKLDEQGRQGGTIHIEYYSAEDLERIY 308
Query: 291 SLLGEN 296
+L +
Sbjct: 309 EVLQQG 314
>gi|322375215|ref|ZP_08049729.1| spspoJ protein [Streptococcus sp. C300]
gi|321280715|gb|EFX57754.1| spspoJ protein [Streptococcus sp. C300]
Length = 252
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 86/259 (33%), Positives = 146/259 (56%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+++ L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISISEIQKNPYQPRKEFDADKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RAA +A L+ +P I++++ ++ + +I+EN+QR++L+P+EEA YE L+ + G+T
Sbjct: 62 RYRAALLAGLTSIPAIVKHLSDQEMMIQSIIENLQRENLSPVEEARAYESLVEK-GFTHT 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
DI +GKSR H+ N +R+L LP + + +IS HAR+LV + K
Sbjct: 121 DIADKMGKSRPHITNFIRLLSLPEHILSEVENRKISQAHARSLVGLDKEQQDYFFQLIKN 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + +K ++ + ++ D E K+ +GLN+ IK + + G+
Sbjct: 181 EDISVRKLEALL-------TEKKHRKQKKSDSFIKDEEDKLKKLLGLNVEIKLSKKDTGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + + E+ I + L
Sbjct: 234 IIISFSSQEEYDRIINSLK 252
>gi|330685073|gb|EGG96740.1| stage 0 sporulation protein J [Staphylococcus epidermidis VCU121]
Length = 279
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 97/268 (36%), Positives = 156/268 (58%), Gaps = 4/268 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E +S+ I NP+ PR F+ L DL QSIK HGI+QP++VR G Y ++
Sbjct: 12 NKDEQVHSVSLDLIKANPYQPRKTFDEYRLNDLAQSIKQHGILQPIVVRKTVQGYYIVV- 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRA+K A L+E+P II+ + ++ +E+AI+EN+QR+DLN +EEA Y++L+ +
Sbjct: 71 GERRFRASKKAGLTEIPAIIKELSDEDMMELAIIENLQREDLNAIEEAESYKKLMEDLNI 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQ 210
TQ ++ + KSR ++AN+LR+LKLPS V +M+R E+S H RTL S S+A+
Sbjct: 131 TQQEVAERLSKSRPYIANMLRLLKLPSDVAKMVRDGELSGAHGRTLLGLKSPQKMKSIAK 190
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
V + SVR E + + K + + E + K K++ E+++ + G + I
Sbjct: 191 KAVKESWSVRYLESYINDYLEKNAPKTSVNEQTLNKPKFIQKQERQLKEQYGSKVDISTH 250
Query: 271 NNKGQFCIKYETNEQLKIICSLLGENDF 298
N G+ ++++ E+ K + L +N
Sbjct: 251 KNIGKIAFEFKSEEEFKSLIKKLNQNYE 278
>gi|291276661|ref|YP_003516433.1| ParB family protein [Helicobacter mustelae 12198]
gi|290963855|emb|CBG39691.1| parB family protein [Helicobacter mustelae 12198]
Length = 293
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 88/295 (29%), Positives = 152/295 (51%), Gaps = 11/295 (3%)
Query: 5 YSKR--RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+K+ LGRGL A++G+V ++ E +SI +I PNP PR F+ E
Sbjct: 1 MAKKQLALGRGLDAILGDVERAYS---NHLSDHSERIIDLSIDAIAPNPFQPRKVFQEES 57
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
+++L +SI HG++QP+IV D Y +IAGERR RA K+A + + I+ +D
Sbjct: 58 IKELSESIIEHGLLQPIIVCQNDKKDYILIAGERRLRACKLAGKNSIRAIVAEIDLARLG 117
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR++LNP++ A Y+ LISEYG T + + KSR+ V N LR+L+L V
Sbjct: 118 ELALIENIQRENLNPIDLAKSYQTLISEYGITHEALAQKIKKSRTQVTNTLRLLQLLPEV 177
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ + +I+ GHA+ LV D + + ++ + N K+ ++
Sbjct: 178 QQALIDGKITQGHAKMLVGLEDGDQELLFHSVEGQKLSVSDTE-KMVQNFKKNKRGKGMS 236
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
K L L++ + + L + I + I ++ Q++ + L ++
Sbjct: 237 DSSKPLQLQKLQEILGE-MDLRVKISRQ----SLIIDFQNENQVEFLIRKLQSSN 286
>gi|34556932|ref|NP_906747.1| stage 0 sporulation protein J [Wolinella succinogenes DSM 1740]
gi|34482647|emb|CAE09647.1| STAGE 0 SPORULATION PROTEIN J [Wolinella succinogenes]
Length = 297
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 99/305 (32%), Positives = 162/305 (53%), Gaps = 15/305 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M LGRGL A++GEV ++ E + + IHSI PNP PR +F++
Sbjct: 1 MMAAKKSLALGRGLGAILGEVEKAY---ENDLNDNSDLVVELDIHSIKPNPFQPRKHFDT 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE+L SIK HG++QP++V A D Y +IAGERR RA+K+A S + II ++ +
Sbjct: 58 TALEELASSIKEHGLLQPILVFADDEEGYSLIAGERRLRASKLAGFSTIKAIIVDIKTER 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNP++ A Y++LI +YG T ++ + KSR+ + N LR+L L
Sbjct: 118 LREVALIENIQREDLNPIDLAQSYKELIEDYGITHEELAKKISKSRTQITNTLRLLTLSL 177
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+E + + +I+ GHA+ LV ++ + I+ +++SVR+TE L++
Sbjct: 178 EVQEQLLEGKITQGHAKVLVGLASEEQKVALDSIIGQRLSVRETESLIKNLKETPRPSSH 237
Query: 239 IFEGSREK-----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ L +L + K G S+K + + +E E++K + L
Sbjct: 238 PSRTPSNPLVSQSSQSLLELVMLMKQK-GFKASLKGT----KIVLDFEGEEEVKRLIKSL 292
Query: 294 GENDF 298
F
Sbjct: 293 SSLSF 297
>gi|121592467|ref|YP_984363.1| chromosome segregation DNA-binding protein [Acidovorax sp. JS42]
gi|120604547|gb|ABM40287.1| chromosome segregation DNA-binding protein [Acidovorax sp. JS42]
Length = 331
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 101/327 (30%), Positives = 171/327 (52%), Gaps = 40/327 (12%)
Query: 5 YSKRRLGRGLAALIGE-VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+ LGRGL AL+G V + +++ +VP + PR + L
Sbjct: 4 KKPKGLGRGLEALLGPKVADKAPAGANAAGAADGPVSTLALDRLVPGIYQPRTRMDEGAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGL--------------------------YKIIAGERR 97
+L +SIK+ GI+QP++VR +D+ Y+IIAGERR
Sbjct: 64 YELAESIKAQGIMQPILVRRLDDEQAQQRRQERASQGASAAMGALSASGPLYEIIAGERR 123
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
FRA+++A L+EVPV++R+V N+++ +A++EN+QR+DLNPLEEA G ++LI E+G T
Sbjct: 124 FRASRLAGLAEVPVLVRDVPNEAAAAMALIENIQREDLNPLEEAQGLQRLIREFGLTHEQ 183
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSK 215
VG+SRS +N+LR+L L V+ M+ +I +GHAR L+S + I +K
Sbjct: 184 AAQAVGRSRSAASNLLRLLNLAEPVQTMLMAGDIDMGHARALLSLERAAQITAGNQIAAK 243
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--- 272
K+SVR+ E LV++ + + ++K + L +E+++S + + ++ +
Sbjct: 244 KLSVREAESLVKKLGAEF--ALTPQKPKKDKSRDLKRVEEELSDLLMAEVEVRVKKRVKR 301
Query: 273 ------KGQFCIKYETNEQLKIICSLL 293
G+ I++ + E L + L
Sbjct: 302 GSRVEEMGELAIQFGSLEALNGLIERL 328
>gi|258646391|ref|ZP_05733860.1| spoOJ protein [Dialister invisus DSM 15470]
gi|260403793|gb|EEW97340.1| spoOJ protein [Dialister invisus DSM 15470]
Length = 284
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 96/266 (36%), Positives = 168/266 (63%), Gaps = 7/266 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
++ + ISI +VPN PR FE E L L +SIK HG++QP+IVR D+G Y++IAGE
Sbjct: 22 EKNTESISISLVVPNEWQPRREFEPESLNALAESIKEHGVVQPVIVRKKDSG-YELIAGE 80
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAA++A L E+P ++R+ ++ + EIA++EN+QR+DLNPLEE L Y+++ISEY +TQ
Sbjct: 81 RRLRAAQLAGLVEIPALVRDYSDQETAEIALIENLQREDLNPLEEGLAYQRMISEYHFTQ 140
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+ +++GKSRS+V N++R+L+L V+ ++ + +++ G AR L+ P + +++
Sbjct: 141 EKMANLIGKSRSYVTNMMRLLELSEEVKSLLLERKLTAGQARPLLGLETPAEQ--IALAR 198
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-- 273
++ D E+ ++EK + + + + + YL LE+ + + VG + IK K
Sbjct: 199 RIVEEDLSARRIEEILRREKDGQKRKPADKADAYLRALEEDLVNAVGSRVKIKVGKGKNS 258
Query: 274 --GQFCIKYETNEQLKIICSLLGEND 297
G I ++++++ + I LL + +
Sbjct: 259 HRGTISISFKSDKEFERITKLLKQGE 284
>gi|183602660|ref|ZP_02964024.1| probable chromosome partitioning protein [Bifidobacterium animalis
subsp. lactis HN019]
gi|219684021|ref|YP_002470404.1| ParB-like partition proteins [Bifidobacterium animalis subsp.
lactis AD011]
gi|241191626|ref|YP_002969020.1| chromosome partitioning protein [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241197031|ref|YP_002970586.1| chromosome partitioning protein [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183218078|gb|EDT88725.1| probable chromosome partitioning protein [Bifidobacterium animalis
subsp. lactis HN019]
gi|219621671|gb|ACL29828.1| ParB-like partition proteins [Bifidobacterium animalis subsp.
lactis AD011]
gi|240250018|gb|ACS46958.1| chromosome partitioning protein [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251585|gb|ACS48524.1| chromosome partitioning protein [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289177761|gb|ADC85007.1| ParB [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794618|gb|ADG34153.1| chromosome partitioning protein [Bifidobacterium animalis subsp.
lactis V9]
Length = 462
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 94/307 (30%), Positives = 161/307 (52%), Gaps = 33/307 (10%)
Query: 18 IGEVNQSIDSPEKKTETIPES---QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
+ + + + + E P + ++ + I PN + PR F E L++L SIK G
Sbjct: 159 LADTAKPKEEESEAPELKPVAGGYLVELNPNQIGPNLYQPRTTFNEEELQELADSIKEVG 218
Query: 75 IIQPLIVRAIDNGL------------------------YKIIAGERRFRAAKMASLSEVP 110
++QP++VR Y++I GERR+RA+++A L+E+P
Sbjct: 219 VLQPIVVRKRPQEQIDEAKRRQSEEHAADRFAGRMDSEYELIMGERRWRASQLAGLTEIP 278
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
VI++ ++ L A++EN+ R LNPLEEA Y+Q+I E+G TQ + V KSR +A
Sbjct: 279 VIVKTTSDEYMLRDALLENLHRVALNPLEEAAAYQQMIDEFGLTQKQLAQSVSKSRPQIA 338
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQ 227
N LR++ LP+SV++ + ++S GHAR L+ + + LAQ I+ + +SVR EE+V
Sbjct: 339 NTLRLMNLPASVQKKVAAGQLSSGHARALLGLDTDEEMEQLAQRIIDEGLSVRSVEEIVS 398
Query: 228 EQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLK 287
NK+ ++ K + + ++ +S + +SIK G+ I + + E+++
Sbjct: 399 MSANKETRKPKTNRNNPWAGSPI---QQHLSERFATKVSIKGSEQHGRIEIVFSSPEEMQ 455
Query: 288 IICSLLG 294
I LLG
Sbjct: 456 RIIDLLG 462
Score = 37.0 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPE 37
M+ SK RLGRGL AL + + + PE
Sbjct: 1 MA---SKSRLGRGLGALFPTLPDEQEFQHEAQAAKPE 34
>gi|225028350|ref|ZP_03717542.1| hypothetical protein EUBHAL_02623 [Eubacterium hallii DSM 3353]
gi|224954396|gb|EEG35605.1| hypothetical protein EUBHAL_02623 [Eubacterium hallii DSM 3353]
Length = 319
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 118/297 (39%), Positives = 182/297 (61%), Gaps = 9/297 (3%)
Query: 7 KRRLGRGLAALI----GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
++ LGRGL LI G +S + ++ E +SIH + PN + PR F+ +
Sbjct: 21 RKGLGRGLDLLIPKDEGMPKKSTEKNKENKEPKENQVLTLSIHDVEPNRNQPRKQFDEDA 80
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
+E+L SIK +G+IQPLIV+ D Y+IIAGERR+RA K A L EVPVII+N D K +L
Sbjct: 81 IEELADSIKQYGVIQPLIVQKKD-KYYEIIAGERRWRACKKAGLKEVPVIIKNYDEKETL 139
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
+I+++EN+QR+DLNP+EEA YEQL + YG Q++I + V KSR+ + NI+R+LKL V
Sbjct: 140 KISLIENLQREDLNPIEEAKAYEQLYNTYGLKQDEIAASVSKSRTAITNIMRLLKLDERV 199
Query: 183 REMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ M+ + IS GH RTL+ LA+ I+ + +SVR+ E+LV+ K+ +K +
Sbjct: 200 QNMVIENLISSGHGRTLLSIDDGDMQYQLAEKILDENLSVREAEKLVKCILEHKDNKKNV 259
Query: 240 FEGSREKEKYLTDLEKKISSKVGL-NISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
E S +++ + E K+ +G + +NNKG+ I+Y + ++L+ I L+
Sbjct: 260 EEESSQEKSMIDFFENKMKDILGSKVVIKNKKNNKGKIEIEYYSKDELERIIDLIQS 316
>gi|306826186|ref|ZP_07459521.1| ParB/SpoJ family partitioning protein [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304431662|gb|EFM34643.1| ParB/SpoJ family partitioning protein [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 252
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 86/259 (33%), Positives = 149/259 (57%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISISEIQKNPYQPRKEFDVEKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L+ +P +++++ ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLTSIPAVVKHLSDQEMMVQSIIENLQRENLNPVEEARAYESLVEK-GFTHT 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR ++ N +R+L LP + + + +IS HAR+LV + K
Sbjct: 121 EIADKMGKSRPYITNFIRLLSLPEYILDEVENGKISQAHARSLVGLDKEQQDYFFQLIKN 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + + K +K+KK + ++ D E K+ +GL++ IK + + G+
Sbjct: 181 EDISVRKLEALLTEKKHKKQKKS-------DSFIRDEEDKLKKLLGLSVEIKLSKKDTGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + + E+ I + L
Sbjct: 234 IIISFSSQEEYDRIINSLK 252
>gi|115374096|ref|ZP_01461384.1| chromosome partitioning protein Spo0J [Stigmatella aurantiaca
DW4/3-1]
gi|310825564|ref|YP_003957922.1| ParB family protein [Stigmatella aurantiaca DW4/3-1]
gi|115368872|gb|EAU67819.1| chromosome partitioning protein Spo0J [Stigmatella aurantiaca
DW4/3-1]
gi|309398636|gb|ADO76095.1| ParB family protein [Stigmatella aurantiaca DW4/3-1]
Length = 294
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 104/285 (36%), Positives = 164/285 (57%), Gaps = 12/285 (4%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ + KR LGRGL+ + Q+ +P E + I SI + PR +F+
Sbjct: 4 AGDKHKRALGRGLS---ALIPQAAPAPAASPEAAKAGVLKLPIESIHRDTAQPRRHFDEA 60
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L +L +SIK+ G++QP++VR D YK+IAGERR+RAA+ A L E+P I+R V +
Sbjct: 61 KLAELTESIKAQGLLQPVLVRK-DGQGYKLIAGERRWRAAQAAGLHELPAIVREVTEGQA 119
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
E+A+VEN+QR DLNP+EEA GY +L+ E+ TQ + VGK RS VAN LR+L LP
Sbjct: 120 FELALVENLQRSDLNPMEEAEGYHRLVEEFKLTQEQVSQRVGKERSTVANALRLLGLPDD 179
Query: 182 VREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ ++ + +S+GHAR + + +LA +V +K+SVRDTE+LVQ++ +KK
Sbjct: 180 VKALVAEGALSMGHARALLGVPRLPELQALATRVVEEKLSVRDTEKLVQQK----RPQKK 235
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYET 282
++ + L +++ +G + + + KG + Y +
Sbjct: 236 DTGKPSKQSPQVKALVEELQRLLGTKVRLAEKGQGKGTLEVDYFS 280
>gi|294102830|ref|YP_003554688.1| parB-like partition protein [Aminobacterium colombiense DSM 12261]
gi|293617810|gb|ADE57964.1| parB-like partition protein [Aminobacterium colombiense DSM 12261]
Length = 296
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 91/293 (31%), Positives = 151/293 (51%), Gaps = 7/293 (2%)
Query: 4 NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+ LGRGL ALI E ++ + + + PN + PR ++ E L
Sbjct: 3 AAKGKALGRGLGALIPGAGDL------AGEKGKQNATSLPLSLLQPNINQPRKTWDEEKL 56
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
+ L SIK+HG+IQPL+VR I +G Y+I+AGERR+RAA+MA L+EVPV K E
Sbjct: 57 QALADSIKTHGVIQPLVVRKIKDG-YQIVAGERRWRAAQMAGLNEVPVFFFEGTEKDVQE 115
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
I+++EN+QR+DL+PLE A +L+ + TQ ++ +G SR+ + N LR+L+LP +
Sbjct: 116 ISLIENIQREDLSPLEVARAIRELLQTFELTQEELAGRIGWSRTLLTNKLRLLQLPERIH 175
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+MI I+ GH R L++ + + + +L + K +
Sbjct: 176 QMIENGSITEGHGRALLALETENQMEALALRVMREEMSVRKLEKLIQEIKRTDFIQNKTP 235
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
K Y + + ++ + G+ I + K + I T EQ++ + +LL ++
Sbjct: 236 YSKISYSSPFMQSMAERHGIKIKVTGNGVKKKLSIDGLTIEQIERLETLLEDS 288
>gi|222109275|ref|YP_002551539.1| parb-like partition protein [Acidovorax ebreus TPSY]
gi|221728719|gb|ACM31539.1| parB-like partition protein [Acidovorax ebreus TPSY]
Length = 331
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 101/327 (30%), Positives = 171/327 (52%), Gaps = 40/327 (12%)
Query: 5 YSKRRLGRGLAALIGE-VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+ LGRGL AL+G V + +++ +VP + PR + L
Sbjct: 4 KKPKGLGRGLEALLGPKVADKAPAGANAAGAADGPVSTLALDRLVPGIYQPRTRMDEGAL 63
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGL--------------------------YKIIAGERR 97
+L +SIK+ GI+QP++VR +D+ Y+IIAGERR
Sbjct: 64 YELAESIKAQGIMQPILVRRLDDEQAQQRRQERASQGASAAMGALSASGPLYEIIAGERR 123
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
FRA+++A L+EVPV++R+V N+++ +A++EN+QR+DLNPLEEA G ++LI E+G T
Sbjct: 124 FRASRLAGLAEVPVLVRDVPNEAAAAMALIENIQREDLNPLEEAQGLQRLIREFGLTHEL 183
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSK 215
VG+SRS +N+LR+L L V+ M+ +I +GHAR L+S + I +K
Sbjct: 184 AAQAVGRSRSAASNLLRLLNLAEPVQTMLMAGDIDMGHARALLSLERAAQITAGNQIAAK 243
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--- 272
K+SVR+ E LV++ + + ++K + L +E+++S + + ++ +
Sbjct: 244 KLSVREAESLVKKLGAEF--ALTPQKPKKDKSRDLKRVEEELSDLLMAEVEVRVKKRVKR 301
Query: 273 ------KGQFCIKYETNEQLKIICSLL 293
G+ I++ + E L + L
Sbjct: 302 GSRVEEMGELAIQFGSLEALNGLIERL 328
>gi|322373979|ref|ZP_08048513.1| partitioning protein, ParB family [Streptococcus sp. C150]
gi|321276945|gb|EFX54016.1| partitioning protein, ParB family [Streptococcus sp. C150]
Length = 255
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 84/259 (32%), Positives = 142/259 (54%), Gaps = 7/259 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E + I I PNP PR F + L +L QSI +G+IQP+IVR D Y++IAGE
Sbjct: 2 SEQLKTLPIQEIYPNPFQPRLEFSDDELTELSQSIAENGLIQPIIVRKSDIIGYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA K ++E+P +++ + ++ S + AI+EN+QR +LNP+EEA Y LISE Y+
Sbjct: 62 RRLRACKRLGMTEIPAVVKEITDQDSRKQAIIENLQRSNLNPIEEAKAYHNLISELSYSH 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ +GKSR +++N LR+L+LP ++ I ++S GHAR L++ +P +
Sbjct: 122 EELAKAMGKSRPYISNALRLLQLPREIQLSIEHGKLSQGHARALLAIQNPEKQLNIFHKV 181
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKG 274
L + + +K+ ++ D EK++ +GL +++ H+N+ G
Sbjct: 182 LTEKWSVRTLEKRLQEL------PRKQKLKKDIHIKDKEKELEKSLGLPVTLSYHKNHSG 235
Query: 275 QFCIKYETNEQLKIICSLL 293
I++ + E + + L
Sbjct: 236 TIKIQFSSEEDFNRLINKL 254
>gi|291455683|ref|ZP_06595073.1| stage 0 sporulation protein J [Bifidobacterium breve DSM 20213]
gi|291382611|gb|EFE90129.1| stage 0 sporulation protein J [Bifidobacterium breve DSM 20213]
Length = 421
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 29/305 (9%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ ++PE+ +S+ I PN H PR F+ + L +L SIK G++QP+
Sbjct: 109 DKANKQEAPEELKPVEGGYLAELSLQEIGPNAHQPRTIFDEDELNELAASIKEVGVLQPI 168
Query: 80 IVRAIDNGL-------------------------YKIIAGERRFRAAKMASLSEVPVIIR 114
+VR + Y++I GERR+RA+++A L+ +P I++
Sbjct: 169 VVRRRPSEQIAEAKQAQPGEQSSTNPFTGHLDSPYELIMGERRWRASQLAGLTTIPAIVK 228
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+ L A++EN+ R LNPLEEA Y+Q+I E+G TQ + + KSR +AN LR
Sbjct: 229 TTTDDDMLRDALLENLHRVALNPLEEAAAYQQMIKEFGLTQAQLSKSISKSRPQIANTLR 288
Query: 175 ILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
+L LP++V++ + +S GHAR L LA I+++ +SVR TEE+V
Sbjct: 289 LLNLPATVQKKVAAGVLSSGHARALLGLSDPEAMDKLATRIIAEGLSVRSTEEIVAMVVA 348
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICS 291
++ K + S+ + +++ + + +SIK G+ I + + E + I
Sbjct: 349 S-GEQPKKPKTSKTNPWMGSAIQQSLENHFDTKVSIKGSAKHGRIEIVFSSPEDMDRILQ 407
Query: 292 LLGEN 296
LL N
Sbjct: 408 LLVPN 412
>gi|303230621|ref|ZP_07317371.1| ParB-like protein [Veillonella atypica ACS-049-V-Sch6]
gi|302514676|gb|EFL56668.1| ParB-like protein [Veillonella atypica ACS-049-V-Sch6]
Length = 303
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/301 (30%), Positives = 163/301 (54%), Gaps = 14/301 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M K R + LA ++GE + PE++ + I ++PN PR F+
Sbjct: 1 MVMKQKKER--KTLATMMGEQSIETALPERE-------VHELPIGDVIPNEDQPRKNFDE 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L L +SIK+ GI QP++VR + Y+I+AGERR+RAA M L VPV+++N + +
Sbjct: 52 QSLATLAESIKNLGIFQPIVVRKQKDK-YQIVAGERRYRAALMVGLETVPVVVKNYNTEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A+VEN+QR+ L+P+EEAL Y+ L++ Y TQ I + +G+SRS++AN++R+LKL +
Sbjct: 111 MTEVALVENLQREGLDPIEEALAYQGLMNTYKQTQEMISARLGRSRSYIANMMRLLKLAA 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
SV++ + + ++++G AR L++ + K + Q K+ K
Sbjct: 171 SVQKDLIEGDLTVGQARPLLALRSAAQQVEAAERIKEGELSARQAEQLVKAMMSKKTKAK 230
Query: 241 EGSREKE-KYLTDLEKKISSKVGLNISIKHRNNK---GQFCIKYETNEQLKIICSLLGEN 296
+ + + + L ++ +G +SIK R K G+ I + + +L+ + + +
Sbjct: 231 DTTEPHDTAEVRALVDRLKLSLGSPVSIKFRAGKKVQGKIEIAFSSETELERLIAYMDAQ 290
Query: 297 D 297
+
Sbjct: 291 E 291
>gi|315612160|ref|ZP_07887075.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis ATCC
49296]
gi|315315721|gb|EFU63758.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis ATCC
49296]
Length = 252
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/259 (33%), Positives = 151/259 (58%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+++ L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISISEIQKNPYQPRKEFDADKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L+ +P +++++ ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLTSIPAVVKHLSDQEMMIQSIIENLQRENLNPVEEARAYESLVEK-GFTHT 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR ++ N +R+L LP + + +IS HAR+LV + K
Sbjct: 121 EIADKMGKSRPYITNFIRLLSLPEYILAEVENGKISQAHARSLVGLDKEQQDYFFQLIKN 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + V + K++K+KK + ++ D E K+ +GL++ IK + + G+
Sbjct: 181 EDISVRKLEVLLTEKKQKKQKKS-------DSFIKDEEDKLKKLLGLSVEIKLSKKDTGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + + E+ I + L
Sbjct: 234 IIISFSSQEEYDRIINSLK 252
>gi|251783563|ref|YP_002997868.1| chromosome partitioning protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242392195|dbj|BAH82654.1| chromosome partitioning protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 268
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/260 (35%), Positives = 150/260 (57%), Gaps = 5/260 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I IV NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 12 TKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 71
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 72 ERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 131
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ +D
Sbjct: 132 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLTDEKEQLVYA-- 189
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NK 273
+++ V++ ++ + K + K ++T LE +++ +GL IK ++
Sbjct: 190 --NRIKNEGLSVRQIEHMVTPKLKTTPTQKNKNIFITSLEDQLAQSLGLPAKIKLKSTQS 247
Query: 274 GQFCIKYETNEQLKIICSLL 293
GQ + + E+L I + L
Sbjct: 248 GQLLLPFANQEELNRIINKL 267
>gi|323128315|gb|ADX25612.1| chromosome partitioning protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 258
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/260 (35%), Positives = 150/260 (57%), Gaps = 5/260 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I IV NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 2 TKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 61
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 62 ERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 121
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ +D
Sbjct: 122 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLTDEKEQLVYA-- 179
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NK 273
+++ V++ ++ + K + K ++T LE +++ +GL IK ++
Sbjct: 180 --NRIKNEGLSVRQIEHMVTPKLKTTPTQKNKNIFITSLEDQLAQSLGLPAKIKLKSTQS 237
Query: 274 GQFCIKYETNEQLKIICSLL 293
GQ + + E+L I + L
Sbjct: 238 GQLLLPFANQEELNRIINKL 257
>gi|154173813|ref|YP_001408815.1| stage 0 sporulation protein J [Campylobacter curvus 525.92]
gi|112803761|gb|EAU01105.1| stage 0 sporulation protein J [Campylobacter curvus 525.92]
Length = 286
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 176/292 (60%), Gaps = 8/292 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K+ LGRGL+A+ +V Q+ + + + I I I+PNP+ PR +F+ E L+
Sbjct: 1 MKKKSLGRGLSAIFEDVEQAYKKEFADLSSDSDIVEEIEIAKILPNPYQPRQHFDEEALK 60
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SIK HG+IQP+IV D+G Y +IAGERR+RA KM ++ II ++ +++ E+
Sbjct: 61 ELSESIKRHGLIQPIIVIKKDDG-YMLIAGERRYRATKMLGERKIKAIIADLKSQNLREL 119
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR++LNP+E A Y++LI+EY TQ+ + +I+ KSR+ + N +R+L L S ++
Sbjct: 120 ALIENIQRENLNPIELANSYKELINEYKITQDGLANIIHKSRTQITNTMRLLLLSKSTQK 179
Query: 185 MIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++++++++ GHA+ +V S D + ++ +K+SVR+TE LV++ NK ++K+
Sbjct: 180 LLQEDKLTQGHAKVIVGLSAGDEKMIVDTVIGQKLSVRETENLVKKLKNKDLQKKEKPSI 239
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
S+E L L+ + IK +N +++ Q++ L
Sbjct: 240 SKEYADKLLKLQGVF-EGFDIKSKIKSKN----LILEFSDTTQIEKFIDKLK 286
>gi|296875522|ref|ZP_06899594.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis
ATCC 15912]
gi|296433446|gb|EFH19221.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis
ATCC 15912]
Length = 253
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/259 (35%), Positives = 150/259 (57%), Gaps = 8/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + I++ I NP PR F+ E LE+L QSIK +G+IQP+IVR ++++AGER
Sbjct: 2 EKLEKIAVKDIRTNPFQPRKVFDQEKLEELAQSIKENGLIQPIIVRKSPIIGFELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRA+K+A L VP II+ + ++ + AI+EN+QR+DLNP+EEA+ Y++L ++GY +
Sbjct: 62 RFRASKIAGLELVPAIIKELTDQEMMRQAIIENLQREDLNPIEEAISYQKL-VDHGYKHD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
I +GKSR +++N+LR+L L SV+E + + +IS HAR LV + +
Sbjct: 121 QIAQFMGKSRPYISNMLRLLHLAPSVQEAVIQNDISSAHARVLVPLDEKEQCFWLERI-- 178
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQ 275
+ L K K+ + R KE +L + E+++ +G +++I NKG
Sbjct: 179 ----KQDHLNVRTLENKISSKRKQKNKRVKENFLLEEEQRLKKILGTDVTIHSSSQNKGT 234
Query: 276 FCIKYETNEQLKIICSLLG 294
I + + ++ + I + L
Sbjct: 235 IQISFSSLDEYQRIINSLK 253
>gi|331267345|ref|YP_004326975.1| chromosome partitioning protein, parB family,similar to spoOJ
[Streptococcus oralis Uo5]
gi|326684017|emb|CBZ01635.1| chromosome partitioning protein, parB family,similar to spoOJ
[Streptococcus oralis Uo5]
Length = 252
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 87/259 (33%), Positives = 148/259 (57%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISISEIQKNPYQPRKEFDVEKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L+ +P +++++ ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLTSIPAVVKHLSDQEMMIQSIIENLQRENLNPVEEARAYESLVEK-GFTHT 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
DI +GKSR ++ N +R+L LP + + +IS HAR+LV + K
Sbjct: 121 DIADKMGKSRPYITNFIRLLSLPEYILAEVENGKISQAHARSLVGLDKEQQDYFFQLIKN 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + + K +K+KK + ++ D E K+ +GL++ IK + + G+
Sbjct: 181 EDISVRKLEALLTEKKHKKQKKS-------DSFIKDEEDKLKKILGLSVEIKLSKKDTGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + + E+ I + L
Sbjct: 234 IIISFSSQEEYDRIINSLK 252
>gi|319778787|ref|YP_004129700.1| partitioning protein ParB [Taylorella equigenitalis MCE9]
gi|317108811|gb|ADU91557.1| partitioning protein ParB [Taylorella equigenitalis MCE9]
Length = 311
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 100/272 (36%), Positives = 149/272 (54%), Gaps = 5/272 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
D E P + IS+ + + PR + E LE+L SIK G++ P++VR
Sbjct: 34 DSDVLEVIKNPDPANVINISLKKLQAGKYQPRKIMDEENLEELANSIKDQGVMIPILVRP 93
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
+ Y+IIAGERRFRAA MA L+E+P +I++V+++ + +A++EN+QR+DL PLEEA G
Sbjct: 94 LAKDKYEIIAGERRFRAASMAGLTEIPALIKDVNDEQASIMALIENMQREDLKPLEEAKG 153
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS 203
+LI ++ +T VG+SRS N+LR+L L V++ + +I +GHAR L+S
Sbjct: 154 IRKLIDDFKFTHEQAAKAVGRSRSFTTNLLRLLNLAPIVQKQLDDGKIDMGHARALLSLD 213
Query: 204 DPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
+ A + SK MSVRDTE+LV K + K + LE K+S
Sbjct: 214 SAQQILVANQVESKGMSVRDTEKLVSRYLEGSRASTKSNKNK--KSTDIVRLENKLSDHF 271
Query: 262 GLNISIK-HRNNKGQFCIKYETNEQLKIICSL 292
ISIK + KGQ I + + +QL I
Sbjct: 272 NTTISIKMNTKEKGQLVINFHSWDQLNEILEK 303
>gi|119947331|ref|YP_945011.1| parB-like partition proteins [Psychromonas ingrahamii 37]
gi|119865935|gb|ABM05412.1| chromosome segregation DNA-binding protein [Psychromonas ingrahamii
37]
Length = 305
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 93/303 (30%), Positives = 171/303 (56%), Gaps = 20/303 (6%)
Query: 6 SKRRLGRGLAALIG------------EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHN 53
KR LG+GL +L+ +VN P ++ I ++ + P +
Sbjct: 4 KKRGLGKGLDSLLSSSSSHRQKQVSHDVNTDKKQPLIDDVSVKGILIDIDVNFLHPGKYQ 63
Query: 54 PRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVII 113
PR +++ L++L SI + GIIQPL++R + Y+IIAGERR+RAAK+ L VP II
Sbjct: 64 PRRGMDNKALDELANSIHAQGIIQPLVIRETGHQQYEIIAGERRWRAAKIIGLENVPCII 123
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
+NV++ +++ IA++EN+QR++LN +EEA+ ++L+ E+ T ++ VGKSR+ ++N+L
Sbjct: 124 KNVEDNAAIAIALIENIQRENLNAMEEAVALKRLLEEFDLTHIEVAKAVGKSRTTISNLL 183
Query: 174 RILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
R+ L +V+ ++ +I +GHAR L + + LA++I++K ++VR E LV++ N
Sbjct: 184 RLNNLNEAVKLLLEHGDIEMGHARALLSCEKNQQVELAKIIIAKSLNVRKAELLVKKALN 243
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIIC 290
+ +++ + + +K GL+++ K + GQ I Y + + L+ +
Sbjct: 244 PQPEKQASLPCQK-----TEKIINTFQNKFGLSVTAKTGKKQAGQLVINYNSLDDLEELM 298
Query: 291 SLL 293
+
Sbjct: 299 YKI 301
>gi|77411775|ref|ZP_00788111.1| partitioning protein, ParB family [Streptococcus agalactiae CJB111]
gi|77162166|gb|EAO73141.1| partitioning protein, ParB family [Streptococcus agalactiae CJB111]
gi|319746186|gb|EFV98456.1| chromosome partitioning protein SpoOJ [Streptococcus agalactiae
ATCC 13813]
Length = 257
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 87/259 (33%), Positives = 145/259 (55%), Gaps = 4/259 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + I+I+ I PNP+ PR F ++ LE+L SIK +G+IQP+IVR Y+++AGER
Sbjct: 2 EYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RAAK+A L +P II++ +N S+++AIVEN+QR +L+P+EEA Y QL+ + T
Sbjct: 62 RLRAAKLAKLESIPAIIKSYNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHE 121
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ +GKSR +++N +R+L LP + I + ++S GHAR L+S D
Sbjct: 122 ELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGHARALLSLPDASQQKDWYQRIL 181
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
L + +K+ K + K+ +L E +++ +G + + +++ G
Sbjct: 182 TEDISVRRLEKLLKQEKKTNHKSL---QNKDVFLKHQENELAQFLGSKVKLTINKDGAGN 238
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+L I + L
Sbjct: 239 IKIAFANQEELNRIINTLK 257
>gi|22538309|ref|NP_689160.1| ParB family partitioning protein [Streptococcus agalactiae 2603V/R]
gi|25012169|ref|NP_736564.1| hypothetical protein gbs2134 [Streptococcus agalactiae NEM316]
gi|76797990|ref|ZP_00780249.1| chromosome segregation protein [Streptococcus agalactiae 18RS21]
gi|77413649|ref|ZP_00789834.1| partitioning protein, ParB family [Streptococcus agalactiae 515]
gi|22535225|gb|AAN01033.1|AE014290_8 partitioning protein, ParB family [Streptococcus agalactiae
2603V/R]
gi|24413713|emb|CAD47793.1| Unknown [Streptococcus agalactiae NEM316]
gi|76586670|gb|EAO63169.1| chromosome segregation protein [Streptococcus agalactiae 18RS21]
gi|77160304|gb|EAO71430.1| partitioning protein, ParB family [Streptococcus agalactiae 515]
Length = 257
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 87/259 (33%), Positives = 145/259 (55%), Gaps = 4/259 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + I+I+ I PNP+ PR F ++ LE+L SIK +G+IQP+IVR Y+++AGER
Sbjct: 2 EYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RAAK+A L +P II++ +N S+++AIVEN+QR +L+P+EEA Y QL+ + T
Sbjct: 62 RLRAAKLAKLESIPAIIKSYNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHE 121
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ +GKSR +++N +R+L LP + I + ++S GHAR L+S D
Sbjct: 122 ELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGHARALLSLPDASQQKDWYQRIL 181
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
L + +K+ K + K+ +L E +++ +G + + +++ G
Sbjct: 182 TEDISVRRLEKLLKQEKKTNHKSL---QNKDVFLKHQENELAQFLGSKVKLTINKDGAGN 238
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+L I + L
Sbjct: 239 IKIAFANQEELNRIINTLK 257
>gi|77407681|ref|ZP_00784436.1| partitioning protein, ParB family [Streptococcus agalactiae COH1]
gi|77173680|gb|EAO76794.1| partitioning protein, ParB family [Streptococcus agalactiae COH1]
Length = 257
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 87/259 (33%), Positives = 145/259 (55%), Gaps = 4/259 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + I+I+ I PNP+ PR F ++ LE+L SIK +G+IQP+IVR Y+++AGER
Sbjct: 2 EYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RAAK+A L +P II++ +N S+++AIVEN+QR +L+P+EEA Y QL+ + T
Sbjct: 62 RLRAAKLAKLESIPAIIKSYNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHE 121
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ +GKSR +++N +R+L LP + I + ++S GHAR L+S D
Sbjct: 122 ELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGHARALLSLPDASQQKDWYQRIL 181
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
L + +K+ K + K+ +L E +++ +G + + +++ G
Sbjct: 182 TEDISVRRLEKLLKQEKKTNHKSL---QNKDVFLKHQENELAQFLGSKVKLTINKDGAGN 238
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+L I + L
Sbjct: 239 IKIAFNNQEELNRIINTLK 257
>gi|197302257|ref|ZP_03167316.1| hypothetical protein RUMLAC_00984 [Ruminococcus lactaris ATCC
29176]
gi|197298688|gb|EDY33229.1| hypothetical protein RUMLAC_00984 [Ruminococcus lactaris ATCC
29176]
Length = 304
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 99/280 (35%), Positives = 167/280 (59%), Gaps = 14/280 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSID------SPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
K LG+GL +LI I EK+ ++ + + I+ + PN PR F+
Sbjct: 4 KKSGLGKGLDSLIPNKKNDISDSKVEKKQEKENDSPKSGEIMVRINEVEPNRDQPRKDFD 63
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ L +L SI+ GI+QPL+V+ Y+IIAGERR+RAAK+A + EVP+I+++ ++
Sbjct: 64 EDALMELADSIRQFGILQPLLVQK-KKNYYEIIAGERRWRAAKLAGIKEVPIIVKDYTDQ 122
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+EI+++EN+QR++LNP+EEA+ +++L+ E+ Q+++ V KSR+ V N +R+LKL
Sbjct: 123 EIVEISLIENIQRENLNPIEEAMAFKRLLQEFQLKQDEVAERVSKSRTAVTNSMRLLKLS 182
Query: 180 SSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V++MI + IS GHAR L+ LA I +K+SVR+TE+LV K +
Sbjct: 183 PRVQQMIIDDMISTGHARALLAIDDEEQQFILANKIFDEKLSVRETEKLV---KALKNPK 239
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
K++ + E ++E++I + +G +S+ + N KG+
Sbjct: 240 KEVKKEKPEHTFIYENIEEQIKNIMGTKVSVNQKANGKGK 279
>gi|226326132|ref|ZP_03801650.1| hypothetical protein COPCOM_03951 [Coprococcus comes ATCC 27758]
gi|225205674|gb|EEG88028.1| hypothetical protein COPCOM_03951 [Coprococcus comes ATCC 27758]
Length = 266
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 93/259 (35%), Positives = 151/259 (58%), Gaps = 2/259 (0%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ I+ + PN PR +FE + L +L SIK GI+QPLIV+ N Y+IIAGE
Sbjct: 2 NAGPIMMKINDVEPNRDQPRKHFEEDALLELADSIKQFGILQPLIVQKR-NDYYEIIAGE 60
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK A + E+PVII+ ++ +EI+++EN+QR++LNP+EEA Y++L++E+ Q
Sbjct: 61 RRWRAAKQAGIKEIPVIIKEYTDQEIVEISLIENIQRENLNPIEEAQAYKRLLNEFRLKQ 120
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+++ V KSR+ V N +R+LKL V++MI + IS GHAR L++ D +
Sbjct: 121 DEVAERVSKSRTAVTNSMRLLKLDERVQQMIIDDMISTGHARALLAIEDKEQQYILANKV 180
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKG 274
+ + K+ +K+ + + DLE++I S +G + + H+ N KG
Sbjct: 181 FDEKLSVRDTEKLVKELKKPKKEKEKPVIQNAFVYEDLEERIKSIIGSKVHVNHKANGKG 240
Query: 275 QFCIKYETNEQLKIICSLL 293
+ I+Y ++ L+ I LL
Sbjct: 241 KIEIEYYSDNDLERIFELL 259
>gi|73663721|ref|YP_302502.1| transcriptional regulator [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72496236|dbj|BAE19557.1| putative transcriptional regulator [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 282
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 89/271 (32%), Positives = 161/271 (59%), Gaps = 5/271 (1%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
E+ T E+ I++ ++ NP+ PR F+ E L DL +SIK HGI+QP+++R +
Sbjct: 7 QDEQLTIEDNENIQKIAMTTVKANPYQPRKTFDEERLNDLAKSIKLHGILQPIVLRKTIS 66
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G + ++ GERRFRAA +A L+E+P I++++ ++ +E+AI+EN+QR+DLN +EEA Y +
Sbjct: 67 GYHIVV-GERRFRAATIAGLTEIPAIVKSLTDEDMMELAIIENLQREDLNAIEEAESYRK 125
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTS 203
L+ + TQ D+ + KSR ++AN+LR+L LP +V M+R +S H RT +
Sbjct: 126 LMDDLNLTQQDVAQRLSKSRPYIANMLRLLNLPQTVSNMVRDGALSSAHGRTLLSVKDKQ 185
Query: 204 DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
+A+ + SVR+ E V + + + + + + K K++ E+++ ++ G
Sbjct: 186 KMQQIAKQASREAWSVRELEHYVTTHYSDNKDKVEATQKA-TKPKFIRQQERQLKAQYGA 244
Query: 264 NISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
N++I +N KGQ ++++ ++ K + L
Sbjct: 245 NVAISTKNKKGQITFEFKSEDEFKRLIHQLN 275
>gi|313141096|ref|ZP_07803289.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313133606|gb|EFR51223.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 444
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 149/291 (51%), Gaps = 17/291 (5%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ K I + SIVPN PR+ F+ E L +L SIK G++QP
Sbjct: 142 SGKEKDNKETPKLKPVEGGYLLDIPVSSIVPNAQQPRSVFDEEELNELAASIKEVGVLQP 201
Query: 79 LIVRAID-------------NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
++VR + Y++I GERR+RA+++A L +P I++ + L A
Sbjct: 202 IVVRKRQAGESSKSDVSRETSQRYELIMGERRWRASQLAQLKTIPAIVKTTSDDEMLRDA 261
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+ R LNPLEEA Y+Q+I ++G TQ ++ + KSR +AN LR+L LP+SV++
Sbjct: 262 LLENLHRVALNPLEEAAAYQQMIDDFGLTQAELSKSISKSRPQIANTLRLLNLPASVQKK 321
Query: 186 IRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ +S GHAR L+ S+ LA I+ + +SVR TEE+V ++ + KK+
Sbjct: 322 VAAGVLSAGHARALLGLNDESEIDKLATRIIGEGLSVRSTEEIVALKNAESNVPKKVRPT 381
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + + + +SIK G+ I + + E ++ I S+L
Sbjct: 382 KNNPWAG-SPIVNNLENHFDTKVSIKGTQKHGRIEIVFSSPEDMERILSML 431
>gi|239637263|ref|ZP_04678251.1| stage 0 sporulation protein J [Staphylococcus warneri L37603]
gi|239597219|gb|EEQ79728.1| stage 0 sporulation protein J [Staphylococcus warneri L37603]
Length = 279
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 96/268 (35%), Positives = 157/268 (58%), Gaps = 4/268 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E +S+ I NP+ PR F+ L DL QSIK HGI+QP++VR G Y ++
Sbjct: 12 NKDEQVHSVSLALIKANPYQPRKTFDEYRLNDLAQSIKQHGILQPIVVRKTVQGYYIVV- 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRA++ A L+E+P II+ + ++ +E+AI+EN+QR+DLN +EEA Y++L+ +
Sbjct: 71 GERRFRASQKAGLTEIPAIIKELSDEDMMELAIIENLQREDLNAIEEAESYKKLMEDLNI 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQ 210
TQ ++ + KSR ++AN+LR+LKLPS V +M+R E+S H RTL S S+A+
Sbjct: 131 TQQEVAERLSKSRPYIANMLRLLKLPSDVAKMVRDGELSGAHGRTLLGLKSPQKMKSIAK 190
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
V + SVR E + + +K + + E + K K++ E+++ + G + I
Sbjct: 191 KAVKESWSVRYLESYINDYVSKTSPKTSVDEQTLNKPKFIQKQERQLKEQYGSKVDISTH 250
Query: 271 NNKGQFCIKYETNEQLKIICSLLGENDF 298
N G+ ++++ E+ K + L +N
Sbjct: 251 KNIGKIAFEFKSEEEFKSLIKKLNQNYE 278
>gi|153815412|ref|ZP_01968080.1| hypothetical protein RUMTOR_01647 [Ruminococcus torques ATCC 27756]
gi|317500874|ref|ZP_07959086.1| stage 0 sporulation protein J [Lachnospiraceae bacterium 8_1_57FAA]
gi|145847271|gb|EDK24189.1| hypothetical protein RUMTOR_01647 [Ruminococcus torques ATCC 27756]
gi|316897754|gb|EFV19813.1| stage 0 sporulation protein J [Lachnospiraceae bacterium 8_1_57FAA]
Length = 304
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 101/281 (35%), Positives = 169/281 (60%), Gaps = 15/281 (5%)
Query: 6 SKRRLGRGLAALIG-------EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
+ LG+GL +LI +Q S EK+ + + + + I+ + PN PR F
Sbjct: 4 KRNGLGKGLDSLIPNKTVKEESASQQKVSKEKQEKNVGSGEILVKINEVEPNREQPRKEF 63
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ + L +L SI+ GI+QPL+V+ Y+IIAGERR+RAAK+A + +VP+I++N +
Sbjct: 64 DEDSLMELADSIRQFGILQPLLVQK-KKDYYEIIAGERRWRAAKLAGIKDVPIIVKNYTD 122
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +EI+++EN+QR++LNP+EEA+ Y++L+ E+ Q+++ V KSR+ V N +R+LKL
Sbjct: 123 QEIVEISLIENIQRENLNPIEEAMAYKRLLEEFDLKQDEVAERVSKSRTAVTNSMRLLKL 182
Query: 179 PSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
V++MI + IS GHAR L+ LA I +K+SVR+TE+LV+ N
Sbjct: 183 SERVQQMIVDDMISTGHARALLALDDEEQQYILANKIFDEKLSVRETEKLVKALKN---P 239
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
+K++ RE +LE+ + + +G +S+ + N KG+
Sbjct: 240 KKEVKVQKREHMFVYNNLEEHLKNIIGTKVSVNPKANGKGK 280
>gi|198284887|ref|YP_002221208.1| parB-like partition protein [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667994|ref|YP_002427567.1| parB family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198249408|gb|ACH85001.1| parB-like partition protein [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218520207|gb|ACK80793.1| parB family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 294
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 90/283 (31%), Positives = 157/283 (55%), Gaps = 20/283 (7%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGRGL AL + + + + + + PR +E LE
Sbjct: 1 MKRVGLGRGLDALFASEGGA-----------GAAMREVPLDVLQRGRYQPRGLISAESLE 49
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+S G++QP+++RAI G Y+I+AGERR+RAA++A LS +P ++R ++ +L I
Sbjct: 50 ELTASIRSQGVVQPIVIRAIGGGRYEIVAGERRWRAAQLAGLSHIPAVVRECSDEQALAI 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
I+EN+QR+ LNPLEEA ++L+ E+G + + +G+SR+ ++N LR+L+L +
Sbjct: 110 GIIENIQRQALNPLEEAQALQRLLDEFGLSHEALAESLGRSRAAISNQLRLLRLCPDLHP 169
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ +S GHAR L + + +A+ +V + +SVR TE LVQ +I
Sbjct: 170 HVENGALSAGHARALLTLPDGRQVQIAERVVREALSVRATERLVQ-------AEGRIKAP 222
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQ 285
E + + L +I++++GL + ++ + G+ I++E EQ
Sbjct: 223 KAEPDANVAALSARIAARLGLPVDLRAQGRGGELRIRWENPEQ 265
>gi|310288298|ref|YP_003939557.1| Chromosome partitioning protein parB [Bifidobacterium bifidum S17]
gi|311065159|ref|YP_003971885.1| chromosome partitioning protein [Bifidobacterium bifidum PRL2010]
gi|309252235|gb|ADO53983.1| Chromosome partitioning protein parB [Bifidobacterium bifidum S17]
gi|310867479|gb|ADP36848.1| Chromosome partitioning protein [Bifidobacterium bifidum PRL2010]
Length = 454
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 149/291 (51%), Gaps = 17/291 (5%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + I + SIVPN PR+ F+ E L +L SIK G++QP
Sbjct: 152 SGKEKDNKETPELKPVEGGYLLDIPVSSIVPNAQQPRSVFDEEELNELAASIKEVGVLQP 211
Query: 79 LIVRAID-------------NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
++VR + Y++I GERR+RA+++A L +P I++ + L A
Sbjct: 212 IVVRKRQAGESSKSDVSRETSQRYELIMGERRWRASQLAQLKTIPAIVKTTSDDEMLRDA 271
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+ R LNPLEEA Y+Q+I ++G TQ ++ + KSR +AN LR+L LP+SV++
Sbjct: 272 LLENLHRVALNPLEEAAAYQQMIDDFGLTQAELSKSISKSRPQIANTLRLLNLPASVQKK 331
Query: 186 IRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ +S GHAR L+ S+ LA I+ + +SVR TEE+V ++ + KK+
Sbjct: 332 VAAGVLSAGHARALLGLNDESEIDKLATRIIGEGLSVRSTEEIVALKNAESNVPKKVRPT 391
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + + + +SIK G+ I + + E ++ I S+L
Sbjct: 392 KNNPWAG-SPIVNNLENHFDTKVSIKGTQKHGRIEIVFSSPEDMERILSML 441
>gi|254498851|ref|ZP_05111559.1| chromosome partitioning protein ParB (SpoOJ) [Legionella
drancourtii LLAP12]
gi|254351934|gb|EET10761.1| chromosome partitioning protein ParB (SpoOJ) [Legionella
drancourtii LLAP12]
Length = 263
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 104/261 (39%), Positives = 154/261 (59%), Gaps = 7/261 (2%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
I I +I + PR F S L +L QSI S G+I+PLIVR+I Y+IIAGER
Sbjct: 3 TEFQQIPIDNIQAGQYQPRQDFNSAALAELAQSIASQGLIEPLIVRSIAKERYEIIAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RAAK+A + +VP +I N +K + + +VEN+QR+DLN +EEA Y +L+ E+ Y Q
Sbjct: 63 RWRAAKLAGMQQVPCLIGNYTDKQACALTLVENIQREDLNLIEEASAYRRLMDEFHYHQE 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVS 214
+I ++VGKSRSHVANILR+L L V+E +R + +SLGHAR LV + LA+ +
Sbjct: 123 EIATLVGKSRSHVANILRLLSLTGYVKEHLRNKTLSLGHARMLVGLNPVQQEYLAEQAIE 182
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNK 273
+ SVR E V+EQ N+ K + K++ + L+ ++ +VG + I +
Sbjct: 183 GQWSVRQLEHAVKEQKNQAIAVPKNAK----KDRDIERLQTILAEQVGAPVQIVTDNEDG 238
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G +K+ N+ L + LG
Sbjct: 239 GWLQVKFFDNDTLAGLLERLG 259
>gi|171778194|ref|ZP_02919423.1| hypothetical protein STRINF_00262 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283018|gb|EDT48442.1| hypothetical protein STRINF_00262 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 260
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 101/260 (38%), Positives = 160/260 (61%), Gaps = 4/260 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ + I I I PNP+ PR F+ E LE+L +SIK++G+IQP+IVR D Y++IAGER
Sbjct: 3 ETLNLIPIDDIAPNPYQPRLKFKPEELEELSRSIKANGLIQPIIVRKSDIFGYELIAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R +A+KMA LSE+P II+++ NK S+++AIVEN+QR DLNP+EEA Y+QL+ + T
Sbjct: 63 RLKASKMAGLSEIPAIIKDITNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDKNQMTHE 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ +GKSR ++ N LR+L LP+++ + K E+S GHAR L++ D + K
Sbjct: 123 ELAQFMGKSRPYITNCLRLLNLPANISHAVEKGELSQGHARVLLTLKDEKEQEKWYQ--K 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--KG 274
+ D EQ K K+KK +K+ ++ E+++S +GL +++ + KG
Sbjct: 181 ILSEDMSVRKLEQAVKSTKKKKTSTKVSKKDIFIRHQEEELSKLLGLPVTLSLSKSGFKG 240
Query: 275 QFCIKYETNEQLKIICSLLG 294
+ +++ E L I + L
Sbjct: 241 DLQLHFQSEEDLNRIINRLK 260
>gi|251772735|gb|EES53297.1| parB-like partition protein [Leptospirillum ferrodiazotrophum]
Length = 288
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 148/291 (50%), Gaps = 15/291 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K LGRG+ +L G+ S P K I + I PNP PR F E LE
Sbjct: 1 MAKISLGRGIDSLYGDEETSTGKPPSK----------IPMKEIHPNPFQPRKTFTEESLE 50
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ HG++ P+IV D +++GERRFRAA+ ++ II+ + ++ LEI
Sbjct: 51 ELTLSIERHGLLHPVIVVKRDGVYT-LVSGERRFRAAERLGWRDIDAIIKELTDQELLEI 109
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN++R DLNPLE G E+L E+ +TQ +I +G RS VAN LR+L++ V+E
Sbjct: 110 ALVENLKRSDLNPLEIGEGLERLSREFDWTQENISEHLGMKRSSVANYLRLLEMDPDVKE 169
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+RK +IS GHA+ L S + + + +D K E
Sbjct: 170 SLRKGDISFGHAKILSSLEPG----EQRKWTARVIARGLSVRALEDQIARAPKAKVEKDS 225
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++++ + + +SS + +IK + + + ++L+ + + L E
Sbjct: 226 KVQEWIGENSQVLSSALQCRATIKKEKKGWKVELSFNRMDELEDLITKLSE 276
>gi|169335399|ref|ZP_02862592.1| hypothetical protein ANASTE_01811 [Anaerofustis stercorihominis DSM
17244]
gi|169258137|gb|EDS72103.1| hypothetical protein ANASTE_01811 [Anaerofustis stercorihominis DSM
17244]
Length = 293
Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 103/284 (36%), Positives = 158/284 (55%), Gaps = 7/284 (2%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
ALI + + E I + I++ N + PR +F+ E +++L SIK HG+
Sbjct: 14 ALIPQEDVDGVFSENNEHDIKK--VDINLVK--ANANQPRKHFDKEKIKELSDSIKEHGV 69
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
IQPL+V DN + AGERR+RA+ +A L EVPVII++ K E++++EN+QR+DL
Sbjct: 70 IQPLLVVKEDNEYVIV-AGERRYRASILAGLKEVPVIIKDYSEKEISEVSLIENLQREDL 128
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
N +E+A Y +L + TQ DI +G SR+ VAN LR+L L +++ IR +IS GH
Sbjct: 129 NEIEKAEAYNELKESFKMTQEDIAKRLGTSRASVANTLRLLSLTEDIKKAIRDNKISAGH 188
Query: 196 ARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
AR + V + I+SK +SVR++E+L +E K + K +++ Y+ DL
Sbjct: 189 ARAILSVDEKYRDEFLEEIISKNLSVRESEKLSKEFKGNKNDKPKKTIKEKKENPYIVDL 248
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
E K+S G + + + NKG I Y +NE L + L D
Sbjct: 249 EHKMSLTFGTKVKLNDKGNKGSIVIDYYSNEDLSRLLELFNIED 292
>gi|306828597|ref|ZP_07461791.1| ParB/SpoJ family partitioning protein [Streptococcus mitis ATCC
6249]
gi|304429205|gb|EFM32291.1| ParB/SpoJ family partitioning protein [Streptococcus mitis ATCC
6249]
Length = 252
Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 148/259 (57%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+++ L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISISEIQKNPYQPRKEFDADKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L+ +P +++++ ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLTSIPALVKHLSDQEMMIQSIIENLQRENLNPVEEARAYESLVEK-GFTHT 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR ++ N +R+L LP + + +IS HAR+LV + K
Sbjct: 121 EIADKMGKSRPYITNFIRLLSLPEHILSEVENGKISQAHARSLVGLDKEQQEYFFQLIKN 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + + +K + ++ + ++ D E K+ +G+N+ IK + + G+
Sbjct: 181 ED-------ISVRKLETLLTEKKQKKQKKSDSFIKDEEDKLKKLLGVNVEIKLSKKDTGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + + E+ I + L
Sbjct: 234 IVISFSSQEEYDRIINSLK 252
>gi|257070284|ref|YP_003156539.1| ParB-like partition protein [Brachybacterium faecium DSM 4810]
gi|256561102|gb|ACU86949.1| ParB-like partition protein [Brachybacterium faecium DSM 4810]
Length = 624
Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 87/261 (33%), Positives = 149/261 (57%), Gaps = 9/261 (3%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGER 96
I IH + NP NPR F+ + L++L S++ G++QP++VR D ++++ GER
Sbjct: 353 EIPIHEVRENPRNPRTMFDEDELDELAYSLREVGVLQPVVVRPIPVTDDGESFELVMGER 412
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RAA+ A L +P IIR + L A++EN+ R LNPLEEA Y+QL+ ++G TQ+
Sbjct: 413 RWRAARRAGLQSIPAIIRETSDDDLLRDALLENLHRTQLNPLEEANAYQQLLEDFGCTQD 472
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIV 213
++G +G+SR + N LR+L+LP+ V+ + IS GHAR L+ + LAQ IV
Sbjct: 473 ELGERIGRSRPQITNTLRLLRLPALVQRRLASGAISAGHARALLSLDDPALMEELAQRIV 532
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK 273
+ +SVR E LV ++ + + + + ++ DL ++S+++ + I K
Sbjct: 533 QEGLSVRAVERLVARGGQQQTATRTVRRST--YDPHVVDLTSRLSNRLEAPVRIDVGKRK 590
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G+ +++ E L+ + +G
Sbjct: 591 GRITLEFTNLEDLERLVENMG 611
>gi|227485735|ref|ZP_03916051.1| possible stage 0 DNA-binding protein [Anaerococcus lactolyticus
ATCC 51172]
gi|227236290|gb|EEI86305.1| possible stage 0 DNA-binding protein [Anaerococcus lactolyticus
ATCC 51172]
Length = 308
Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 154/308 (50%), Gaps = 16/308 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIP-ESQDCISIHSIVPNPHNPRNYFESEGL 63
++R LGRGL++LI ++ + + + + + I + P P PR F+S+ L
Sbjct: 2 TNRRSLGRGLSSLIPDIKEERKDSIRGFDEVDFSKVASLPIEKVKPRPGQPRKDFDSKAL 61
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
EDL SIK +G++ I + Y+I+AGERR+RA + + I++ + K
Sbjct: 62 EDLAHSIKEYGLL-NPITVTKNGDYYEILAGERRYRATLLNQADTIDAIVKTYEQKDIEV 120
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
++++ENVQR+DL+ +EEA Y++LI YG TQ +I +GKSRS++AN +R+LKL +
Sbjct: 121 LSLIENVQREDLSAIEEATAYKKLIDSYGLTQEEIAKKMGKSRSYIANTIRLLKLNEEEK 180
Query: 184 EMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK--- 237
+R IS AR+L+ ++KK+ VRD E++ +E N K
Sbjct: 181 AALRDGSISPSQARSLLSLDDGEKRDKALDDYINKKVVVRDVEKISREDKNPPRKNFIDL 240
Query: 238 ---KIFEGSREKEKYLTDL-----EKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
+ EK L L E+K K+ ++I+ + + I + E ++ I
Sbjct: 241 TGKSDNKPKEEKIPNLDSLLFDDFEEKFMDKLATKVAIEKTKDAYKVVIDCYSIEDIEKI 300
Query: 290 CSLLGEND 297
+ D
Sbjct: 301 YDRISYED 308
>gi|331089224|ref|ZP_08338126.1| hypothetical protein HMPREF1025_01709 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330405776|gb|EGG85305.1| hypothetical protein HMPREF1025_01709 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 304
Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 100/281 (35%), Positives = 169/281 (60%), Gaps = 15/281 (5%)
Query: 6 SKRRLGRGLAALIG-------EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
+ LG+GL +LI +Q S EK+ + + + + I+ + PN PR F
Sbjct: 4 KRNGLGKGLDSLIPNKTVKEESASQQKVSKEKQEKNVGSGEILVKINEVEPNREQPRKEF 63
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ + L +L SI+ GI+QPL+V+ Y+IIAGERR+RAAK+A + +VP+I++N +
Sbjct: 64 DEDSLMELADSIRQFGILQPLLVQK-KKDYYEIIAGERRWRAAKLAGIKDVPIIVKNYTD 122
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ +EI+++EN+QR++LNP+EEA+ Y++L+ E+ Q+++ V KSR+ V N +R+LKL
Sbjct: 123 QEIVEISLIENIQRENLNPIEEAMAYKRLLEEFDLKQDEVAERVSKSRTAVTNSMRLLKL 182
Query: 179 PSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
V++MI + IS GHAR L+ LA I +K+SVR+TE+LV+ N
Sbjct: 183 SERVQQMIVDDMISTGHARALLALDDEEQQYILANKIFDEKLSVRETEKLVKALKN---P 239
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
+K++ +E +LE+ + + +G +S+ + N KG+
Sbjct: 240 KKEVKVQKQEHMFVYDNLEEHLKNIIGTKVSVNPKANGKGK 280
>gi|224283944|ref|ZP_03647266.1| parB-like partition protein [Bifidobacterium bifidum NCIMB 41171]
Length = 291
Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 147/277 (53%), Gaps = 17/277 (6%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID------- 85
I + SIVPN PR+ F+ E L +L SIK G++QP++VR
Sbjct: 3 PVEGGYLLDIPVSSIVPNAQQPRSVFDEEELNELAASIKEVGVLQPIVVRKRQAGESSKS 62
Query: 86 ------NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+ Y++I GERR+RA+++A L +P I++ + L A++EN+ R LNPLE
Sbjct: 63 DVSRETSQRYELIMGERRWRASQLAQLKTIPAIVKTTSDDEMLRDALLENLHRVALNPLE 122
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA Y+Q+I ++G TQ ++ + KSR +AN LR+L LP+SV++ + +S GHAR L
Sbjct: 123 EAAAYQQMIDDFGLTQAELSKSISKSRPQIANTLRLLNLPASVQKKVAAGVLSAGHARAL 182
Query: 200 V---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ S+ LA I+ + +SVR TEE+V ++ + KK+ + +
Sbjct: 183 LGLNDESEIDKLATRIIGEGLSVRSTEEIVALKNAESNVPKKVRPTKNNPWAG-SPIVNN 241
Query: 257 ISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + +SIK G+ I + + E ++ I S+L
Sbjct: 242 LENHFDTKVSIKGTQKHGRIEIVFSSPEDMERILSML 278
>gi|300934358|ref|ZP_07149614.1| chromosome partitioning protein ParB [Corynebacterium resistens DSM
45100]
Length = 446
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 85/278 (30%), Positives = 142/278 (51%), Gaps = 19/278 (6%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIA 93
+ I I N PR FE E L +L SI+ G++QP++VR + Y++I
Sbjct: 166 GAEYRELPIGGIRTNAKQPRQVFEEEALNELVHSIREFGLMQPIVVRYSPDGDTDYELIM 225
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR RA+ A L +P I+R D+ + L A++EN+ R LNPLEEA Y+QL+ E+G
Sbjct: 226 GERRLRASMKAGLESIPAIVRETDDDAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGV 285
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---------------- 197
TQ ++ +G+SR + N++R+L+LP V+ + +S GHAR
Sbjct: 286 TQAELAQKLGRSRPLITNMIRLLQLPVPVQRRVGAGVLSAGHARALLGVRASSEIADDEA 345
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK-EKYLTDLEKK 256
+ +A IV++ +SVR TEE V + + RKK +R++ ++ ++
Sbjct: 346 KVYVQRAQGQIADRIVAEGLSVRATEEAVTLFNRGENVRKKNSNKARQELSPEVSTWVEE 405
Query: 257 ISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
IS + +S++ +G+ +++ E I +L
Sbjct: 406 ISDALDTKVSVQMGKKRGKIVVEFGGPEDFDRITEILK 443
>gi|157165662|ref|YP_001466339.1| stage 0 sporulation protein J [Campylobacter concisus 13826]
gi|157101554|gb|EAT97249.2| stage 0 sporulation protein J [Campylobacter concisus 13826]
Length = 286
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 101/291 (34%), Positives = 183/291 (62%), Gaps = 9/291 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRGL+A++ +V Q+ E + I+I I+PNP+ PR +F+ E L++
Sbjct: 3 KKGGLGRGLSAILEDVEQAYSKEIANLNDS-EIVEEINIDEILPNPYQPRTHFDEEALKE 61
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK HG+IQP+IV D+G Y +IAGERR+RA KM S++ II ++ +++ E+A
Sbjct: 62 LSASIKRHGLIQPIIVIKKDDG-YMLIAGERRYRATKMLGASKIKAIIADIKSQNLRELA 120
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR++LNP+E A Y++LI+EY TQ+ + +I+ KSR+ + N +R+L L + +
Sbjct: 121 LIENIQRENLNPIELAKSYKELINEYKITQDGLANIIHKSRTQITNTMRLLLLSDYTQRL 180
Query: 186 IRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+++++++ GHA+ +V S+ + + I+ +K+SVRDTE LV++ NK+E ++ + S
Sbjct: 181 LQEDKLTQGHAKVIVGLSSEEERMVVDTIIGQKLSVRDTEILVKKIKNKEEVKEPKPQIS 240
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E K L++L++ + + + +K++N +++ Q++ + L
Sbjct: 241 EEMSKKLSNLQEIFKN-LKIKTKVKYKN----LILEFSDISQVEEFIAKLK 286
>gi|209560287|ref|YP_002286759.1| Chromosome partitioning protein parB [Streptococcus pyogenes NZ131]
gi|209541488|gb|ACI62064.1| Chromosome partitioning protein parB [Streptococcus pyogenes NZ131]
Length = 268
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 91/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I IV NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 12 TKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 71
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 72 ERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 131
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ SD +
Sbjct: 132 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKTIEEGKISAGHARALLTLSDDKQQLYLT-- 189
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNK 273
+++ V++ + + K + T LEK+++ +GL++++K N+
Sbjct: 190 --YKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHS 247
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G I + +++L I + L
Sbjct: 248 GYLQISFSNDDELNRIINKLK 268
>gi|320451552|ref|YP_004203648.1| stage 0 sporulation protein J [Thermus scotoductus SA-01]
gi|320151721|gb|ADW23099.1| stage 0 sporulation protein J [Thermus scotoductus SA-01]
Length = 270
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 103/282 (36%), Positives = 154/282 (54%), Gaps = 27/282 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS S LGRGL AL+ + + +I PNPH PR F
Sbjct: 1 MSKKAS--GLGRGLEALLP--------------KGGGGVVRLPLSAIRPNPHQPRRRFSQ 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
EGLE+L SI+ G++QPL+VR G Y+++AGERR RAA+MA L E+PVIIR++ ++
Sbjct: 45 EGLEELAASIREKGLLQPLVVRPKGEG-YELVAGERRLRAAEMAGLKEIPVIIRDLTDQE 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++E+A+VEN+QR+DL PLEEA GY+ L+ TQ ++ VGK+RS VAN LR+L+LP
Sbjct: 104 AMEVALVENLQREDLTPLEEARGYQALLGLGL-TQEEVAKRVGKARSTVANALRLLQLPE 162
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V E++ + IS GHAR L+ L + + + + + +E+ +K
Sbjct: 163 EVLEVLEQGLISAGHARALLMLEPEDRLWGLREILEKGLSVRQAEALRERLVRERERKTQ 222
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYET 282
E S L ++S +GL + + +G+ I Y +
Sbjct: 223 EPSP--------LSLELSRHLGLPVRV-VGGRRGKVVIHYRS 255
>gi|320095099|ref|ZP_08026808.1| plasmid partition ParB protein [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977966|gb|EFW09600.1| plasmid partition ParB protein [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 427
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 154/298 (51%), Gaps = 28/298 (9%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+V++ + S + + IVPN PR F+ E L +L SIK G++QP
Sbjct: 132 SDVSRETSEEVELLPVPGASFAEVPVDQIVPNAKQPREIFDEEDLAELAASIKEVGVLQP 191
Query: 79 LIVRAI----------------DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
++VR I + Y++I GERR RA+++A + +P IIR D+ L
Sbjct: 192 VVVRPIPDGEPEGRLKEYLAEKPDAKYELIMGERRLRASQLAGETTIPAIIRQTDDSDLL 251
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
A++EN+ R LNPLEEA Y+QL++++G TQ ++ + +SR +AN LR+LKLP +V
Sbjct: 252 RDALLENLHRAQLNPLEEASAYQQLMADFGATQEELAKRIARSRPQIANTLRLLKLPPAV 311
Query: 183 REMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++ + + IS GHAR L S + LA I+S+ +SVR TEELV+ K
Sbjct: 312 QKKVAAQVISAGHARALLALPSADEMERLADRIISEGLSVRTTEELVRLGK-----VKAG 366
Query: 240 FEGSREKEKYLTDLEKK----ISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ K+ ++ L + + ++I KG+ I++ ++ L+ I L+
Sbjct: 367 PKPRARKKPQVSALGESVVTALQDVYETRVTITEGRKKGKIVIEFAGSDDLQRIADLI 424
>gi|94993395|ref|YP_601494.1| chromosome partitioning protein parB [Streptococcus pyogenes
MGAS2096]
gi|94546903|gb|ABF36950.1| Chromosome partitioning protein parB [Streptococcus pyogenes
MGAS2096]
Length = 268
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 91/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I IV NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 12 TKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 71
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 72 ERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 131
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ SD +
Sbjct: 132 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKTIEEGKISAGHARALLTLSDDKQQLYLT-- 189
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNK 273
+++ V++ + + K + T LEK+++ +GL++++K N+
Sbjct: 190 --HKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHS 247
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G I + +++L I + L
Sbjct: 248 GYLQISFSNDDELNRIINKLK 268
>gi|284047377|ref|YP_003397717.1| parB-like partition protein [Conexibacter woesei DSM 14684]
gi|283951598|gb|ADB54342.1| parB-like partition protein [Conexibacter woesei DSM 14684]
Length = 295
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 89/302 (29%), Positives = 165/302 (54%), Gaps = 20/302 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ R +GRGL+A++ + E + I I PNPH PR++FE
Sbjct: 1 MAD--KSRGMGRGLSAILSAAPRDEA----------EELRTLPIDLIAPNPHQPRSHFEE 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L L +S+K+ G++QP++VR + +G Y++IAGERR+RAA +A ++E+P I+R+ D+ +
Sbjct: 49 EALVALAESLKARGLLQPVLVRPLADGSYELIAGERRWRAAGIAGIAEIPAIVRHHDDAA 108
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
SLE+A++EN+ R+DL+P+EEA L+ E T+ D+G VG+SR V+N++R+L LP
Sbjct: 109 SLELAVIENMAREDLSPVEEARACAALVEELSLTREDVGRRVGRSRVAVSNLIRLLDLPD 168
Query: 181 SVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR- 236
++ + +++ GH R L D LA+ + SVR+ E + +++
Sbjct: 169 EALTLLERGDLTEGHGRALLLAPDHGDRRQLARDAAAAGWSVRELERRARAAADRETGPA 228
Query: 237 ----KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
+ ++++ + L S G ++ + + + +++++ + +
Sbjct: 229 VRARPRAPRVHPDQQEAIGQLSDVFGSAFGTDVEVSAKGPGYRVLLEFDSLDDALDLARR 288
Query: 293 LG 294
LG
Sbjct: 289 LG 290
>gi|328464353|gb|EGF35765.1| chromosome partitioning protein [Lactobacillus helveticus MTCC
5463]
Length = 280
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 101/293 (34%), Positives = 158/293 (53%), Gaps = 27/293 (9%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRG+ AL + Q ++ E +++ I PNP+ PR F+ + L++
Sbjct: 12 KKGGLGRGIEALFEDEPQIEETEE---------VQELNLSEIRPNPYQPRKRFDDKSLKE 62
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK +G+ QP++VR Y+IIAGERR+RA+K+A +P I+R D +E+A
Sbjct: 63 LSDSIKENGVFQPIVVRK-SVNGYEIIAGERRYRASKLAKKKIIPAIVRKFDESQMMEVA 121
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL PLEEA YE L TQ +I +GKSR ++AN LR+L LPS + +
Sbjct: 122 VLENLQREDLTPLEEAQAYEMLQKNLSLTQEEISKRMGKSRPYIANYLRLLTLPSKTKRL 181
Query: 186 IRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ E+S+G ART L LA+ + + + VR E LV + + KK
Sbjct: 182 LQHGELSMGQARTLLALKDKDKIDGLAKKVAQEGIPVRKVEALVNKMNA-----KKPQNK 236
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ +K ++ E ++S+K G +++I + + Y QL I LL
Sbjct: 237 AIKKSAFIRASENQLSNKFGASVNISETK---KVRVTY----QL--ILLLLKS 280
>gi|313681881|ref|YP_004059619.1| chromosome segregation DNA-binding protein [Sulfuricurvum kujiense
DSM 16994]
gi|313154741|gb|ADR33419.1| chromosome segregation DNA-binding protein [Sulfuricurvum kujiense
DSM 16994]
Length = 280
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 92/295 (31%), Positives = 157/295 (53%), Gaps = 20/295 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ LGRGL AL+ E+ ++ D+ K + I++ I PNP+ PR +F+S
Sbjct: 1 MAKA---SALGRGLGALLSEIEEAYDNELPK----KGGVEEIAVAKIRPNPYQPRKHFDS 53
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L +SIK+HG++Q IV D Y +IAGERR RA+K+A + I+ +V ++
Sbjct: 54 ESLAELAESIKTHGLLQ-PIVIKEDLDGYILIAGERRLRASKLAKNKTIKAIVVSVSDEQ 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E A++EN+QR +LN ++ A Y++LI + T + V KSR+ + N LR+L+L
Sbjct: 113 MREHALIENIQRDELNVIDLAQAYQELIDIHELTHEQLSQTVHKSRTQITNTLRLLQLNE 172
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
R+ + +IS GHA+ + + +++ + I+ +K+SVRD E +V++
Sbjct: 173 KGRKALVDGKISAGHAKVILGLESNEQAMMIDSIIGQKLSVRDVESMVKKIKLPATSSNT 232
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKG-QFCIKYETNEQLKIICSL 292
FE L+K++ +G KG + I+++ N Q++ L
Sbjct: 233 SFEVEGL---DFAALKKQL-DALGYKC-----GTKGYKLTIEFKNNGQIESFLDL 278
>gi|289677539|ref|ZP_06498429.1| ParB-like partition protein [Pseudomonas syringae pv. syringae FF5]
Length = 231
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 85/233 (36%), Positives = 147/233 (63%), Gaps = 5/233 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSSPTVS-SLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIKS G++QP++VR I + ++IIAGERR+RA++ A + +P ++R+V +++
Sbjct: 58 QALEELAQSIKSQGVMQPIVVRPIGDNRFEIIAGERRWRASQQAGVETIPAMVRDVPDET 117
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR VAN+LR++ LP
Sbjct: 118 AIAMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPE 177
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
+++ M+ ++ +GHAR L + + A+ +V++ ++VR TE LV++ +
Sbjct: 178 AIKTMLSHGDLEMGHARALLGLGEDRQVEGARHVVARGLTVRQTEALVRQWLS 230
>gi|293364515|ref|ZP_06611240.1| ParB/SpoJ family partitioning protein [Streptococcus oralis ATCC
35037]
gi|307702805|ref|ZP_07639755.1| stage 0 sporulation protein J [Streptococcus oralis ATCC 35037]
gi|291317023|gb|EFE57451.1| ParB/SpoJ family partitioning protein [Streptococcus oralis ATCC
35037]
gi|307623661|gb|EFO02648.1| stage 0 sporulation protein J [Streptococcus oralis ATCC 35037]
Length = 252
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 147/259 (56%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+++ L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISISEIQKNPYQPRKEFDADKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L+ +P +++++ ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLTSIPAVVKHLSDQEMMIQSIIENLQRENLNPVEEARAYESLVEK-GFTHT 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR ++ N +R+L LP + + +IS HAR+LV + K
Sbjct: 121 EIADKMGKSRPYITNFIRLLSLPEYILTEVENGKISQAHARSLVGLDKKQQDYFFQLIKN 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + +K + ++ + ++ D E K+ +GL++ IK + + G+
Sbjct: 181 EDISVRKLEALL-------TEKKQKKQKKSDSFIKDEEDKLKKLLGLSVEIKLSKKDTGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + + E+ I + L
Sbjct: 234 IIISFSSQEEYDRIINSLK 252
>gi|116628682|ref|YP_821301.1| ParB-like nuclease domain-containing protein [Streptococcus
thermophilus LMD-9]
gi|116101959|gb|ABJ67105.1| chromosome segregation DNA-binding protein [Streptococcus
thermophilus LMD-9]
Length = 255
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 89/259 (34%), Positives = 142/259 (54%), Gaps = 7/259 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E +SI I PNP PR F E L +L QSI +G+IQP+IVR D Y++IAGE
Sbjct: 2 SEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA K ++E+P +++ V ++ S + AI+EN+QR +LNP+EEA Y LI E Y+
Sbjct: 62 RRLRACKRLGMTEIPAVVKEVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSH 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ +GKSR +++N+LR+L+LP ++ I +S GHAR L++ D +
Sbjct: 122 EELAKAMGKSRPYISNVLRLLQLPREIQTSIENGSLSQGHARALLAIEDSQKQLTIFQQV 181
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKG 274
L ++ + +K+ ++ D EK++ +GL I+++ H+N+ G
Sbjct: 182 VAERWSVRTLEKKLQEL------PRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSG 235
Query: 275 QFCIKYETNEQLKIICSLL 293
I + T E I + L
Sbjct: 236 TIQIHFSTEEDFNRIINKL 254
>gi|15675946|ref|NP_270120.1| putative chromosome segregation protein [Streptococcus pyogenes M1
GAS]
gi|71911679|ref|YP_283229.1| chromosome partitioning protein [Streptococcus pyogenes MGAS5005]
gi|94989508|ref|YP_597609.1| chromosome partitioning protein [Streptococcus pyogenes MGAS9429]
gi|94991496|ref|YP_599596.1| chromosome partitioning protein parB [Streptococcus pyogenes
MGAS10270]
gi|13623187|gb|AAK34841.1| putative chromosome segregation protein [Streptococcus pyogenes M1
GAS]
gi|71854461|gb|AAZ52484.1| chromosome partitioning protein [Streptococcus pyogenes MGAS5005]
gi|94543016|gb|ABF33065.1| chromosome partitioning protein [Streptococcus pyogenes MGAS9429]
gi|94545004|gb|ABF35052.1| Chromosome partitioning protein parB [Streptococcus pyogenes
MGAS10270]
Length = 268
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 91/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I IV NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 12 TKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 71
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 72 ERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 131
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ SD +
Sbjct: 132 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLSDDKQQLYLT-- 189
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNK 273
+++ V++ + + K + T LEK+++ +GL++++K N+
Sbjct: 190 --HKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHS 247
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G I + +++L I + L
Sbjct: 248 GYLQISFSNDDELNRIINKLK 268
>gi|242310676|ref|ZP_04809831.1| stage 0 sporulation protein j [Helicobacter pullorum MIT 98-5489]
gi|239523074|gb|EEQ62940.1| stage 0 sporulation protein j [Helicobacter pullorum MIT 98-5489]
Length = 297
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 98/299 (32%), Positives = 173/299 (57%), Gaps = 13/299 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL+A++GEV ++ + I I I PNP PR F++
Sbjct: 1 MAKKNA--GLGRGLSAILGEVEEAY---QNNLNDNSGLVVEIEIDKIKPNPLQPRKVFDN 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVR--AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L++L SI+ HG++QP++V ++ Y +IAGERR RA+K+A + II +V
Sbjct: 56 ESLQELAASIQEHGLLQPILVYEDMDNSDEYFLIAGERRLRASKIAHKESIKAIIVDVQE 115
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ E+A++EN+QR+DLNP++ A Y++LI +YG T ++ + KSR+ + N LR+L+L
Sbjct: 116 EKLRELALIENIQREDLNPIDLAQSYKELIEDYGITHEELAKKLSKSRTQITNTLRLLEL 175
Query: 179 PSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
+V++ + + +IS GHA+ LV +A I+ +K+SV DTE L+++ + +
Sbjct: 176 DKNVQKYVLENKISQGHAKVLVALPKEQQNIIANSIIGQKLSVHDTENLIRKLKEGQLQD 235
Query: 237 KKIFEGSREK-EKYLTD-LEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
KKI ++ + + + LEK + N++IK + NK +++ +E+++ +L
Sbjct: 236 KKIPSLAQNRISPHSKEQLEKICKAIQKQNLNIKLQKNK--IIVEFSNDEEVERFSKIL 292
>gi|19747046|ref|NP_608182.1| chromosome segregation protein [Streptococcus pyogenes MGAS8232]
gi|19749307|gb|AAL98681.1| putative chromosome segregation protein [Streptococcus pyogenes
MGAS8232]
Length = 268
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 91/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I IV NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 12 TKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 71
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 72 ERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 131
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ SD +
Sbjct: 132 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKSIEEGKISAGHARALLTLSDDKQQLYLT-- 189
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNK 273
+++ V++ + + K + T LEK+++ +GL++++K N+
Sbjct: 190 --HKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHS 247
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G I + +++L I + L
Sbjct: 248 GYLQISFSNDDELNRIINKLK 268
>gi|50915232|ref|YP_061204.1| chromosome partitioning protein [Streptococcus pyogenes MGAS10394]
gi|139474633|ref|YP_001129349.1| chromosome partitioning protein [Streptococcus pyogenes str.
Manfredo]
gi|50904306|gb|AAT88021.1| Chromosome partitioning protein [Streptococcus pyogenes MGAS10394]
gi|134272880|emb|CAM31163.1| putative chromosome partitioning protein [Streptococcus pyogenes
str. Manfredo]
Length = 268
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 90/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I IV NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 12 TKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 71
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L ++P II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 72 ERRLKASKMAGLKKIPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 131
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ SD +
Sbjct: 132 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLSDDKQQLYLT-- 189
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNK 273
+++ V++ + + K + T LEK+++ +GL++++K N+
Sbjct: 190 --HKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHS 247
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G I + +++L I + L
Sbjct: 248 GYLQISFSNDDELNRIINKLK 268
>gi|303256385|ref|ZP_07342399.1| ParB family protein [Burkholderiales bacterium 1_1_47]
gi|302859876|gb|EFL82953.1| ParB family protein [Burkholderiales bacterium 1_1_47]
Length = 299
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 167/290 (57%), Gaps = 7/290 (2%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
++ LG+ + ++ N + +PE + + + ++ P PRN E+ GL +L
Sbjct: 8 RKGLGKNMDSVFSMKNV---ADVIDNPKVPEPKSSLPLSALKPGKFQPRNDVENSGLAEL 64
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
QSIK +GI+ P++VR + + Y+I+AGERR++AAK+A L +VPV I +V +K ++ + +
Sbjct: 65 AQSIKQNGILNPIVVRKLSSDKYEILAGERRYQAAKIAGLKKVPVTILDVSDKQAMIVGL 124
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
VEN+QRKDL+ LE A G ++LI E+ Y+ + +G+SR ++N+LR+L LP +V+ M+
Sbjct: 125 VENLQRKDLSALETAEGIQRLIEEFKYSHEGVAEAIGRSRPMISNLLRLLGLPEAVKTML 184
Query: 187 RKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
R EI +GHAR L + + LAQ I K +SVR TEE V ++ + + +
Sbjct: 185 RAGEIEMGHARALLSLPEEQQVWLAQQIKEKGLSVRQTEEYVARYKERENTSENPHK-TV 243
Query: 245 EKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLL 293
+K T E ++S + ++ + + +G I ++ ++ I LL
Sbjct: 244 QKSSEFTKFEDELSKILNTDVKLVSNSKGRGNLQISFKNEKEFAAILELL 293
>gi|306826411|ref|ZP_07459725.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
pyogenes ATCC 10782]
gi|304431406|gb|EFM34401.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
pyogenes ATCC 10782]
Length = 258
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 90/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I IV NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 2 TKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 61
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L ++P II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 62 ERRLKASKMAGLKKIPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 121
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ SD +
Sbjct: 122 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLSDDKQQLYLT-- 179
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNK 273
+++ V++ + + K + T LEK+++ +GL++++K N+
Sbjct: 180 --HKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHS 237
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G I + +++L I + L
Sbjct: 238 GYLQISFSNDDELNRIINKLK 258
>gi|312279337|gb|ADQ63994.1| Stage 0 sporulation protein J [Streptococcus thermophilus ND03]
Length = 255
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 89/259 (34%), Positives = 141/259 (54%), Gaps = 7/259 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E +SI I PNP PR F E L +L QSI +G+IQP+IVR D Y++IAGE
Sbjct: 2 SEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA K ++E+P +++ V ++ S + AI+EN+QR +LNP+EEA Y LI E Y+
Sbjct: 62 RRLRACKRLGMTEIPAVVKEVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSH 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ +GKSR +++N LR+L+LP ++ I +S GHAR L++ D +
Sbjct: 122 EELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQGHARALLAIEDSRKQLTIFQQV 181
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKG 274
L ++ + +K+ ++ D EK++ +GL I+++ H+N+ G
Sbjct: 182 VAERWSVRTLEKKLQEL------PRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSG 235
Query: 275 QFCIKYETNEQLKIICSLL 293
I + T E I + L
Sbjct: 236 TIQIHFSTEEDFNRIINKL 254
>gi|331001489|ref|ZP_08325107.1| ParB-like protein [Parasutterella excrementihominis YIT 11859]
gi|329568218|gb|EGG50035.1| ParB-like protein [Parasutterella excrementihominis YIT 11859]
Length = 299
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 97/290 (33%), Positives = 167/290 (57%), Gaps = 7/290 (2%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
++ LG+ + ++ N + +PE + + + ++ P PRN E+ GL +L
Sbjct: 8 RKGLGKNMDSVFSMKNV---ADVIDNPKVPEPKSSLPLSALKPGKFQPRNDVENSGLAEL 64
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
QSIK +GI+ P++VR + + Y+I+AGERR++AAK+A L +VPV I +V +K ++ + +
Sbjct: 65 AQSIKQNGILNPIVVRKLSSDKYEILAGERRYQAAKIAGLKKVPVTILDVSDKQAMIVGL 124
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
VEN+QRKDLN LE A G ++LI E+ Y+ + +G+SR ++N+LR+L LP +V+ M+
Sbjct: 125 VENLQRKDLNALETAEGIQRLIEEFKYSHEGVAEAIGRSRPMISNLLRLLGLPEAVKTML 184
Query: 187 RKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
R EI +GHAR L + + LAQ I K +SVR TEE V ++ + + +
Sbjct: 185 RAGEIEMGHARALLSLPEEQQVWLAQQIKEKGLSVRQTEEYVARYKERENTSENPHK-TV 243
Query: 245 EKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCIKYETNEQLKIICSLL 293
+K T E ++S + ++ + + +G I ++ ++ I LL
Sbjct: 244 QKSSEFTKFEDELSKILNTDVKLVSNSKGRGNLQISFKNEKEFAAILELL 293
>gi|170783395|ref|YP_001711729.1| chromosome partitioning protein ParB [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157965|emb|CAQ03175.1| probable chromosome partitioning protein ParB [Clavibacter
michiganensis subsp. sepedonicus]
Length = 330
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 33/325 (10%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI--------------------------DSPEKKTET 34
M+ + LGRG+ ALI ++ S +
Sbjct: 1 MA--TKRTGLGRGIGALIPTSDERSRPVDVFFPDSIGAGAPSGVHQGDAQGTSEPELVAV 58
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA-----IDNGLY 89
+ I PN PR F E L++L SI+ +G++QP++VR Y
Sbjct: 59 PGARLANLDPADITPNAQQPRTDFRQEELQELMVSIREYGVLQPIVVRPLGADADGRARY 118
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+++ GERR RA K L +P +I++ ++S L A++EN+ R +LNPLEEA Y+QL++
Sbjct: 119 ELVMGERRLRATKELGLHTIPAVIKDTADESMLRDALLENLHRSELNPLEEASAYQQLLA 178
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
++ TQ+++ +G+SR + N +R+L+LP V+ + +S GHAR ++S+ D ++
Sbjct: 179 DFAITQDELAQRLGRSRPQITNTIRLLRLPEDVQHRVAAGVLSAGHARAILSSGDEDAMR 238
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH 269
+ ++ K + + +L + ++I + ++ +
Sbjct: 239 HLAEKIVNEDLSVRAAEAAAQRGQKATKPRKSSTSARNAHLDETAQRIGDHLNTSVRVTM 298
Query: 270 RNNKGQFCIKYETNEQLKIICSLLG 294
KGQ I + T L I +G
Sbjct: 299 SAQKGQIVIDFATVGDLTRIAQEMG 323
>gi|313889488|ref|ZP_07823134.1| putative stage 0 sporulation protein J [Streptococcus
pseudoporcinus SPIN 20026]
gi|313122100|gb|EFR45193.1| putative stage 0 sporulation protein J [Streptococcus
pseudoporcinus SPIN 20026]
Length = 257
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 86/259 (33%), Positives = 151/259 (58%), Gaps = 5/259 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E I + IV NPH PR +F+ E L++L SIK +G+IQP+IVR + Y++IAGER
Sbjct: 3 EELKEIRVEDIVANPHQPRLHFDYEELKELANSIKINGLIQPIIVRPSEIYGYELIAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R +A+++A L +VP +I+N+ S+ AIVEN+QR DLNP+EEA ++ ++++ T
Sbjct: 63 RLKASQLAGLEKVPAVIKNISTTESMHQAIVENLQRSDLNPIEEAKAFQNILTKKHLTHE 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ + +GKSR ++ N +R+L+LP + + + +IS GHAR+LV+ + +
Sbjct: 123 QLATFMGKSRPYITNSIRLLQLPDIILTALEEGKISSGHARSLVTLDNSQAQEDYF---- 178
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQ 275
+ D + V++ + + +K+ + ++ LE++++ +GL I IK + GQ
Sbjct: 179 HRIIDQDLSVRQTEQLVKLKKQAKKPQINTNIFIKALEEELAKSLGLPIHIKLKKDGSGQ 238
Query: 276 FCIKYETNEQLKIICSLLG 294
++ E+L I + L
Sbjct: 239 LSCFFQNEEELNRIINKLK 257
>gi|332662799|ref|YP_004445587.1| parB-like partition protein [Haliscomenobacter hydrossis DSM 1100]
gi|332331613|gb|AEE48714.1| parB-like partition protein [Haliscomenobacter hydrossis DSM 1100]
Length = 310
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 15/308 (4%)
Query: 1 MSNNYSKRRLGR---------GLAALIGEVNQSIDSPEKKTETIPESQD---CISIHSIV 48
M+ + G+ GL A+ + + + E I I I
Sbjct: 1 MAKKVIRTEAGKKVTRDNLSAGLRAVFNADTLNEAIAADQEAVVKELTHFTPMIPIEQIA 60
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
PNP PRN F+ E L++L SIK HG+IQP+ VR ++ Y+II+GERRFRA++ A + E
Sbjct: 61 PNPAQPRNQFDEEALDELANSIKVHGLIQPITVRLLEPNKYQIISGERRFRASQKAGIKE 120
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
VP +R ++ LE+A++EN+QR+DLN +E AL Y +L E T ++ S +GK RS
Sbjct: 121 VPAYVRLANDTEMLEMALIENIQRQDLNSIEVALTYARLKDECKLTDAELSSRMGKDRST 180
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
+ N LR+LKLP +V+ +R I+ GH R L S D + + L
Sbjct: 181 ITNYLRLLKLPDTVQTALRDRIITFGHGRALASVDDYVKSKGFFDLTMENHLSVRALENL 240
Query: 229 QDNKKEKRKKIFEGSREKEKY-LTDLEKKISSKVGL-NISIK-HRNNKGQFCIKYETNEQ 285
++K K + D++K+ G + +K + KGQ I + +
Sbjct: 241 IASEKSSTVKEGGKKASRLPDEYEDVQKRFREFFGAGKLQLKVNAEGKGQIIIPFGNTKD 300
Query: 286 LKIICSLL 293
L + L
Sbjct: 301 LNSLLDRL 308
>gi|28896773|ref|NP_803123.1| chromosome segregation protein [Streptococcus pyogenes SSI-1]
gi|28812027|dbj|BAC64956.1| putative chromosome segregation protein [Streptococcus pyogenes
SSI-1]
Length = 268
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 90/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I I+ NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 12 TKELLIDLPIEDIITNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 71
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 72 ERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 131
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ SD +
Sbjct: 132 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLSDDKQQLYLT-- 189
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNK 273
+++ V++ + + K + T LEK+++ +GL++++K N+
Sbjct: 190 --HKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHS 247
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G I + +++L I + L
Sbjct: 248 GYLQISFSNDDELNRIINKLK 268
>gi|55821992|ref|YP_140434.1| chromosome segregation protein [Streptococcus thermophilus LMG
18311]
gi|55823908|ref|YP_142349.1| chromosome segregation protein [Streptococcus thermophilus
CNRZ1066]
gi|55737977|gb|AAV61619.1| chromosome segregation protein [Streptococcus thermophilus LMG
18311]
gi|55739893|gb|AAV63534.1| chromosome segregation protein [Streptococcus thermophilus
CNRZ1066]
Length = 255
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 89/259 (34%), Positives = 141/259 (54%), Gaps = 7/259 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E +SI I PNP PR F E L +L QSI +G+IQP+IVR D Y++IAGE
Sbjct: 2 SEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA K ++E+P +++ V ++ S + AI+EN+QR +LNP+EEA Y LI E Y+
Sbjct: 62 RRLRACKRLGMTEIPAVVKEVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSH 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ +GKSR +++N LR+L+LP ++ I +S GHAR L++ D +
Sbjct: 122 EELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQGHARALLAIEDSRKQLTIFQQV 181
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKG 274
L ++ + +K+ ++ D EK++ +GL I+++ H+N+ G
Sbjct: 182 VAERWSVRTLEKKLQEL------PRKQKSKKDIHVKDKEKELERLLGLPITLRYHKNHSG 235
Query: 275 QFCIKYETNEQLKIICSLL 293
I + T E I + L
Sbjct: 236 TIQIHFSTEEDFNRIINKL 254
>gi|257455181|ref|ZP_05620416.1| chromosome segregation DNA-binding protein [Enhydrobacter
aerosaccus SK60]
gi|257447143|gb|EEV22151.1| chromosome segregation DNA-binding protein [Enhydrobacter
aerosaccus SK60]
Length = 387
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 78/262 (29%), Positives = 151/262 (57%), Gaps = 14/262 (5%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR------AIDNGLYKI 91
+ I++ + + PR + + L++L SIK HG++QP+++R ++I
Sbjct: 122 NLMHINVAYLQRGKYQPRLDLDEDALQELATSIKQHGVMQPIVIRPLAKVLPNSPITHEI 181
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
IAGERR+RAA++A L+ +P I+R + + ++ +A++EN+QR+DL+ +E+A ++ E+
Sbjct: 182 IAGERRWRAAQIAGLTHIPAIMRPMSDDLAIALALIENIQREDLSVMEQAAALQRFHDEF 241
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLA 209
G + + I +VGK+R+ V+N+LR+ +L V++ + + ++ +GHAR L +S +A
Sbjct: 242 GMSHSQIADVVGKARTTVSNLLRLNQLHDDVKQALNEGQMDMGHARALLALSPKQQPVIA 301
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH 269
+ I+ +++VR TE LV++ N K S+E + L + +S ++G + IK
Sbjct: 302 KKIIQGQLTVRQTEALVKDILN-----PKAPTQSQEIDYDRLRLNQHLSEQLGAVVKIKG 356
Query: 270 -RNNKGQFCIKYETNEQLKIIC 290
KG I + E+L+ +
Sbjct: 357 SSKGKGSIEIFFHNEEELQALI 378
>gi|270291829|ref|ZP_06198044.1| spspoJ protein [Streptococcus sp. M143]
gi|270279357|gb|EFA25199.1| spspoJ protein [Streptococcus sp. M143]
Length = 252
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 83/259 (32%), Positives = 147/259 (56%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ + L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISISDIQKNPYQPRKEFDVKKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L+ +P +++++ ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLTSIPAVVKHLSDQEMMIQSIIENLQRENLNPIEEARAYESLVEK-GFTHT 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR ++ N +R+L LP + + +IS HAR+LV + K
Sbjct: 121 EIADKMGKSRPYITNFIRLLSLPEHILAEVENGKISQAHARSLVGLDKEQQEYFFQLIKN 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + + +K + ++ + ++ D E K+ +GLN+ IK + + G+
Sbjct: 181 ED-------ISVRKLETLLTEKKQKKQKKSDSFIKDEEDKLKKLLGLNVEIKLSKKDTGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + + E+ I + L
Sbjct: 234 VIISFSSQEEYDRIINSLK 252
>gi|21911401|ref|NP_665669.1| putative chromosome segregation protein [Streptococcus pyogenes
MGAS315]
gi|21905617|gb|AAM80472.1|AE014172_51 putative chromosome segregation protein [Streptococcus pyogenes
MGAS315]
Length = 258
Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 90/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I I+ NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 2 TKELLIDLPIEDIITNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 61
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 62 ERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 121
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ SD +
Sbjct: 122 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLSDDKQQLYLT-- 179
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNK 273
+++ V++ + + K + T LEK+++ +GL++++K N+
Sbjct: 180 --HKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHS 237
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G I + +++L I + L
Sbjct: 238 GYLQISFSNDDELNRIINKLK 258
>gi|152990970|ref|YP_001356692.1| chromosome partitioning protein ParB [Nitratiruptor sp. SB155-2]
gi|151422831|dbj|BAF70335.1| chromosome partitioning protein ParB [Nitratiruptor sp. SB155-2]
Length = 281
Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 96/294 (32%), Positives = 163/294 (55%), Gaps = 15/294 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LG+GL +++GEV ++ + + E I I I NP+ PR YF+
Sbjct: 3 MS---KKKSLGKGLGSILGEVAEAYEKELPQNE----EVVEIEIDQIRKNPYQPRRYFDE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L +L +SI+SHG++QP++V D + +IAGERR RA+K+A L + I+ VD
Sbjct: 56 KALHELAESIRSHGLLQPIVVIE-DIDGFMLIAGERRLRASKLAGLKTIKAIVAKVDKNK 114
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E A++EN+QR++L PLE A Y++LI EYG T ++ +IV KSR+H+ N LR+L+L
Sbjct: 115 YREFALIENIQRENLTPLELAQSYKELIEEYGITHEELANIVKKSRTHITNTLRLLQLSD 174
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
++ + + +I+ GHA+ +V + ++V + R + V++ K+K
Sbjct: 175 YAQKALGEGKITFGHAKVIVGLDEKEQQ--IMVDSIIGQRLSVRDVEKYIQNKKKSVSKG 232
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+R+ E L L+ +++ +G IK I ++ +E++K LL
Sbjct: 233 TKTRKNEIDLNGLKTRLTE-LGFTAKIKKDG----VLIAFDNDEEVKRFIDLLK 281
>gi|317130997|ref|YP_004097279.1| parB-like partition protein [Bacillus cellulosilyticus DSM 2522]
gi|315475945|gb|ADU32548.1| parB-like partition protein [Bacillus cellulosilyticus DSM 2522]
Length = 284
Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 97/291 (33%), Positives = 165/291 (56%), Gaps = 15/291 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ + + + I I + PNP+ PR FE + +E+L
Sbjct: 3 KGLGKGINVFFPD----------NIDEKKDKIQEIEISELRPNPYQPRKNFEEDAIEELK 52
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SI+ HG++QP+I R Y+I+ GERR+RAAK A+LS +P ++R + + +EIA++
Sbjct: 53 TSIEQHGVLQPIIARK-SIKGYEIVVGERRYRAAKAANLSVIPAVVRKLTEEEMMEIALI 111
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR++LNPLEEA Y++L+ + TQ ++ +GKSR H+AN +R+L+LPS +E+I
Sbjct: 112 ENLQRENLNPLEEAKAYQKLMEQLNVTQEELSKKLGKSRPHIANHVRLLQLPSLAQELIA 171
Query: 188 KEEISLGHARTLVSTSDPL---SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ ++S+GH R L+ + + +V++K++VR EELVQ + + K +
Sbjct: 172 EGKLSMGHGRALLGLKRKELLSNTLKKVVNEKLNVRQVEELVQRLNENVSRETKSKKKDT 231
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
++ + E + G N+ IK KG+ I++ + E L I L+ E
Sbjct: 232 N-SPFIRERESHLKEYFGTNVQIKKGKKKGKIEIEFFSEEDLDRILQLINE 281
>gi|94995375|ref|YP_603473.1| chromosome partitioning protein parB [Streptococcus pyogenes
MGAS10750]
gi|94548883|gb|ABF38929.1| Chromosome partitioning protein parB [Streptococcus pyogenes
MGAS10750]
Length = 268
Score = 115 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 91/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I IV NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 12 TKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 71
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 72 ERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 131
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ SD +
Sbjct: 132 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLSDDKQQLYLT-- 189
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNK 273
+++ V++ + + K + T LEK+++ +GL++++K N+
Sbjct: 190 --HKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATYLEKQLAKSLGLSVNMKLTANHS 247
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G I + +++L I + L
Sbjct: 248 GYLQISFSNDDELNRIINKLK 268
>gi|224438548|ref|ZP_03659468.1| transcriptional regulator involved in chromosome partitioning ParB
[Helicobacter cinaedi CCUG 18818]
gi|313144974|ref|ZP_07807167.1| transcriptional regulator [Helicobacter cinaedi CCUG 18818]
gi|313130005|gb|EFR47622.1| transcriptional regulator [Helicobacter cinaedi CCUG 18818]
Length = 295
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 98/303 (32%), Positives = 176/303 (58%), Gaps = 20/303 (6%)
Query: 5 YSKRRL--GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
+K++L GRGL A++ E ++ + ++ + I I PNP+ PR F E
Sbjct: 1 MAKKKLAIGRGLGAILAETAEAYEQNLSDNSSL---VLDLDIDIIKPNPYQPRKTFNQEA 57
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
L++L +SIK HG++QP++V +G Y +IAGERR RA+K+A LS + I+ ++ K
Sbjct: 58 LQELSESIKEHGLLQPIVVYDNGDGDYVLIAGERRLRASKLAGLSNIRAIVAEIEQKKMR 117
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+AI+EN+QR++LN +E AL Y++L+ EY T ++ + KSR+ + N LR+L+L V
Sbjct: 118 ELAIIENIQREELNAIELALSYQELLEEYDITHEELSKRINKSRTQITNTLRLLQLCDEV 177
Query: 183 REMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKR---- 236
+ M+ +E+I+ GHA+ LV+ S+ A I+ +++SVRDTE L+++ N ++
Sbjct: 178 KTMLGEEKITQGHAKMLVTLSESEQKLVADSIIGQRLSVRDTETLIKKLKNGQDSTAKDS 237
Query: 237 -KKIFEGSREKEKYLTDLEK---KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
K + K ++ LE+ ++SS +G I+ N + I ++++ ++ +
Sbjct: 238 ISKAKPKGQAKSLDISLLEELRMELSS-LG----IQSSINATKLSIDFKSDAEITTLLKK 292
Query: 293 LGE 295
+ +
Sbjct: 293 IAK 295
>gi|148274155|ref|YP_001223716.1| putative chromosome partitioning protein [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147832085|emb|CAN03058.1| putative chromosome partitioning protein [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 329
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 32/329 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDS-------------------------PEKKTETI 35
M+ + LGRG+ ALI ++ +
Sbjct: 1 MA--TKRTGLGRGIGALIPTSDERSRPVDVFFPDSIGAGAPSGVQGDAQGKGEPELVAVP 58
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA-----IDNGLYK 90
+ I PN PR F + L++L SI+ +G++QP++VR Y+
Sbjct: 59 GARLANLDPADITPNAQQPRTDFRQDELQELMVSIREYGVLQPIVVRPLGADADGRARYE 118
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
++ GERR RA K L +P +I++ ++S L A++EN+ R +LNPLEEA Y+QL+++
Sbjct: 119 LVMGERRLRATKELGLDTIPAVIKDTADESMLRDALLENLHRSELNPLEEASAYQQLLAD 178
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQ 210
+ TQ+++ +G+SR + N +R+L+LP V+ + +S GHAR ++S+ D ++
Sbjct: 179 FAITQDELAQRLGRSRPQITNTIRLLRLPEDVQHRVAAGVLSAGHARAILSSGDDEAMRH 238
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+ + K S + +L D ++I + ++ +
Sbjct: 239 LAEKIVNEDLSVRAAEAAAQRGQRTSKPRKSASSARNAHLDDTAQRIGDHLNTSVRVTMS 298
Query: 271 NNKGQFCIKYETNEQLKIICSLLGENDFE 299
KGQ I + T L I +G D +
Sbjct: 299 AQKGQIVIDFATVGDLTRIAQEMGVPDAD 327
>gi|326561360|gb|EGE11716.1| ParB-like chromosome partitioning protein [Moraxella catarrhalis
46P47B1]
Length = 346
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 93/344 (27%), Positives = 163/344 (47%), Gaps = 62/344 (18%)
Query: 6 SKRRLG--RGLAALIGEVNQSID-----------SPEKKTETIPES-------------- 38
KR LG RGL AL+G ++ + ++TET P +
Sbjct: 3 KKRGLGINRGLDALLGNISAEKKIIAGAQSLVAGAASEQTETKPTASKKTTKINKATADK 62
Query: 39 ------------------QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
I+ + + + PR L +L SIK HG++QP++
Sbjct: 63 KAGNNNPALEAGVGKQVALVQIATNRLQSGKYQPRRDMNEAALNELSLSIKQHGVMQPIV 122
Query: 81 VRA--------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+R D ++IIAGERR+RAAK+A L +P I R + ++ ++ +A++EN+QR
Sbjct: 123 IRPLLSDESKSSDTVTHEIIAGERRWRAAKLAGLESIPAIERVLSDEVAIALALIENIQR 182
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
+DLN LE+A ++ +E+G + I S+VGK+R+ V+N++R+ L V++ + +
Sbjct: 183 EDLNVLEQAAALQRFHTEFGMSHAMIASVVGKARTTVSNLMRLNHLHDQVKQYMIDGVMD 242
Query: 193 LGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
+GHAR L +S +A+ IV M+VRD E LV+ + + + +
Sbjct: 243 MGHARALLSLSQEQQPIIAKKIVDGGMTVRDAERLVKSILD------PNPKLIVQPNHEV 296
Query: 251 TDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
L ++IS +G + +K KG I + +++ + + L
Sbjct: 297 LALSQQISDALGAKVKLKQGKDGKGSVEIFFYDHDEFGELVNRL 340
>gi|332522331|ref|ZP_08398583.1| stage 0 sporulation protein J [Streptococcus porcinus str.
Jelinkova 176]
gi|332313595|gb|EGJ26580.1| stage 0 sporulation protein J [Streptococcus porcinus str.
Jelinkova 176]
Length = 257
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 87/259 (33%), Positives = 150/259 (57%), Gaps = 5/259 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E I I IV NPH PR +F E L++L SIK +G+IQP+IVR + Y++IAGER
Sbjct: 3 EELKEIKIEDIVANPHQPRLHFNHEELKELANSIKINGLIQPIIVRPSEIYGYELIAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R +A+++A L +VP +I+N+ S+ AIVEN+QR DLNP+EEA ++ ++++ T
Sbjct: 63 RLKASQLAGLEKVPAVIKNISTTESMHQAIVENLQRSDLNPIEEAKAFQNILTKNQLTHE 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ + +GKSR ++ N +R+L+LP + + + +IS GHAR+LV+ +
Sbjct: 123 QLATFMGKSRPYITNSIRLLQLPDIILTALEEGKISTGHARSLVTLNKSQDQENYF---- 178
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQ 275
+ + + V++ + + +KK + K+ ++ LE++++ +GL I +K + GQ
Sbjct: 179 RRIIEQDLSVRQTEQLVKLKKKTKKQQMNKDIFIKALEEELAKSLGLTIHVKLKKDGSGQ 238
Query: 276 FCIKYETNEQLKIICSLLG 294
+ E+L I + L
Sbjct: 239 LSCLFNNEEELNRIINKLK 257
>gi|76787490|ref|YP_330723.1| ParB family chromosome partioning protein [Streptococcus agalactiae
A909]
gi|77405629|ref|ZP_00782718.1| partitioning protein, ParB family [Streptococcus agalactiae H36B]
gi|76562547|gb|ABA45131.1| chromosome partition protein, ParB family [Streptococcus agalactiae
A909]
gi|77175773|gb|EAO78553.1| partitioning protein, ParB family [Streptococcus agalactiae H36B]
Length = 257
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 86/259 (33%), Positives = 145/259 (55%), Gaps = 4/259 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + I+I+ I PNP+ PR F ++ LE+L SIK +G+IQP+IVR Y+++AGER
Sbjct: 2 EYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RAAK+A L +P II++ +N S+++AIVEN+QR +L+P+EEA Y QL+ + T
Sbjct: 62 RLRAAKLAKLESIPAIIKSYNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHE 121
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ +GKSR +++N +R+L LP + I + ++S GHAR L+S D
Sbjct: 122 ELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGHARALLSLPDASQQKDWYQRIL 181
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
L + +K+ K + K+ +L E +++ +G + + +++ G
Sbjct: 182 TEDISVRRLEKLLKQEKKTNHKSL---QNKDVFLKHQENELAQFLGSKVKLTINKDGAGN 238
Query: 276 FCIKYETNEQLKIICSLLG 294
I + ++L I + L
Sbjct: 239 IKIAFANQKELNRIINTLK 257
>gi|322390523|ref|ZP_08064041.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis
ATCC 903]
gi|321142797|gb|EFX38257.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis
ATCC 903]
Length = 253
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 90/259 (34%), Positives = 150/259 (57%), Gaps = 8/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + I++ I NP PR F+ E LE+L QSIK +G+IQP+IVR ++++AGER
Sbjct: 2 EKLEKIAVKDIRTNPFQPRKVFDQEKLEELAQSIKENGLIQPIIVRKSPIIGFELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRA+K+A L VP II+ + ++ + AI+EN+QR+DLNP+EEA+ Y++L ++GY +
Sbjct: 62 RFRASKIAGLELVPAIIKELTDQEMMRQAIIENLQREDLNPIEEAISYQKL-VDHGYKHD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
I +GKSR +++N+LR+L L SV+E + + +IS HAR LV + +
Sbjct: 121 QIAQFMGKSRPYISNMLRLLHLAPSVQEAVIQNDISSAHARVLVPLDEEEQRFWLERI-- 178
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQ 275
+ L K K+ + + KE +L + E+++ +G +++I NKG
Sbjct: 179 ----KQDHLNVRTLESKISSKRKQKKQKAKESFLLEEEQRLKKILGTDVTIHSSSQNKGT 234
Query: 276 FCIKYETNEQLKIICSLLG 294
I + + ++ + I + L
Sbjct: 235 IQISFSSLDEYQRIINSLK 253
>gi|71904561|ref|YP_281364.1| chromosome partitioning protein [Streptococcus pyogenes MGAS6180]
gi|71803656|gb|AAX73009.1| chromosome partitioning protein [Streptococcus pyogenes MGAS6180]
Length = 268
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 91/260 (35%), Positives = 151/260 (58%), Gaps = 5/260 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + I IV NP+ PR F L+DL SIKS+G+IQP+IVR D Y+++AG
Sbjct: 12 TKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAG 71
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR +A+KMA L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T
Sbjct: 72 ERRLKASKMAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMT 131
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
++I +GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ SD +
Sbjct: 132 HDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLSDDKQQLYLT-- 189
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNK 273
+++ V++ + + K + T LEK+++ +GL++++K N+
Sbjct: 190 --HKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHS 247
Query: 274 GQFCIKYETNEQLKIICSLL 293
G I + +++L I + L
Sbjct: 248 GYLQISFSNDDELNRIINKL 267
>gi|213693338|ref|YP_002323924.1| parB-like partition protein [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|213524799|gb|ACJ53546.1| parB-like partition protein [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320459520|dbj|BAJ70141.1| putative chromosome partitioning protein ParB [Bifidobacterium
longum subsp. infantis ATCC 15697]
Length = 453
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
D ++ + + I PN H PR F+ + L +L SIK G++QP++VR
Sbjct: 143 ADTDKKDELKPVAGGYLAELKLSDIGPNAHQPRTIFDEDELNELSASIKEVGVLQPIVVR 202
Query: 83 AID--------------------------NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ Y++I GERR+RA+++A L +P I++
Sbjct: 203 KRPASRIAAAKAAKHDETESSTNPFAGHLDSPYELIMGERRWRASQLAGLETIPAIVKTT 262
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ L A++EN+ R LNPLEEA Y+Q+I E+G TQ + V KSR +AN LR+L
Sbjct: 263 ADDDMLRDALLENLHRVALNPLEEAAAYQQMIEEFGLTQAQLSKSVSKSRPQIANTLRLL 322
Query: 177 KLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
LP+SV++ + +S GHAR L + LA I+++ +SVR TEE+V
Sbjct: 323 NLPASVQKRVAAGVLSSGHARALLGLSDPEEMDKLASRIIAEGLSVRSTEEIVA-MKVAS 381
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ K + S+ + +++ + + +SIK G+ I + + E + I LL
Sbjct: 382 GEQPKKPKTSKTNPWVGSAIQQSLENHFDTKVSIKGSTKHGRIEIVFSSPEDMDRILQLL 441
>gi|291517739|emb|CBK71355.1| chromosome segregation DNA-binding protein [Bifidobacterium longum
subsp. longum F8]
Length = 424
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
D ++ + + I PN H PR F+ + L +L SIK G++QP++VR
Sbjct: 114 ADTDKKDELKPVAGGYLAELKLSDIGPNAHQPRTIFDEDELNELSASIKEVGVLQPIVVR 173
Query: 83 AID--------------------------NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ Y++I GERR+RA+++A L +P I++
Sbjct: 174 KRPASQIAAAKAAKHDETESSTNPFAGHLDSPYELIMGERRWRASQLAGLETIPAIVKTT 233
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ L A++EN+ R LNPLEEA Y+Q+I E+G TQ + V KSR +AN LR+L
Sbjct: 234 ADDDMLRDALLENLHRVALNPLEEAAAYQQMIEEFGLTQVQLSKSVSKSRPQIANTLRLL 293
Query: 177 KLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
LP+SV++ + +S GHAR L + LA I+++ +SVR TEE+V
Sbjct: 294 NLPASVQKRVAAGVLSSGHARALLGLSDPEEMDKLASRIITEGLSVRSTEEIVA-MKIAS 352
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ K + S+ + +++ + + +SIK G+ I + + E + I LL
Sbjct: 353 GEQPKKPKTSKTNPWVGSAIQQSLENHFDTKVSIKGSTKHGRIEIVFSSPEDMDRILQLL 412
>gi|239918799|ref|YP_002958357.1| ParB-like partition protein [Micrococcus luteus NCTC 2665]
gi|239840006|gb|ACS31803.1| ParB-like partition protein [Micrococcus luteus NCTC 2665]
Length = 268
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 88/253 (34%), Positives = 136/253 (53%), Gaps = 5/253 (1%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI-IAGERRFRAAKMA 104
I PNP PR F+ + + +L SI+ GI+QP++VR +D I GERR+RA + A
Sbjct: 3 DIHPNPRQPREVFDEDHMAELVTSIREVGILQPIVVREVDGPTPYELIMGERRWRATQKA 62
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
L +P I+R ++ L A++EN+ R LNPLEEA Y+QL+ ++ TQ ++ +G+
Sbjct: 63 GLDTIPAIVRQTPDQDLLRDALLENLHRSQLNPLEEAAAYQQLMEDFACTQEELSQRIGR 122
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRD 221
SR ++N LR+LKLP V+ + +S GHAR L SD LAQ I S+ +SVR
Sbjct: 123 SRPQISNTLRLLKLPPLVQRRVAAGTLSAGHARALLGLTDPSDMERLAQRIQSEGLSVRS 182
Query: 222 TEELVQEQDNKKEKRKKIFEGSRE-KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKY 280
TEE V + + + + + + L ++S++ + I KG+ I +
Sbjct: 183 TEEAVAQLQGGLRPGRTPRRSTDDARHERLDHYATALTSRLDTAVKITLGARKGRIAIDF 242
Query: 281 ETNEQLKIICSLL 293
T E L I L+
Sbjct: 243 TTVEDLNRIMDLI 255
>gi|146322038|ref|YP_001201749.1| transcriptional regulator [Streptococcus suis 98HAH33]
gi|145692844|gb|ABP93349.1| Predicted transcriptional regulator [Streptococcus suis 98HAH33]
Length = 254
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 86/256 (33%), Positives = 151/256 (58%), Gaps = 7/256 (2%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E ++I I PNP+ PR +F+ + L +L QSIK +G+IQP+IVR Y+++AGER
Sbjct: 2 EELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RA+++A L+ +P +++ + + L AI+EN+QR +LNP+EEA Y++LIS T +
Sbjct: 62 RLRASQLAGLTTIPAVVKELTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ I+GKSR +++N+LR+L L S ++ + + +IS GHAR LVS S+ V++
Sbjct: 121 EVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHARQLVSFSEEKQAEWVLLILS 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQ 275
+ V+ + KK ++++++L + E +S +G IK +N G+
Sbjct: 181 KDLS-----VRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGE 235
Query: 276 FCIKYETNEQLKIICS 291
I + ++ + I +
Sbjct: 236 IRISFNDLDEFERIIN 251
>gi|322692111|ref|YP_004221681.1| chromosome partitioning protein ParB [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456967|dbj|BAJ67589.1| putative chromosome partitioning protein ParB [Bifidobacterium
longum subsp. longum JCM 1217]
Length = 453
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
D ++ + + I PN H PR F+ + L +L SIK G++QP++VR
Sbjct: 143 ADTDKKDELKPVAGGYLAELKLSDIGPNAHQPRTIFDEDELNELSASIKEVGVLQPIVVR 202
Query: 83 AID--------------------------NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ Y++I GERR+RA+++A L +P I++
Sbjct: 203 KRPASQIAAAKAAKHDETESSTNPFAGHLDSPYELIMGERRWRASQLAGLETIPAIVKTT 262
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ L A++EN+ R LNPLEEA Y+Q+I E+G TQ + V KSR +AN LR+L
Sbjct: 263 ADDDMLRDALLENLHRVALNPLEEAAAYQQMIEEFGLTQVQLSKSVSKSRPQIANTLRLL 322
Query: 177 KLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
LP+SV++ + +S GHAR L + LA I+++ +SVR TEE+V
Sbjct: 323 NLPASVQKRVAAGVLSSGHARALLGLSDPEEMDKLASRIIAEGLSVRSTEEIVA-MKIAS 381
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ K + S+ + +++ + + +SIK G+ I + + E + I LL
Sbjct: 382 GEQPKKPKTSKTNPWVGSAIQQSLENHFDTKVSIKGSTKHGRIEIVFSSPEDMDRILQLL 441
>gi|296455139|ref|YP_003662283.1| parB-like partition protein [Bifidobacterium longum subsp. longum
JDM301]
gi|296184571|gb|ADH01453.1| parB-like partition protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 453
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
D ++ + + I PN H PR F+ + L +L SIK G++QP++VR
Sbjct: 143 ADTDKKDELKPVAGGYLAELKLSDIGPNAHQPRTIFDEDELNELSASIKEVGVLQPIVVR 202
Query: 83 AID--------------------------NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ Y++I GERR+RA+++A L +P I++
Sbjct: 203 KRPASRIAAAKAAKHDETESSTNPFAGHLDSPYELIMGERRWRASQLAGLETIPAIVKTT 262
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ L A++EN+ R LNPLEEA Y+Q+I E+G TQ + V KSR +AN LR+L
Sbjct: 263 ADDDMLRDALLENLHRVALNPLEEAAAYQQMIEEFGLTQVQLSKSVSKSRPQIANTLRLL 322
Query: 177 KLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
LP+SV++ + +S GHAR L + LA I+++ +SVR TEE+V
Sbjct: 323 NLPASVQKRVAAGVLSSGHARALLGLSDPEEMDKLASRIIAEGLSVRSTEEIVA-MKIAS 381
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ K + S+ + +++ + + +SIK G+ I + + E + I LL
Sbjct: 382 GEQPKKPKTSKTNPWVGSAIQQSLENHFDTKVSIKGSTKHGRIEIVFSSPEDMDRILQLL 441
>gi|239622851|ref|ZP_04665882.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|317482351|ref|ZP_07941371.1| ParB-like partition protein [Bifidobacterium sp. 12_1_47BFAA]
gi|322690176|ref|YP_004209910.1| chromosome partitioning protein ParB [Bifidobacterium longum subsp.
infantis 157F]
gi|239514848|gb|EEQ54715.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|316916231|gb|EFV37633.1| ParB-like partition protein [Bifidobacterium sp. 12_1_47BFAA]
gi|320461512|dbj|BAJ72132.1| putative chromosome partitioning protein ParB [Bifidobacterium
longum subsp. infantis 157F]
Length = 453
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
D ++ + + I PN H PR F+ + L +L SIK G++QP++VR
Sbjct: 143 ADTDKKDELKPVAGGYLAELKLSDIGPNAHQPRTIFDEDELNELSASIKEVGVLQPIVVR 202
Query: 83 AID--------------------------NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ Y++I GERR+RA+++A L +P I++
Sbjct: 203 KRPASQIAAAKAAKHDETESSTNPFAGHLDSPYELIMGERRWRASQLAGLETIPAIVKTT 262
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ L A++EN+ R LNPLEEA Y+Q+I E+G TQ + V KSR +AN LR+L
Sbjct: 263 ADDDMLRDALLENLHRVALNPLEEAAAYQQMIEEFGLTQVQLSKSVSKSRPQIANTLRLL 322
Query: 177 KLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
LP+SV++ + +S GHAR L + LA I+++ +SVR TEE+V
Sbjct: 323 NLPASVQKRVAAGVLSSGHARALLGLSDPEEMDKLASRIIAEGLSVRSTEEIVA-MKIAS 381
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ K + S+ + +++ + + +SIK G+ I + + E + I LL
Sbjct: 382 GEQPKKPKTSKTNPWVGSAIQQSLENHFDTKVSIKGSTKHGRIEIVFSSPEDMDRILQLL 441
>gi|227547520|ref|ZP_03977569.1| stage 0 DNA-binding protein [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|227212035|gb|EEI79931.1| stage 0 DNA-binding protein [Bifidobacterium longum subsp. infantis
ATCC 55813]
Length = 453
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
D ++ + + I PN H PR F+ + L +L SIK G++QP++VR
Sbjct: 143 ADTDKKDELKPVAGGYLAELKLSDIGPNAHQPRTIFDEDELNELSASIKEVGVLQPIVVR 202
Query: 83 AID--------------------------NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ Y++I GERR+RA+++A L +P I++
Sbjct: 203 KRPASQIAAAKAAKHDETESSTNPFAGHLDSPYELIMGERRWRASQLAGLETIPAIVKTT 262
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ L A++EN+ R LNPLEEA Y+Q+I E+G TQ + V KSR +AN LR+L
Sbjct: 263 ADDDMLRDALLENLHRVALNPLEEAAAYQQMIEEFGLTQVQLSKSVSKSRPQIANTLRLL 322
Query: 177 KLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
LP+SV++ + +S GHAR L + LA I+++ +SVR TEE+V
Sbjct: 323 NLPASVQKRVAAGVLSSGHARALLGLSDPEEMDKLASRIIAEGLSVRSTEEIVA-MKIAS 381
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ K + S+ + +++ + + +SIK G+ I + + E + I LL
Sbjct: 382 GEQPKKPKTSKTNPWVGSAIQQSLENHFDTKVSIKGSTKHGRIEIVFSSPEDMDRILQLL 441
>gi|189440305|ref|YP_001955386.1| putative transcriptional regulator [Bifidobacterium longum DJO10A]
gi|312133639|ref|YP_004000978.1| transcriptional regulator [Bifidobacterium longum subsp. longum
BBMN68]
gi|189428740|gb|ACD98888.1| Putative transcriptional regulator [Bifidobacterium longum DJO10A]
gi|311772898|gb|ADQ02386.1| Putative transcriptional regulator [Bifidobacterium longum subsp.
longum BBMN68]
Length = 424
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
D ++ + + I PN H PR F+ + L +L SIK G++QP++VR
Sbjct: 114 ADTDKKDELKPVAGGYLAELKLSDIGPNAHQPRTIFDEDELNELSASIKEVGVLQPIVVR 173
Query: 83 AID--------------------------NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ Y++I GERR+RA+++A L +P I++
Sbjct: 174 KRPASQIAAAKAAKHDETESSTNPFAGHLDSPYELIMGERRWRASQLAGLETIPAIVKTT 233
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ L A++EN+ R LNPLEEA Y+Q+I E+G TQ + V KSR +AN LR+L
Sbjct: 234 ADDDMLRDALLENLHRVALNPLEEAAAYQQMIEEFGLTQVQLSKSVSKSRPQIANTLRLL 293
Query: 177 KLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
LP+SV++ + +S GHAR L + LA I+++ +SVR TEE+V
Sbjct: 294 NLPASVQKRVAAGVLSSGHARALLGLSDPEEMDKLASRIIAEGLSVRSTEEIVA-MKIAS 352
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ K + S+ + +++ + + +SIK G+ I + + E + I LL
Sbjct: 353 GEQPKKPKTSKTNPWVGSAIQQSLENHFDTKVSIKGSTKHGRIEIVFSSPEDMDRILQLL 412
>gi|23465231|ref|NP_695834.1| chromosome partitioning protein [Bifidobacterium longum NCC2705]
gi|23325860|gb|AAN24470.1| probable chromosome partitioning protein [Bifidobacterium longum
NCC2705]
Length = 453
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
D ++ + + I PN H PR F+ + L +L SIK G++QP++VR
Sbjct: 143 ADTDKKDELKPVAGGYLAELKLSDIGPNAHQPRTIFDEDELNELSASIKEVGVLQPIVVR 202
Query: 83 AID--------------------------NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ Y++I GERR+RA+++A L +P I++
Sbjct: 203 KRPASQIAAAKAAKHDETESSTNPFAGHLDSPYELIMGERRWRASQLAGLETIPAIVKTT 262
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ L A++EN+ R LNPLEEA Y+Q+I E+G TQ + V KSR +AN LR+L
Sbjct: 263 ADDDMLRDALLENLHRVALNPLEEAAAYQQMIEEFGLTQVQLSKSVSKSRPQIANTLRLL 322
Query: 177 KLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
LP+SV++ + +S GHAR L + LA I+++ +SVR TEE+V
Sbjct: 323 NLPASVQKRVAAGVLSSGHARALLGLSDPEEMDKLASRIIAEGLSVRSTEEIVA-MKIAS 381
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ K + S+ + +++ + + +SIK G+ I + + E + I LL
Sbjct: 382 GEQPKKPKTSKTNPWVGSAIQQSLENHFDTKVSIKGSTKHGRIEIVFSSPEDMDRILQLL 441
>gi|46190724|ref|ZP_00206550.1| COG1475: Predicted transcriptional regulators [Bifidobacterium
longum DJO10A]
Length = 319
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
D ++ + + I PN H PR F+ + L +L SIK G++QP++VR
Sbjct: 9 ADTDKKDELKPVAGGYLAELKLSDIGPNAHQPRTIFDEDELNELSASIKEVGVLQPIVVR 68
Query: 83 AID--------------------------NGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
+ Y++I GERR+RA+++A L +P I++
Sbjct: 69 KRPASQIAAAKAAKHDETESSTNPFAGHLDSPYELIMGERRWRASQLAGLETIPAIVKTT 128
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ L A++EN+ R LNPLEEA Y+Q+I E+G TQ + V KSR +AN LR+L
Sbjct: 129 ADDDMLRDALLENLHRVALNPLEEAAAYQQMIEEFGLTQVQLSKSVSKSRPQIANTLRLL 188
Query: 177 KLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
LP+SV++ + +S GHAR L + LA I+++ +SVR TEE+V
Sbjct: 189 NLPASVQKRVAAGVLSSGHARALLGLSDPEEMDKLASRIIAEGLSVRSTEEIVA-MKIAS 247
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ K + S+ + +++ + + +SIK G+ I + + E + I LL
Sbjct: 248 GEQPKKPKTSKTNPWVGSAIQQSLENHFDTKVSIKGSTKHGRIEIVFSSPEDMDRILQLL 307
>gi|312130782|ref|YP_003998122.1| parb-like partition protein [Leadbetterella byssophila DSM 17132]
gi|311907328|gb|ADQ17769.1| parB-like partition protein [Leadbetterella byssophila DSM 17132]
Length = 284
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 95/288 (32%), Positives = 161/288 (55%), Gaps = 12/288 (4%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
G+GL +L+G+ + + + + IV PR F+ L +L SI
Sbjct: 5 GKGLNSLLGDSDLVVKRKVAAFV----GVKEVEVDRIVVGSSQPRKSFDESALRELADSI 60
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
K G+IQP+ VR G +II+GERRFRA+K+A L+ +P IR VD++ SLE+A++EN+
Sbjct: 61 KLQGLIQPITVRETSEGKLEIISGERRFRASKLAGLTRIPAYIREVDDQRSLEMALIENI 120
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
QR++LNP+E AL Y +++ E G+ Q D+G VGKSRS++ N LR+L+LP+ ++ +
Sbjct: 121 QRENLNPIEIALSYRRMMEELGFRQEDLGQRVGKSRSNITNFLRLLQLPTEIQTGLVLGV 180
Query: 191 ISLGHARTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+++G R L+ +D + + Q I+ +S R+ E LV+ + + + ++
Sbjct: 181 VTVGQVRPLIPVNDPSLQMDIYQKILEDNLSAREVEALVKRGNAFEAQANELEMHR---- 236
Query: 248 KYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLLG 294
+ + E + K + I IK ++ NKGQ I++ + L+ I L
Sbjct: 237 EDMRIEEMTLKGKTKVPIKIKVQDINKGQVTIRFSNADDLEKILQKLK 284
>gi|218297063|ref|ZP_03497740.1| parB-like partition protein [Thermus aquaticus Y51MC23]
gi|218242618|gb|EED09155.1| parB-like partition protein [Thermus aquaticus Y51MC23]
Length = 268
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 102/282 (36%), Positives = 154/282 (54%), Gaps = 29/282 (10%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS S LGRGL AL+ + + +I PNP PR F
Sbjct: 1 MSKKAS--GLGRGLEALLP--------------KGGGGVVRLPLSAIRPNPGQPRRRFSQ 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L QSI+ G++QP++VR +G Y+++AGERR+RAA+MA L+EVP ++R++ ++
Sbjct: 45 ESLEELAQSIREKGLLQPILVRPKGDG-YELVAGERRYRAAQMAGLTEVPALVRDLTDRE 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+A+VEN+QR+DL+PLEEA GY+ L+S G TQ ++ VGK+RS VAN LR+L+LP
Sbjct: 104 ALELALVENLQREDLSPLEEARGYQALLS-MGLTQEEVAKRVGKARSTVANALRLLQLPE 162
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V + EI+ GHAR L+ L + + L Q +R
Sbjct: 163 EVLRALEAGEITAGHARALLMLEPEDRLWGLKEILEKG------LSVRQAEALRERLGRE 216
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYET 282
+G +E L ++S +GL + + +G+ I Y +
Sbjct: 217 KGPKEPSP----LSLELSRHLGLPVKV-LGGRRGRVVIHYRS 253
>gi|302334810|ref|YP_003800017.1| parB-like partition protein [Olsenella uli DSM 7084]
gi|301318650|gb|ADK67137.1| parB-like partition protein [Olsenella uli DSM 7084]
Length = 275
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 94/256 (36%), Positives = 157/256 (61%), Gaps = 8/256 (3%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
+SI I N + PR F+ + LE+L SI+ +GI+QP++VR Y+I+AGERR++AA
Sbjct: 17 LSISRIKANRNQPRKNFDPDALEELADSIRQNGILQPILVRKKGKD-YEIVAGERRYQAA 75
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
K A L EVPV+IR+++++ ++A++EN+QR DL+P+EEALGY++LI + G+TQ ++G
Sbjct: 76 KKAGLKEVPVVIRDIEDEEVFKLALIENLQRSDLDPIEEALGYQRLIKDNGFTQEELGRA 135
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMS 218
+ KSRS +AN LR+L LP V+EM+ +++ GHAR ++ S L LA +V + ++
Sbjct: 136 LSKSRSAIANTLRLLDLPKEVQEMMAAGKLTAGHARAILAVGSEDGRLKLAHKVVGENLT 195
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCI 278
VR TE L K R K + Y +++ + N+ +K N+ + I
Sbjct: 196 VRQTESLAPLFSGMKGDRPKRQAQPQ----YFKRAARQLRLALDTNVKVKTVRNRNRIEI 251
Query: 279 KYETNEQLKIICSLLG 294
+++ + L + ++L
Sbjct: 252 EFKDEDDLVRLVNVLS 267
>gi|222153961|ref|YP_002563138.1| chromosome partitioning protein [Streptococcus uberis 0140J]
gi|222114774|emb|CAR43947.1| putative chromosome partitioning protein [Streptococcus uberis
0140J]
Length = 258
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 87/263 (33%), Positives = 150/263 (57%), Gaps = 10/263 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E+ I I IV NP+ PR +F + LE+L SIK +G+IQP+IVR + Y++IAGE
Sbjct: 2 SENFKIIKIEDIVANPYQPRIHFNEKDLEELANSIKVNGLIQPIIVRQSEVFGYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR +A+K+A L+E+P +I+ + N S+ AIVEN+QR DLNP+EEA ++ +I + T
Sbjct: 62 RRLKASKLAGLNEIPAVIKKISNSESMHQAIVENLQRSDLNPIEEARAFQNIIEKNNITH 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVI 212
+ +GKSR +++N +R+L+LP + + I + +IS GHAR L+ + + I
Sbjct: 122 EHLAKYMGKSRPYISNSIRLLQLPEIILKAIEENKISSGHARALLALDDSHLQEKYFKQI 181
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN- 271
+ + ++VR TE L++ EK ++ +E++++ +G+ + + +
Sbjct: 182 IKQHLNVRQTESLIKSSKKGHTL------KREEKNIFIKAIEEELAKTLGITVQLSQKKD 235
Query: 272 NKGQFCIKYETNEQLKIICSLLG 294
G Y+ E+L + + L
Sbjct: 236 GSGTLQFHYQNTEELNRVINKLK 258
>gi|302872903|ref|YP_003841539.1| parB-like partition protein [Caldicellulosiruptor obsidiansis OB47]
gi|302575762|gb|ADL43553.1| parB-like partition protein [Caldicellulosiruptor obsidiansis OB47]
Length = 285
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 102/290 (35%), Positives = 165/290 (56%), Gaps = 11/290 (3%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKT---ETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
K+RLGRGL AL G+ S + + + E + I+I I + + PR F E +
Sbjct: 2 KKRLGRGLDALFGDEISSSEKEFEAGFDDKENIEKIEEINIELIELSENQPRKVFNEEEI 61
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SIKS G+IQPL+V+ + +IAGERR RA K+A + +V II+ +N +
Sbjct: 62 EELASSIKSVGLIQPLVVQKKGDKYV-LIAGERRLRACKIAGIEKVKCIIKEYENPLEIA 120
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ +EN+QRKDLNP E+AL +++L+ E+GYTQ ++ +G SRS VAN LRIL L +
Sbjct: 121 L--IENIQRKDLNPYEKALAFKRLMDEFGYTQEELARRLGISRSKVANTLRILNLGEQII 178
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
++I K +IS GHA+ L+S D ++ EL Q ++++K++ E
Sbjct: 179 DLIIKGKISEGHAKVLLSVEDEEQRNKLAQLVVEKNLSVRELEQIVKSREDKKEFELESE 238
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+E + + GL + I+ + N+G+ I++ ++E+L+ I S+L
Sbjct: 239 IIREIE-----ENLMKLFGLRVKIQKKKNRGKIEIEFSSDEELEKIVSIL 283
>gi|325284183|ref|YP_004256724.1| parB-like partition protein [Deinococcus proteolyticus MRP]
gi|324315992|gb|ADY27107.1| parB-like partition protein [Deinococcus proteolyticus MRP]
Length = 295
Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 94/287 (32%), Positives = 151/287 (52%), Gaps = 13/287 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEK-----KTETIPESQDCISIHSIVPNPHNPR 55
MS + K LGRGL AL+ S + + E + ++ + PR
Sbjct: 1 MSKSPKKPSLGRGLDALLSRKEGSRPRAAEVETAAEQEQERRGVQLLPTSRVMQAAYQPR 60
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
FE L +L QSI+ GI+QPL+VR + ++I+AGERR+RA+++A + E+PVIIR+
Sbjct: 61 QVFEPTALAELAQSIREKGILQPLLVRPRGDA-FEIVAGERRWRASQLAGVDELPVIIRD 119
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+ ++ +LEIAI+EN+QR+DL PLEEA Y+ L+ +G Q + VGK RS VAN LR+
Sbjct: 120 LSDREALEIAIIENLQREDLGPLEEARAYKTLME-HGLNQEGVAQAVGKGRSTVANALRL 178
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L LP + + + +IS GHAR +++ + L + +R V+E + +
Sbjct: 179 LSLPDAALQALEAGDISAGHARAILAQPETDRLWAL-----EQIRRRGLNVREAEALRRD 233
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYET 282
R + +E +S + G + I +KG+ + Y +
Sbjct: 234 RAAAEPVRVNPPRPFKQIEVDLSRRTGTRVKIT-GEDKGRIELNYGS 279
>gi|255020233|ref|ZP_05292302.1| parB-like partition protein [Acidithiobacillus caldus ATCC 51756]
gi|254970375|gb|EET27868.1| parB-like partition protein [Acidithiobacillus caldus ATCC 51756]
Length = 280
Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 90/282 (31%), Positives = 151/282 (53%), Gaps = 19/282 (6%)
Query: 5 YSKRR-LGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+ LGRGL AL + +S I + + P PR +F E L
Sbjct: 1 MKRPGALGRGLDALFS------------AQAGGDSLRSIPLDLLQAGPFQPRRHFAEEAL 48
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SI+S G++QP++VRA+ +G Y+I+AGERR+RAA+ A L E+P ++R ++ +L
Sbjct: 49 EELASSIRSEGVLQPILVRAVADGRYEILAGERRWRAAQRAGLREIPALVRECGDQQALA 108
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
I ++EN+QR+DLNPLEEA ++LI E+ T + +G+SR+ ++N LR+L+L S+
Sbjct: 109 IGLIENIQRQDLNPLEEAQALQRLIDEFHLTHEALAQSLGRSRAAISNQLRLLRLDPSLA 168
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
++ +S GHAR LV+ A +VR+ L Q R++ +
Sbjct: 169 PHLQSGALSAGHARALVALEP----ALQRELGVRAVREG--LSVRQMESLAGRRREARRA 222
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQ 285
+ + L IS+++GL ++++ G+ I++ Q
Sbjct: 223 TAVDANVEALSAAISAQLGLPVTVRQIGGGGELRIRWHDATQ 264
>gi|220933183|ref|YP_002510091.1| parB-like partition protein [Halothermothrix orenii H 168]
gi|219994493|gb|ACL71096.1| parB-like partition protein [Halothermothrix orenii H 168]
Length = 287
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 100/296 (33%), Positives = 166/296 (56%), Gaps = 13/296 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SK RLG+GL ALI + D I I+ I PNP PR F+ E L
Sbjct: 1 MSKNRLGKGLGALIADNGTGNDK---------NRIKEIFINHIEPNPFQPRKEFDEEALT 51
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK +G+IQP+ VR + Y+++AGERR+RA+++ L ++P IIR+ + +E+
Sbjct: 52 ELAQSIKENGLIQPVTVRQVKPDRYQLVAGERRWRASQLIGLKKIPAIIRDYTDMQMMEM 111
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR+DLN +EEA Y++++ E+ TQ D+ VGKSRS +AN +R+L L V+
Sbjct: 112 ALIENLQREDLNAIEEAQAYQKMMEEFDMTQEDVARKVGKSRSSIANTVRLLNLAPKVQI 171
Query: 185 MIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ +E +S+GHAR +L + A ++ K+SVR+TE + + N E++KK
Sbjct: 172 YVSRETLSMGHARALLSLKDHKLQIEAADYVIKNKLSVRETERYIHQLKNNLEEKKKKKF 231
Query: 242 GSREK-EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
++ E +K +++ +G + IK + K I+ + ++ + +
Sbjct: 232 EDKKTLEPEWVRAQKLLANYLGAKVKIKKKKEKRVVTIECRNYKDIEKLIMKVNSG 287
>gi|256372780|ref|YP_003110604.1| parB-like partition protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256009364|gb|ACU54931.1| parB-like partition protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 306
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 29/299 (9%)
Query: 9 RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQ 68
LGRGL ALI + I + +I PNP PR F+ E L L
Sbjct: 6 GLGRGLGALIP----------TGVQQEQHGLVEIPVGAIRPNPLQPRTIFDEEALSGLAA 55
Query: 69 SIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
SI G++QP++VR + +G Y++IAGERR+RAA+ A L +P I+++ D++ SL++A++E
Sbjct: 56 SIAEVGVLQPILVRRVADG-YELIAGERRWRAAQRAGLDRIPAIVQDRDDRGSLQVAVIE 114
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
N+ R+DLNPLEEA Y QLI ++ T +++ VGKSR+ V+N LR+L+LP++++ M+
Sbjct: 115 NLHRRDLNPLEEAAAYRQLIDDFQLTHDEVARGVGKSRAAVSNTLRLLQLPAALQRMLLD 174
Query: 189 EEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDN-------------- 231
+S GHAR L+ D A+ V + +SVRD EE V+ N
Sbjct: 175 GVLSAGHARALLGCPDRRLQEELARRTVEEGLSVRDVEEAVRAISNPAAEATRVEAGESE 234
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKII 289
+ K+ +R + + +LE+ ++ + ++ I ++ G +++ L I
Sbjct: 235 HAQGPKEAVPEARLRPAIVVELERLLADVMESDVQIDVSKSGAGYIRVRFVDLADLHRI 293
>gi|253752821|ref|YP_003025962.1| chromosome partitioning protein [Streptococcus suis SC84]
gi|253754646|ref|YP_003027787.1| chromosome partitioning protein [Streptococcus suis P1/7]
gi|253756579|ref|YP_003029719.1| chromosome partitioning protein [Streptococcus suis BM407]
gi|251817110|emb|CAZ52762.1| putative chromosome partitioning protein [Streptococcus suis SC84]
gi|251819043|emb|CAZ56890.1| putative chromosome partitioning protein [Streptococcus suis BM407]
gi|251820892|emb|CAR47658.1| putative chromosome partitioning protein [Streptococcus suis P1/7]
gi|292559442|gb|ADE32443.1| ParB-like partition protein [Streptococcus suis GZ1]
gi|319759238|gb|ADV71180.1| putative chromosome partitioning protein [Streptococcus suis JS14]
Length = 254
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 86/256 (33%), Positives = 150/256 (58%), Gaps = 7/256 (2%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E ++I I PNP+ PR +F+ + L +L QSIK +G+IQP+IVR Y+++AGER
Sbjct: 2 EELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RA+++A L+ +P +++ + + L AI+EN+QR +LNP+EEA Y++LIS T +
Sbjct: 62 RLRASQLAGLTTIPAVVKELTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ I+GKSR +++N+LR+L L S ++ + + +IS GHAR LVS S+ V +
Sbjct: 121 EVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHARQLVSFSEEKQAEWVQLILS 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQ 275
+ V+ + KK ++++++L + E +S +G IK +N G+
Sbjct: 181 KDLS-----VRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGE 235
Query: 276 FCIKYETNEQLKIICS 291
I + ++ + I +
Sbjct: 236 IRISFNDLDEFERIIN 251
>gi|307705906|ref|ZP_07642744.1| stage 0 sporulation protein J [Streptococcus mitis SK597]
gi|307620567|gb|EFN99665.1| stage 0 sporulation protein J [Streptococcus mitis SK597]
Length = 252
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 81/259 (31%), Positives = 145/259 (55%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L++L QSIK +GIIQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGIIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L +P +++ + ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLRSIPAVVKQLSDQEMMVQSIIENLQRENLNPIEEARAYESLVEK-GFTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR +++N +R+L LP + + ++S HAR+LV + +
Sbjct: 121 EIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHARSLVGLNKEQQDYFFQRIIE 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + +K + +E + ++ + E+++ +GL++ IK + + G+
Sbjct: 181 EDISVRKLEALL-------TEKKQKKLQENDHFIQNEEEQLKKLLGLDVEIKLSKKDSGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ I + L
Sbjct: 234 IIISFSNQEEYSRIINSLK 252
>gi|94266827|ref|ZP_01290489.1| ParB-like partition protein [delta proteobacterium MLMS-1]
gi|93452502|gb|EAT03096.1| ParB-like partition protein [delta proteobacterium MLMS-1]
Length = 289
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 100/271 (36%), Positives = 157/271 (57%), Gaps = 8/271 (2%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN---G 87
+E S +I I PNP PR + E L+ L SI+ +GI+ PL+VR D+
Sbjct: 17 SSERENRSYFTCAIDRISPNPDQPRKQVDDESLQHLADSIRENGILLPLVVRRCDDGGDE 76
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++IIAGERR+RAAK+ASL EVPV++++V + LE+A+VEN+QR+DLNPLEEA Y +L
Sbjct: 77 RFEIIAGERRWRAAKLASLGEVPVLVKDVSPQDQLELALVENIQRRDLNPLEEAEAYLRL 136
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSD 204
+ +YG TQ ++ VG+ RS VAN LRI LP+ ++ + K +S+GHAR L+ +
Sbjct: 137 VRDYGLTQEEVARRVGRERSTVANALRINHLPAYAKDDLIKGVLSMGHARALLVVEDEQE 196
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE--KEKYLTDLEKKISSKVG 262
L I++K ++VR +EEL ++Q +++ + + + Y L K +
Sbjct: 197 QRRLRDKIITKGLNVRQSEELAKKQKQQQKGGGNKRQAKEQGIADPYCRSLAKDLERHFE 256
Query: 263 LNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ I KG+ I Y + + L+ + L+
Sbjct: 257 TRVRIIQNGEKGKVEIDYFSPDDLERVIGLI 287
>gi|294790216|ref|ZP_06755374.1| ParB family protein [Scardovia inopinata F0304]
gi|294458113|gb|EFG26466.1| ParB family protein [Scardovia inopinata F0304]
Length = 715
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 96/287 (33%), Positives = 160/287 (55%), Gaps = 15/287 (5%)
Query: 19 GEVNQSIDSPEKKTE----TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
G+ +++ DS ++ + +SI I PN PR F+ + L +L +SIK G
Sbjct: 392 GDESENADSSKESNDDLLPVAGGYLAELSIEQISPNEKQPRTIFDDDELAELAESIKQVG 451
Query: 75 IIQPLIVRAIDNGL-----YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
++QP++VR D Y++I GERR RA+K+A L +P I+R + S L A++EN
Sbjct: 452 VLQPVVVRKRDRDDDFPTEYELIMGERRLRASKLAGLKTIPAIVRTTSDNSMLRDALLEN 511
Query: 130 VQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
+ R LNPLEEA Y+Q++ ++G TQ + + KSR ++N LR+L+LP+SV++ +
Sbjct: 512 LHRVALNPLEEAAAYQQMMEDFGLTQEQLSQSISKSRPQISNTLRLLQLPASVQKKVASG 571
Query: 190 EISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+S GHAR L S SLA IV++++SVR TEE++ Q KK+ +K+ +
Sbjct: 572 VLSAGHARALLALPSGELMESLANRIVAEELSVRTTEEIIALQAGKKKSQKRQRADNAWA 631
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ D ++++ + IK KG+ I + + + L I S++
Sbjct: 632 DAPEID---ELANYFETKVKIKGTPKKGRIEITFASVDDLHRIMSII 675
>gi|154147884|ref|YP_001406262.1| spoOJ protein [Campylobacter hominis ATCC BAA-381]
gi|153803893|gb|ABS50900.1| spoOJ protein [Campylobacter hominis ATCC BAA-381]
Length = 286
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 158/290 (54%), Gaps = 13/290 (4%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
K+ LGRGL A++G+V + + + + I I PNP+ PR F+ E L++L
Sbjct: 5 KKALGRGLDAILGDVELTYTK--ELQSGRNDIVIELEIDKIKPNPYQPRKNFDEEALKEL 62
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
+SI+ HG+IQP+IV + +IAGERR RA K+ + I+ + +++ E+A+
Sbjct: 63 SESIERHGLIQPIIVMQKGDEYL-LIAGERRLRATKILGDKTIKAIVADFASQNLRELAL 121
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLNP+E A Y++LI EY TQ ++ I+ KSR+ + N +R+L L ++MI
Sbjct: 122 IENIQRQDLNPIELANSYKELIDEYKITQEELSDIIKKSRTQITNTIRLLSLSDFTQKMI 181
Query: 187 RKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+IS GHA+ +V + ++ +K+SVR+TE LV++ K +
Sbjct: 182 ANNKISQGHAKIMVGLNPEQEKLVVDTVIGQKLSVRETENLVKKIKEKNSPKVAKKINDE 241
Query: 245 EKE--KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
K L L+ K+ K G ISI++R + I+++ Q+
Sbjct: 242 VKNFKIELDKLKTKL-EKFG-KISIRNR----KISIEFDEISQISKFIEK 285
>gi|254458983|ref|ZP_05072406.1| stage 0 sporulation protein j [Campylobacterales bacterium GD 1]
gi|207084254|gb|EDZ61543.1| stage 0 sporulation protein j [Campylobacterales bacterium GD 1]
Length = 280
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 79/291 (27%), Positives = 151/291 (51%), Gaps = 11/291 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++LGRGL AL+GE++++ + + + + + I PNP+ PR F+ L
Sbjct: 1 MKSQKLGRGLDALLGEIDEAY----ENEGSSRDEVMELPLKDIRPNPYQPRKQFDENSLL 56
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SIK+ G++QP+IV D Y +IAGERR RA+K+ L + I+ + D +
Sbjct: 57 ELGESIKNDGLLQPIIV-TQDFDGYVLIAGERRLRASKLVKLKTIRAILIHSDENKMRQF 115
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+QR +LN +E A Y +LI Y TQ ++ + + KSR+H+ N +R+L+L ++
Sbjct: 116 ALIENIQRDELNAIELAEAYSELIKMYDVTQEELANKIHKSRTHITNTIRLLQLSPKTQK 175
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ +++I+ GHA+ L+ + V + E+ N KE++ +
Sbjct: 176 ALVEKKITAGHAKVLIGLDEKQQQLMVNSIIGQKLS-VREVEGIIKNMKEEKNSSEPKNN 234
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
E +D++++ +G + +K + I+++ Q+ + +
Sbjct: 235 FVEYDFSDIKERF-DFLGFK----AKASKNKLTIEFDNESQISDFLKYISK 280
>gi|71065876|ref|YP_264603.1| chromosome segregation DNA-binding protein [Psychrobacter arcticus
273-4]
gi|71038861|gb|AAZ19169.1| chromosome segregation DNA-binding protein [Psychrobacter arcticus
273-4]
Length = 375
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 73/282 (25%), Positives = 147/282 (52%), Gaps = 14/282 (4%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
++S E S I + + + PR L +L SI+ HG++QP+++R
Sbjct: 93 NRVNSIENSGSEDQISLVQIDVTRLQAGKYQPRRDMSETALAELASSIEQHGVMQPIVIR 152
Query: 83 A--------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
++IIAGERR+RAAKMA S +P I R + ++ ++ +A++EN+QR+D
Sbjct: 153 PLLANEDKSEAFVTHEIIAGERRWRAAKMAGKSVIPAIERALSDELAIALALIENIQRED 212
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE--EIS 192
L+ +E+A ++ +E+G + I +VGK+R+ V+N+LR+ +L +V++ + ++
Sbjct: 213 LSVIEQAAALQRFHTEFGMSHAMIAEVVGKARTTVSNLLRLNQLHDTVKDHLATSALDMG 272
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+S+ +AQ I+ M+VR+ E+LV + + K + + + +
Sbjct: 273 HARTLLALSSEQQPIIAQKIIDGGMTVREAEKLV---KSILQPAPKASRTEQVQSRDVER 329
Query: 253 LEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
L ++++ +G + +KH+ +G I + + +QL + +
Sbjct: 330 LTQRLTDMLGAEVKLKHKKDGQGSVEIFFHSQDQLAALIKHI 371
>gi|223933957|ref|ZP_03625916.1| parB-like partition protein [Streptococcus suis 89/1591]
gi|302024668|ref|ZP_07249879.1| chromosome partitioning protein [Streptococcus suis 05HAS68]
gi|330833801|ref|YP_004402626.1| parB-like partition protein [Streptococcus suis ST3]
gi|223897376|gb|EEF63778.1| parB-like partition protein [Streptococcus suis 89/1591]
gi|329308024|gb|AEB82440.1| parB-like partition protein [Streptococcus suis ST3]
Length = 254
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 86/256 (33%), Positives = 150/256 (58%), Gaps = 7/256 (2%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E ++I I PNP+ PR +F+ + L +L QSIK +G+IQP+IVR Y+++AGER
Sbjct: 2 EELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RA+++A L+ +P +++ + + L AI+EN+QR +LNP+EEA Y++LIS T +
Sbjct: 62 RLRASQLAGLTTIPAVVKELTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ I+GKSR +++N+LR+L L S ++ + + +IS GHAR LVS S+ V +
Sbjct: 121 EVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHARQLVSFSEEKQAEWVQLILS 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQ 275
+ V+ + KK ++++++L + E +S +G IK +N G+
Sbjct: 181 KDLS-----VRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGE 235
Query: 276 FCIKYETNEQLKIICS 291
I + ++ + I +
Sbjct: 236 IRINFNDLDEFERIIN 251
>gi|315605517|ref|ZP_07880554.1| stage 0 DNA-binding protein [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312784|gb|EFU60864.1| stage 0 DNA-binding protein [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 421
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 95/292 (32%), Positives = 146/292 (50%), Gaps = 20/292 (6%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
V++ + S I I IVPN PR F E L +L SIK G++QP++
Sbjct: 129 VSRETSVDAQLVPVPGASFAEIPIDQIVPNTKQPREVFNEEDLTELSASIKEVGVLQPVV 188
Query: 81 VRAIDNG----------------LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
VR I Y++I GERR RA+++A + +P IIR ++ L
Sbjct: 189 VRTIPATGRSTKLKEFIAEKPGARYELIMGERRLRASELAGETTIPAIIRETEDGDLLRD 248
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++EN+ R LNPLEEA Y+QL++++G TQ+++ + +SR +AN LR+LKLP SV++
Sbjct: 249 ALLENLHRSQLNPLEEASAYQQLMADFGATQDELAKRIARSRPQIANTLRLLKLPPSVQK 308
Query: 185 MIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ + IS GHAR L S + LA IV + +SVR TEE+V+ K
Sbjct: 309 KVAAQVISAGHARALLALSSPEEMERLADRIVQEGLSVRTTEEIVRLGK-IKAAAPPRSR 367
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + +S +SI KG+ I++ + L+ I L+
Sbjct: 368 RQQSLSPLGESVVSALSDAYDTRVSITEGRRKGKIVIEFAGADDLQRIADLI 419
>gi|255659845|ref|ZP_05405254.1| stage 0 sporulation protein J [Mitsuokella multacida DSM 20544]
gi|260847922|gb|EEX67929.1| stage 0 sporulation protein J [Mitsuokella multacida DSM 20544]
Length = 314
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 140/269 (52%), Gaps = 15/269 (5%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
++ + I+ I N + PR F+ LEDL +SI+ +GI+QPLIVR +
Sbjct: 19 NREITPAKDQVQEIAADEIRANRYQPRQNFDEAALEDLSESIRQYGILQPLIVRRLPEKG 78
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y++IAGERR RAA+ A L +VP ++R ++ EIA++EN+QR++LN +EEA Y L+
Sbjct: 79 YELIAGERRLRAARKAGLEKVPALVREYNDAEISEIALIENIQRENLNIIEEAEAYAFLM 138
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSDP 205
+ TQ + VG+SR H+AN LR+L+L V++ + E+ +G AR L +
Sbjct: 139 QNFQLTQEMLAKKVGRSRPHIANSLRLLELAEPVQDKLVAGELLMGQARPLLALKDEALQ 198
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR------------EKEKYLTDL 253
+ A I+++ +S R EELV+ + +++ + D
Sbjct: 199 VKAAAHILAEHLSSRQAEELVRRLLDDPAYLDAEESRPEDESAEAQETQEAQQDAFYQDA 258
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYET 282
+++ +G + I+ K + I++ +
Sbjct: 259 VGRLNEYLGTKVRIRPGKKKSRIEIEFYS 287
>gi|325478814|gb|EGC81924.1| putative stage 0 sporulation protein J [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 290
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 101/295 (34%), Positives = 162/295 (54%), Gaps = 13/295 (4%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
++ LGRGL+ALI E N+ + EK + I+ I P PR F+ E +E L
Sbjct: 4 RKTLGRGLSALIPESNEKLVESEK--------VTSLDINLIDPRSDQPRKNFDQESIEGL 55
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
+SIK +G++ P++V Y+I+AGERRFRA K L ++ IIR+ K +++
Sbjct: 56 AESIKEYGLLNPIVVTKNGTR-YEILAGERRFRACKHLGLEKIDAIIRDYSKKDIDILSL 114
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
VEN+QR+DL+P+EEA Y++L+ ++ TQ +I I+ KSRS++AN +R+L L + +
Sbjct: 115 VENIQREDLSPVEEAKAYKKLVDDFSMTQEEIAKIMAKSRSYIANTIRLLNLNDEELDAL 174
Query: 187 RKEEISLGHARTLVSTSDPLSLAQV---IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
++IS ARTL+S D + +S K+++R E L ++ KK K+ K +G
Sbjct: 175 TNKQISSSQARTLLSIKDDDKRKEALDGFISNKLNIRQAENLSEKNKTKKAKKTKKKDGL 234
Query: 244 REKEKY-LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ +K L D E+K KVG + I + I T E ++ I L + +
Sbjct: 235 SDIDKILLEDYEEKFMDKVGSKVKIDKTGQIYKLIIDCFTVEDIENIYWRLKDEN 289
>gi|301168594|emb|CBW28184.1| putative chromosome partitioning protein [Bacteriovorax marinus SJ]
Length = 308
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 102/313 (32%), Positives = 164/313 (52%), Gaps = 22/313 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSI----------------DSPEKKTETIPESQDCISI 44
M+ K LG+G+ +LI + +++ + I I
Sbjct: 1 MA---KKVALGKGIGSLISGASNDAVLGNLKNKMAFDVEGNSEAKEQVMVTDQQPSMIEI 57
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMA 104
I NP+ PR F+ + LE+L QSIK +G+IQP+IV + G ++++AGERR RA+K+A
Sbjct: 58 SEIKTNPNQPRKIFKEKELEELSQSIKENGVIQPVIVVQAEKG-FELVAGERRLRASKLA 116
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
L+++P +I+ ++ + +AI+ENVQR DLN +EEAL Y QL+ E+ TQ ++ +GK
Sbjct: 117 GLTKIPAVIKRATDREKMVMAIIENVQRSDLNCVEEALAYYQLMDEFNLTQEEVAKKLGK 176
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
RS VAN LRILKLP V E+++KE +S GHA+ L + D + + E
Sbjct: 177 ERSTVANFLRILKLPRDVIELLQKELLSFGHAKVLAAEKDREKAIRFANEAATNNLSIRE 236
Query: 225 LVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETN 283
L + + K+ K+ + ++ L L++K+ K G + + + N GQ +KY
Sbjct: 237 LEKLIKS-KKNFKEPKTTNPFFDEKLDSLKQKLEKKTGFHFQLTSKKNGAGQVVLKYSNE 295
Query: 284 EQLKIICSLLGEN 296
+ I L N
Sbjct: 296 AEFNDIFEYLMNN 308
>gi|326560415|gb|EGE10797.1| ParB-like chromosome partitioning protein [Moraxella catarrhalis
7169]
gi|326565849|gb|EGE16011.1| ParB-like chromosome partitioning protein [Moraxella catarrhalis
BC1]
Length = 346
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 89/344 (25%), Positives = 159/344 (46%), Gaps = 62/344 (18%)
Query: 6 SKRRLG--RGLAALIGEVNQS-----------IDSPEKKTETIPES-------------- 38
KR LG RGL L+G ++ + ++TET P +
Sbjct: 3 KKRGLGMNRGLDVLLGNISAEKKIIAGAQSLVASAASEQTETKPTASTKTTKINKAKADK 62
Query: 39 ------------------QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
I+ + + + PR E L +L SIK HG++QP++
Sbjct: 63 KAGNNNPALEAGMGEKVALVQIATNRLQSGKYQPRRDMNEEALNELSLSIKQHGVMQPIV 122
Query: 81 VRA--------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+R D ++IIAGERR+RAAK+A L +P I R + ++ ++ +A++EN+QR
Sbjct: 123 IRPLLSDESKSSDTVTHEIIAGERRWRAAKLAGLETIPAIERVLSDEVAIALALIENIQR 182
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK--EE 190
+DLN LE+A ++ +E+G + I S+VGK+R+ V+N++R+ L V++ + +
Sbjct: 183 EDLNVLEQAAALQRFHTEFGMSHAMIASVVGKARTTVSNLMRLNHLHDQVKQYMIDGVMD 242
Query: 191 ISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
+ A +S +A+ IV M+VRD E LV+ + + + +
Sbjct: 243 MGHARALLSLSQEQQPIIAKKIVDGGMTVRDAERLVKSILD------PNPKLIVQPNHEV 296
Query: 251 TDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
L ++IS +G + +K KG I + +++ + + L
Sbjct: 297 LALSQQISDALGAKVKLKQGKDGKGSVEIFFYDHDEFGELVNRL 340
>gi|94264823|ref|ZP_01288599.1| ParB-like partition protein [delta proteobacterium MLMS-1]
gi|93454704|gb|EAT04965.1| ParB-like partition protein [delta proteobacterium MLMS-1]
Length = 289
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 100/271 (36%), Positives = 157/271 (57%), Gaps = 8/271 (2%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN---G 87
+E S +I I PNP PR + E L+ L SI+ +GI+ PL+VR D+
Sbjct: 17 SSERENRSYFTCAIDRITPNPDQPRKQVDDESLQHLADSIRENGILLPLVVRRYDDGEDE 76
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++IIAGERR+RAAK+ASL EVPV++++V + LE+A+VEN+QR+DLNPLEEA Y +L
Sbjct: 77 RFEIIAGERRWRAAKLASLGEVPVLVKDVSPQDQLELALVENIQRRDLNPLEEAEAYLRL 136
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSD 204
+ +YG TQ ++ VG+ RS VAN LRI LP+ ++ + K +S+GHAR L+ +
Sbjct: 137 VRDYGLTQEEVARRVGRERSTVANALRINHLPAYAKDDLIKGVLSMGHARALLVVEDEQE 196
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE--KEKYLTDLEKKISSKVG 262
L I++K ++VR +EEL ++Q +++ + + + Y L K +
Sbjct: 197 QRRLRDKIITKGLNVRQSEELAKKQKQQQKGGGNKRQAKEQGIADPYCRSLAKDLERHFE 256
Query: 263 LNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ I KG+ I Y + + L+ + L+
Sbjct: 257 TRVRIIQNGEKGKVEIDYFSPDDLERVIGLI 287
>gi|229917465|ref|YP_002886111.1| parB-like partition protein [Exiguobacterium sp. AT1b]
gi|229468894|gb|ACQ70666.1| parB-like partition protein [Exiguobacterium sp. AT1b]
Length = 260
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 91/258 (35%), Positives = 154/258 (59%), Gaps = 5/258 (1%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
+ + I PNP+ PR FE E LE+L QSI+ +G++QP++VR G Y+IIAGERRF+AA
Sbjct: 4 LPLKFIRPNPNQPRKQFEVEKLEELRQSIERYGVLQPIVVRK-ATGYYEIIAGERRFQAA 62
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
K+A ++P ++ D+ +E+A++EN+QR DLN +EEA+ YEQL+ G TQ +
Sbjct: 63 KLAGKEDIPALVVTADSDRVMELALIENIQRADLNAIEEAVAYEQLMQTLGLTQQQLADR 122
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRD 221
VGKSRSHV N LR+L+LPS+V+ + ++++GHAR + ++ Q+ V
Sbjct: 123 VGKSRSHVTNSLRLLRLPSAVQHAVMVGDLTMGHARAITGMKSEQAMEQIA----KRVIA 178
Query: 222 TEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYE 281
V+ + +K + + + + +E ++ ++ +++SI+ R G +KY
Sbjct: 179 EHWTVRRLERYLQKERTEKKTLKRSNADIEAVEAVLAERLQMDVSIRPRRKGGVLELKYF 238
Query: 282 TNEQLKIICSLLGENDFE 299
+ + L+ + +LL DF+
Sbjct: 239 SQDDLEQLLTLLSPQDFD 256
>gi|307707895|ref|ZP_07644372.1| stage 0 sporulation protein J [Streptococcus mitis NCTC 12261]
gi|307616155|gb|EFN95351.1| stage 0 sporulation protein J [Streptococcus mitis NCTC 12261]
Length = 252
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 79/259 (30%), Positives = 144/259 (55%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L +L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDGEKLHELAQSIKENGVIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L +P +++ + ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLRYIPAVVKQLSDQEMMVQSIIENLQRENLNPIEEARAYESLVEK-GFTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR +++N +R+L LP + + ++S HAR+LV + +
Sbjct: 121 EIADKMGKSRPYISNSIRLLSLPEQILSEVENGQLSQAHARSLVGLNKEQQDYFFQRIIE 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + +K + ++ + ++ + E+++ +GL++ IK + + G+
Sbjct: 181 EDISVRKLEALL-------TEKKQKKLQKNDYFIQNEEEQLKKILGLDVEIKLSKKDSGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ I + L
Sbjct: 234 IIIAFSNQEEYSRIINSLK 252
>gi|93005887|ref|YP_580324.1| parB-like partition proteins [Psychrobacter cryohalolentis K5]
gi|92393565|gb|ABE74840.1| chromosome segregation DNA-binding protein [Psychrobacter
cryohalolentis K5]
Length = 371
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 72/283 (25%), Positives = 146/283 (51%), Gaps = 14/283 (4%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
++ E S I + + + PR L +L SI+ HG++QP+++
Sbjct: 88 GNRVNVSESNGSEDQISLVQIDVTRLQAGKYQPRRDMSETALAELASSIEQHGVMQPIVI 147
Query: 82 RA--------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
R ++IIAGERR+RAAKMA S +P I R + ++ ++ +A++EN+QR+
Sbjct: 148 RPLLATEDKSEAFVTHEIIAGERRWRAAKMAGKSVIPAIERALSDELAIALALIENIQRE 207
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE--EI 191
DL+ +E+A ++ +E+G + I +VGK+R+ V+N+LR+ +L +V++ + ++
Sbjct: 208 DLSVIEQAAALQRFHTEFGMSHAMIAEVVGKARTTVSNLLRLNQLHDTVKDHLATSALDM 267
Query: 192 SLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+S+ +AQ I+ M+VR+ E+LV + + K + + + +
Sbjct: 268 GHARTLLALSSEQQPIIAQKIIDGGMTVREAEKLV---KSILQPAPKASRIEQVQSRDVE 324
Query: 252 DLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
L ++++ +G + +KH+ +G I + + +QL + +
Sbjct: 325 RLTQRLTDMLGAEVKLKHKKDGQGSVEIFFHSQDQLAALIKHM 367
>gi|172059045|ref|YP_001815505.1| parB-like partition protein [Exiguobacterium sibiricum 255-15]
gi|171991566|gb|ACB62488.1| parB-like partition protein [Exiguobacterium sibiricum 255-15]
Length = 254
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 87/250 (34%), Positives = 145/250 (58%), Gaps = 6/250 (2%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
+ I I +I PNP PR F + L +L S+ HG+IQP++VR + G Y+IIAGERR++
Sbjct: 2 NEIPIGAIRPNPGQPRKQFHEKALTELANSLTRHGMIQPIVVRPRE-GFYEIIAGERRYQ 60
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK A S VPV+I + +E+A++EN+QR DL+ +EEA+ Y +++ E+ TQ ++
Sbjct: 61 AAKQAGFSRVPVLIIEANETRVMELALIENIQRADLSAIEEAMAYAEMLEEFNITQAELA 120
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+ VGKSRSH+ N LR+L+LP V++ + +E +S+GHAR L++ PL + ++
Sbjct: 121 NRVGKSRSHITNSLRLLQLPVEVQQAVMEERLSMGHARALLALKHPLKIERMAERVMR-- 178
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
E + ++ + KK + ++ L +E+ + ++G + IK G+ I
Sbjct: 179 ---ENWNVRRLEQELREKKQVRPAVKQSTELDFIEETLRERIGATVRIKTTKQAGKLEID 235
Query: 280 YETNEQLKII 289
+ L I
Sbjct: 236 FTDEADLNRI 245
>gi|210614284|ref|ZP_03290155.1| hypothetical protein CLONEX_02369 [Clostridium nexile DSM 1787]
gi|210150768|gb|EEA81777.1| hypothetical protein CLONEX_02369 [Clostridium nexile DSM 1787]
Length = 300
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 101/296 (34%), Positives = 175/296 (59%), Gaps = 6/296 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGE--VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ + LG+GL +LI + ++ + + + E E + ++I+ + PN PR +F
Sbjct: 1 MA--VKRGGLGKGLDSLIPDHKTVKTTEKKKPEVEEKKEGEQLVNINKVEPNHEQPRRHF 58
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E + L +L SIK G++QPLIV+ N Y+IIAGERR+RAAKMA + E+PVII+
Sbjct: 59 EEDSLLELADSIKQFGVLQPLIVQKR-NDYYEIIAGERRWRAAKMAGIKEIPVIIKEYTK 117
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ ++EIA++EN+QR++LNP+EEA+ +++L++E+ Q+++ V KSR+ V N +R+LKL
Sbjct: 118 REAVEIALIENIQRENLNPIEEAMAFKRLLTEFSLKQDEVAERVSKSRTTVTNSMRLLKL 177
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++MI + IS GHARTL++ + + E + K +K+
Sbjct: 178 DERVQQMIVDDMISTGHARTLLAIENHEEQYNLANKIFDEKLSVRETEKLIKELKNPKKE 237
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLL 293
+ E + DLE+K+ + +G + + + KG+ I+Y ++E+L+ I L+
Sbjct: 238 KEKKVVENDFIYKDLEEKMKTVMGTKVHVNPKKKGKGKIEIEYYSDEELERIFELI 293
>gi|290581421|ref|YP_003485813.1| hypothetical protein SmuNN2025_1895 [Streptococcus mutans NN2025]
gi|254998320|dbj|BAH88921.1| putative SpoJ [Streptococcus mutans NN2025]
Length = 256
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 90/259 (34%), Positives = 149/259 (57%), Gaps = 6/259 (2%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E ++ I PNP+ PR F+++ LE+L QSIK +G+IQP+IVR D Y ++AGER
Sbjct: 3 EQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R +AAK+A L+++PVII+ + + S++ AI+EN+QR DLNP+EEA Y+ LI+ T +
Sbjct: 63 RLKAAKLAGLNKIPVIIKKISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHD 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
DI ++GKSR ++ N +R+L LP + + + K IS GHAR L+S +
Sbjct: 123 DIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQGHARLLLSVEKQDLQDKWFQKIL 182
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
++ + + + E K+ +L + EK++S +GL + I ++ ++GQ
Sbjct: 183 TEQLSVHQIERALKS-----QTKKEKKPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQ 237
Query: 276 FCIKYETNEQLKIICSLLG 294
I + + E + + L
Sbjct: 238 LKISFSSEEDFNRLMNKLN 256
>gi|257065511|ref|YP_003145183.1| ParB-like partition protein [Slackia heliotrinireducens DSM 20476]
gi|256793164|gb|ACV23834.1| ParB-like partition protein [Slackia heliotrinireducens DSM 20476]
Length = 422
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 91/261 (34%), Positives = 156/261 (59%), Gaps = 7/261 (2%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
D I++ I PNP PR F +E L++L SIK G++QP++VR + + Y+IIAGERR++
Sbjct: 163 DEIAVDRIEPNPSQPRTAFRNEELDELSSSIKKDGLLQPILVRKMGDK-YQIIAGERRWQ 221
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AA+ A L +VPV I D+ +LE+A++EN+QR DLNP+EEA GY++++ TQ+++
Sbjct: 222 AAQRAGLKKVPVRIIKADDDKALELALIENLQRSDLNPIEEAYGYKRMMERGNKTQSEVA 281
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKK 216
+ V K RS +AN LR+L+LP +EM+ +++I+ GHAR ++ S L + S+K
Sbjct: 282 AAVSKGRSTIANALRLLELPEDAQEMLYEDKITAGHARAILSIPSDEGKKKLTDKLKSEK 341
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+SVR+ E L + +++ + K ++ G + +K + N K +
Sbjct: 342 LSVREAENLARLYAGRQKTN--TLKTKVPVPAVFKSTAKVLTKAFGTKVRVKSNANGKNK 399
Query: 276 FCIKYETNEQLKIICSLLGEN 296
I+++ +LK I ++ ++
Sbjct: 400 IEIEFKDEAELKRILEIMNQD 420
Score = 38.5 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQD 40
M+ KR LGRGL +L+G + + + E I ++
Sbjct: 1 MAK-QQKRGLGRGLGSLMGSYDSPAPAERRAAEPIKTKEE 39
>gi|254995420|ref|ZP_05277610.1| chromosome partitioning protein (parB) [Anaplasma marginale str.
Mississippi]
Length = 275
Score = 112 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 106/290 (36%), Positives = 164/290 (56%), Gaps = 18/290 (6%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
KR LG+G+ LIGE +S E+ I ++ + P PR F+ +++L
Sbjct: 2 KRSLGKGILELIGE-----ESEGDAATLTMEAPTRIRVNMLHPGRFQPRRKFDQAAIKEL 56
Query: 67 CQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
SI +G+IQP+IVR Y+IIAGERR+RA+ A L +VPVI+RNV + LEI+
Sbjct: 57 ASSITRNGLIQPIIVRKDAVGDRYEIIAGERRWRASIAAKLVDVPVIVRNVSDSKCLEIS 116
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL LEEA Y++LI E+ +T + +I+G+SRSH+ NILRIL LP SV+ M
Sbjct: 117 VIENIQREDLTALEEAESYKKLIDEFNHTHESLAAILGRSRSHITNILRILTLPDSVKRM 176
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
I IS GHAR L+ +P LA+ I+S MSVR+TE +V++ N + +
Sbjct: 177 ISDRSISFGHARCLLGAENPEELAERILSSGMSVRETEAMVKDLQNHTDIVQAT------ 230
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+E + ++ + ++ K I + + E+ + +L +
Sbjct: 231 ----TMRIESFLPGRLDTEVRVRKSGKK--LTINFTSEEKCEDFFKMLDK 274
>gi|307710358|ref|ZP_07646799.1| stage 0 sporulation protein J [Streptococcus mitis SK564]
gi|307618950|gb|EFN98085.1| stage 0 sporulation protein J [Streptococcus mitis SK564]
Length = 252
Score = 112 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 154/261 (59%), Gaps = 13/261 (4%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L +L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDREKLHELAQSIKENGVIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L +P +++ + ++ + AI+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLHSIPAVVKQLSDQEMMVQAIIENLQRENLNPIEEARAYESLVEK-GFTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVS 214
+I +GKSR +++N +R+L LP + + ++S HAR+LV + Q I+
Sbjct: 121 EIADKMGKSRPYISNSIRLLSLPEQIISEVENGKLSQAHARSLVGLNKEQQDYFFQRIIE 180
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNK 273
+ +SVR E L+ E+ KK+++ + ++ + E+++ +GL++ IK + +
Sbjct: 181 EDISVRKLEALLTEKKQKKQQKN---------DHFIQNEEEQLKKLLGLDVKIKLSKKDS 231
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G+ I + E+ I + L
Sbjct: 232 GKIIISFSNQEEYSRIINSLK 252
>gi|222475614|ref|YP_002564031.1| chromosome partitioning protein (parB) [Anaplasma marginale str.
Florida]
gi|255003607|ref|ZP_05278571.1| chromosome partitioning protein (parB) [Anaplasma marginale str.
Puerto Rico]
gi|255004736|ref|ZP_05279537.1| chromosome partitioning protein (parB) [Anaplasma marginale str.
Virginia]
gi|222419752|gb|ACM49775.1| chromosome partitioning protein (parB) [Anaplasma marginale str.
Florida]
Length = 275
Score = 112 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 106/290 (36%), Positives = 164/290 (56%), Gaps = 18/290 (6%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
KR LG+G+ LIGE +S E+ I ++ + P PR F+ +++L
Sbjct: 2 KRSLGKGILELIGE-----ESEGDAATLTMEAPTRIRVNMLHPGRFQPRRKFDQAAIKEL 56
Query: 67 CQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
SI +G+IQP+IVR Y+IIAGERR+RA+ A L +VPVI+RNV + LEI+
Sbjct: 57 ASSIARNGLIQPIIVRKDAVGDRYEIIAGERRWRASIAAKLVDVPVIVRNVSDSKCLEIS 116
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL LEEA Y++LI E+ +T + +I+G+SRSH+ NILRIL LP SV+ M
Sbjct: 117 VIENIQREDLTALEEAESYKKLIDEFNHTHESLAAILGRSRSHITNILRILTLPDSVKRM 176
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
I IS GHAR L+ +P LA+ I+S MSVR+TE +V++ N + +
Sbjct: 177 ISDRSISFGHARCLLGAENPEELAERILSSGMSVRETEAMVKDLQNHTDIVQAT------ 230
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+E + ++ + ++ K I + + E+ + +L +
Sbjct: 231 ----TMRIESFLPGRLDTEVRVRKSGKK--LTINFTSEEKCEDFFKMLDK 274
>gi|46199906|ref|YP_005573.1| chromosome partitioning protein parB [Thermus thermophilus HB27]
gi|46197533|gb|AAS81946.1| chromosome partitioning protein parB [Thermus thermophilus HB27]
Length = 269
Score = 112 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 102/294 (34%), Positives = 160/294 (54%), Gaps = 28/294 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS S LGRGL AL+ + + SI PNP PR F
Sbjct: 1 MSRKPS--GLGRGLEALLP--------------KTGAGVVRLPLASIRPNPRQPRKRFAE 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SI+ G++QPL+VR +G Y+++AGERR+RAA MA L EVP +++++ ++
Sbjct: 45 ESLKELADSIREKGLLQPLLVRPQGDG-YELVAGERRYRAALMAGLQEVPAVVKDLTDRE 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+A+VEN+QR+DL+P+EEA GY+ L E G TQ ++ VGK+RS VAN LR+L+LP
Sbjct: 104 ALELALVENLQREDLSPVEEARGYQAL-LEMGLTQEEVARRVGKARSTVANALRLLQLPP 162
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
E + + EI+ GHAR L+ L + + + V++ + +E+
Sbjct: 163 EALEALERGEITAGHARALLMLEPEDRLWGLKE-----ILEKGLSVRQAEALRERLAMAP 217
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ S E L ++S +GL + + + I+Y + E+L+ + LG
Sbjct: 218 KRSAEPSP----LSLELSRHLGLPVRVVGGKKG-KVVIQYRSLEELEALLRRLG 266
>gi|326405679|gb|ADZ62750.1| chromosome partitioning protein, ParB family [Lactococcus lactis
subsp. lactis CV56]
Length = 261
Score = 112 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 80/260 (30%), Positives = 150/260 (57%), Gaps = 2/260 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + + +IV NP+ PR F+ + L++L SI+ +G++QP+IVR Y+++AGER
Sbjct: 3 EQITQLKLSTIVKNPYQPRLVFDEDKLKELANSIQENGVLQPIIVRKSKLVGYELLAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RF+A+K+A L +P IIR+ ++ + ++I+EN+QR++LNPLEE+ QL + G T +
Sbjct: 63 RFQASKLAGLETIPAIIRSYSDEEMMTLSILENLQRENLNPLEESKSLAQLADKLGMTHD 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
I +GKSRS+V+N++R+L LP + + + +IS HARTL++ +P +++
Sbjct: 123 QIAKALGKSRSYVSNLIRLLGLPDTTLKHVENRDISPAHARTLLAEKNPKKQLELVDKII 182
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ L +++ K + + EK++ K+G + I+ ++ +G
Sbjct: 183 KEQLNVRALEAIIYGEEKVTDKSV-SKLNINLFTDETEKELMKKLGNRVKIQANKKYQGN 241
Query: 276 FCIKYETNEQLKIICSLLGE 295
I ++ ++L+ + LL +
Sbjct: 242 LSIHFDNLDELEHLIKLLKK 261
>gi|289168913|ref|YP_003447182.1| chromosome partitioning protein [Streptococcus mitis B6]
gi|288908480|emb|CBJ23322.1| chromosome partitioning protein [Streptococcus mitis B6]
Length = 252
Score = 112 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 146/259 (56%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L +L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDGEKLHELAQSIKENGVIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L +P +++ + ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLRSIPAVVKQLSDQEMMVQSIIENLQRENLNPIEEARAYESLVEK-GFTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR +++N +R+L LP + + ++S HAR+LV +
Sbjct: 121 EIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHARSLVGLNQEQQDYFF----- 175
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
R EE + + + +K + ++ ++ + E+++ +GL++ IK + + G+
Sbjct: 176 --QRIIEENISVRKLEALLTEKKQKKLQKTNHFIQNEEEQLKKLLGLDVEIKLSKKDSGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ I + L
Sbjct: 234 IIIAFSNQEEYSRIINSLK 252
>gi|55981938|ref|YP_145235.1| ParB family chromosome partitioning protein [Thermus thermophilus
HB8]
gi|55773351|dbj|BAD71792.1| chromosome partitioning protein, ParB family [Thermus thermophilus
HB8]
Length = 269
Score = 112 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 28/294 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS S LGRGL AL+ + + SI PNP PR F
Sbjct: 1 MSRKPS--GLGRGLEALLP--------------KTGAGVVRLPLASIRPNPRQPRKRFAE 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SI+ G++QPL+VR +G Y+++AGERR+RAA MA L EVP +++++ ++
Sbjct: 45 ESLKELADSIREKGLLQPLLVRPQGDG-YELVAGERRYRAALMAGLQEVPAVVKDLTDRE 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+A+VEN+QR+DL+P+EEA GY+ L E G TQ ++ VGK+RS VAN LR+L+LP
Sbjct: 104 ALELALVENLQREDLSPVEEARGYQAL-LEMGLTQEEVARRVGKARSTVANALRLLQLPP 162
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
E + + EI+ GHAR L+ L + + + V++ + +E+
Sbjct: 163 EALEALERGEITAGHARALLMLEPEDRLWGLKE-----ILEKGLSVRQAEALRERLAMAP 217
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ E L ++S +GL + + + I+Y + E+L+ + LG
Sbjct: 218 KRPAEPSP----LSLELSRHLGLPVRVVGGKKG-KVVIQYRSLEELEALLRRLG 266
>gi|269958360|ref|YP_003328147.1| chromosome partitioning protein ParB [Anaplasma centrale str.
Israel]
gi|269848189|gb|ACZ48833.1| chromosome partitioning protein ParB [Anaplasma centrale str.
Israel]
Length = 275
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 105/290 (36%), Positives = 164/290 (56%), Gaps = 18/290 (6%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
KR LG+G+ LIGE +S E+ I ++ + P PR F+ +++L
Sbjct: 2 KRSLGKGILELIGE-----ESEGDAATLTMEAPTRIRVNMLHPGRFQPRRKFDQAAIKEL 56
Query: 67 CQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
SI +G+IQP++VR Y+IIAGERR+RA+ A L +VPVI+RNV + LEI+
Sbjct: 57 ASSIARNGLIQPIVVRKDAVGDRYEIIAGERRWRASIAAKLVDVPVIVRNVSDSKCLEIS 116
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL LEEA Y++LI E+ +T + +I+G+SRSH+ NILRIL LP SV+ M
Sbjct: 117 VIENIQREDLTALEEAESYKKLIDEFNHTHESLAAILGRSRSHITNILRILTLPDSVKRM 176
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
I IS GHAR L+ +P LA+ I+S MSVR+TE +V++ N + +
Sbjct: 177 ISDRSISFGHARCLLGAENPEELAERILSSGMSVRETEAMVKDLQNHTDIVQAT------ 230
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+E + ++ + ++ K I + + E+ + +L +
Sbjct: 231 ----TMRIESFLPGRLDTEVRVRKSGKK--LTINFTSEEKCEDFFKMLDK 274
>gi|296113037|ref|YP_003626975.1| ParB-like chromosome partitioning protein [Moraxella catarrhalis
RH4]
gi|295920731|gb|ADG61082.1| ParB-like chromosome partitioning protein [Moraxella catarrhalis
RH4]
Length = 346
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 88/344 (25%), Positives = 158/344 (45%), Gaps = 62/344 (18%)
Query: 6 SKRRLG--RGLAALIGEVNQS-----------IDSPEKKTETIPES-------------- 38
KR LG RGL L+G ++ + ++TET P +
Sbjct: 3 KKRGLGMNRGLDVLLGNISAEKKIIAGAQSLVASAASEQTETKPTASTKTTKINKAKADK 62
Query: 39 ------------------QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
I+ + + + PR L +L SIK HG++QP++
Sbjct: 63 KAGNNNPALEAGMGEKVALVQIATNRLQSGKYQPRRDMNEAALNELSLSIKQHGVMQPIV 122
Query: 81 VRA--------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+R D ++IIAGERR+RAAK+A L +P I R + ++ ++ +A++EN+QR
Sbjct: 123 IRPLLSDESKSSDTVTHEIIAGERRWRAAKLAGLETIPAIERVLSDEVAIALALIENIQR 182
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK--EE 190
+DLN LE+A ++ +E+G + I S+VGK+R+ V+N++R+ L V++ + +
Sbjct: 183 EDLNVLEQAAALQRFHTEFGMSHAMIASVVGKARTTVSNLMRLNHLHDQVKQYMIDGVMD 242
Query: 191 ISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
+ A +S +A+ IV M+VRD E LV+ + + + +
Sbjct: 243 MGHARALLSLSQEQQPIIAKKIVDGGMTVRDAERLVKSILD------PNPKLIVQPNHEV 296
Query: 251 TDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
L ++IS +G + +K KG I + +++ + + L
Sbjct: 297 LALSQQISDALGAKVKLKQGKDGKGSVEIFFYDHDEFGELVNRL 340
>gi|116619162|ref|YP_821318.1| chromosome segregation DNA-binding protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116222324|gb|ABJ81033.1| chromosome segregation DNA-binding protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 266
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/253 (29%), Positives = 136/253 (53%), Gaps = 2/253 (0%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
I I NP PR F E L +L QSI+S+GIIQPL+V + Y+++AGERR+RA+
Sbjct: 11 IDPALIDANPLQPRRVFAQEPLAELAQSIRSNGIIQPLVVTRKGDR-YQLVAGERRWRAS 69
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
K+A ++ VPV++R++ LEI ++EN+QR+DLN +E A + ++ SE + + IG
Sbjct: 70 KLAEVATVPVVVRDIPEGRLLEITLIENIQREDLNAIETADAFARMTSELHMSADQIGLR 129
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRD 221
GK RS + N +R+L+LP+ V+ ++ + ++S GH R L+ + + +V
Sbjct: 130 TGKDRSTIVNFMRLLQLPADVQALVSENKLSAGHGRCLLKLPNAVVQREVAKKALAEGWS 189
Query: 222 TEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKY 280
++ + + + + + ++ ++G I +K +G+ I+Y
Sbjct: 190 VRQMERVCAKIADPVAPKAVEEAKLDPNVKAAIDEMQRRLGTKIHVKEGARGRGKLEIEY 249
Query: 281 ETNEQLKIICSLL 293
+ + L I ++
Sbjct: 250 YSADDLTRIYDVI 262
>gi|281490560|ref|YP_003352540.1| chromosome partitioning protein ParB [Lactococcus lactis subsp.
lactis KF147]
gi|281374378|gb|ADA63911.1| Chromosome partitioning protein ParB [Lactococcus lactis subsp.
lactis KF147]
Length = 261
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 80/260 (30%), Positives = 150/260 (57%), Gaps = 2/260 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + + +IV NP+ PR F+ + L++L SI+ +G++QP+IVR Y+++AGER
Sbjct: 3 EQITQLKLSTIVKNPYQPRLVFDEDKLKELANSIQENGVLQPIIVRKSKLVGYELLAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RF+A+K+A L +P IIR+ ++ + ++I+EN+QR++LNPLEE+ QL + G T +
Sbjct: 63 RFQASKLAGLETIPAIIRSYSDEEMMTLSILENLQRENLNPLEESKSLAQLADKLGMTHD 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
I +GKSRS+V+N++R+L LP ++ + + +IS HARTL++ +P +++
Sbjct: 123 QIAKALGKSRSYVSNLIRLLGLPDTILKHVENRDISPAHARTLLAEKNPKKQLELVDKII 182
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ L +++ K + + EK++ K+G + I+ ++ +G
Sbjct: 183 KEQLNVRALEAIIYGEEKVTDKSV-SKLNINLFTDETEKELMKKLGNRVKIQANKKYQGN 241
Query: 276 FCIKYETNEQLKIICSLLGE 295
I + ++L+ + LL +
Sbjct: 242 LSIHFGNLDELEHLIKLLKK 261
>gi|319936925|ref|ZP_08011336.1| stage 0 sporulation protein J [Coprobacillus sp. 29_1]
gi|319808024|gb|EFW04599.1| stage 0 sporulation protein J [Coprobacillus sp. 29_1]
Length = 297
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 160/291 (54%), Gaps = 14/291 (4%)
Query: 15 AALIGEVNQSID----SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
A+ GE +Q D + + SQ + + I PNP+ PR +F+ E L +L SI
Sbjct: 15 DAIFGEASQGGDLQSVISAIEKKAPQLSQVEVKLKDIRPNPYQPRKHFDEEKLNELAVSI 74
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
K HGI QP+I++ Y+I+AGERRFRAA + L EVP II + ++ +EIA++EN+
Sbjct: 75 KEHGIFQPIILKE-SVQGYEIVAGERRFRAASIVGLEEVPAIIVDFSDQQMMEIALLENI 133
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
QR+DLN +EEA Y+ ++ + TQ ++ VGKSR+H+AN +R+LK+P +++ + +
Sbjct: 134 QREDLNAIEEAQAYQSMMKKLKLTQEELSKRVGKSRAHIANTVRLLKMPKKLQDYVLEGT 193
Query: 191 ISLGHARTLVSTSDPL--SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
+++GH + L++ + +AQ + ++SVR+ E++V+ + + + EK K
Sbjct: 194 LTMGHIKPLITIDEKKALEVAQKAIDNELSVREVEDIVKGIK---LQDARKAKPKEEKPK 250
Query: 249 YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
+E + K I + IKY + L I ++G + +
Sbjct: 251 EYVYVEGLLRKKYRTKIKVDDN----TITIKYSDTKDLNRILEIMGVIEED 297
>gi|225862056|ref|YP_002743565.1| stage 0 sporulation protein J [Streptococcus pneumoniae
Taiwan19F-14]
gi|298229491|ref|ZP_06963172.1| stage 0 sporulation protein J [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255939|ref|ZP_06979525.1| stage 0 sporulation protein J [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298501756|ref|YP_003723696.1| ParB family partitioning protein [Streptococcus pneumoniae
TCH8431/19A]
gi|225728169|gb|ACO24020.1| stage 0 sporulation protein J [Streptococcus pneumoniae
Taiwan19F-14]
gi|298237351|gb|ADI68482.1| ParB family partitioning protein [Streptococcus pneumoniae
TCH8431/19A]
gi|327388985|gb|EGE87333.1| parB-like partition s domain protein [Streptococcus pneumoniae
GA04375]
Length = 252
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 83/259 (32%), Positives = 147/259 (56%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L +P +++ + ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLRSIPAVVKQISDQEMMVQSIIENLQRENLNPIEEACAYESLVEK-GFTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR +++N +R+L LP + + ++S HAR+LV +
Sbjct: 121 EIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHARSLVGLNKEQQDYFF----- 175
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
R EE + + + +K + ++ ++ + EK++ +GL++ IK + + G+
Sbjct: 176 --QRIIEEDISVRKLETLLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ I + L
Sbjct: 234 IIISFSNQEEYSRIINSLK 252
>gi|116510914|ref|YP_808130.1| chromosome segregation DNA-binding protein [Lactococcus lactis
subsp. cremoris SK11]
gi|116106568|gb|ABJ71708.1| chromosome segregation DNA-binding protein [Lactococcus lactis
subsp. cremoris SK11]
Length = 261
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 81/260 (31%), Positives = 151/260 (58%), Gaps = 2/260 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + + +IV NP+ PR F+ + L +L SIK +G++QP+IVR Y+++AGER
Sbjct: 3 EEITQLKLSTIVKNPYQPRLVFDEDRLRELANSIKENGVLQPIIVRKSKLIGYELLAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RF+A+K+A L +P IIR ++ + ++I+EN+QR++LNPLEE+ QL + G T +
Sbjct: 63 RFQASKLAGLETIPAIIRTYSDEEMMTLSILENLQRENLNPLEESKSLAQLSDKLGMTHD 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSRS+V+N++R+L LP + + + +S HARTL++ +P +++
Sbjct: 123 EIAKALGKSRSYVSNLIRLLGLPDKILKHVENRTLSPAHARTLLAEKNPKKQLELVDKII 182
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ EL +++ K S + + EK++ K+G + I+ ++ +G+
Sbjct: 183 NEQLNVRELEAIIYGEEKVTDKSVSNSN-INLFTDETEKELMKKLGNKVKIQANKKYQGK 241
Query: 276 FCIKYETNEQLKIICSLLGE 295
+ ++ ++L+ + LL +
Sbjct: 242 LSLHFDNLDELEHLIELLKK 261
>gi|15672078|ref|NP_266252.1| chromosome partitioning protein [Lactococcus lactis subsp. lactis
Il1403]
gi|12722941|gb|AAK04194.1|AE006248_2 chromosome partitioning protein [Lactococcus lactis subsp. lactis
Il1403]
Length = 261
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 80/260 (30%), Positives = 151/260 (58%), Gaps = 2/260 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + + +IV NP+ PR F+ + L++L SI+ +G++QP+IVR Y+++AGER
Sbjct: 3 EQITQLKLSTIVKNPYQPRLVFDEDKLKELANSIQENGVLQPIIVRKSKLVGYELLAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RF+A+K+A L +P IIR+ ++ + ++I+EN+QR++LNPLEE+ QL + G T +
Sbjct: 63 RFQASKLAGLETIPAIIRSYSDEEMMTLSILENLQRENLNPLEESKSLAQLADKLGMTHD 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
I +GKSRS+V+N++R+L LP ++ + + +IS HARTL++ +P +++
Sbjct: 123 QIAKALGKSRSYVSNLIRLLGLPDTILKHVENRDISPAHARTLLAEKNPKKQLELVDKII 182
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ L +++ K + + EK++ K+G + I+ ++ +G
Sbjct: 183 KEQLNVRALEAIIYGEEKFTDKSI-SKLNINLFTDETEKELMKKLGNRVKIQANKKYQGN 241
Query: 276 FCIKYETNEQLKIICSLLGE 295
I ++ ++L+ + LL +
Sbjct: 242 LSIHFDNLDELEHLIKLLKK 261
>gi|125622981|ref|YP_001031464.1| chromosome partitioning protein parA [Lactococcus lactis subsp.
cremoris MG1363]
gi|124491789|emb|CAL96709.1| chromosome partitioning protein parA [Lactococcus lactis subsp.
cremoris MG1363]
gi|300069722|gb|ADJ59122.1| chromosome partitioning protein parA [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 261
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 81/260 (31%), Positives = 151/260 (58%), Gaps = 2/260 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + + +IV NP+ PR F+ + L +L SIK +G++QP+IVR Y+++AGER
Sbjct: 3 EEITQLKLSTIVKNPYQPRLVFDEDRLRELANSIKENGVLQPIIVRKSKLIGYELLAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RF+A+K+A L +P IIR ++ + ++I+EN+QR++LNPLEE+ QL + G T +
Sbjct: 63 RFQASKLAGLETIPAIIRTYSDEEMMTLSILENLQRENLNPLEESKSLAQLSEKLGMTHD 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSRS+V+N++R+L LP + + + +S HARTL++ +P +++
Sbjct: 123 EIAKALGKSRSYVSNLIRLLGLPDKILKHVENRTLSPAHARTLLAEKNPKKQLELVDKII 182
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ EL +++ K S + + EK++ K+G + I+ ++ +G+
Sbjct: 183 NEQLNVRELEAIIYGEEKVTDKSVSNSN-INLFTDETEKELMKKLGNKVKIQANKKYQGK 241
Query: 276 FCIKYETNEQLKIICSLLGE 295
+ ++ ++L+ + LL +
Sbjct: 242 LSLHFDNLDELEHLIELLKK 261
>gi|329115781|ref|ZP_08244498.1| putative stage 0 sporulation protein J [Streptococcus parauberis
NCFD 2020]
gi|326906186|gb|EGE53100.1| putative stage 0 sporulation protein J [Streptococcus parauberis
NCFD 2020]
Length = 257
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 90/259 (34%), Positives = 149/259 (57%), Gaps = 5/259 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E I I IV NP+ PR F+++ L +L SIK +G+IQP+IVR D Y++IAGER
Sbjct: 3 EHLKTIPIADIVANPYQPRLSFDTKELMELAHSIKMNGLIQPIIVRKSDIFGYELIAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RA+++A L+ +P +I+++ NK S+ AIVEN+QR +LNP+EEA ++ ++ + T +
Sbjct: 63 RLRASQLAGLTTIPAVIKDISNKDSMHQAIVENLQRSNLNPIEEAKAFQNILEKEEMTHD 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ +GKSR +++N LR+L+LP S++E I K IS GHAR L++ +
Sbjct: 123 QLAQYMGKSRPYISNSLRLLQLPKSIKEAIEKHHISSGHARALLAVTSKKEQENYF---- 178
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQ 275
+ V++ +N +K+ EK+ + +E +I+ +GL I + +N G
Sbjct: 179 KQIISQNLSVRQTENLVKKKTNKKLSKIEKDIFNQAIENEIAKSLGLPIQLHKKNDGTGH 238
Query: 276 FCIKYETNEQLKIICSLLG 294
+ + E+L I + L
Sbjct: 239 IKLTFSNTEELNRIINKLK 257
>gi|326576134|gb|EGE26050.1| ParB-like chromosome partitioning protein [Moraxella catarrhalis
101P30B1]
Length = 346
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 88/344 (25%), Positives = 158/344 (45%), Gaps = 62/344 (18%)
Query: 6 SKRRLG--RGLAALIGEVNQS-----------IDSPEKKTETIPES-------------- 38
KR LG RGL L+G ++ + ++TET P +
Sbjct: 3 KKRGLGMNRGLDMLLGNISAEKKIIAGAQSLVASAASEQTETKPTASTKTTKINKAKADK 62
Query: 39 ------------------QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
I+ + + + PR L +L SIK HG++QP++
Sbjct: 63 KAGNNNPALEAGMGEKVALVQIATNRLQSGKYQPRRDMNEAALNELSLSIKQHGVMQPIV 122
Query: 81 VRA--------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+R D ++IIAGERR+RAAK+A L +P I R + ++ ++ +A++EN+QR
Sbjct: 123 IRPLLSDESKSSDTVTHEIIAGERRWRAAKLAGLETIPAIERVLSDEVAIALALIENIQR 182
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK--EE 190
+DLN LE+A ++ +E+G + I S+VGK+R+ V+N++R+ L V++ + +
Sbjct: 183 EDLNVLEQAAALQRFHTEFGMSHAMIASVVGKARTTVSNLMRLNHLHDQVKQYMIDGVMD 242
Query: 191 ISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
+ A +S +A+ IV M+VRD E LV+ + + + +
Sbjct: 243 MGHARALLSLSQEQQPIIAKKIVDGGMTVRDAERLVKSILD------PNPKLIVQPNHEV 296
Query: 251 TDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
L ++IS +G + +K KG I + +++ + + L
Sbjct: 297 LALSQQISDALGAKVKLKQGKDGKGSVEIFFYDHDEFGELVNRL 340
>gi|307711215|ref|ZP_07647637.1| stage 0 sporulation protein J [Streptococcus mitis SK321]
gi|307617177|gb|EFN96355.1| stage 0 sporulation protein J [Streptococcus mitis SK321]
Length = 252
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 155/261 (59%), Gaps = 13/261 (4%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L +L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDGEKLHELAQSIKENGVIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L+ +P +++ + ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLTSIPAVVKQLSDQEMMVQSIIENLQRENLNPIEEARAYESLVEK-GFTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVS 214
+I +GKSR +++N +R+L LP + + ++S HAR+LV + Q I+
Sbjct: 121 EIADKMGKSRPYISNSIRLLSLPEHILSEVENGKLSQAHARSLVGLNKEQQDYFFQRIIY 180
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNK 273
+ +SVR E L+ E+ KK+K+ + ++ + E+++ +GL++ IK + +
Sbjct: 181 EDISVRKLEALLTEKKQKKKKKN---------DYFIQNEEEQLKKLLGLDVEIKLSKKDN 231
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G+ I + E+ I + L
Sbjct: 232 GKIIISFSNQEEYSRIINSLK 252
>gi|326577087|gb|EGE26981.1| ParB-like chromosome partitioning protein [Moraxella catarrhalis
O35E]
Length = 347
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 88/345 (25%), Positives = 158/345 (45%), Gaps = 63/345 (18%)
Query: 6 SKRRLG--RGLAALIGEVNQS-----------IDSPEKKTETIPES-------------- 38
KR LG RGL L+G ++ + ++TET P +
Sbjct: 3 KKRGLGMNRGLDVLLGNISAEKKIIAGAQSLVASAASEQTETKPTASTKTTKINKAKADK 62
Query: 39 -------------------QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
I+ + + + PR L +L SIK HG++QP+
Sbjct: 63 KAGNNNNPALEAGMGEKVALVQIATNRLQSGKYQPRRDMNEAALNELSLSIKQHGVMQPI 122
Query: 80 IVRA--------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
++R D ++IIAGERR+RAAK+A L +P I R + ++ ++ +A++EN+Q
Sbjct: 123 VIRPLLSDESKSSDTVTHEIIAGERRWRAAKLAGLETIPAIERVLSDEVAIALALIENIQ 182
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK--E 189
R+DLN LE+A ++ +E+G + I S+VGK+R+ V+N++R+ L V++ +
Sbjct: 183 REDLNVLEQAAALQRFHTEFGMSHAMIASVVGKARTTVSNLMRLNHLHDQVKQYMIDGVM 242
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
++ A +S +A+ IV M+VRD E LV+ + + +
Sbjct: 243 DMGHARALLSLSQEQQPIIAKKIVDGGMTVRDAERLVKSILD------PNPKLIVQPNHE 296
Query: 250 LTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
+ L ++IS +G + +K KG I + +++ + + L
Sbjct: 297 VLALSQQISDALGAKVKLKQGKDGKGSVEIFFYDHDEFGELVNRL 341
>gi|304439127|ref|ZP_07399046.1| stage 0 sporulation protein J [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372486|gb|EFM26073.1| stage 0 sporulation protein J [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 346
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 11/283 (3%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
LI E +++ ++ I++ I NP PR YF+ + L +L +SI+ G++
Sbjct: 75 LISE--DNLNDVNNTHDSNNFGLKNIAVELITANPDQPRKYFDEDILRELSKSIEELGVL 132
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QPL+VR + N + +IAGERR RA+ MA L EVP I+ +V + + +I+I+ENVQR+DL+
Sbjct: 133 QPLMVRPMGNRYF-LIAGERRLRASIMAGLKEVPCIVADVSDFEADKISIIENVQREDLS 191
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y LI YG Q+++G I+GKSR + N +R+LKLP V+ MI E++ H
Sbjct: 192 PIEEARAYRNLIENYGMFQDEVGDILGKSRQFIGNRIRLLKLPEEVQNMIEAGELTYSHG 251
Query: 197 RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ L+S + + + K + +++ +K++ ++KYL L +K
Sbjct: 252 QILLSLENEEDMLREANRIKNDSITVTTMRRKRPRRKKEVV--------RDKYLDALLEK 303
Query: 257 ISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
+SS +G I K + I+Y ++E L+ I S++ D +
Sbjct: 304 MSSHLGTKIDSKGTGAVKKLEIEYYSDEDLERIASIIMGGDLD 346
>gi|322377906|ref|ZP_08052394.1| spspoJ protein [Streptococcus sp. M334]
gi|321281082|gb|EFX58094.1| spspoJ protein [Streptococcus sp. M334]
Length = 252
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 79/259 (30%), Positives = 144/259 (55%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L +L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDREKLHELSQSIKENGVIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L+ +P +++ + ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLTSIPAVVKQLSDQEMMVQSIIENLQRENLNPIEEARAYESLVEK-GFTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR +++N +R+L LP + + ++S HAR+LV + +
Sbjct: 121 EIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHARSLVGLNKEQQDYFFQRIIE 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + +K + ++ ++ + E+++ +GL++ IK + + G+
Sbjct: 181 EDISVRKLEALL-------TEKKQKKLQKTNHFIQNEEEQLKKLLGLDVEIKLSKKDSGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ I + L
Sbjct: 234 IIISFSNQEEYSRIINSLK 252
>gi|24380492|ref|NP_722447.1| putative SpoJ [Streptococcus mutans UA159]
gi|24378524|gb|AAN59753.1|AE015037_4 putative SpoJ [Streptococcus mutans UA159]
Length = 257
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 90/259 (34%), Positives = 149/259 (57%), Gaps = 6/259 (2%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E ++ I PNP+ PR F+++ LE+L QSIK +G+IQP+IVR D Y ++AGER
Sbjct: 4 EQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGER 63
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R +AAK+A L+++PVII+ + + S++ AI+EN+QR DLNP+EEA Y+ LI+ T +
Sbjct: 64 RLKAAKLAGLNKIPVIIKKISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHD 123
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
DI ++GKSR ++ N +R+L LP + + + K IS GHAR L+S +
Sbjct: 124 DIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQGHARLLLSIEKQDLQDKWFQKIL 183
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
++ + + + E K+ +L + EK++S +GL + I ++ ++GQ
Sbjct: 184 TEQLSVHQIERALKS-----QTKKEKKTSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQ 238
Query: 276 FCIKYETNEQLKIICSLLG 294
I + + E + + L
Sbjct: 239 LKISFSSEEDFNRLMNKLN 257
>gi|154503062|ref|ZP_02040122.1| hypothetical protein RUMGNA_00884 [Ruminococcus gnavus ATCC 29149]
gi|153796303|gb|EDN78723.1| hypothetical protein RUMGNA_00884 [Ruminococcus gnavus ATCC 29149]
Length = 302
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 100/283 (35%), Positives = 166/283 (58%), Gaps = 14/283 (4%)
Query: 3 NNYSKRRLGRGLAALIGE------VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRN 56
+ LG+GL +LI Q+ + ++K + + + I + PN PR
Sbjct: 1 MAVKRNGLGKGLDSLIPNKTVKTTEKQANKTQKEKVKVEKSGETIVKITQVEPNSEQPRK 60
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
F+ + L +L SIK G++QPL+V+ N Y+IIAGERR+RAAK+A L EVPV++R
Sbjct: 61 DFDEDALLELADSIKQFGVLQPLLVQK-KNDYYEIIAGERRWRAAKLAGLKEVPVLVREY 119
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ +EI+++EN+QR++LNP+EEA+ Y++L+ E+ Q++I V KSR+ V N +R+L
Sbjct: 120 TEQEVVEISLIENIQRENLNPIEEAIAYKRLLKEFHLKQDEIAERVSKSRTAVTNSMRLL 179
Query: 177 KLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
KL S V++M+ + IS GHAR L+ ++A I +K+SVR+TE+L++ N
Sbjct: 180 KLNSKVQQMVIDDMISTGHARALLALEDEEQQYTIANKIFDEKLSVRETEKLIKILKN-- 237
Query: 234 EKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
+K + E +LE+K+ +G +++ + N KG+
Sbjct: 238 -PKKTAKKEKIEHTFIYENLEEKMKGIMGTKVNVNPKSNGKGK 279
>gi|322388479|ref|ZP_08062082.1| ParB/SpoJ family partitioning protein [Streptococcus infantis ATCC
700779]
gi|321140792|gb|EFX36294.1| ParB/SpoJ family partitioning protein [Streptococcus infantis ATCC
700779]
Length = 253
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 90/259 (34%), Positives = 145/259 (55%), Gaps = 8/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E I I I NP+ PR F E +++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EELKLIRISDIQKNPYQPRKEFSKEKIQELAQSIKENGLIQPIIVRQSPVVGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ A LSEVPVII+ + ++ + +I+EN+QR+DLNP+EEA Y+ LI + GYT
Sbjct: 62 RYRASIEAGLSEVPVIIKKLSDQEMMVHSIIENLQREDLNPIEEAKAYQSLIDK-GYTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
DI +GKSR ++ N++R+L LP + + ++S HAR L+
Sbjct: 121 DIAEKMGKSRPYITNLVRLLTLPDFILTEVETGKLSQAHARLLIQLPLKE------QKNL 174
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
++ E+L Q K +K + S+EK+ ++ + E+ + +GL++ I + G+
Sbjct: 175 LNRIQKEDLSVRQVEHLLKEEKNKKKSKEKDHFIKEEEENLKKLLGLDVQIVLQKKEAGK 234
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ + + L
Sbjct: 235 ITISFHNQEEYQRFINSLK 253
>gi|225860011|ref|YP_002741521.1| stage 0 sporulation protein J [Streptococcus pneumoniae 70585]
gi|225721156|gb|ACO17010.1| stage 0 sporulation protein J [Streptococcus pneumoniae 70585]
Length = 252
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 80/259 (30%), Positives = 144/259 (55%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L +P +++ + ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLRSIPAVVKQISDQEMMVQSIIENLQRENLNPIEEARAYESLVEK-GFTHT 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR +++N +R+L LP + + ++S HAR+LV + +
Sbjct: 121 EIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHARSLVGLNKEQQDYFFQRIIE 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + +K + ++ ++ + EK++ +GL++ IK + + G+
Sbjct: 181 EDISVRKLEALL-------TEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ I + L
Sbjct: 234 IIISFSNQEEYSRIINSLK 252
>gi|227500998|ref|ZP_03931047.1| possible stage 0 DNA-binding family protein [Anaerococcus tetradius
ATCC 35098]
gi|227216771|gb|EEI82169.1| possible stage 0 DNA-binding family protein [Anaerococcus tetradius
ATCC 35098]
Length = 288
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 95/299 (31%), Positives = 158/299 (52%), Gaps = 14/299 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K+ LGRGL+ALI E N ++ + ES + I + I P PRN F+
Sbjct: 1 MNKMTGKKTLGRGLSALIPETN---------SKEVRESIEQIDLSLIDPRDDQPRNIFDE 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E +E L +SIK +G++ IV Y+I+AGERR+RA+ L ++ I+R+ K
Sbjct: 52 EAIEGLSESIKEYGLL-NPIVLTKKCERYEILAGERRYRASIKLGLKKIDAIVRDYTKKD 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
++++EN+QR+DLNP+EEA Y+++ ++ TQ +I VGKSRS++AN +R+LKL
Sbjct: 111 IDILSLIENIQREDLNPIEEARAYKKISDDFSMTQEEISKTVGKSRSYIANSMRLLKLNE 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
S + +++I+ ARTL+S D + + + ++ NKK+K K
Sbjct: 171 SESRALLEKKITSSQARTLLSIKDEDERKKALDDFINKKLKVRD-AEKIGNKKDKDSKKT 229
Query: 241 EGSREKEKY---LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ + + L D E+K +VG + I + + I T E ++ I L ++
Sbjct: 230 QKNGLSDIDKILLEDYEEKFMERVGSKVKIDKTGDTYKLIIDCFTVEDIENIYWRLTDD 288
>gi|148984544|ref|ZP_01817832.1| hypothetical protein CGSSp3BS71_10833 [Streptococcus pneumoniae
SP3-BS71]
gi|149020158|ref|ZP_01835132.1| hypothetical protein CGSSp23BS72_08984 [Streptococcus pneumoniae
SP23-BS72]
gi|169833627|ref|YP_001695589.1| stage 0 sporulation protein J [Streptococcus pneumoniae
Hungary19A-6]
gi|221232938|ref|YP_002512092.1| chromosome partitioning protein ParB [Streptococcus pneumoniae ATCC
700669]
gi|225855734|ref|YP_002737246.1| stage 0 sporulation protein J [Streptococcus pneumoniae JJA]
gi|147923321|gb|EDK74435.1| hypothetical protein CGSSp3BS71_10833 [Streptococcus pneumoniae
SP3-BS71]
gi|147930836|gb|EDK81817.1| hypothetical protein CGSSp23BS72_08984 [Streptococcus pneumoniae
SP23-BS72]
gi|168996129|gb|ACA36741.1| stage 0 sporulation protein J [Streptococcus pneumoniae
Hungary19A-6]
gi|220675400|emb|CAR70002.1| putative chromosome partitioning protein ParB [Streptococcus
pneumoniae ATCC 700669]
gi|225723166|gb|ACO19019.1| stage 0 sporulation protein J [Streptococcus pneumoniae JJA]
gi|301800972|emb|CBW33634.1| putative chromosome partitioning protein ParB [Streptococcus
pneumoniae OXC141]
Length = 252
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 83/259 (32%), Positives = 147/259 (56%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L +P +++ + ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLRSIPAVVKQISDQEMMVQSIIENLQRENLNPIEEARAYESLVEK-GFTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR +++N +R+L LP + + ++S HAR+LV +
Sbjct: 121 EIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHARSLVGLNKEQQDYFF----- 175
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
R EE + + + +K + ++ ++ + EK++ +GL++ IK + + G+
Sbjct: 176 --QRIIEEDISVRKLETLLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ I + L
Sbjct: 234 IIISFSNQEEYSRIINSLK 252
>gi|15902043|ref|NP_346647.1| spspoJ protein [Streptococcus pneumoniae TIGR4]
gi|15904087|ref|NP_359637.1| chromosome segregation protein [Streptococcus pneumoniae R6]
gi|111658630|ref|ZP_01409280.1| hypothetical protein SpneT_02000220 [Streptococcus pneumoniae
TIGR4]
gi|116515747|ref|YP_817448.1| SpoJ protein [Streptococcus pneumoniae D39]
gi|148988885|ref|ZP_01820300.1| hypothetical protein CGSSp6BS73_07403 [Streptococcus pneumoniae
SP6-BS73]
gi|148993608|ref|ZP_01823079.1| SpoJ protein [Streptococcus pneumoniae SP9-BS68]
gi|148997958|ref|ZP_01825471.1| SpoJ protein [Streptococcus pneumoniae SP11-BS70]
gi|149003108|ref|ZP_01828017.1| hypothetical protein CGSSp14BS69_11515 [Streptococcus pneumoniae
SP14-BS69]
gi|149007717|ref|ZP_01831326.1| SpoJ protein [Streptococcus pneumoniae SP18-BS74]
gi|168484308|ref|ZP_02709260.1| stage 0 sporulation protein J [Streptococcus pneumoniae CDC1873-00]
gi|168487220|ref|ZP_02711728.1| stage 0 sporulation protein J [Streptococcus pneumoniae CDC1087-00]
gi|168489312|ref|ZP_02713511.1| stage 0 sporulation protein J [Streptococcus pneumoniae SP195]
gi|168491770|ref|ZP_02715913.1| stage 0 sporulation protein J [Streptococcus pneumoniae CDC0288-04]
gi|168494000|ref|ZP_02718143.1| stage 0 sporulation protein J [Streptococcus pneumoniae CDC3059-06]
gi|168576110|ref|ZP_02722015.1| stage 0 sporulation protein J [Streptococcus pneumoniae MLV-016]
gi|194397021|ref|YP_002038836.1| ParB-like partition protein [Streptococcus pneumoniae G54]
gi|225857808|ref|YP_002739319.1| stage 0 sporulation protein J [Streptococcus pneumoniae P1031]
gi|237651053|ref|ZP_04525305.1| stage 0 sporulation protein J [Streptococcus pneumoniae CCRI 1974]
gi|237821166|ref|ZP_04597011.1| stage 0 sporulation protein J [Streptococcus pneumoniae CCRI
1974M2]
gi|303254901|ref|ZP_07340986.1| ParB-like partition protein [Streptococcus pneumoniae BS455]
gi|307068852|ref|YP_003877818.1| putative transcriptional regulator [Streptococcus pneumoniae AP200]
gi|307128503|ref|YP_003880534.1| stage 0 sporulation protein J [Streptococcus pneumoniae 670-6B]
gi|14973751|gb|AAK76287.1| spspoJ protein [Streptococcus pneumoniae TIGR4]
gi|15459754|gb|AAL00848.1| Chromosome segregation protein [Streptococcus pneumoniae R6]
gi|116076323|gb|ABJ54043.1| SpoJ protein [Streptococcus pneumoniae D39]
gi|147755968|gb|EDK63011.1| SpoJ protein [Streptococcus pneumoniae SP11-BS70]
gi|147758849|gb|EDK65845.1| hypothetical protein CGSSp14BS69_11515 [Streptococcus pneumoniae
SP14-BS69]
gi|147760712|gb|EDK67684.1| SpoJ protein [Streptococcus pneumoniae SP18-BS74]
gi|147925696|gb|EDK76772.1| hypothetical protein CGSSp6BS73_07403 [Streptococcus pneumoniae
SP6-BS73]
gi|147927829|gb|EDK78851.1| SpoJ protein [Streptococcus pneumoniae SP9-BS68]
gi|172042415|gb|EDT50461.1| stage 0 sporulation protein J [Streptococcus pneumoniae CDC1873-00]
gi|183569918|gb|EDT90446.1| stage 0 sporulation protein J [Streptococcus pneumoniae CDC1087-00]
gi|183572315|gb|EDT92843.1| stage 0 sporulation protein J [Streptococcus pneumoniae SP195]
gi|183574006|gb|EDT94534.1| stage 0 sporulation protein J [Streptococcus pneumoniae CDC0288-04]
gi|183575988|gb|EDT96516.1| stage 0 sporulation protein J [Streptococcus pneumoniae CDC3059-06]
gi|183578044|gb|EDT98572.1| stage 0 sporulation protein J [Streptococcus pneumoniae MLV-016]
gi|194356688|gb|ACF55136.1| ParB-like partition protein [Streptococcus pneumoniae G54]
gi|225726002|gb|ACO21854.1| stage 0 sporulation protein J [Streptococcus pneumoniae P1031]
gi|301795149|emb|CBW37623.1| putative chromosome partitioning protein ParB [Streptococcus
pneumoniae INV104]
gi|302598172|gb|EFL65233.1| ParB-like partition protein [Streptococcus pneumoniae BS455]
gi|306410389|gb|ADM85816.1| Predicted transcriptional regulator [Streptococcus pneumoniae
AP200]
gi|306485565|gb|ADM92434.1| stage 0 sporulation protein J [Streptococcus pneumoniae 670-6B]
gi|332071322|gb|EGI81817.1| stage 0 sporulation protein J [Streptococcus pneumoniae GA17545]
gi|332071684|gb|EGI82177.1| stage 0 sporulation protein J [Streptococcus pneumoniae GA17570]
gi|332077807|gb|EGI88266.1| stage 0 sporulation protein J [Streptococcus pneumoniae GA41301]
gi|332198656|gb|EGJ12739.1| stage 0 sporulation protein J [Streptococcus pneumoniae GA41317]
gi|332198864|gb|EGJ12946.1| stage 0 sporulation protein J [Streptococcus pneumoniae GA47368]
gi|332199067|gb|EGJ13148.1| stage 0 sporulation protein J [Streptococcus pneumoniae GA47901]
Length = 252
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 80/259 (30%), Positives = 144/259 (55%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L +P +++ + ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLRSIPAVVKQISDQEMMVQSIIENLQRENLNPIEEARAYESLVEK-GFTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR +++N +R+L LP + + ++S HAR+LV + +
Sbjct: 121 EIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHARSLVGLNKEQQDYFFQRIIE 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + +K + ++ ++ + EK++ +GL++ IK + + G+
Sbjct: 181 EDISVRKLEALL-------TEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ I + L
Sbjct: 234 IIISFSNQEEYSRIINSLK 252
>gi|283782570|ref|YP_003373324.1| ParB-like protein [Gardnerella vaginalis 409-05]
gi|283441731|gb|ADB14197.1| ParB-like protein [Gardnerella vaginalis 409-05]
Length = 450
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 100/293 (34%), Positives = 156/293 (53%), Gaps = 17/293 (5%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDC------ISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
IGE N + + K + P + IVPN H PR F+ + L +L SIK
Sbjct: 153 IGEKNNAAEKSNKTAKNEPLKPVKGGYLAYLKPLDIVPNAHQPRTIFDEDELRELASSIK 212
Query: 72 SHGIIQPLIVRAI--------DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
G++QP++VR I Y++I GERR+RA+++A L VP I+R +++ L
Sbjct: 213 EVGVLQPIVVRPIVDADKNDEQIAHYELIMGERRWRASQLAELDTVPAIVRTTADENMLR 272
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
A++EN+ R LNPLEEA Y Q+I ++G TQ + V KSR +AN LR+L LP+SV+
Sbjct: 273 DALLENLHRVALNPLEEAAAYSQMIDDFGLTQIQLSQSVSKSRPQIANTLRLLNLPASVQ 332
Query: 184 EMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ + +S GHAR L+ + D SLA I+++ +SVR TEE+V ++
Sbjct: 333 KHVASGVLSAGHARALLGLENPEDMESLANRIIAEGLSVRSTEEIVSLKNEDTSHGAVRT 392
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
R + + + K++ +SIK N G+ I + + E+++ I LL
Sbjct: 393 RVRRNNQWSSSPVRKQLEEHFATKVSIKGTENHGRIEIVFSSPEEMQRIIGLL 445
>gi|308235525|ref|ZP_07666262.1| ParB-like protein [Gardnerella vaginalis ATCC 14018]
gi|311114007|ref|YP_003985228.1| plasmid partition ParA protein [Gardnerella vaginalis ATCC 14019]
gi|310945501|gb|ADP38205.1| plasmid partition ParA protein [Gardnerella vaginalis ATCC 14019]
Length = 426
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 95/286 (33%), Positives = 163/286 (56%), Gaps = 12/286 (4%)
Query: 20 EVNQSIDSPEKKTETIPES-QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+++ ++ K+ + + + IVPN H PR F+ E L++L SIK G++QP
Sbjct: 136 TIDEKHNAENKELKPVEGGYLAYLDPTDIVPNAHQPRTIFDEEELQELAASIKEVGVLQP 195
Query: 79 LIVRAI--------DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
++VR I N Y++I GERR+RA ++A L +VP I+R +++ L A++EN+
Sbjct: 196 IVVRKINNVDQEDTHNAHYELIMGERRWRATQLAGLKKVPAIVRTTSDENMLRDALLENL 255
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
R LNPLEEA Y Q+I ++G TQ + V KSR +AN LR+L LP+SV++ +
Sbjct: 256 HRVALNPLEEAAAYAQMIDDFGLTQVQLSKSVSKSRPQIANTLRLLNLPASVQKHVASGV 315
Query: 191 ISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GHAR L ++ + SLA+ I+++ +SVR TEE+V + + ++ K R +
Sbjct: 316 LSAGHARALLALPTSEEMESLAKRIIAEGLSVRSTEEIVSIRVDNSDESSKRNRVQRNNK 375
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + K++ + ++IK N G+ I + + E+++ I +L
Sbjct: 376 WAHSPIRKQLENIFSTKVAIKGTENHGRIEIVFSSPEEMQRIFDIL 421
>gi|88608392|ref|YP_505904.1| ParB family chromosome partitioning protein [Neorickettsia sennetsu
str. Miyayama]
gi|88600561|gb|ABD46029.1| chromosome partitioning protein, ParB family [Neorickettsia
sennetsu str. Miyayama]
Length = 256
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 100/260 (38%), Positives = 151/260 (58%), Gaps = 8/260 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E+ + ++ + N PR F+ + +L +SIK +G+IQP+IVR +IAGE
Sbjct: 4 NENIVHLKLNEVDVNDFQPRKVFDEASIAELEESIKRNGLIQPIIVRKFGERYK-LIAGE 62
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA + +P I+R+ +K+SLE+AIVEN+QRKDL PLEEA Y++LI E+ Y
Sbjct: 63 RRLRAMRNLGAETIPSIVRDFTDKTSLEVAIVENIQRKDLTPLEEAEAYKRLIDEFNYKH 122
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ SIVGKSRSHV N LRIL LP ++E++ + ISLGH + L + D +A+ I
Sbjct: 123 VELASIVGKSRSHVTNHLRILSLPKRIKELLEENRISLGHVKLLTNVEDSEKMAEKIARL 182
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-G 274
+SVR E L+++ K + +K L LEKKIS ++G+ ++I K G
Sbjct: 183 SLSVRQAENLLRDARK------KNNPHANKKSHELCMLEKKISERLGMKVTITDSERKNG 236
Query: 275 QFCIKYETNEQLKIICSLLG 294
I ++ ++L+ I L
Sbjct: 237 NVKITFKNLDELQDILERLS 256
>gi|2109444|gb|AAC45335.1| SPSpoJ [Streptococcus pneumoniae]
Length = 252
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 79/259 (30%), Positives = 141/259 (54%), Gaps = 9/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L +P +++ + ++ + +I+EN+QR++LNP+EEA Y + E G+T
Sbjct: 62 RYRASLLAGLRSIPAVVKQISDQEMMVQSIIENLQRENLNPIEEARAY-VSLVEKGFTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I GKSR +++N +R+L LP + + ++S HAR+LV + +
Sbjct: 121 EIADKEGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHARSLVGLNKEQQDYFFQRIIE 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQ 275
+ + +K + ++ ++ + EK++ +GL++ IK + + G+
Sbjct: 181 EDISVRKLEALL-------TEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGK 233
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ I + L
Sbjct: 234 IIISFSNQEEYSRIINSLK 252
>gi|119026642|ref|YP_910487.1| chromosome partitioning protein [Bifidobacterium adolescentis ATCC
15703]
gi|118766226|dbj|BAF40405.1| probable chromosome partitioning protein [Bifidobacterium
adolescentis ATCC 15703]
Length = 428
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 86/303 (28%), Positives = 149/303 (49%), Gaps = 30/303 (9%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + + PN H PR F+ + L +L +SIK G++QP+
Sbjct: 122 TPTEHKKDEPELLPVQGGYLVELRLSDVGPNLHQPRTIFDEDDLRELAESIKEVGVLQPI 181
Query: 80 IVRAIDNG--------------------------LYKIIAGERRFRAAKMASLSEVPVII 113
+VR +Y++I GERR+RA+++A L +P I+
Sbjct: 182 VVRKRPQSQIEAARREATAKPAEPHNMFDGRMDSMYELIMGERRWRASQIAGLKTIPAIV 241
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
+ + L A++EN+ R LNPLEEA Y+Q+I ++G TQ + V KSR +AN L
Sbjct: 242 KTTADDDMLRDALLENLHRVALNPLEEAAAYQQMIDDFGLTQAQLSKSVSKSRPQIANTL 301
Query: 174 RILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
R+L LP++V++ + +S GHAR L + +D LA I+++ +SVR TEE+V +
Sbjct: 302 RLLNLPAAVQKKVASGLLSAGHARALLGLPTEADMEQLATRIIAEGLSVRSTEEIVSMKA 361
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
+ ++ KK ++ + + G +SIK G+ I +++ + ++ I
Sbjct: 362 AESDQPKKPKASKLNPWAGTP-VQVGLEQRFGTKVSIKGSKKHGRIEIVFKSEDDMERIV 420
Query: 291 SLL 293
LL
Sbjct: 421 DLL 423
>gi|56417250|ref|YP_154324.1| chromosome partitioning protein [Anaplasma marginale str. St.
Maries]
gi|56388482|gb|AAV87069.1| chromosome partitioning protein [Anaplasma marginale str. St.
Maries]
Length = 275
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 106/290 (36%), Positives = 164/290 (56%), Gaps = 18/290 (6%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
KR LG+G+ LIGE +S E+ I ++ + P PR F+ +++L
Sbjct: 2 KRSLGKGILELIGE-----ESEGDAATLTMEAPTRIRVNMLHPGRFQPRRKFDQAAIKEL 56
Query: 67 CQSIKSHGIIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
SI +G+IQP+IVR Y+IIAGERR+RA+ A L +VPVI+RNV + LEI+
Sbjct: 57 ASSIARNGLIQPIIVRKDAVGDRYEIIAGERRWRASIAAKLVDVPVIVRNVSDSKCLEIS 116
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL LEEA Y++LI E+ +T + +I+G+SRSH+ NILRIL LP SV+ M
Sbjct: 117 VIENIQREDLTALEEAESYKKLIDEFNHTHESLAAILGRSRSHITNILRILTLPDSVKRM 176
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
I IS GHAR L+ +P LA+ I+S MSVR+TE +V++ N + +
Sbjct: 177 ISDRSISFGHARCLLGAENPEELAERILSSGMSVRETEAMVKDLQNHTDIVQAT------ 230
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+E + ++ + ++ K I + + E+ + +L +
Sbjct: 231 ----TMRIESFMPGRLDTEVRVRKSGKK--LTINFTSEEKCEDFFKMLDK 274
>gi|298253271|ref|ZP_06977063.1| stage 0 sporulation protein J [Gardnerella vaginalis 5-1]
gi|297532666|gb|EFH71552.1| stage 0 sporulation protein J [Gardnerella vaginalis 5-1]
Length = 450
Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 100/293 (34%), Positives = 155/293 (52%), Gaps = 17/293 (5%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDC------ISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
IGE N + + K + P + IVPN H PR F+ + L +L SIK
Sbjct: 153 IGEKNNAAEKSNKTAKNEPLKPVKGGYLAYLKPLDIVPNAHQPRTIFDEDELRELASSIK 212
Query: 72 SHGIIQPLIVRAI--------DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
G++QP++VR I Y++I GERR+RA+++A L VP I+R +++ L
Sbjct: 213 EVGVLQPIVVRPIVDADKNDEQIAHYELIMGERRWRASQLAELDTVPAIVRTTADENMLR 272
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
A++EN+ R LNPLEEA Y Q+I ++G TQ + V KSR +AN LR+L LP+SV+
Sbjct: 273 DALLENLHRVALNPLEEAAAYSQMIDDFGLTQIQLSQSVSKSRPQIANTLRLLNLPASVQ 332
Query: 184 EMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ + +S GHAR L+ + D SLA I+++ +SVR TEE+V ++
Sbjct: 333 KHVASGVLSAGHARALLGLENPEDMESLANRIIAEGLSVRSTEEIVSLKNEDTSHGAART 392
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
R + + K++ +SIK N G+ I + + E+++ I LL
Sbjct: 393 RVRRNNRWSSSPVRKQLEEHFATKVSIKGTENHGRIEIVFSSPEEMQRIIGLL 445
>gi|297243212|ref|ZP_06927147.1| stage 0 sporulation protein J [Gardnerella vaginalis AMD]
gi|296888746|gb|EFH27483.1| stage 0 sporulation protein J [Gardnerella vaginalis AMD]
Length = 452
Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 161/299 (53%), Gaps = 17/299 (5%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDC------ISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
GE N++++ K + P + IVPN H PR F+ + L +L SIK
Sbjct: 153 FGEKNKAVEKSNKTAKNEPLKPVKGGYLAYLKPLDIVPNAHQPRTIFDEDELRELASSIK 212
Query: 72 SHGIIQPLIVRAI--------DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
G++QP++VR I Y++I GERR+RA+++A L VP I+R +++ L
Sbjct: 213 EVGVLQPIVVRPIVDADKNDEQIAHYELIMGERRWRASQLAELDTVPAIVRTTADENMLR 272
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
A++EN+ R LNPLEEA Y Q+I ++G TQ + V KSR +AN LR+L LP+SV+
Sbjct: 273 DALLENLHRVALNPLEEAAAYSQMIDDFGLTQIQLSQSVSKSRPQIANTLRLLNLPASVQ 332
Query: 184 EMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ + +S GHAR L+ + D SLA+ I+++ +SVR TEE+V ++
Sbjct: 333 KHVASGVLSAGHARALLGLENPEDMESLAKRIIAEGLSVRSTEEIVSLKNEDTSHGAVRT 392
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
R + + + K++ +SIK N G+ I + + E+++ I LL + + +
Sbjct: 393 RVRRNNQWSSSPVRKQLEEHFATKVSIKGTENHGRIEIVFSSPEEMQRIIGLLVDGNGK 451
>gi|320547710|ref|ZP_08041995.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
equinus ATCC 9812]
gi|320447785|gb|EFW88543.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
equinus ATCC 9812]
Length = 260
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 96/260 (36%), Positives = 157/260 (60%), Gaps = 4/260 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ + I+I I PNP+ PR F+ E LE+L +SIK++G+IQP+IVR Y++IAGER
Sbjct: 3 ETLNLINIDDISPNPYQPRLEFKQEELEELSRSIKANGLIQPIIVRKSAIFGYELIAGER 62
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R +A+KMA LSE+P II+ + NK S+++AIVEN+QR DLNP+EEA Y+QL+ T
Sbjct: 63 RLKASKMAGLSEIPAIIKEISNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDRNQMTHE 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ +GKSR ++ N LR+L LPS++ + + + ++S GHAR L++ + + K
Sbjct: 123 ELAQFMGKSRPYITNCLRLLNLPSAISKAVERGQLSQGHARVLLTLKNKKEQEKWYQ--K 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN--KG 274
+ + E+ KK K K EK ++ E+++S +G+ +S+ + KG
Sbjct: 181 VITEEISVRKLEELVKKSKPTKKSSKKNEKNIFIRHQEEELSKLLGVPVSLSLAKSGFKG 240
Query: 275 QFCIKYETNEQLKIICSLLG 294
+++++ E I + L
Sbjct: 241 DLQLRFQSEEDFNRIINRLK 260
>gi|225352371|ref|ZP_03743394.1| hypothetical protein BIFPSEUDO_03988 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156878|gb|EEG70247.1| hypothetical protein BIFPSEUDO_03988 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 451
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 88/302 (29%), Positives = 149/302 (49%), Gaps = 30/302 (9%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + + + + PN H PR F+ + L +L SIK G++QP++
Sbjct: 145 TEDKKNDEPELLPVQGGYLVELRLSDVGPNLHQPRTIFDEDDLRELADSIKEVGVLQPIV 204
Query: 81 VRAID--------------------------NGLYKIIAGERRFRAAKMASLSEVPVIIR 114
VR + +Y++I GERR+RA+++A L +P I++
Sbjct: 205 VRKRPLAQIEAARKENAAKDAESHNMFDGRMDSMYELIMGERRWRASQIAGLKTIPAIVK 264
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+ L A++EN+ R LNPLEEA Y+Q+I ++G TQ + V KSR +AN LR
Sbjct: 265 TTADDDMLRDALLENLHRVALNPLEEAAAYQQMIDDFGLTQAQLSKSVSKSRPQIANTLR 324
Query: 175 ILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
+L LP++V++ + +S GHAR L + +D LA I+S+ +SVR TEE+V +
Sbjct: 325 LLNLPATVQKKVASGLLSAGHARALLGLPTEADMEQLATRIISEGLSVRSTEEIVSMKVA 384
Query: 232 KKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICS 291
+ ++ KK ++ + + G +SIK G+ I +++ + +K I
Sbjct: 385 ESDQPKKAKTNKLNPWAGTP-MQVGLEKRFGTKVSIKGSKEHGRIEIVFKSEDDMKRIVD 443
Query: 292 LL 293
LL
Sbjct: 444 LL 445
>gi|306824003|ref|ZP_07457377.1| plasmid partition ParA protein [Bifidobacterium dentium ATCC 27679]
gi|309801940|ref|ZP_07696054.1| ParB-like protein [Bifidobacterium dentium JCVIHMP022]
gi|304553001|gb|EFM40914.1| plasmid partition ParA protein [Bifidobacterium dentium ATCC 27679]
gi|308221388|gb|EFO77686.1| ParB-like protein [Bifidobacterium dentium JCVIHMP022]
Length = 435
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 88/310 (28%), Positives = 149/310 (48%), Gaps = 37/310 (11%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + + + + + PN H PR F+ + L +L SI+ G++QP+
Sbjct: 123 ESSDKKSEEPELLPVQGGYLVELRLSDVGPNLHQPRTIFDEDDLHELADSIQEVGVLQPI 182
Query: 80 IVRAIDNG---------------------------------LYKIIAGERRFRAAKMASL 106
+VR + +Y++I GERR+RA+++A L
Sbjct: 183 VVRKRPSEQIEAARKEQREQAQESAKNASEAHNMFEGRMDSMYELIMGERRWRASQIAGL 242
Query: 107 SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSR 166
+P I++ + L A++EN+ R LNPLEEA Y+Q+I ++G TQ + V KSR
Sbjct: 243 KTIPAIVKTTADDDMLRDALLENLHRVALNPLEEAAAYQQMIDDFGLTQAQLSKSVSKSR 302
Query: 167 SHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTE 223
+AN LR+L LP+ V++ + +S GHAR L + SD LA I+S+ +SVR TE
Sbjct: 303 PQIANTLRLLHLPAVVQKKVASGLLSAGHARALLGLPAESDMEQLATRIISEGLSVRSTE 362
Query: 224 ELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETN 283
E+V + ++ ++ KK ++ + + G +SIK G+ I +++
Sbjct: 363 EIVSMKVSESDQPKKPKANKLNPWAGTP-VQMGLEQRFGTKVSIKGSKKHGRIEIVFKSE 421
Query: 284 EQLKIICSLL 293
+ + I LL
Sbjct: 422 DDMNRIVDLL 431
>gi|212715140|ref|ZP_03323268.1| hypothetical protein BIFCAT_00026 [Bifidobacterium catenulatum DSM
16992]
gi|212661821|gb|EEB22396.1| hypothetical protein BIFCAT_00026 [Bifidobacterium catenulatum DSM
16992]
Length = 451
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 151/301 (50%), Gaps = 30/301 (9%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ ++ + + + + PN H PR F+ + L +L SIK G++QP++V
Sbjct: 146 EDAKNNEPELLPVQGGYLVELRLSDVGPNLHQPRTIFDEDDLRELADSIKEVGVLQPIVV 205
Query: 82 RAID--------------------------NGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
R + +Y++I GERR+RA+++A L +P I++
Sbjct: 206 RKRPLAQIEAARKENVASNDESHNMFDGRMDSMYELIMGERRWRASQIAGLKTIPAIVKT 265
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+ L A++EN+ R LNPLEEA Y+Q+I ++G TQ + V KSR +AN LR+
Sbjct: 266 TADDDMLRDALLENLHRVALNPLEEAAAYQQMIDDFGLTQAQLSKSVSKSRPQIANTLRL 325
Query: 176 LKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
L LP++V++ + +S GHAR L + +D LA I+S+ +SVR TEE+V + +
Sbjct: 326 LNLPATVQKKVASGLLSAGHARALLGLPTEADMEQLATRIISEGLSVRSTEEIVSMKAAE 385
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
++ KK ++ + K G +SIK G+ I +++ + +K I +
Sbjct: 386 SDQPKKAKTNKLNPWAGTP-MQLGLEKKFGTKVSIKGSKEHGRIEIVFKSEDDMKRIVDM 444
Query: 293 L 293
L
Sbjct: 445 L 445
>gi|257459086|ref|ZP_05624205.1| stage 0 sporulation protein J [Campylobacter gracilis RM3268]
gi|257443471|gb|EEV18595.1| stage 0 sporulation protein J [Campylobacter gracilis RM3268]
Length = 287
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 102/291 (35%), Positives = 166/291 (57%), Gaps = 11/291 (3%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
KR LGRGL A++ +V S + E ++ I + I PNP+ PR F+ E L L
Sbjct: 5 KRALGRGLGAILDDVESSYNR-ELESGNADSLVIEIDVDKIEPNPYQPRQSFDEEALRQL 63
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
+SI HG+IQP+IV D+ +IAGERR RA K+ S++ ++ ++ +++ E+A+
Sbjct: 64 SESIARHGLIQPIIVIQKDDSYV-LIAGERRLRATKLLGESKIKAVVADIKSQNLRELAL 122
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLNP+E A Y++LI EY TQ ++ I+ KSR+ + N LR+L L S V++ I
Sbjct: 123 IENIQREDLNPIELAKSYKELIGEYRITQEELADIIKKSRTQITNTLRLLNLCSEVQDAI 182
Query: 187 RKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS- 243
++IS GHA+ +V + I+ +++SVRDTE LV++ +K ++K
Sbjct: 183 SADKISQGHAKIMVGLEKEDQILALNTILGQRLSVRDTETLVKKLKDKTVPKEKKPGVEF 242
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + L L+ K+ + G ISIK R + I++ Q+ +G
Sbjct: 243 QSFKPELLKLKAKL-DQFG-KISIKER----KISIEFNEILQISEFLKKIG 287
>gi|54298884|ref|YP_125253.1| hypothetical protein lpp2951 [Legionella pneumophila str. Paris]
gi|53752669|emb|CAH14104.1| hypothetical protein lpp2951 [Legionella pneumophila str. Paris]
Length = 301
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 104/294 (35%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGR L+ ++QS S + E Q +++ + P + PR E L
Sbjct: 3 VKRSSLGRNLS---ALLSQSSSSLLANEQPQTEQQLKLAVTCLQPGKYQPRGGMEEAPLN 59
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK G++QPL+VR +DNG Y+IIAGERR+RA+++A L+EVPVI++ VD+++++ +
Sbjct: 60 ELAQSIKKQGVLQPLLVRELDNGKYEIIAGERRWRASQLAGLTEVPVILKQVDDETAMAM 119
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLN +++A +L +E+ T + ++ KSR+ V+N LR+L L + V++
Sbjct: 120 ALVENLQREDLNAMDQARAMYRLTNEFALTHQQVADLLCKSRTAVSNFLRLLSLSTPVKK 179
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ +I +GHAR L + +AQ+I++K +SVR+TE+LV+ N K + K +
Sbjct: 180 LLENGDIDMGHARALLALDEEQQSQVAQLIIAKNLSVRETEQLVERVKNGKPELKTHHKD 239
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ L L K + +K+ L + + KG I YE + L+ I L N
Sbjct: 240 NPMFKEQLNSLAKHLQTKIKLK---QGKTGKGTLVIHYENDHNLQKIIEQLLGN 290
>gi|149013384|ref|ZP_01834093.1| SpoJ protein [Streptococcus pneumoniae SP19-BS75]
gi|182685176|ref|YP_001836923.1| spoJ protein [Streptococcus pneumoniae CGSP14]
gi|303259726|ref|ZP_07345702.1| spoJ protein [Streptococcus pneumoniae SP-BS293]
gi|303262193|ref|ZP_07348138.1| spoJ protein [Streptococcus pneumoniae SP14-BS292]
gi|303265389|ref|ZP_07351296.1| spoJ protein [Streptococcus pneumoniae BS397]
gi|303266063|ref|ZP_07351957.1| spoJ protein [Streptococcus pneumoniae BS457]
gi|303268471|ref|ZP_07354265.1| spoJ protein [Streptococcus pneumoniae BS458]
gi|147762907|gb|EDK69855.1| SpoJ protein [Streptococcus pneumoniae SP19-BS75]
gi|182630510|gb|ACB91458.1| spoJ protein [Streptococcus pneumoniae CGSP14]
gi|301802902|emb|CBW35683.1| putative chromosome partitioning protein ParB [Streptococcus
pneumoniae INV200]
gi|302636833|gb|EFL67323.1| spoJ protein [Streptococcus pneumoniae SP14-BS292]
gi|302639278|gb|EFL69737.1| spoJ protein [Streptococcus pneumoniae SP-BS293]
gi|302641972|gb|EFL72325.1| spoJ protein [Streptococcus pneumoniae BS458]
gi|302644367|gb|EFL74620.1| spoJ protein [Streptococcus pneumoniae BS457]
gi|302645066|gb|EFL75306.1| spoJ protein [Streptococcus pneumoniae BS397]
Length = 252
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 154/261 (59%), Gaps = 13/261 (4%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + ISI I NP+ PR F+ E L++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A L +P +++ + ++ + +I+EN+QR++LNP+EEA YE L+ + G+T
Sbjct: 62 RYRASLLAGLRSIPAVVKQISDQEMMVQSIIENLQRENLNPIEEARAYESLVEK-GFTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVS 214
+I +GKSR +++N +R+L LP + + ++S HAR+LV + Q I+
Sbjct: 121 EIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHARSLVGLNKEQQDYFFQRIIE 180
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNK 273
+ +SVR E L+ E+ KK+++ ++ + EK++ +GL++ IK + +
Sbjct: 181 EDISVRKLEALLTEKKQKKQQKTNY---------FIQNEEKQLRKLLGLDVEIKLSKKDS 231
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G+ I + E+ I + L
Sbjct: 232 GKIIIYFSNQEEYSRIINSLK 252
>gi|171741741|ref|ZP_02917548.1| hypothetical protein BIFDEN_00832 [Bifidobacterium dentium ATCC
27678]
gi|283457082|ref|YP_003361646.1| chromosome partitioning protein ParB [Bifidobacterium dentium Bd1]
gi|171277355|gb|EDT45016.1| hypothetical protein BIFDEN_00832 [Bifidobacterium dentium ATCC
27678]
gi|283103716|gb|ADB10822.1| Chromosome partitioning protein ParB [Bifidobacterium dentium Bd1]
Length = 435
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 88/310 (28%), Positives = 150/310 (48%), Gaps = 37/310 (11%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + + + + + + PN H PR F+ + L +L SI+ G++QP+
Sbjct: 123 ESSDKKNEEPELLPVQGGYLVELRLSDVGPNLHQPRTIFDEDDLRELADSIQEVGVLQPI 182
Query: 80 IVRAIDNG---------------------------------LYKIIAGERRFRAAKMASL 106
+VR + +Y++I GERR+RA+++A L
Sbjct: 183 VVRKRPSEQIEAARKEQREQAQESAKNASEAHNMFEARMDSMYELIMGERRWRASQIAGL 242
Query: 107 SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSR 166
+P I++ + L A++EN+ R LNPLEEA Y+Q+I ++G TQ + V KSR
Sbjct: 243 KTIPAIVKTTADDDMLRDALLENLHRVALNPLEEAAAYQQMIDDFGLTQAQLSKSVSKSR 302
Query: 167 SHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTE 223
+AN LR+L LP+ V++ + +S GHAR L + SD LA I+S+ +SVR TE
Sbjct: 303 PQIANTLRLLHLPAVVQKKVASGLLSAGHARALLGLPAESDMEQLATRIISEGLSVRSTE 362
Query: 224 ELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETN 283
E+V + ++ ++ KK ++ + + G +SIK G+ I +++
Sbjct: 363 EIVSMKVSESDQPKKPKANKLNPWAGTP-VQMGLEQRFGTKVSIKGSKKHGRIEIVFKSE 421
Query: 284 EQLKIICSLL 293
+ + I LL
Sbjct: 422 DDMNRIVDLL 431
>gi|254498390|ref|ZP_05111121.1| chromosome partitioning protein [Legionella drancourtii LLAP12]
gi|254352349|gb|EET11153.1| chromosome partitioning protein [Legionella drancourtii LLAP12]
Length = 267
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 94/259 (36%), Positives = 154/259 (59%), Gaps = 3/259 (1%)
Query: 43 SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAK 102
++ + P PR F L +L SI + GIIQPLIVR + Y+IIAGERR+RAA
Sbjct: 2 AVDLLSPGRFQPRKQFNESILAELSDSILAQGIIQPLIVRRVAEEKYEIIAGERRWRAAT 61
Query: 103 MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
+A LS VP IIRN+++K +L +++EN+QR+DLNP+EEA+ + + E+ T +I +++
Sbjct: 62 IAGLSYVPAIIRNIEDKVALAFSVIENIQREDLNPIEEAIAFSRFREEFQMTHEEIANML 121
Query: 163 GKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVR 220
G+SR+ V N LR+L L S VR M+ + I +GHARTL++ A +I +K+SVR
Sbjct: 122 GRSRASVTNTLRLLTLDSRVRLMLEEGSIDMGHARTLLTLDSEQQYLVACLIKERKLSVR 181
Query: 221 DTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIK 279
+ EEL ++ + K ++ + D ++S K N+S+K ++ KG+ I+
Sbjct: 182 EAEELSNTFKLERNENNKKNMPIQKYHEKCGDWSHQLSQKFATNVSVKVNQEGKGKVVIE 241
Query: 280 YETNEQLKIICSLLGENDF 298
+ +++ I + + E +
Sbjct: 242 VNSPDEVDWIVNFMNEINE 260
>gi|54295427|ref|YP_127842.1| hypothetical protein lpl2513 [Legionella pneumophila str. Lens]
gi|53755259|emb|CAH16753.1| hypothetical protein lpl2513 [Legionella pneumophila str. Lens]
Length = 263
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 97/262 (37%), Positives = 157/262 (59%), Gaps = 7/262 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + S+ + PR F L++L QSI S G+I+PL+VR I Y+IIAGE
Sbjct: 2 QTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK+A L+EVP +I + ++ + + ++EN+QR+DLN +EEA GY++LI E+ Y Q
Sbjct: 62 RRWRAAKLAGLNEVPCLIGDYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIV 213
++I ++VGKSRSHVANILR+L L V++++R + +S GHAR LV + A ++
Sbjct: 122 DEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKVLSFGHARVLVGLNPEQQEMFAHQVI 181
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNN 272
++ SVR E+ ++ NK R K + K++ + L+ ++ +VG + I +
Sbjct: 182 GEEWSVRHLEQEIKSYKNKDTNRPK----NPRKDRDIERLQTILAEQVGAPVQIVNDGED 237
Query: 273 KGQFCIKYETNEQLKIICSLLG 294
G +K+ N+ L + LG
Sbjct: 238 GGWLKVKFFDNDTLAGLLERLG 259
>gi|322386433|ref|ZP_08060062.1| chromosome partitioning protein SpoOJ [Streptococcus cristatus ATCC
51100]
gi|321269519|gb|EFX52450.1| chromosome partitioning protein SpoOJ [Streptococcus cristatus ATCC
51100]
Length = 253
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 90/259 (34%), Positives = 151/259 (58%), Gaps = 8/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I + I NP+ PR F E + +L SIK +GIIQP+I+R Y+I+AGER
Sbjct: 2 ENYQYIPLKDIRTNPYQPRKSFSQEKINELAASIKENGIIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAAK+A L +P +I+++ + ++ AI+EN+QR+DLNP+EEA Y+ LI + T
Sbjct: 62 RFRAAKIAGLENIPALIKDLSDDDMMKQAIIENLQREDLNPIEEAESYQHLIEKGL-THE 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++N++R+L+LP+ + + +++E IS GHAR L+ +
Sbjct: 121 EIAKIMGKSRPYISNLVRLLQLPAFMMDAVKEEMISQGHARLLIPLKKEEQVFW------ 174
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQ 275
+ + L ++ K + + KE + E+K+ +GLN++I +N +KG+
Sbjct: 175 LDKIIQDNLSVRALELSLQKTKKAKTKKNKEIFAHSEEEKLKKILGLNVTIHLKNPSKGK 234
Query: 276 FCIKYETNEQLKIICSLLG 294
I +E E+ + I + L
Sbjct: 235 IIIPFENEEEYQRIINSLK 253
>gi|307611470|emb|CBX01139.1| hypothetical protein LPW_28381 [Legionella pneumophila 130b]
Length = 263
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 95/262 (36%), Positives = 156/262 (59%), Gaps = 7/262 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + S+ + PR F L++L QSI S G+I+PL+VR I Y+IIAGE
Sbjct: 2 QTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK+A L+EVP +I + ++ + + ++EN+QR+DLN +EEA GY++LI E+ Y Q
Sbjct: 62 RRWRAAKLAGLNEVPCLIGDYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIV 213
++I ++VGKSRSHVANILR+L L V++++R + +S GHAR L+ + A ++
Sbjct: 122 DEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKVLSFGHARVLIGLNPEQQEMFAHQVI 181
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNN 272
++ SVR E+ ++ NK K + K++ + L+ ++ +VG + I +
Sbjct: 182 GEEWSVRHLEQEIKSYKNKDTNSPK----NPRKDRDIERLQTILAEQVGAPVQIVNDGED 237
Query: 273 KGQFCIKYETNEQLKIICSLLG 294
G +K+ N+ L + LG
Sbjct: 238 GGWLKVKFFDNDTLAGLLERLG 259
>gi|256827809|ref|YP_003151768.1| ParB-like partition protein [Cryptobacterium curtum DSM 15641]
gi|256583952|gb|ACU95086.1| ParB-like partition protein [Cryptobacterium curtum DSM 15641]
Length = 401
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 82/270 (30%), Positives = 160/270 (59%), Gaps = 5/270 (1%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ S + + + ++ PNP PR +F+ E + +L QSI+ G++QP++VR +D+
Sbjct: 131 RETSRPPVKEPSSEEVPLDTVKPNPDQPRTHFDVEEIAELAQSIEKEGLLQPILVRKVDD 190
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G Y+IIAGERR++A K + VP+ +++V+ +LE+A++EN+QR DLNP+EEA GY++
Sbjct: 191 G-YQIIAGERRWQACKKLGMKTVPIRVKDVEGDKALELALIENIQRSDLNPIEEAYGYKR 249
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTS 203
L+ G TQ+++ V K RS +AN LR+L+LP ++++ +E+I+ GHAR ++ +T
Sbjct: 250 LMERQGLTQSEVARAVSKGRSTIANALRLLELPEDAQQLLFEEKITAGHARAILSIPTTE 309
Query: 204 DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
L + + +K+SVR+TE L + + + K+ + + + + + + +
Sbjct: 310 GRQKLVRKLQEEKLSVRETESLARLFAGQLQTNKESVKRTPLPTSF-KRVARGLRENLEA 368
Query: 264 NISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ ++ K + I ++ L+ + + +
Sbjct: 369 DVRVRSVKGKNKIEISFKDEADLQRLFNKI 398
Score = 41.6 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISI 44
M+ + LGRGL +L+GE I+ + + + +S+
Sbjct: 1 MAK-QKRSGLGRGLNSLLGESLGEINQKDADQQQTTADEAAVSV 43
>gi|54298579|ref|YP_124948.1| hypothetical protein lpp2643 [Legionella pneumophila str. Paris]
gi|53752364|emb|CAH13796.1| hypothetical protein lpp2643 [Legionella pneumophila str. Paris]
Length = 263
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 97/262 (37%), Positives = 156/262 (59%), Gaps = 7/262 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + S+ + PR F L++L QSI S G+I+PL+VR I Y+IIAGE
Sbjct: 2 QTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK+A L+EVP +I + ++ + + ++EN+QR+DLN +EEA GY++LI E+ Y Q
Sbjct: 62 RRWRAAKLAGLNEVPCLIGDYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIV 213
++I ++VGKSRSHVANILR+L L V++++R + +S GHAR LV + A I+
Sbjct: 122 DEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKVLSFGHARVLVGLNPEQQEMFAHQII 181
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNN 272
++ SVR E+ ++ NK K + K++ + L+ ++ +VG + I +
Sbjct: 182 GEEWSVRYLEQEIKSYKNKDTNSPK----NPRKDRDIERLQTILAEQVGAPVQIVNDGED 237
Query: 273 KGQFCIKYETNEQLKIICSLLG 294
G +K+ N+ L + LG
Sbjct: 238 GGWLKVKFFDNDTLAGLLERLG 259
>gi|296108234|ref|YP_003619935.1| chromosome partitioning protein ParB [Legionella pneumophila
2300/99 Alcoy]
gi|295650136|gb|ADG25983.1| chromosome partitioning protein ParB [Legionella pneumophila
2300/99 Alcoy]
Length = 263
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 97/262 (37%), Positives = 156/262 (59%), Gaps = 7/262 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + S+ + PR F L++L QSI S G+I+PL+VR I Y+IIAGE
Sbjct: 2 QTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK+A L+EVP +I + ++ + + ++EN+QR+DLN +EEA GY++LI E+ Y Q
Sbjct: 62 RRWRAAKLAGLNEVPCLIGDYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIV 213
++I ++VGKSRSHVANILR+L L V++++R + +S GHAR LV + A I+
Sbjct: 122 DEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKVLSFGHARVLVGLNPEQQEMFAHQII 181
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNN 272
++ SVR E+ ++ NK K + K++ + L+ ++ +VG + I +
Sbjct: 182 GEEWSVRHLEQEIKFYKNKDMNSPK----NPRKDRDIERLQTILAEQVGAPVQIINDGED 237
Query: 273 KGQFCIKYETNEQLKIICSLLG 294
G +K+ N+ L + LG
Sbjct: 238 GGWLKVKFFDNDTLAGLLERLG 259
>gi|148358676|ref|YP_001249883.1| chromosome partitioning protein ParB [Legionella pneumophila str.
Corby]
gi|148280449|gb|ABQ54537.1| chromosome partitioning protein ParB (SpoOJ) [Legionella
pneumophila str. Corby]
Length = 263
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 97/262 (37%), Positives = 156/262 (59%), Gaps = 7/262 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + S+ + PR F L++L QSI S G+I+PL+VR I Y+IIAGE
Sbjct: 2 QTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK+A L+EVP +I + ++ + + ++EN+QR+DLN +EEA GY++LI E+ Y Q
Sbjct: 62 RRWRAAKLAGLNEVPCLIGDYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS--LAQVIV 213
++I ++VGKSRSHVANILR+L L V++++R + +S GHAR LV + A I+
Sbjct: 122 DEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKALSFGHARVLVGLNPETPECFAHQII 181
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNN 272
++ SVR E+ ++ NK K + K++ + L+ ++ +VG + I +
Sbjct: 182 GEEWSVRHLEQEIKFYKNKDMNSPK----NPRKDRDIERLQTILAEQVGAPVQIINDGED 237
Query: 273 KGQFCIKYETNEQLKIICSLLG 294
G +K+ N+ L + LG
Sbjct: 238 GGWLKVKFFDNDTLAGLLERLG 259
>gi|52842796|ref|YP_096595.1| chromosome partitioning protein ParB (SpoOJ) [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|52629907|gb|AAU28648.1| chromosome partitioning protein ParB (SpoOJ) [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 263
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 98/262 (37%), Positives = 157/262 (59%), Gaps = 7/262 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + S+ + PR F L++L QSI S G+I+PL+VR I Y+IIAGE
Sbjct: 2 QTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK+A L+EVP +I + ++ + + ++EN+QR+DLN +EEA GY++LI E+ Y Q
Sbjct: 62 RRWRAAKLAGLNEVPCLIGDYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIV 213
++I ++VGKSRSHVANILR+L L V++++R + +S GHAR LV + AQ I+
Sbjct: 122 DEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKVLSFGHARVLVGLNPEQQEMFAQQII 181
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNN 272
++ SVR E+ ++ NK K + K++ + L+ ++ +VG + I +
Sbjct: 182 GEEWSVRHLEQEIKSYKNKDINSPK----NPRKDRDIERLQTILAEQVGAPVQIVNDGED 237
Query: 273 KGQFCIKYETNEQLKIICSLLG 294
G +K+ N+ L + LG
Sbjct: 238 GGWLKVKFFDNDTLAGLLERLG 259
>gi|154486336|ref|ZP_02027743.1| hypothetical protein BIFADO_00145 [Bifidobacterium adolescentis
L2-32]
gi|154084199|gb|EDN83244.1| hypothetical protein BIFADO_00145 [Bifidobacterium adolescentis
L2-32]
Length = 428
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 87/303 (28%), Positives = 149/303 (49%), Gaps = 30/303 (9%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + + PN H PR F+ + L +L +SIK G++QP+
Sbjct: 122 TPTEHKKDEPELLPVQGGYLVELRLSDVGPNLHQPRTIFDEDDLRELAESIKEVGVLQPI 181
Query: 80 IVRAIDNG--------------------------LYKIIAGERRFRAAKMASLSEVPVII 113
+VR +Y++I GERR+RA+++A L +P I+
Sbjct: 182 VVRKRPQSQIEAARREAAAKPAEPHNMFDGRMDSMYELIMGERRWRASQIAGLKTIPAIV 241
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
+ + L A++EN+ R LNPLEEA Y+Q+I ++G TQ + V KSR +AN L
Sbjct: 242 KTTADDDMLRDALLENLHRVALNPLEEAAAYQQMIDDFGLTQAQLSKSVSKSRPQIANTL 301
Query: 174 RILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
R+L LP++V++ + +S GHAR L + +D LA I+++ +SVR TEE+V +
Sbjct: 302 RLLNLPAAVQKKVASGLLSAGHARALLGLPTEADMEQLATRIIAEGLSVRSTEEIVSMKA 361
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
+ ++ KK ++ + + G +SIK G+ I +++ + +K I
Sbjct: 362 AESDQPKKPKASKLNPWAGTP-VQVGLEQRFGTKVSIKGSKKHGRIEIVFKSEDDMKRIV 420
Query: 291 SLL 293
LL
Sbjct: 421 DLL 423
>gi|268679150|ref|YP_003303581.1| parB-like partition protein [Sulfurospirillum deleyianum DSM 6946]
gi|268617181|gb|ACZ11546.1| parB-like partition protein [Sulfurospirillum deleyianum DSM 6946]
Length = 284
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 97/294 (32%), Positives = 168/294 (57%), Gaps = 14/294 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS K+ LGRGL+A+I +V ++ ++ E + I I I NP+ PR F
Sbjct: 1 MST---KKVLGRGLSAIIEDVEEAY---KQDIEQAKDLVREIDIERITANPYQPRVTFNE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L +SIK HG++QP+IV A DN Y ++AGERR RA+K+A +++ I+ ++++K+
Sbjct: 55 TALKELSESIKRHGLLQPIIVVAKDND-YMLLAGERRLRASKLAGFTKIKAIVADIESKN 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNP+E A+ Y++LI EY TQ+ + I+ KSR+ + N +R+L L
Sbjct: 114 LRELALIENIQREDLNPIELAIAYKELIEEYQITQDGLSEIIHKSRTQITNTIRLLSLSE 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ + + IS GHA+ LV D ++ I+ +K+SVR+TE LV++ N +E K
Sbjct: 174 QTKKYLAEGVISQGHAKVLVGLEPKDEETVVNTILGQKLSVRETEALVKKLKNSEEPVGK 233
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
+ + + L + ++ +G + + I ++ E +
Sbjct: 234 KEKTTINVSEELEMVSVRLKE-LG----FEAKPKSNTITIHFKNGESIHTFLER 282
>gi|148361204|ref|YP_001252411.1| chromosome partitioning protein ParB [Legionella pneumophila str.
Corby]
gi|296108540|ref|YP_003620241.1| chromosome partitioning protein ParB [Legionella pneumophila
2300/99 Alcoy]
gi|148282977|gb|ABQ57065.1| chromosome partitioning protein ParB (SpoOJ) [Legionella
pneumophila str. Corby]
gi|295650442|gb|ADG26289.1| chromosome partitioning protein ParB [Legionella pneumophila
2300/99 Alcoy]
Length = 299
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 104/294 (35%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGR L+ ++QS S + E Q +++ + P + PR E L
Sbjct: 3 VKRSSLGRNLS---ALLSQSSSSLLANEQPQTEQQLKLAVTCLQPGKYQPRGGMEEAPLN 59
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK G++QPL+VR +DNG Y+IIAGERR+RA+++A L+EVPVI++ VD+++++ +
Sbjct: 60 ELAQSIKKQGVLQPLLVRELDNGKYEIIAGERRWRASQLAGLTEVPVILKQVDDETAMAM 119
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLN +++A +L +E+ T + ++ KSR+ V+N LR+L L + V++
Sbjct: 120 ALVENLQREDLNAMDQARAMYRLTNEFALTHQQVADLLCKSRTAVSNFLRLLSLSTPVKK 179
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ +I +GHAR L + +AQ+I++K +SVR+TE+LV+ N K + K +
Sbjct: 180 LLENGDIDMGHARALLALDEEQQSQVAQLIIAKNLSVRETEQLVERVKNGKPELKTHHKD 239
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ ++ L L K + +K+ L + + KG I YE + L+ I L N
Sbjct: 240 NPMFKEQLNSLAKHLQTKIKLK---QGKTGKGTLIIHYENDHNLQKIIEQLLGN 290
>gi|46445711|ref|YP_007076.1| putative chromosome partitioning protein [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399352|emb|CAF22801.1| putative chromosome partitioning protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 260
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 83/245 (33%), Positives = 133/245 (54%), Gaps = 1/245 (0%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV-RAIDNGLYKIIAGERRF 98
+ + I NP+ PR F+ E L++L SIK+ GII P +V D+ Y++IAGERRF
Sbjct: 2 REVLLSQIQINPYQPRREFKKEELQELADSIKAVGIIHPPLVRMLGDSEKYELIAGERRF 61
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA+++A L +PV++R S + A++EN+QR DLNPLE A +QL+ ++ ++Q +
Sbjct: 62 RASQIAGLKSIPVLVRKTSYAQSAQAALIENIQRIDLNPLEIAKALKQLMDDFNFSQERL 121
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMS 218
+GK RS VAN LR+L LP +++ I + IS+GHA+ +++ +
Sbjct: 122 SQQIGKKRSTVANYLRLLTLPMTIQTSIWQGAISMGHAKAILALESEDKQKLLHDLILRD 181
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCI 278
+ E Q +K KK ++ YL L +KI +G + I+ + KG+ I
Sbjct: 182 TLNVREAEQAAARINQKAKKQQLSYVTRDFYLEQLAEKIQQNLGTKVVIQGKGKKGRISI 241
Query: 279 KYETN 283
Y
Sbjct: 242 DYYNL 246
>gi|52843087|ref|YP_096886.1| chromosome partitioning protein ParB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630198|gb|AAU28939.1| chromosome partitioning protein ParB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 289
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 103/291 (35%), Positives = 175/291 (60%), Gaps = 8/291 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGR L+ ++QS S + E Q +++ + P + PR E L
Sbjct: 3 VKRSSLGRNLS---ALLSQSSSSLLANEQPQTEQQLKLAVTCLQPGKYQPRGGMEEAPLN 59
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK G++QPL+VR +DNG Y+IIAGERR+RA+++A L+EVPVI++ VD+++++ +
Sbjct: 60 ELAQSIKKQGVLQPLLVRELDNGKYEIIAGERRWRASQLAGLTEVPVILKQVDDETAMAM 119
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLN +++A +L +E+ T + ++ KSR+ V+N LR+L L + V++
Sbjct: 120 ALVENLQREDLNAMDQARAMYRLTNEFALTHQQVADLLCKSRTAVSNFLRLLSLSTPVKK 179
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ +I +GHAR L + +AQ+I++K +SVR+TE+LV+ N K + K +
Sbjct: 180 LLENGDIDMGHARALLALDEEQQSQVAQLIIAKNLSVRETEQLVERVKNGKPELKTHHKD 239
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++ L L K + +K+ L + + KG I YE + L+ I L
Sbjct: 240 NPMFKEQLNSLAKHLQTKIKLK---QGKTGKGTLVIHYENDHNLQKIIEQL 287
>gi|124516568|gb|EAY58076.1| ParB-like partition protein [Leptospirillum rubarum]
Length = 284
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 26/299 (8%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K LGRGL +L E E I SI NP+ PR F E ++
Sbjct: 1 MAKHGLGRGLDSLF----------ESDGPEKKEEVYLIPCESITVNPYQPRKIFREEEIK 50
Query: 65 DLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
++ QS+ +HG++QP++V ++G Y +I+GERR RAAK+ + +P I R+V +K
Sbjct: 51 EMAQSLLNHGLLQPIVVTRKKGDRESGEYILISGERRLRAAKLLAWEAIPAIERSVTDKD 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A++EN+QR DLNP+E A G+ +LI E+ +TQ + +G RS VAN LRIL L
Sbjct: 111 LLELALIENLQRSDLNPIEIAEGFNRLIEEFHWTQEKLAQNLGMKRSTVANFLRILTLSP 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ I ISLGHA+ L+ DP L EE+VQ++ + ++ ++I
Sbjct: 171 ETIQKIENGVISLGHAKVLLGVKDPKEL----------SSLAEEIVQKKMSVRDLEQRIS 220
Query: 241 EGSREKE--KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+K+ + + ++K+ + +SI K +F E E L + L E+D
Sbjct: 221 NKKEKKDFPAWAEEGKEKLKNYFSRPVSITRTGKKIRFAFVLENEEDLTRLIHQLSESD 279
>gi|262039036|ref|ZP_06012370.1| stage 0 sporulation protein J [Leptotrichia goodfellowii F0264]
gi|261746946|gb|EEY34451.1| stage 0 sporulation protein J [Leptotrichia goodfellowii F0264]
Length = 285
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 109/285 (38%), Positives = 168/285 (58%), Gaps = 24/285 (8%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ I+ I+ NP+ PR YF+ E +E+L +SIK++G+IQP++VR +++G Y+IIAGERR
Sbjct: 2 KLLKLPINKIITNPNQPRKYFDDEKMEELKESIKNNGLIQPIVVRKLESGKYEIIAGERR 61
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
FRA + L + V+ N N S E +++EN+QR++LNP+EEA Y L+ YGYTQ
Sbjct: 62 FRACRELGLESIEVLKINAGNSKSYEFSVLENIQRENLNPVEEAESYIMLMEVYGYTQEK 121
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVS 214
+ +GK+RS ++N RILKLP V+EM++K ++S GHARTL+ +D + A+ I+
Sbjct: 122 LAEKLGKTRSSISNKTRILKLPEKVKEMVKKGDLSYGHARTLLGINDTKEITDLAKKIID 181
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD-------------------LEK 255
KK SVR+ E++V++ K EK+ + E + E L D +E+
Sbjct: 182 KKYSVREVEKIVKKYSEKIEKKSEKKEKNNENVVKLNDKEVTENYDKYDENNDEKVFIEE 241
Query: 256 KISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLLGENDFE 299
K+ +SIK +G+ I + E L I SLL +FE
Sbjct: 242 KLREFFETKVSIKGDLQKQGKIEIDFFDYEDLSRIISLLNI-EFE 285
>gi|254796401|ref|YP_003081237.1| chromosome partitioning protein, ParB family [Neorickettsia
risticii str. Illinois]
gi|254589638|gb|ACT69000.1| chromosome partitioning protein, ParB family [Neorickettsia
risticii str. Illinois]
Length = 256
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 101/260 (38%), Positives = 149/260 (57%), Gaps = 8/260 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E+ + + + N PR F+ + +L +SIK +G+IQP+IVR YK++AGE
Sbjct: 4 NENIVHLKLSEVDVNDFQPRKVFDEASIAELEESIKKNGLIQPIIVRKFGER-YKLVAGE 62
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA + +P I+R +KSSLE+AIVEN+QRKDL PLEEA Y++LI E+ Y
Sbjct: 63 RRLRAMRNLGEETIPSIVREFTDKSSLEVAIVENIQRKDLTPLEEAEAYKRLIDEFNYKH 122
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ IVGKSRSHV N LRIL LP V+E++ + ISLGH + L + D +A+ I
Sbjct: 123 VELAGIVGKSRSHVTNHLRILSLPERVKELLEENRISLGHVKLLTNVKDSEKIAEKIARL 182
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKG 274
+SVR E L+++ K + +K L LEKKIS ++G+ ++I G
Sbjct: 183 SLSVRQVENLLKDARK------KNNPQANKKSHELCMLEKKISERLGMKVTITDSEKENG 236
Query: 275 QFCIKYETNEQLKIICSLLG 294
I ++ ++L+ I L
Sbjct: 237 NVKIIFKNLDELQNILERLS 256
>gi|54295844|ref|YP_122156.1| hypothetical protein plpp0001 [Legionella pneumophila str. Paris]
gi|53755676|emb|CAH17178.1| hypothetical protein plpp0001 [Legionella pneumophila str. Paris]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 98/287 (34%), Positives = 154/287 (53%), Gaps = 7/287 (2%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
+GL L +S + ES +++ + + PR F L++L SIK
Sbjct: 7 KGLKLL----RALDNSFQDGESIPSESITHLAVELLNSGKYQPRQQFNESILDELANSIK 62
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
GIIQPLIVR I Y+IIAGERR+RAAK A L+ VPVIIRN+D+ +L +++EN+Q
Sbjct: 63 VQGIIQPLIVRKITEERYEIIAGERRWRAAKKAGLTYVPVIIRNIDDNVALAFSLIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+EEAL + E+ T DI ++G+SR V N LR+L L S V EM+ + +I
Sbjct: 123 RENLNPIEEALALNRFREEFEMTHEDIAQMIGRSRVSVTNTLRLLSLDSRVIEMLNEGKI 182
Query: 192 SLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
+GHAR+L+ +A ++ K+++VRDTE L + +
Sbjct: 183 DMGHARSLLKLSPEHQYQVACTVIEKQLNVRDTEVLANRLKLSGNNERDKTFSFATRHDK 242
Query: 250 LTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGE 295
+ +S + N+S+K + KG+ I+ + ++ + L+ E
Sbjct: 243 CEEWSTYLSQQFTTNVSVKVNAEGKGKVIIEVNSASEVDWLIKLMSE 289
>gi|270284636|ref|ZP_05966438.2| conserved hypothetical protein [Bifidobacterium gallicum DSM 20093]
gi|270276576|gb|EFA22430.1| conserved hypothetical protein [Bifidobacterium gallicum DSM 20093]
Length = 500
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 86/302 (28%), Positives = 148/302 (49%), Gaps = 32/302 (10%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ D+ + +++ I PN H PR F LE+L +SIK G++QP++VR
Sbjct: 193 NADAAMQLKPVEGGYLVELNVSDIGPNLHQPRITFNDGELEELAKSIKEVGVLQPIVVRK 252
Query: 84 IDNGL----------------------------YKIIAGERRFRAAKMASLSEVPVIIRN 115
Y+++ GERR+RA ++A L+ +P I++
Sbjct: 253 RPAEQIEQARERLAQAETDQKAGDRFADRLDSEYELVMGERRWRATQLAGLTTIPAIVKT 312
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+ L A++EN+ R LNPLEEA Y+Q+I E+G TQ ++ V KSR +AN LR+
Sbjct: 313 TADDYMLRDALLENLHRVALNPLEEAAAYQQMIDEFGLTQLELSKSVSKSRPQIANTLRL 372
Query: 176 LKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
+ LP +V++ + E+S GHAR L + + + LA+ I+ + +SVR EE+V
Sbjct: 373 MNLPGAVQKHVVAGELSAGHARALLGLPNDDEMVKLAERIIKEGLSVRSVEEIVSMAAKT 432
Query: 233 KEKRKKIFEGSREKEKYL-TDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICS 291
+ + + T +++ + + +SIK G+ I + + E+++ I
Sbjct: 433 ADGEGVRKHKTNRNNLWAGTPIQQNLEQRFATKVSIKGSQKHGRIEIVFSSPEEMERIVD 492
Query: 292 LL 293
LL
Sbjct: 493 LL 494
>gi|154508230|ref|ZP_02043872.1| hypothetical protein ACTODO_00724 [Actinomyces odontolyticus ATCC
17982]
gi|153797864|gb|EDN80284.1| hypothetical protein ACTODO_00724 [Actinomyces odontolyticus ATCC
17982]
Length = 280
Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 92/278 (33%), Positives = 154/278 (55%), Gaps = 20/278 (7%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG------- 87
S I+I IVPN PR F+ + L++L SIK G++QP++VR+I
Sbjct: 2 PGASFAEIAIDQIVPNTKQPREVFDEDDLKELSASIKEVGVLQPVVVRSIPAKGRSEKLT 61
Query: 88 ---------LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++I GERR RA+++A + +P IIR ++ L A++EN+ R LNPL
Sbjct: 62 EFLAEKPEARFELIMGERRLRASELAGETTIPAIIRETEDGDLLRDALLENLHRAQLNPL 121
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR- 197
EEA Y+QL++++G TQ ++ + +SR +AN LR+LKLP SV++ + + I+ GHAR
Sbjct: 122 EEASAYQQLMADFGATQEELAKRIARSRPQIANTLRLLKLPPSVQKKVAAQVITAGHARA 181
Query: 198 --TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+L + ++ LA+ IV++ +SVR TEE+V+ K R + + R + +
Sbjct: 182 LLSLSTPAEMERLAERIVAEGLSVRTTEEIVRLGKAKATPRPRARQ-QRPLSQLGESVVS 240
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+S ++I KG+ I++ +E L+ I L+
Sbjct: 241 ALSDAYDTRVTITEGRKKGRIVIEFAGSEDLQRIADLI 278
>gi|307611765|emb|CBX01473.1| hypothetical protein LPW_31611 [Legionella pneumophila 130b]
Length = 289
Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 103/291 (35%), Positives = 175/291 (60%), Gaps = 8/291 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGR L+ ++QS S + E Q +++ + P + PR E L
Sbjct: 3 VKRSSLGRNLS---ALLSQSSSSLLSNEQPQTEKQLKLAVTCLQPGKYQPRGGMEETPLN 59
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK G++QPL+VR IDNG Y+IIAGERR+RA+++A L+EVPVI++ VD+++++ +
Sbjct: 60 ELAQSIKKQGVLQPLLVREIDNGRYEIIAGERRWRASQLAGLTEVPVILKQVDDETAMAM 119
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLN +++A +L +E+ T + ++ KSR+ V+N LR+L L + V++
Sbjct: 120 ALVENLQREDLNAMDQARAMYRLTNEFALTHQQVADLLCKSRTAVSNFLRLLSLSTPVKK 179
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ +I +GHAR L + +AQ+I++K +SVR+TE+LV+ K + K +
Sbjct: 180 LLENGDIDMGHARALLTLDEEQQSQVAQLIIAKNLSVRETEQLVERVKTGKPESKAHQKD 239
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + ++ L L K + +K+ L + + KG I YE + L+ I L
Sbjct: 240 NPQFKEQLNSLAKHLQTKIKLK---QGKTGKGTLIIHYENDHNLQKIIEQL 287
>gi|124268964|ref|YP_001022968.1| chromosome segregation DNA-binding protein [Methylibium
petroleiphilum PM1]
gi|124261739|gb|ABM96733.1| chromosome segregation DNA-binding protein [Methylibium
petroleiphilum PM1]
Length = 303
Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 86/280 (30%), Positives = 155/280 (55%), Gaps = 11/280 (3%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ + + + PR + L +L +SI+S G++QP++VR
Sbjct: 19 PKAQDAPAQPAGDGLPTTLKLSQLQAGKYQPRTRMDEGSLYELAESIRSQGVMQPILVRP 78
Query: 84 IDNG---LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
+ Y+IIAGERR RAAK+A LSEVPV++++V ++S+ +A++EN+QR+DLNPLEE
Sbjct: 79 VGEAALGRYEIIAGERRSRAAKLAGLSEVPVLVKDVSDESAAVMALIENMQREDLNPLEE 138
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART-- 198
A G +L E+G T VG+SRS +N+LR+L L V++M+ ++ +GHAR
Sbjct: 139 AQGLRRLTDEFGLTHEQAAQAVGRSRSAASNLLRLLNLAEPVQQMLMAGDLDMGHARALL 198
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
++ + ++ A I +KK++VRD E+LV ++ ++ G + K + + LE++++
Sbjct: 199 VLERAQQVTAAHEIAAKKLTVRDAEKLVARATA-GGRQTQLLRGQQAKSRDIVRLEEELA 257
Query: 259 SKVGLNISIKHRNNK-----GQFCIKYETNEQLKIICSLL 293
+ + I+ + G+ I + + ++L + L
Sbjct: 258 DVLTAAVEIRVKKRSKRGEQGEVAIAFGSLDELSGLLDKL 297
>gi|54295717|ref|YP_128132.1| hypothetical protein lpl2805 [Legionella pneumophila str. Lens]
gi|53755549|emb|CAH17048.1| hypothetical protein lpl2805 [Legionella pneumophila str. Lens]
Length = 289
Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 102/291 (35%), Positives = 175/291 (60%), Gaps = 8/291 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+ LGR L+ ++QS S + E Q +++ + P + PR E L
Sbjct: 3 VKRSSLGRNLS---ALLSQSSSSLLANEQPQTEQQLKLAVTCLQPGKYQPRGGMEETPLN 59
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L QSIK G++QPL+VR +DNG Y+IIAGERR+RA+++A L+EVPVI++ VD+++++ +
Sbjct: 60 ELAQSIKKQGVLQPLLVRELDNGKYEIIAGERRWRASQLAGLTEVPVILKQVDDETAMAM 119
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QR+DLN +++A +L +E+ T + ++ KSR+ V+N LR+L L + V++
Sbjct: 120 ALVENLQREDLNAMDQARAMYRLTNEFALTHQQVADLLCKSRTAVSNFLRLLSLSTPVKK 179
Query: 185 MIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ +I +GHAR L + +AQ+I++K +SVR+TE+LV+ K + K +
Sbjct: 180 LLENGDIDMGHARALLALDEEHQSQVAQLIIAKNLSVRETEQLVERVKTGKPESKAHQKD 239
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + ++ L L K + +K+ L + + KG I YE + L+ I L
Sbjct: 240 NPQFKEQLNSLAKHLQTKIKLK---QGKTGKGTLIIHYENDYNLQKIIEQL 287
>gi|256398139|ref|YP_003119703.1| parB-like partition protein [Catenulispora acidiphila DSM 44928]
gi|256364365|gb|ACU77862.1| parB-like partition protein [Catenulispora acidiphila DSM 44928]
Length = 398
Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 150/316 (47%), Gaps = 32/316 (10%)
Query: 12 RGLAALIGEVNQSIDS------PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
R +A I + S +S P+ S I I PNP PR F+ L +
Sbjct: 83 RAFSASIPAPSASRESFADESLPDGLMPVPGASFAEIPQGQIRPNPVQPRTEFDEVALAE 142
Query: 66 LCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L SIK G++QP++VR Y++I GERR+RA++ A LS +P IIR+ +
Sbjct: 143 LVASIKEVGLLQPIVVRQLPEPDGEHRYELIMGERRWRASQEAGLSAIPAIIRDTRDDRM 202
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
L A++EN+QR LNPLEEA Y+QL+ ++ T + +GKSR HV N LR+L L
Sbjct: 203 LLDALLENLQRAQLNPLEEAAAYDQLLKDFDCTHEVLAEKIGKSRPHVTNTLRLLTLTPG 262
Query: 182 VREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQE---------- 228
++ + I+ GHAR L S +A+ IV + +SVR EEL
Sbjct: 263 IQRRVAAGVITAGHARALLGLKSVEQQEEIAKRIVRENLSVRAVEELAGMGRWDAAALDT 322
Query: 229 --------QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKY 280
+ +K K S + L D +++S ++ + + +G+ I+Y
Sbjct: 323 ALTETPEDYLDFTDKPKNKRVRSGSRMPILEDFGQRLSDRLETRVKVDIMQKRGRITIEY 382
Query: 281 ETNEQLKIICS-LLGE 295
E LK I +LGE
Sbjct: 383 AGIEDLKRIAKAILGE 398
>gi|288573692|ref|ZP_06392049.1| parB-like partition protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569433|gb|EFC90990.1| parB-like partition protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 282
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 93/294 (31%), Positives = 152/294 (51%), Gaps = 22/294 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ +R LG+GL AL+ + P + + + PNP PR F+
Sbjct: 1 MA---QRRSLGKGLDALLP------------KDVTPSIPKTLPVKELKPNPDQPRKDFDE 45
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
EG+ +L SIK HGI+QPL+V D G Y I+AGERR+RAA+ A + +VPV + + D+ +
Sbjct: 46 EGIRELAASIKVHGILQPLLVTKKDGG-YMIVAGERRWRAAREAGIKDVPVHLFDGDDGA 104
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+++VENVQR+DL+P+E A+ ++L+ + +Q+++ VG SR VAN LR+LKLP+
Sbjct: 105 ILEVSLVENVQREDLSPVEVAMSLKELMDRFSLSQDNLAEKVGWSRPAVANKLRLLKLPT 164
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V +I + +S H R L+S S ++ + EL ++ E+ +
Sbjct: 165 EVLGLISEGALSERHGRALLSLDTIESTIKMGKAAAEKGWTVRELERKIAESTEEIPQEK 224
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
R +S + +S+ R NK + + Q++ I +L
Sbjct: 225 RKKRTPSWG-----DDLSPY-DVGVSMTGRGNKMKLILSGLNKVQIERIGEILS 272
>gi|260904989|ref|ZP_05913311.1| parB-like partition protein [Brevibacterium linens BL2]
Length = 629
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 85/270 (31%), Positives = 146/270 (54%), Gaps = 8/270 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQ-DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E + ++IP+++ I + I NP PR +F+ + L +L SI+ G++QP
Sbjct: 345 ESSSDSGIETPGVDSIPDTEFGEIDVDLIDANPRQPRTFFDEDQLSELVHSIREIGVLQP 404
Query: 79 LIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
++VR D+ +++I GERR RA K A LS +P IIR VD+ L A++EN+ R +LN
Sbjct: 405 VVVRQKPGDSERFELIMGERRLRATKDAGLSAIPAIIRYVDDTDLLRDALLENLHRAELN 464
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
PLEEA Y QL+ ++G TQ ++ +G+SR ++N LR+L+LP V+ + IS GHA
Sbjct: 465 PLEEAAAYGQLLEDFGCTQEELSERIGRSRPQISNTLRLLRLPPLVQRRVAAGVISAGHA 524
Query: 197 RTL---VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
R + LAQ IV++ +SVR +EE V + + + + ++
Sbjct: 525 RAILGLREPEHMEILAQRIVAEGLSVRASEEAVVLLNRGDSMN--VSRATTKVAPQFIEV 582
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETN 283
+++ ++ ++I KG+ +++
Sbjct: 583 AERLGDRLDTKVNITVGKKKGKLSVEFANQ 612
Score = 39.7 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE 29
M+ KR LGRGL ALI + S +
Sbjct: 1 MAER-RKRGLGRGLGALIPDAASSDRPVD 28
>gi|326570505|gb|EGE20545.1| ParB-like chromosome partitioning protein [Moraxella catarrhalis
BC8]
Length = 315
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 76/284 (26%), Positives = 143/284 (50%), Gaps = 17/284 (5%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + + + I+ + + + PR E L +L SIK HG++QP++
Sbjct: 32 AGNNNNPALEAGMGEKVALVQIATNRLQSGKYQPRRDMNEEALNELSLSIKQHGVMQPIV 91
Query: 81 VRA--------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+R D ++IIAGERR+RAAK+A L +P I R + ++ ++ +A++EN+QR
Sbjct: 92 IRPLLSDESKSSDTVTHEIIAGERRWRAAKLAGLETIPAIERVLSDEVAIALALIENIQR 151
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK--EE 190
+DLN LE+A ++ +E+G + I S+VGK+R+ V+N++R+ L V++ + +
Sbjct: 152 EDLNVLEQAAALQRFHTEFGMSHAMIASVVGKARTTVSNLMRLNHLHDQVKQYMIDGVMD 211
Query: 191 ISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
+ A +S +A+ IV M+VRD E LV+ + + + +
Sbjct: 212 MGHARALLSLSQEQQPIIAKKIVDGGMTVRDAERLVKSILD------PNPKLIVQPNHEV 265
Query: 251 TDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
L ++IS +G + +K KG I + +++ + + L
Sbjct: 266 LALSQQISDALGAKVKLKQGKDGKGSVEIFFYDHDEFGELVNRL 309
>gi|229816988|ref|ZP_04447270.1| hypothetical protein BIFANG_02243 [Bifidobacterium angulatum DSM
20098]
gi|229785733|gb|EEP21847.1| hypothetical protein BIFANG_02243 [Bifidobacterium angulatum DSM
20098]
Length = 460
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 92/319 (28%), Positives = 150/319 (47%), Gaps = 37/319 (11%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+ K+ G+ Q + K +++ I PN H PR+ F+
Sbjct: 139 TKKDKKQSDGK---------QQEQSNQSKLKPVEGGYLAELNLDEIGPNAHQPRSIFDEN 189
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGL------------------------YKIIAGERR 97
L +L SIK GI+QP++VR Y++I GERR
Sbjct: 190 DLNELAASIKEVGILQPIVVRRRPADQIAAARKAQAGTKPANRFDGRMDSPYELIMGERR 249
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
+RA+++A L+ +P I++ + L A++EN+ R LNPLEEA Y+Q++ E+G TQ
Sbjct: 250 WRASQLAGLTTIPAIVKTTADDDMLRDALLENLHRVALNPLEEAAAYQQMVDEFGLTQAQ 309
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVS 214
+ V KSR +AN LR+L LP++V++ + +S GHAR L+ + LA I++
Sbjct: 310 LSKSVSKSRPQIANTLRLLNLPATVQKKVAAGILSAGHARALLGLGEPEEMDKLANRIIA 369
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKG 274
+ +SVR TEE+V + K KK + + ++ + + +SIK G
Sbjct: 370 EGLSVRSTEEIVAMANLNSTKPKKPRARRGDPWAN-SPIKSNLEHRFETKVSIKGTPKHG 428
Query: 275 QFCIKYETNEQLKIICSLL 293
I + + E + I LL
Sbjct: 429 HIEIVFSSPEDMDRILDLL 447
>gi|293191004|ref|ZP_06609048.1| sulfite reductase flavoprotein, alpha component [Actinomyces
odontolyticus F0309]
gi|292820691|gb|EFF79657.1| sulfite reductase flavoprotein, alpha component [Actinomyces
odontolyticus F0309]
Length = 280
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 91/278 (32%), Positives = 150/278 (53%), Gaps = 20/278 (7%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR------------ 82
S I+I IVPN PR F+ + L++L SIK G++QP++VR
Sbjct: 2 PGASFAEIAIDQIVPNTKQPREVFDEDDLKELSASIKEVGVLQPVVVRSIPAKGRSEKLT 61
Query: 83 ----AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++I GERR RA+++A + +P IIR ++ L A++EN+ R LNPL
Sbjct: 62 EFLADKPEARFELIMGERRLRASELAGETTIPAIIRETEDGDLLRDALLENLHRAQLNPL 121
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR- 197
EEA Y+QL++++G TQ ++ + +SR +AN LR+LKLP SV++ + + I+ GHAR
Sbjct: 122 EEASAYQQLMADFGATQEELAKRIARSRPQIANTLRLLKLPPSVQKKVAAQVITAGHARA 181
Query: 198 --TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+L + + LA+ IV++ +SVR TEE+V+ K R + + R + +
Sbjct: 182 LLSLSTHEEMERLAERIVAEGLSVRTTEEIVRLGKAKATPRPRARQ-QRPLSQLGESVVS 240
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+S ++I KG+ I++ E L+ I L+
Sbjct: 241 ALSDAYDTRVTITEGRKKGRIVIEFAGCEDLQRIADLI 278
>gi|325678147|ref|ZP_08157777.1| putative stage 0 sporulation protein J [Ruminococcus albus 8]
gi|324110152|gb|EGC04338.1| putative stage 0 sporulation protein J [Ruminococcus albus 8]
Length = 309
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 102/305 (33%), Positives = 178/305 (58%), Gaps = 13/305 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGE-VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ K R+G GL AL E + +S + +S + + + PN PR+ F+
Sbjct: 1 MA---KKNRMGAGLDALFAENTRPAAESETAPEQESGDSVTMVKVTLLEPNKEQPRSTFD 57
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L +L SI+ +G++QP++ R ++NG Y+I+AGERR+RA+++A LSEVPV I+ + +K
Sbjct: 58 DEKLNELADSIRENGVLQPILARPLENGGYQIVAGERRWRASRLAGLSEVPVYIKELSDK 117
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++++A++EN+QR+DL+P+E+A+ Y+ L+ Y TQ + VGKSRS VAN LR+L+L
Sbjct: 118 QTMQMALIENIQRQDLSPVEKAMAYKSLMDSYDMTQQQLAQAVGKSRSAVANSLRLLELD 177
Query: 180 SSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQE-----QDNK 232
SVR+M+ K EIS GHA+ L ++ A+++ + +SVR E+ V+ +
Sbjct: 178 ESVRDMVDKGEISFGHAKVLSGLEKANQAEFAKLVKQEDLSVRQLEDAVRSAEQQAAKQQ 237
Query: 233 KEKRKKIFEGSREKE-KYLTDLEKKISSKVGLNISIKHRNNKG-QFCIKYETNEQLKIIC 290
+ + I + S +KE +L + E +++ + + + N+ G + +K + +
Sbjct: 238 ESDMQTIRKRSVKKERPFLKEFEMAVNANSDVRVKARSDNSGGVKVELKLPKEIDAETLL 297
Query: 291 SLLGE 295
L E
Sbjct: 298 GKLAE 302
>gi|224372367|ref|YP_002606739.1| stage 0 sporulation protein j [Nautilia profundicola AmH]
gi|223588613|gb|ACM92349.1| stage 0 sporulation protein j [Nautilia profundicola AmH]
Length = 277
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 94/278 (33%), Positives = 151/278 (54%), Gaps = 18/278 (6%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLGRGL++++ + E + I + I PNP+ PR F E + +L
Sbjct: 2 KRLGRGLSSILEDAEAGYLK-----ELPSRGVEEIEVSKIKPNPYQPRREFNEEAINELA 56
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SI+ +G++QP+++ D Y ++AGERR RA K+ + I+ + E A++
Sbjct: 57 NSIRKYGLLQPIVLIK-DEDEYILVAGERRLRATKLLGEEYIKAIVVDYSKNDLREYALI 115
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DLNP+E A + LI E+GYT ++ + + KSRS+V N+LRIL LP V E I+
Sbjct: 116 ENIQREDLNPIEVAYSLQSLIEEHGYTHEELANAISKSRSYVTNLLRILNLPEFVHEKIK 175
Query: 188 KEEISLGHARTLVSTSDP--LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ +S+GHA+ L+ D + + I K ++VRDTE+L+Q N K
Sbjct: 176 RGILSVGHAKVLIGLDDELLKKVIEEIEKKSLNVRDTEKLIQRLKN-----PKPEAEDIP 230
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETN 283
+K + ++ K K+GL + I NK IK++ N
Sbjct: 231 IDKRVIEIADKFK-KIGLKVEI----NKDSIKIKFKNN 263
>gi|326571188|gb|EGE21212.1| ParB-like chromosome partitioning protein [Moraxella catarrhalis
BC7]
gi|326573106|gb|EGE23075.1| ParB-like chromosome partitioning protein [Moraxella catarrhalis
CO72]
Length = 314
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 76/281 (27%), Positives = 143/281 (50%), Gaps = 17/281 (6%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ + + + I+ + + + PR E L +L SIK HG++QP+++R
Sbjct: 34 NNNPALEAGMGEKVALVQIATNRLQSGKYQPRRDMNEEALNELSLSIKQHGVMQPIVIRP 93
Query: 84 --------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
D ++IIAGERR+RAAK+A L +P I R + ++ ++ +A++EN+QR+DL
Sbjct: 94 LLSDESKSSDTVTHEIIAGERRWRAAKLAGLETIPAIERVLSDEVAIALALIENIQREDL 153
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK--EEISL 193
N LE+A ++ +E+G + I S+VGK+R+ V+N++R+ L V++ + ++
Sbjct: 154 NVLEQAAALQRFHTEFGMSHAMIASVVGKARTTVSNLMRLNHLHDQVKQYMIDGVMDMGH 213
Query: 194 GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
A +S +A+ IV M+VRD E LV+ + + + + L
Sbjct: 214 ARALLSLSQEQQPIIAKKIVDGGMTVRDAERLVKSILD------PNPKLIVQPNHEVLAL 267
Query: 254 EKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
++IS +G + +K KG I + +++ + + L
Sbjct: 268 SQQISDALGAKVKLKQGKDGKGSVEIFFYDHDEFGELVNRL 308
>gi|327399158|ref|YP_004340027.1| parB-like partition protein [Hippea maritima DSM 10411]
gi|327181787|gb|AEA33968.1| parB-like partition protein [Hippea maritima DSM 10411]
Length = 269
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 102/289 (35%), Positives = 166/289 (57%), Gaps = 23/289 (7%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K LGRG+ A+ G+++ + + + + I +P PR FE E L++
Sbjct: 3 KKTGLGRGIEAIFGDLSVEYE----------DRISVLELDLIEKSPFQPREEFEQEKLKE 52
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L +SIK G+IQP+IVR NG Y+I+AGERRF AAKMA LS +P I+R + ++ + EIA
Sbjct: 53 LAESIKEKGVIQPIIVRE-SNGKYQIVAGERRFLAAKMAGLSSIPAIVRELSDEEAAEIA 111
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QRKDLNP+EEAL Y++L+ +GYTQ ++ +GK R+ +AN LR+LKLP+ V EM
Sbjct: 112 LIENIQRKDLNPIEEALAYKRLMENFGYTQEELSKRIGKDRATIANTLRLLKLPNEVIEM 171
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
++ +IS GHAR A + + E ++++ + +K S++
Sbjct: 172 LKSGQISAGHAR-----------ALLALKDNKEQVKLAEKIKKEKLSVREAEKAAYDSKQ 220
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
E L ++E+K+ + I+ +NNK + ++ ++L +G
Sbjct: 221 IE-QLKEIEEKLKTVTSYPAKIRFKNNKYKVEFVLDSLDKLDEFLRRIG 268
>gi|301630297|ref|XP_002944258.1| PREDICTED: hypothetical protein LOC100490347 [Xenopus (Silurana)
tropicalis]
Length = 527
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 82/278 (29%), Positives = 147/278 (52%), Gaps = 13/278 (4%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----I 84
++ P +++ +VP + PR + L +L +SIK+ GI+QP++VR
Sbjct: 246 AQEMAAPPGLPSTLALDQLVPGIYQPRTRMDEGALYELAESIKAQGIMQPILVRKLTGGA 305
Query: 85 DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
G Y+IIAGERRFRAA++A L VPV++R V ++++ +A++EN+QR+DLNPLEEA G
Sbjct: 306 HAGRYEIIAGERRFRAARLAGLDVVPVLVREVPDEAAAAMALIENIQREDLNPLEEAQGL 365
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSD 204
++L+ E+G T VG+SRS +N+LR+L L V+ M+ ++ +GHAR L++
Sbjct: 366 QRLVREFGLTHEQAAQAVGRSRSAASNLLRLLNLAEPVQTMLMAGDLDMGHARALLALDR 425
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
+ + E + E + + +EK + L +E+++S +
Sbjct: 426 ATQITAGSQIAARKLSVREAESLVKKLGAEFQLLPQKPKKEKSRDLKRVEEELSDLLMAE 485
Query: 265 ISIKHRNN---------KGQFCIKYETNEQLKIICSLL 293
+ ++ + G+ I++ + + L + L
Sbjct: 486 VEVRVKKRVKRGGRSEEMGELAIQFGSLDALNGLIERL 523
>gi|270159230|ref|ZP_06187886.1| stage 0 sporulation protein J [Legionella longbeachae D-4968]
gi|289165944|ref|YP_003456082.1| partition protein ParB [Legionella longbeachae NSW150]
gi|269987569|gb|EEZ93824.1| stage 0 sporulation protein J [Legionella longbeachae D-4968]
gi|288859117|emb|CBJ13046.1| putative partition protein ParB [Legionella longbeachae NSW150]
Length = 263
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 96/256 (37%), Positives = 154/256 (60%), Gaps = 7/256 (2%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
+ I SI + R F + L++L QSI S G+I+PLIVR I Y+IIAGERR+RAA
Sbjct: 8 LPIESIQAGQYQSREDFNTTALQELAQSIASQGLIEPLIVRIIAKNRYEIIAGERRWRAA 67
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
K+A L VP ++ + +K + + ++EN+QR++LN +EEA Y +LI E+ Y Q++I ++
Sbjct: 68 KIAGLQTVPCLVGDYTDKQACALTLIENIQRENLNLIEEASAYRRLIDEFNYQQDEIATL 127
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSV 219
VGKSRSH+ANILR+L L ++ +IR + +SLGHAR LV + LA ++++ SV
Sbjct: 128 VGKSRSHIANILRLLSLSEKIKNLIRDKALSLGHARMLVGLDVAQQEYLAVQTINEQWSV 187
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS-IKHRNNKGQFCI 278
R E V+ Q N + + +K++ + L+ ++ +VG + I ++ G +
Sbjct: 188 RQLEHAVKIQKN----NDRASPKNAKKDRDVERLQSVLAEQVGAPVQIINDNDDGGWLKV 243
Query: 279 KYETNEQLKIICSLLG 294
K+ N+ L + LG
Sbjct: 244 KFYDNDTLAGLLERLG 259
>gi|257067210|ref|YP_003153466.1| parB-like partition protein [Anaerococcus prevotii DSM 20548]
gi|256799090|gb|ACV29745.1| parB-like partition protein [Anaerococcus prevotii DSM 20548]
Length = 280
Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 100/291 (34%), Positives = 158/291 (54%), Gaps = 15/291 (5%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
++ LGRGL+ALI E+ + I S EK I I I PR F E +E+L
Sbjct: 4 RKTLGRGLSALIPEIEEDIRSIEK-----------IDIDLIQARSDQPRKNF--ENIEEL 50
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
+SIK +G++ IV + N Y+IIAGERR+RA+ +A L ++ I+R+ D K +++
Sbjct: 51 AESIKEYGLL-NPIVLSKKNDKYEIIAGERRYRASVLAGLKKIDAIVRDFDQKEIDILSL 109
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
VEN+QR+DL+ LEEA Y++LI ++ TQ +I +GKSRS++AN +R+LKL + RE +
Sbjct: 110 VENIQREDLSALEEAQAYKKLIDDFSMTQEEISKSMGKSRSYIANTIRLLKLNNDEREAL 169
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+IS ARTL+S D + + + + ++ NK + +++ S
Sbjct: 170 ADRKISASQARTLLSIKDEEERKKALDGFINKKLNVRD-AEKISNKSKGKREPEGLSDID 228
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ L D E+K KVG + I + I T + ++ I LG+ D
Sbjct: 229 KILLEDYEEKFMEKVGSKVKIDKTGKTYKLIIDCFTVDDIENIYWRLGDED 279
>gi|319945983|ref|ZP_08020232.1| ParB/SpoJ family partitioning protein [Streptococcus australis ATCC
700641]
gi|319747791|gb|EFW00036.1| ParB/SpoJ family partitioning protein [Streptococcus australis ATCC
700641]
Length = 253
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 95/259 (36%), Positives = 146/259 (56%), Gaps = 8/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E D I + I NP PR F E LE+L SIK +G+IQP+IVR Y+++AGER
Sbjct: 2 EKIDIIDVKQIRTNPFQPRQTFVQEKLEELAASIKVNGLIQPIIVRKSPIVGYELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RAA+MA E+P IIR + + ++ AI+EN+QR+DLNP+EEA Y+ LI++ T
Sbjct: 62 RYRAAQMAGFKEIPAIIRELSDDDMIKQAIIENLQREDLNPIEEAESYQHLINKGA-THE 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR +++N++R+L L +V+E I+ E+IS GHAR LV + L + + K
Sbjct: 121 EIAQFMGKSRPYISNMVRLLHLSPAVKEAIKNEQISQGHARILVPLKEDLQIYWLEQILK 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQ 275
L +K +KK +EKE +L E ++ +G + I + KG
Sbjct: 181 EG------LSVRSLEEKVGQKKKRPSKKEKELFLAQEENRLKKILGTEVEIHLTKQEKGS 234
Query: 276 FCIKYETNEQLKIICSLLG 294
I + ++ + I + L
Sbjct: 235 IHISFNNLDEYQRIINSLK 253
>gi|209363641|ref|YP_001423434.2| chromosome partitioning protein [Coxiella burnetii Dugway
5J108-111]
gi|207081574|gb|ABS78585.2| chromosome partitioning protein [Coxiella burnetii Dugway
5J108-111]
Length = 315
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 166/302 (54%), Gaps = 16/302 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ K L +GL L +S+ S K + + ++ +SI + + PR +
Sbjct: 27 MADIELK-GL-KGLRDL-----KSLASASKTNDFVAQNLYFLSIDLLQTGKYQPRKGWIK 79
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIKS GIIQPLIVR I Y+IIAGERR+RAAK A L +VP IIRNVD+ +
Sbjct: 80 ESLQELVNSIKSQGIIQPLIVRQIQTNRYEIIAGERRWRAAKEAGLKKVPAIIRNVDDTT 139
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L A++EN+QR++LNP++EAL + +L E+ + I VG+SR+ V NILR+L L
Sbjct: 140 ALAFALIENIQRENLNPIDEALAFSRLRDEFSMSHAAISETVGRSRTAVTNILRLLSLDD 199
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
SV+ +++ +++ +GHAR L++ AQ I+ K ++VR+ E+LVQ
Sbjct: 200 SVKVLLQTDKLEMGHARALLTLPKDQQILFAQKIIDKNLTVREAEKLVQFAKT------P 253
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ ++S + I+I + +G+ I + + E++ + +
Sbjct: 254 KETKPAPYADEVQGWVNQLSRSLSSKIAININEKGEGKVIIHFTSPEEVDWLVEHFTDKA 313
Query: 298 FE 299
E
Sbjct: 314 EE 315
>gi|229816217|ref|ZP_04446527.1| hypothetical protein COLINT_03267 [Collinsella intestinalis DSM
13280]
gi|229808225|gb|EEP44017.1| hypothetical protein COLINT_03267 [Collinsella intestinalis DSM
13280]
Length = 270
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 88/271 (32%), Positives = 151/271 (55%), Gaps = 4/271 (1%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+ ++ +SI I PNP+ PR +F LE+L +SI+ +G++QPL+VR +
Sbjct: 3 EAQSETGYAATETQMSIEEIFPNPNQPRTHFNESELEELSESIRENGVLQPLLVRKNGSK 62
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y+IIAGERR++A+K+A L +VPVI+++VD++ LEIA++EN+QR DLNP+EEA GY QL
Sbjct: 63 -YEIIAGERRYQASKIAGLDKVPVIVKDVDDQKMLEIALIENLQRSDLNPIEEAKGYRQL 121
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I G TQ + V KSRS + N LR+L LP +V++M+ + +++ GHAR +++
Sbjct: 122 IKASGMTQEALSKAVSKSRSAITNSLRLLDLPEAVQQMMYEGKLTAGHARAILAVP--FE 179
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY-LTDLEKKISSKVGLNIS 266
A++ +++K+ E R + + N+
Sbjct: 180 EARIKLAEKVVAEGLSVRATENLAPLFSVGDTPRAPRPVTPQSYKKAARVLRQVFNTNVK 239
Query: 267 IKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
++ K + I++ + L+ I + + E++
Sbjct: 240 VRATRGKNKIEIEFRDEDDLQRILASMVESE 270
>gi|326564019|gb|EGE14264.1| ParB-like chromosome partitioning protein [Moraxella catarrhalis
103P14B1]
Length = 330
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 75/281 (26%), Positives = 142/281 (50%), Gaps = 17/281 (6%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ + + + I+ + + + PR L +L SIK HG++QP+++R
Sbjct: 50 NNNPALEAGMGEKVALVQIATNRLQSGKYQPRRDMNEAALNELSLSIKQHGVMQPIVIRP 109
Query: 84 --------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
D ++IIAGERR+RAAK+A L +P I R + ++ ++ +A++EN+QR+DL
Sbjct: 110 LLSDESKSSDTVTHEIIAGERRWRAAKLAGLETIPAIERVLSDEVAIALALIENIQREDL 169
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK--EEISL 193
N LE+A ++ +E+G + I S+VGK+R+ V+N++R+ L V++ + ++
Sbjct: 170 NVLEQAAALQRFHTEFGMSHAMIASVVGKARTTVSNLMRLNHLHDQVKQYMIDGVMDMGH 229
Query: 194 GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
A +S +A+ IV M+VRD E LV+ + + + + L
Sbjct: 230 ARALLSLSQEQQPIIAKKIVDGGMTVRDAERLVKSILD------PNPKLIVQPNHEVLAL 283
Query: 254 EKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
++IS +G + +K KG I + +++ + + L
Sbjct: 284 SQQISDALGAKVKLKQGKDGKGSVEIFFYDHDEFGELVNRL 324
>gi|34580954|ref|ZP_00142434.1| stage 0 sporulation protein J [Rickettsia sibirica 246]
gi|28262339|gb|EAA25843.1| stage 0 sporulation protein J [Rickettsia sibirica 246]
Length = 286
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 96/305 (31%), Positives = 158/305 (51%), Gaps = 56/305 (18%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGL++L+GE SI+S E I+I I PN + PR FE
Sbjct: 1 MAKN---KGLGRGLSSLLGEEVISIES---------EIVQIINIDKIRPNENQPRKNFEY 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD--- 117
+ +++L SI ++G++QP+IV + ++IIAGERR+RA K+A + E+PVII+N+D
Sbjct: 49 DKIKELADSILNNGLLQPIIV----DNNFQIIAGERRWRACKLAKVLEIPVIIKNLDARE 104
Query: 118 -------------NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+ + +EEA G++ LI + YT + +GK
Sbjct: 105 SMEIALIENIQRTDLTV----------------MEEARGFKYLIENFNYTAEKLAERLGK 148
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
SRSH+AN+LR+ LP S+++ + + +S+G AR LV+ +A I++ ++VR TEE
Sbjct: 149 SRSHIANLLRLNNLPQSIQDKVNENILSMGQARCLVNHEHAEVIADYIINNDLNVRQTEE 208
Query: 225 LVQEQDNKKEKRKKIFEGSREK--------EKYLTDLEKKISSKVGLNISIKHRNNKGQF 276
LV++ + + K + L L K +S K G+ I+I++ G+
Sbjct: 209 LVRQWYKNEYTKSPNNNNKIGKRFLKDNATDNDLELLVKALSEKFGIKITIENYPLGGKL 268
Query: 277 CIKYE 281
Y+
Sbjct: 269 IFHYK 273
>gi|237751989|ref|ZP_04582469.1| sporulation protein [Helicobacter winghamensis ATCC BAA-430]
gi|229376556|gb|EEO26647.1| sporulation protein [Helicobacter winghamensis ATCC BAA-430]
Length = 296
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 94/299 (31%), Positives = 160/299 (53%), Gaps = 15/299 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K+ LGRGL A++ EV ++ + + + I I PNP PR FE+ L+
Sbjct: 1 MAKKGLGRGLGAILSEVEEAY---QNDLQDNSGLVVELDIDKIKPNPLQPRKVFEAASLQ 57
Query: 65 DLCQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
+L SI+ HG++QP++V D Y +IAGERR RA+K+A + II +V
Sbjct: 58 ELATSIEEHGLLQPILVYEDSKDTDFYYLIAGERRLRASKLAKKESIKAIIVDVQMDKLR 117
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E+A++EN+QR+DLNP++ A Y++LI +YG T ++ + KSR+ + N LR+L L V
Sbjct: 118 ELALIENIQREDLNPIDLARSYKELIDDYGITHEEMAKRLSKSRTQITNTLRLLDLSKEV 177
Query: 183 REMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
++++ + +IS GHA+ LV+ A IV +K+SV TE++V+ K K
Sbjct: 178 QDLVLENKISQGHAKILVTLPKEQQNLIANSIVGQKLSVHATEKIVKNCKETKILNKIPN 237
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNN------KGQFCIKYETNEQLKIICSLL 293
+ +++ DL K + + + N K + +++ +E++K +L
Sbjct: 238 FKNSLQKQ--KDLNKDSIAALKTACAELKSNGIMAFVQKNRLIVEFSNDEEVKKFSKIL 294
>gi|229586299|ref|YP_002844800.1| ParB-like partition protein [Rickettsia africae ESF-5]
gi|228021349|gb|ACP53057.1| ParB-like partition protein [Rickettsia africae ESF-5]
Length = 286
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 95/305 (31%), Positives = 158/305 (51%), Gaps = 56/305 (18%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGL++L+GE SI+S E I+I I PN + PR FE
Sbjct: 1 MAKN---KGLGRGLSSLLGEEVISIES---------EIVQIINIDKIRPNENQPRKNFEY 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD--- 117
+ +++L SI ++G++QP+IV + ++IIAGERR+RA K+A + E+PVII+N+D
Sbjct: 49 DKIKELADSILNNGLLQPIIV----DNNFQIIAGERRWRACKLAKVLEIPVIIKNLDPRE 104
Query: 118 -------------NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+ + +EEA G++ LI + YT + +GK
Sbjct: 105 SMEIALIENIQRTDLTV----------------MEEARGFKYLIENFNYTAEKLAERLGK 148
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
SRSH+AN+LR+ LP S+++ + + +S+G AR L++ +A I++ ++VR TEE
Sbjct: 149 SRSHIANLLRLNNLPQSIQDKVNENILSMGQARCLINHEHAEVIADYIINNDLNVRQTEE 208
Query: 225 LVQEQDNKKEKRKKIFEGSREK--------EKYLTDLEKKISSKVGLNISIKHRNNKGQF 276
LV++ + + K + L L K +S K G+ I+I++ G+
Sbjct: 209 LVRQWYKNEYTKSPNNNNKIGKRFLKDNATDNDLELLVKALSEKFGIKITIENYPLGGKL 268
Query: 277 CIKYE 281
Y+
Sbjct: 269 IFHYK 273
>gi|15892010|ref|NP_359724.1| stage 0 sporulation protein J [Rickettsia conorii str. Malish 7]
gi|81595602|sp|Q92JI0|PARB_RICCN RecName: Full=Probable chromosome-partitioning protein parB
gi|15619125|gb|AAL02625.1| stage 0 sporulation protein J [Rickettsia conorii str. Malish 7]
Length = 286
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 95/305 (31%), Positives = 158/305 (51%), Gaps = 56/305 (18%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGL++L+GE SI+S E I+I I PN + PR FE
Sbjct: 1 MAKN---KGLGRGLSSLLGEEVISIES---------EIVQIINIDKIRPNENQPRKNFEY 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD--- 117
+ +++L SI ++G++QP+IV + ++IIAGERR+RA K+A + E+PVII+N+D
Sbjct: 49 DKIKELADSILNNGLLQPIIV----DNNFQIIAGERRWRACKLAKVLEIPVIIKNLDARE 104
Query: 118 -------------NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+ + +EEA G++ LI + YT + +GK
Sbjct: 105 SMEIALIENIQRTDLTV----------------MEEARGFKYLIENFNYTAEKLAERLGK 148
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
SRSH+AN+LR+ LP S+++ + + +S+G AR L++ +A I++ ++VR TEE
Sbjct: 149 SRSHIANLLRLNNLPQSIQDKVNENILSMGQARCLINHEHAEVIADYIINNDLNVRQTEE 208
Query: 225 LVQEQDNKKEKRKKIFEGSREK--------EKYLTDLEKKISSKVGLNISIKHRNNKGQF 276
LV++ + + K + L L K +S K G+ I+I++ G+
Sbjct: 209 LVRQWYKNEYTKSPNNNNKIGKRFLKDNATDNDLELLVKALSEKFGIKITIENYPLGGKL 268
Query: 277 CIKYE 281
Y+
Sbjct: 269 IFHYK 273
>gi|224418189|ref|ZP_03656195.1| stage 0 sporulation protein J [Helicobacter canadensis MIT 98-5491]
gi|253827516|ref|ZP_04870401.1| putative regulator [Helicobacter canadensis MIT 98-5491]
gi|313141724|ref|ZP_07803917.1| stage 0 sporulation protein j [Helicobacter canadensis MIT 98-5491]
gi|253510922|gb|EES89581.1| putative regulator [Helicobacter canadensis MIT 98-5491]
gi|313130755|gb|EFR48372.1| stage 0 sporulation protein j [Helicobacter canadensis MIT 98-5491]
Length = 297
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 94/304 (30%), Positives = 159/304 (52%), Gaps = 13/304 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + LGRGL+A++GEV ++ + I I NP PR F+
Sbjct: 1 MAKSA---GLGRGLSAILGEVEEAY---QNNLNDNSGLVVEIEADKIKANPLQPRKVFDD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E L++L SI+ +G++QP++V + Y +IAGERR RA+K+A + II +V
Sbjct: 55 ESLQELADSIQEYGLLQPILVYEDSKKSDEYFLIAGERRLRASKIAKKETIKAIIVDVQE 114
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
E+A++EN+QR+DLNP++ A Y +LI +YG T ++ + KSR+ + N LR+L L
Sbjct: 115 TKLRELALIENIQREDLNPIDLAQSYRELIEDYGITHEEVAKRLSKSRAQITNTLRLLDL 174
Query: 179 PSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQD--NKKE 234
+ V++ I + +IS GHA+ LV L +A IV +K+SV +TE +V+ +
Sbjct: 175 ENEVQKYIIENKISQGHAKILVTLPKEKQLMVADSIVGQKLSVHETEAIVRNIKGAKPMD 234
Query: 235 KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+K+ + + KI + N +K K F +++ +E+++ +L
Sbjct: 235 ASRKVSLNKKTISPQSQNELMKICQMMQGN-KLKANLRKNCFIVEFSNDEEVERFIKILP 293
Query: 295 ENDF 298
F
Sbjct: 294 NPSF 297
>gi|32265922|ref|NP_859954.1| transcriptional regulator involved in chromosome partitioning ParB
[Helicobacter hepaticus ATCC 51449]
gi|32261971|gb|AAP77020.1| transcriptional regulator involved in chromosome partitioning ParB
[Helicobacter hepaticus ATCC 51449]
Length = 290
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 92/299 (30%), Positives = 168/299 (56%), Gaps = 13/299 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ K +GRGL A++ E ++ + ++ + + I PNP+ PR F
Sbjct: 1 MAK--KKLAMGRGLGAILSETAEAYEQNLSDNSSL---VLELDVDIIKPNPYQPRKTFNP 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ L++L +SIK HG++QP+IV +G Y +IAGERR RA+K+A L + I+ +D K
Sbjct: 56 QALQELSESIKEHGLLQPVIVYDNGDGDYVLIAGERRLRASKLAGLDNIKAIVAEIDFKH 115
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+AI+EN+QR+DL +E AL Y++L+ EY T ++ + KSR+ + N LR+L+L
Sbjct: 116 MRELAIIENIQREDLGAIELALSYQELLEEYDMTHEELSKRINKSRAQITNTLRLLQLSD 175
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++++ + +I+ GHA+ LV+ + A I+ +K++VRDTE L+++ +KKE K
Sbjct: 176 EIKDLLNENKITQGHAKMLVTLDNREQKLVADSIIGQKLNVRDTETLIKKIKDKKETLSK 235
Query: 239 IF--EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ +K L + I +G+ I + I ++ + ++ + + +
Sbjct: 236 KNILKHTQTLDKELLYALQSIFKDMGIQSHISAS----KMSIIFQNDAEITTLIKKMSK 290
>gi|238650526|ref|YP_002916378.1| stage 0 sporulation protein J [Rickettsia peacockii str. Rustic]
gi|238624624|gb|ACR47330.1| stage 0 sporulation protein J [Rickettsia peacockii str. Rustic]
Length = 286
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 94/305 (30%), Positives = 157/305 (51%), Gaps = 56/305 (18%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGL++L+GE SI+S E I+I I PN + PR FE
Sbjct: 1 MAKN---KGLGRGLSSLLGEEVISIES---------EIVQIINIDKIRPNENQPRKNFEY 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD--- 117
+ +++L SI ++G++QP+I+ + ++IIAGERR+RA K+A + E+PVII+N+D
Sbjct: 49 DKIKELADSILNNGLLQPIII----DNNFQIIAGERRWRACKLAKVLEIPVIIKNLDARE 104
Query: 118 -------------NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+ + +EEA G++ LI + YT + +GK
Sbjct: 105 SMEIALIENIQRTDLTV----------------MEEARGFKYLIENFNYTVEKLAERLGK 148
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
SRSH+AN+LR+ LP S+++ + + +S+G AR L++ +A I++ ++VR TEE
Sbjct: 149 SRSHIANLLRLNNLPQSIQDKVNENILSMGQARCLINHEHAEVIADYIINNDLNVRQTEE 208
Query: 225 LVQEQDNKKEKRKKIFEGSREK--------EKYLTDLEKKISSKVGLNISIKHRNNKGQF 276
LV+ + + K + L L K +S K G+ I+I++ G+
Sbjct: 209 LVRRWYKNEYTKSPNNNNKIGKRFLKDNATDNDLELLVKALSEKFGIKITIENYPLGGKL 268
Query: 277 CIKYE 281
Y+
Sbjct: 269 IFHYK 273
>gi|315222845|ref|ZP_07864730.1| ParB-like partition protein [Streptococcus anginosus F0211]
gi|315188081|gb|EFU21811.1| ParB-like partition protein [Streptococcus anginosus F0211]
Length = 255
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 85/257 (33%), Positives = 145/257 (56%), Gaps = 8/257 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E I++ I NP+ PR F E + +L SIK HGIIQP+IVR Y+++AGER
Sbjct: 2 EKYQYIALKDIQTNPYQPRKEFSEEKITELANSIKEHGIIQPIIVRKSPIIGYELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAAK+A L+ +P II+ V + ++ AI+EN+QR+DLNP+EEA Y+ LI + +
Sbjct: 62 RFRAAKLAGLTNIPAIIKEVTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKE 121
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ +GKSR ++ N +R+L LPS++ E +++ IS GHAR L++ S+ +
Sbjct: 122 IALT-MGKSRPYITNSVRLLNLPSNIIEAVKEGNISQGHARLLINLSEKDQIHWF----- 175
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN--NKG 274
+ E V++ + + ++ + + ++ + E+++ G +IS++ G
Sbjct: 176 EKILSQELSVRKLEKQLHPKRTKTVTKDKNQLFIKEEEERLKKIFGTDISLQFSKQSQSG 235
Query: 275 QFCIKYETNEQLKIICS 291
+ CI + E+ + I
Sbjct: 236 KICIHFSNLEEYQRIID 252
>gi|212208442|ref|YP_002302599.1| chromosome partitioning protein [Coxiella burnetii CbuK_Q154]
gi|212013893|gb|ACJ21272.1| chromosome partitioning protein [Coxiella burnetii CbuK_Q154]
Length = 315
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 101/302 (33%), Positives = 166/302 (54%), Gaps = 16/302 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ K L +GL L +S+ + K + + ++ +SI + + PR +
Sbjct: 27 MADIELK-GL-KGLRDL-----KSLANASKTNDFVAQNLYFLSIDLLQTGKYQPRKGWIK 79
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIKS GIIQPLIVR I Y+IIAGERR+RAAK A L +VP IIRNVD+ +
Sbjct: 80 ESLQELVNSIKSQGIIQPLIVRQIQTNRYEIIAGERRWRAAKEAGLKKVPAIIRNVDDTT 139
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L A++EN+QR++LNP++EAL + +L E+ + I VG+SR+ V NILR+L L
Sbjct: 140 ALAFALIENIQRENLNPIDEALAFSRLRDEFSMSHAAISETVGRSRTAVTNILRLLSLDD 199
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
SV+ +++ +++ +GHAR L++ AQ I+ K ++VR+ E+LVQ
Sbjct: 200 SVKVLLQTDKLEMGHARALLTLPKDQQILFAQKIIDKNLTVREAEKLVQFAKT------P 253
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ ++S + I+I + +G+ I + + E++ + +
Sbjct: 254 KETKPAPYADEVQGWVNQLSRSLSSKIAININEKGEGKVIIHFTSPEEVDWLVEHFTDKA 313
Query: 298 FE 299
E
Sbjct: 314 EE 315
>gi|10956023|ref|NP_052845.1| hypothetical protein QpDV_p04 [Coxiella burnetii]
gi|29648146|ref|NP_819051.1| parB protein, putative [Coxiella burnetii RSA 493]
gi|161789072|ref|YP_001595808.1| ParB-like partition domain-containing protein [Coxiella burnetii
RSA 331]
gi|165905643|ref|YP_001649314.1| ParB-like partition domain-containing protein [Coxiella burnetii
'MSU Goat Q177']
gi|4928233|gb|AAD33477.1|AF131076_3 hypothetical protein [Coxiella burnetii]
gi|120575898|gb|EAX32522.1| ParB-like partition domain protein [Coxiella burnetii 'MSU Goat
Q177']
gi|161761533|gb|ABX77176.1| ParB-like partition domain protein [Coxiella burnetii RSA 331]
Length = 289
Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 99/295 (33%), Positives = 163/295 (55%), Gaps = 15/295 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ L +GL L +S+ + K + + ++ +SI + + PR + E L++L
Sbjct: 7 KGL-KGLRDL-----KSLANASKTNDFVAQNLYFLSIDLLQTGKYQPRKGWIKESLQELV 60
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIKS GIIQPLIVR I Y+IIAGERR+RAAK A L +VP IIRNVD+ ++L A++
Sbjct: 61 NSIKSQGIIQPLIVRQIQTNRYEIIAGERRWRAAKEAGLKKVPAIIRNVDDTTALAFALI 120
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR++LNP++EAL + +L E+ + I VG+SR+ V NILR+L L SV+ +++
Sbjct: 121 ENIQRENLNPIDEALAFSRLRDEFSMSHAAISETVGRSRTAVTNILRLLSLDDSVKVLLQ 180
Query: 188 KEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+++ +GHAR L++ AQ I+ K ++VR+ E+LVQ
Sbjct: 181 TDKLEMGHARALLTLPKDQQILFAQKIIDKNLTVREAEKLVQFAKT------PKETKPAP 234
Query: 246 KEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
+ ++S + I+I + +G+ I + + E++ + + E
Sbjct: 235 YADEVQGWVNQLSRSLSSKIAININEKGEGKVIIHFTSPEEVDWLVEHFTDKAEE 289
>gi|206895211|ref|YP_002247442.1| stage 0 sporulation protein J [Coprothermobacter proteolyticus DSM
5265]
gi|206737828|gb|ACI16906.1| stage 0 sporulation protein J [Coprothermobacter proteolyticus DSM
5265]
Length = 279
Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 87/291 (29%), Positives = 156/291 (53%), Gaps = 17/291 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
SK +LG+GL AL+G+ + E + I +P PR+ + + ++
Sbjct: 1 MSKNKLGKGLNALLGD------------NLLGEEILQLDPSLITTSPFQPRSAVDDDDID 48
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
DL +S+K G++QP++VR + Y++IAGERR+RAA A L +VPVI++NV ++ ++ +
Sbjct: 49 DLAESLKKTGVLQPILVRGSGDK-YELIAGERRWRAAIKAGLEKVPVIVKNVADEQAMIM 107
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A+VEN+QRKDLNP+E A +Q+I G TQ ++ ++G SRS+ N+LR+L LP V+
Sbjct: 108 ALVENLQRKDLNPIEVARACKQIIDSTGMTQEELAEVLGMSRSNFTNLLRLLDLPEEVQT 167
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+I+K +I++GHA+ L+S D + V V+E + + KK
Sbjct: 168 LIQKGDITVGHAKVLLSLKDG----DETLKLAKVVAQRNLSVRELEQLCKTSKKDNTSKN 223
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ ++ L++ + + + + + I + ++ + L +
Sbjct: 224 SMDPHVKKLKQVFAEIKSIPVKVSKNKSGYSVTISFSNPDKAVQLAEYLKQ 274
>gi|10955987|ref|NP_052337.1| hypothetical protein QpH1_p05 [Coxiella burnetii]
gi|407375|emb|CAA53107.1| unnamed protein product [Coxiella burnetii]
gi|1163135|gb|AAA85481.1| plasmid replication-partition related protein [Coxiella burnetii]
gi|2706526|emb|CAA75820.1| hypothetical protein [Coxiella burnetii]
gi|206582183|gb|AAO91611.2| chromosome partitioning protein [Coxiella burnetii RSA 493]
Length = 307
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 99/295 (33%), Positives = 163/295 (55%), Gaps = 15/295 (5%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ L +GL L +S+ + K + + ++ +SI + + PR + E L++L
Sbjct: 25 KGL-KGLRDL-----KSLANASKTNDFVAQNLYFLSIDLLQTGKYQPRKGWIKESLQELV 78
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIKS GIIQPLIVR I Y+IIAGERR+RAAK A L +VP IIRNVD+ ++L A++
Sbjct: 79 NSIKSQGIIQPLIVRQIQTNRYEIIAGERRWRAAKEAGLKKVPAIIRNVDDTTALAFALI 138
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR++LNP++EAL + +L E+ + I VG+SR+ V NILR+L L SV+ +++
Sbjct: 139 ENIQRENLNPIDEALAFSRLRDEFSMSHAAISETVGRSRTAVTNILRLLSLDDSVKVLLQ 198
Query: 188 KEEISLGHARTLVSTSDPLS--LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+++ +GHAR L++ AQ I+ K ++VR+ E+LVQ
Sbjct: 199 TDKLEMGHARALLTLPKDQQILFAQKIIDKNLTVREAEKLVQFAKT------PKETKPAP 252
Query: 246 KEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
+ ++S + I+I + +G+ I + + E++ + + E
Sbjct: 253 YADEVQGWVNQLSRSLSSKIAININEKGEGKVIIHFTSPEEVDWLVEHFTDKAEE 307
>gi|157964125|ref|YP_001498949.1| ParB-like partition protein [Rickettsia massiliae MTU5]
gi|157843901|gb|ABV84402.1| ParB-like partition protein [Rickettsia massiliae MTU5]
Length = 287
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 57/306 (18%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGL++L+GE SI+S E I+I I PN + PR FE
Sbjct: 1 MAKN---KGLGRGLSSLLGEEVISIES---------EVVQIINIDKIRPNENQPRKNFEY 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD--- 117
+ +++L SI ++G++QP+IV + ++IIAGERR+RA K+A + E+PVII+N+D
Sbjct: 49 DKIKELADSILNNGLLQPIIV----DNNFQIIAGERRWRACKLAKVLEIPVIIKNLDARE 104
Query: 118 -------------NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+ + +EEA G++ LI + YT + +GK
Sbjct: 105 SMEIALIENIQRTDLTV----------------MEEARGFKYLIENFNYTAEKLAERLGK 148
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
SRSH+AN+LR+ LP S+++ + + +S+G AR L++ +A I++ ++VR TEE
Sbjct: 149 SRSHIANLLRLNNLPQSIQDKVNENILSMGQARCLINHEHAEVIADHIINNDLNVRQTEE 208
Query: 225 LVQEQDNKKEKRKKIFEGSR---------EKEKYLTDLEKKISSKVGLNISIKHRNNKGQ 275
LV++ K E K ++ + L L K +S K G+ I+I++ G+
Sbjct: 209 LVRQWYKKNEYTKSPNNNNKIGKRFLKDNATDNDLELLVKALSEKFGIKITIENYPLGGK 268
Query: 276 FCIKYE 281
Y+
Sbjct: 269 LIFHYK 274
>gi|237751121|ref|ZP_04581601.1| transcriptional regulator [Helicobacter bilis ATCC 43879]
gi|229373566|gb|EEO23957.1| transcriptional regulator [Helicobacter bilis ATCC 43879]
Length = 285
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 96/292 (32%), Positives = 160/292 (54%), Gaps = 11/292 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+KR LG GL L G++N EK + I IVPNP PR F E L
Sbjct: 1 MAKRALGSGLNNLFGDINAVY---EKNYVDSDTNMQMIKCDDIVPNPMQPRKIFNDESLR 57
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L SI+ HG++QP++VR +NG Y +IAGERR RA K+ + I+ + ++ E+
Sbjct: 58 ELADSIEEHGLLQPIVVRENENGGYILIAGERRLRATKLLQKEHIQAIVISTEDYKMREL 117
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
A++ENVQR+DLNP++ AL Y+ L+ EY TQ + + KSR+ + N LR+L+L RE
Sbjct: 118 ALIENVQREDLNPIDLALCYQALLKEYDLTQEKLAQKIHKSRTQITNTLRLLELSDKTRE 177
Query: 185 MIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+++ +I+ GHA+ L+ + +D Q I+ +K++VR+TE L + +K + + +
Sbjct: 178 LLQDGKITQGHAKMLIGLTPNDEEMALQSILGQKLNVRETENLAKNLKSKAKMLENNKDS 237
Query: 243 SREKEKY-LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ L +L++ + + +I+ K ++ + N +L I+ L
Sbjct: 238 TESLYAESLQNLQEILKTY-----NIESTIKKNSIILQCDENSKLDIVLQKL 284
>gi|319956197|ref|YP_004167460.1| parb-like partition protein [Nitratifractor salsuginis DSM 16511]
gi|319418601|gb|ADV45711.1| parB-like partition protein [Nitratifractor salsuginis DSM 16511]
Length = 292
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 84/294 (28%), Positives = 148/294 (50%), Gaps = 11/294 (3%)
Query: 9 RLGRGLAALIGEVNQSIDSP----EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
LG+GL A++ EV Q+ +S + + E + ++ + + +I PNP+ PR F+ E L
Sbjct: 2 ALGKGLGAILEEVGQAYESELSEEKIREEDLGDAVRELPVEAIEPNPYQPRKSFDPERLN 61
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +SI+ HG++QP++V G ++AGERR RA K+ ++ II +VD
Sbjct: 62 ELAESIRRHGLLQPVVVIPNGEGWI-LVAGERRLRAHKIIGAEKIRAIIADVDLDRLRMR 120
Query: 125 A--IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
+VEN+QR++LNP+E A Y +L+ +G T ++ SIV KSRS + N LR+L L
Sbjct: 121 ELALVENIQRENLNPVELAEAYRELLEVHGITHEELASIVHKSRSQITNTLRLLSLSDYA 180
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
++ + + +S GHA+ L+S + V + E + N+ K +K
Sbjct: 181 KKQLVEGRLSQGHAKILLSLPEEKQRIVVDTILGRKLSVRETEELVKSNRDRKTEKKSRK 240
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ K +LE +++ + + I + L+ + LL ++
Sbjct: 241 REQIGKRDPELEARLARLLPFPHRFTPKG----IEIDLPDDAALEALIDLLEKS 290
>gi|157827961|ref|YP_001494203.1| stage 0 sporulation protein J [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932649|ref|YP_001649438.1| chromosome partitioning protein [Rickettsia rickettsii str. Iowa]
gi|157800442|gb|ABV75695.1| stage 0 sporulation protein J [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907736|gb|ABY72032.1| chromosome partitioning protein [Rickettsia rickettsii str. Iowa]
Length = 286
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 95/305 (31%), Positives = 157/305 (51%), Gaps = 56/305 (18%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGL++L+GE SI+S E I+I I PN + PR FE
Sbjct: 1 MAKN---KGLGRGLSSLLGEEVISIES---------EIVQIINIDKIRPNENQPRKNFEY 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD--- 117
+ +++L SI ++G++QP+IV + ++IIAGERR+RA K+A + E+PVII+N+D
Sbjct: 49 DKIKELADSILNNGLLQPIIV----DNNFQIIAGERRWRACKLAKVLEIPVIIKNLDARE 104
Query: 118 -------------NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+ + +EEA G++ LI + YT + +GK
Sbjct: 105 SMEIALIENIQRTDLTV----------------MEEARGFKYLIENFNYTVEKLAERLGK 148
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
SRSH+AN+LR+ LP S+++ + + +S+G AR L++ +A I++ ++VR TEE
Sbjct: 149 SRSHIANLLRLNNLPQSIQDKVNENILSMGQARCLINHEHAEVIADYIINNDLNVRQTEE 208
Query: 225 LVQEQDNKKEKRKKIFEGSREK--------EKYLTDLEKKISSKVGLNISIKHRNNKGQF 276
LV++ + + K L L K +S K G+ I+I++ G+
Sbjct: 209 LVRQWYKNEYTKSPNNNNKIGKRFLKDNTTNNDLELLVKVLSEKFGIKITIENYPLGGKL 268
Query: 277 CIKYE 281
Y+
Sbjct: 269 IFHYK 273
>gi|218516418|ref|ZP_03513258.1| chromosome partitioning protein B [Rhizobium etli 8C-3]
Length = 220
Score = 102 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 132/217 (60%), Positives = 167/217 (76%), Gaps = 3/217 (1%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
GRGLAALIGE++Q + ++T + I I + NP NPR +F+ L DL SI
Sbjct: 2 GRGLAALIGEMDQPVPVEAERTVSAD---RMIPIEFVSRNPRNPRRFFDDTELHDLASSI 58
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+ HGI+QP++VR ++ Y+IIAGERR+RAA++A L E+PVIIR+VD+K++LEIAIVENV
Sbjct: 59 RQHGIVQPIVVRTMERDRYEIIAGERRWRAAQLAGLIEIPVIIRDVDDKTALEIAIVENV 118
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
QR DLNPLEEALGYEQLI+EYGYTQND+G I+GKSRSHVAN LR+LKLP VR+++
Sbjct: 119 QRADLNPLEEALGYEQLIAEYGYTQNDLGEIIGKSRSHVANSLRLLKLPDPVRDLLAAGS 178
Query: 191 ISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQ 227
+S GHAR LVST DP SLA+ IV+K MSVRD E+L Q
Sbjct: 179 LSAGHARALVSTPDPASLARTIVAKGMSVRDAEKLAQ 215
>gi|310659878|ref|YP_003937599.1| spo0j [Clostridium sticklandii DSM 519]
gi|308826656|emb|CBH22694.1| Spo0J [Clostridium sticklandii]
Length = 255
Score = 102 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 140/256 (54%), Gaps = 9/256 (3%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ I I I P PR F+ L++L SIK +GI+QP+IV ++G I AGERR
Sbjct: 5 KLENIPIKEIYPRKDQPRKSFDKNTLDELATSIKKYGILQPIIVSKAEDGYAII-AGERR 63
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
++AAK+A+L +P I++ D ++ EIA++EN+QR++LNP+EEA + E +Q+D
Sbjct: 64 YQAAKLANLHNLPCIVK--DKSNTREIALIENLQRENLNPIEEAKAIHTFMKESKLSQSD 121
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKM 217
+ SI+ KSRS++AN LR+L L + IS GHA+TL+ +A + +
Sbjct: 122 MASILAKSRSYIANRLRLLNLDEFTTSQLETRAISEGHAKTLLG------IADEKKRQAL 175
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
+ + E + + +++ RK ++ ++ + K++ + +S+K KG
Sbjct: 176 TQKIINEGLSVRQTEEQVRKSKPYKKSSEDVHIKEAMDKLTDILQTKVSLKGTQAKGTLT 235
Query: 278 IKYETNEQLKIICSLL 293
I+Y +QL + L
Sbjct: 236 IEYYNKDQLNELVEKL 251
>gi|332359497|gb|EGJ37316.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
sanguinis SK1056]
Length = 253
Score = 102 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 95/256 (37%), Positives = 151/256 (58%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYIALKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +I+ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAASFLGLETIPAVIKELSDDEMLKQAIIENLQREDLNPIEEAESYQNLIDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLAKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLEKICR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
L K ++KK + KE + E+KI +GL +SI+ + +KG+
Sbjct: 181 ED------LSVRAVEKLLQQKKSLKKKPNKELFAKSEEEKIKKILGLKVSIQLKSQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 235 LIIPFESEEEYQRIIN 250
>gi|291165906|gb|EFE27953.1| ParB family protein [Filifactor alocis ATCC 35896]
Length = 252
Score = 102 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 143/260 (55%), Gaps = 9/260 (3%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
I + I+P+P PR +F+ LE+L SI+ +G++ P+IVR + + AGERR
Sbjct: 2 ELQTIELQKIIPDPCQPRKFFDLAALEELASSIEQYGLLSPIIVRKQGDRYIIV-AGERR 60
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
+RA + ++ I+RN + E++++ENVQR+DLNPLEEA L+ E YTQ +
Sbjct: 61 YRAMLLNKMTHANCIVRNHIDFR--EVSLIENVQREDLNPLEEAEALSSLMIEKHYTQEE 118
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKM 217
+ ++GKSR ++ N LR+L+L ++ + ++IS H R+L+S + +++
Sbjct: 119 LSKLIGKSRPYITNQLRLLRLDDETKQALLDKKISEAHGRSLISLDNLKLRKKLLH---- 174
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
E + + +K+ ++ + ++ + YL DL +++ K+G ++++ KG+
Sbjct: 175 --AIIEHHLSVRTTEKKIKQWKQKEKQQHDVYLKDLLQQLEEKLGTKVTLQGSAKKGKLS 232
Query: 278 IKYETNEQLKIICSLLGEND 297
+ Y E L + L +++
Sbjct: 233 LFYFQEEDLASLIEKLLQDE 252
>gi|206603440|gb|EDZ39920.1| ParB-like partition protein [Leptospirillum sp. Group II '5-way
CG']
Length = 284
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 105/300 (35%), Positives = 153/300 (51%), Gaps = 28/300 (9%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K LGRGL +L E + I SI NP+ PR F E ++
Sbjct: 1 MAKHGLGRGLDSLF----------ESDGPEKKDEVYLIPCASITVNPYQPRKIFREEEIK 50
Query: 65 DLCQSIKSHGIIQPLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
++ QS+ +HG++QP++V ++G Y +I+GERR RAAKM +P I R+V +K
Sbjct: 51 EMAQSLLNHGLLQPIVVSRKKGDRESGEYILISGERRLRAAKMLEWEAIPAIERSVTDKD 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A++EN+QR DLNP+E A G+ +LI E+ +TQ + +G RS VAN LRIL L S
Sbjct: 111 LLELALIENLQRTDLNPVEIAEGFNRLIEEFHWTQEKLAQNLGMKRSTVANFLRILTLSS 170
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ I ISLGHA+ + + SLA+ IV KKMSVRD E+ + + K
Sbjct: 171 ETIQKIENGVISLGHAKVLLGVKDPKELSSLAEEIVQKKMSVRDLEQRISTKKEKNGYPV 230
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+G +K++ +SI K +F E E L + L E+D
Sbjct: 231 WAEKGK-----------EKLTHYFSRPVSIARTGKKIRFAFILENEEDLMRLIHQLSESD 279
>gi|256545939|ref|ZP_05473294.1| stage 0 sporulation protein J [Anaerococcus vaginalis ATCC 51170]
gi|256398361|gb|EEU11983.1| stage 0 sporulation protein J [Anaerococcus vaginalis ATCC 51170]
Length = 279
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 96/293 (32%), Positives = 154/293 (52%), Gaps = 17/293 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K+ LGRGL +LI E N+ ++ I + I PR F+ + LE
Sbjct: 1 MTKKTLGRGLGSLIPENNKK-----------NKAIVRIPLEKIYAREDQPRKNFDDKSLE 49
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L QSI+ +G++ P++++ Y+IIAGERRFRA+K+ L E+ II+NVD K +
Sbjct: 50 GLSQSIEKYGLLNPIVLKKNGIR-YEIIAGERRFRASKLLGLKEIDAIIKNVDTKDIDIL 108
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+IVENVQR+DL+ LEEA Y +L YG TQ++I VGKSRS++AN LR+LKL + ++
Sbjct: 109 SIVENVQREDLSGLEEANAYNELSKNYGMTQDEIAKTVGKSRSYIANTLRLLKLDENSKK 168
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ K IS ARTL+S D + ++ + +++ + + K +
Sbjct: 169 ELEKGNISSSQARTLLSIKDE----EDRKKSLYDFKNKKTNIRKVEKISSRNNKKNQKED 224
Query: 245 EKEKYL-TDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
++ L D E+K + + IK N + I + E+++ + L
Sbjct: 225 NLDRILFEDFEEKFIDLLNSKVEIKKNNETYRVTIDCFSIEEIENLYWRLKNG 277
>gi|323350828|ref|ZP_08086487.1| chromosome partitioning protein SpoOJ [Streptococcus sanguinis
VMC66]
gi|322123002|gb|EFX94705.1| chromosome partitioning protein SpoOJ [Streptococcus sanguinis
VMC66]
gi|325686476|gb|EGD28505.1| chromosome partitioning protein SpoOJ [Streptococcus sanguinis
SK72]
gi|327471607|gb|EGF17050.1| chromosome partitioning protein SpoOJ [Streptococcus sanguinis
SK408]
Length = 253
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 95/256 (37%), Positives = 152/256 (59%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYIALKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAASFLGLETIPAVVKELSDDDMLKQAIIENLQREDLNPIEEAESYQNLIDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLNKICR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQ 275
L K ++KK + KE + E+KI +GL +SI+ +N +KG+
Sbjct: 181 ED------LSVRAVEKLLQQKKSLKKKPNKEIFAKSEEEKIKKILGLEVSIQLKNQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 235 LIIPFESEEEYQRIIN 250
>gi|262281644|ref|ZP_06059413.1| chromosome segregation protein [Streptococcus sp. 2_1_36FAA]
gi|262262098|gb|EEY80795.1| chromosome segregation protein [Streptococcus sp. 2_1_36FAA]
Length = 254
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 81/259 (31%), Positives = 147/259 (56%), Gaps = 7/259 (2%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I I I NP+ PR F E L +L SIK +G+IQP+IVR Y+++AGER
Sbjct: 2 ENYQYILIKDIHTNPYQPRKDFSIEKLNELANSIKENGLIQPIIVRKSSIIGYELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAAK+A L+E+P +++++ + ++ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAAKIAGLTEIPALVKSLSDDEMMKQAIIENLQREDLNPIEEAESYQHLIYKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR ++ N++R+L+LP V + +++ IS HAR L+ +
Sbjct: 121 EIAQIMGKSRPYITNLVRLLQLPDFVLKAVKEGRISQAHARLLIKLKEKDQ-----KKWL 175
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQ 275
+ ++ V++ + + + ++ ++ + E+ + +G+++ I + G+
Sbjct: 176 EKIISSDISVRKLEKLLQTSTTKPKSENVQKIFIEEEEENLKKLLGVDVKISLSKKQTGK 235
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ + I + L
Sbjct: 236 ISISFSNQEEYERIINSLK 254
>gi|125719157|ref|YP_001036290.1| chromosome partitioning protein ParB or transcriptional regulator
Spo0J [Streptococcus sanguinis SK36]
gi|125499074|gb|ABN45740.1| Chromosome partitioning protein ParB or transcriptional regulator
Spo0J, putative [Streptococcus sanguinis SK36]
Length = 259
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 95/256 (37%), Positives = 154/256 (60%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 8 ENFQYIALKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 67
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 68 RFRAASFLGLETIPAVVKELSDDDMLKQAIIENLQREDLNPIEEAESYQNLIDKGL-THD 126
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GH+R LV + L + +
Sbjct: 127 EIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHSRLLVPLKEEEQLLWLNKICR 186
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQ 275
E+L K ++KK + KE + E+KI +GL +SI+ +N +KG+
Sbjct: 187 ------EDLSVRAVEKLLQQKKSLKKKPNKEIFAKSEEEKIKKILGLEVSIQLKNQSKGK 240
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 241 LIIPFESEEEYQRIIN 256
>gi|260893975|ref|YP_003240072.1| parB-like partition protein [Ammonifex degensii KC4]
gi|260866116|gb|ACX53222.1| parB-like partition protein [Ammonifex degensii KC4]
Length = 283
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 15/279 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
R LG+GL ALI V E I + I PNP R ++ E L
Sbjct: 3 KPRGLGKGLDALIPPV-----------TVAGEEIRQIRMEEIRPNPRQARTEWDEEELNA 51
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SI +G++ P++VR ++ G Y+++AGERR+RA + +P ++R+ D+ ++
Sbjct: 52 LAASIAEYGLLHPVVVRPVEGG-YELVAGERRWRACQRLGWETIPALVRSYDDLATACAL 110
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
+VEN+ R++LNPLEEA Y +LI E+G TQ ++ VGKSR+ VAN LR+L L V ++
Sbjct: 111 LVENLHRRELNPLEEATAYRRLIEEFGLTQEEVARRVGKSRAAVANTLRLLNLSPLVLQL 170
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+R+ +++ GHAR L++ + + K R E+ ++ R S E
Sbjct: 171 LREGQLTAGHARALLALPGAEEQ--ELFALKAVQRGMSVRALEEAIQRYCRSSSATASPE 228
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNE 284
+ + + S G +S++ + + + E
Sbjct: 229 -DPEVKEKLAVWSQAWGARVSLRPGKRSWRLELVFPNRE 266
>gi|332531228|ref|ZP_08407141.1| parB-like protein partition protein [Hylemonella gracilis ATCC
19624]
gi|332039335|gb|EGI75748.1| parB-like protein partition protein [Hylemonella gracilis ATCC
19624]
Length = 314
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 89/285 (31%), Positives = 156/285 (54%), Gaps = 17/285 (5%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ + + +VP + PR + L +L +SIK+ GI+ P++VR
Sbjct: 25 QAEPAPDGVVPQAGQVGSLRLDEMVPGMYQPRTRMDEGALYELAESIKAQGIMSPILVRK 84
Query: 84 IDNGL----YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+ G ++IIAGERRFRAAK+A L VPV++R V N+++ +A++EN+QR+DLNPLE
Sbjct: 85 LHEGPNAGKHEIIAGERRFRAAKLAGLDSVPVLVREVPNEAAAAMALIENIQREDLNPLE 144
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA G ++LI E+G T VG+SRS +N+LR+L L V+ M+ ++ +GHAR L
Sbjct: 145 EAQGLQRLIREFGLTHEQAAQAVGRSRSAASNLLRLLNLAEPVQAMLMAGDLDMGHARAL 204
Query: 200 V--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ + ++ A I +KK SVR+ E LV++ + + +EK + L +E+++
Sbjct: 205 LALDRATQITAANQIAAKKYSVREAESLVKKLGAEF--SLAPQKPGKEKSRDLKRVEEEL 262
Query: 258 SSKVGLNISIKHRNN---------KGQFCIKYETNEQLKIICSLL 293
S + + ++ + G+ +++ + ++L + L
Sbjct: 263 SDLLTAQVEVRVKKRVKRNGRVEEMGELSVQFGSLDELNGLIDRL 307
>gi|328945173|gb|EGG39328.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
sanguinis SK1087]
Length = 253
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 96/256 (37%), Positives = 154/256 (60%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYIALKDIRTNPYQPRKQFSQKKIEELASSIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAASFLGLETIPSVVKELSDDEMLKQAIIENLQREDLNPIEEAESYQNLIDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLEKICR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQ 275
E+L K ++KK + KE + E+KI +GL +SI+ +N +KG+
Sbjct: 181 ------EDLSVRAVEKLLQQKKSLKKKPNKELFAKSEEEKIKKILGLEVSIQLKNQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 235 LIIPFESEEEYQRIIN 250
>gi|187918299|ref|YP_001883862.1| probable chromosome partitioning protein ParB [Borrelia hermsii
DAH]
gi|119861147|gb|AAX16942.1| probable chromosome partitioning protein ParB [Borrelia hermsii
DAH]
Length = 270
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 146/264 (55%), Gaps = 3/264 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
++ + + E+ + I+ + + PR LE+L SIK +GI+QP++V DNG
Sbjct: 5 KEGFDKMNETFKMVDINLLDVDKSQPRKSINLAELEELSISIKENGILQPIVVF-HDNGR 63
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y ++ GERRFRAAK+A ++++PVI ++ ++++EN+QR++L P+EEA Y+ L+
Sbjct: 64 YNLVIGERRFRAAKLAGMNQIPVIEIETTRENKDFMSLIENIQRENLTPVEEAYAYKNLM 123
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
++ TQ + +GK+RS+VAN++RIL+L + + K+EISLGHA+ L+S D
Sbjct: 124 DKHSLTQKALSEKIGKNRSYVANLVRILELEQEILNSLHKKEISLGHAKVLLSLKDNQDR 183
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK 268
+ + + N + ++ +L +++ + S++ ISIK
Sbjct: 184 YGLYLLIIKKKLSVRDAENYVKNFYRPIN--DKSEILRDPFLNSVKEFLISRIQTKISIK 241
Query: 269 HRNNKGQFCIKYETNEQLKIICSL 292
KG+ I Y T+ LK I S+
Sbjct: 242 GSKEKGKIEISYFTSSDLKRIISI 265
>gi|224533501|ref|ZP_03674090.1| stage 0 sporulation protein J [Borrelia burgdorferi CA-11.2a]
gi|224513174|gb|EEF83536.1| stage 0 sporulation protein J [Borrelia burgdorferi CA-11.2a]
Length = 260
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I IH + + PR LE+L SIK +GI+QPLIV ++ I+ GERRFR
Sbjct: 6 KMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ L+ +PVI ++ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + I ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGHAKVILSLKDRQDRYNLYLMILKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K E E++ +L ++++ + K+ I IK NKG+ I+
Sbjct: 185 FSVRDAEKYVKNFSKSIVKKRE--PEQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T LK I SL G
Sbjct: 243 YFTAGDLKRIVSLFG 257
>gi|157150241|ref|YP_001451373.1| chromosome segregation protein [Streptococcus gordonii str. Challis
substr. CH1]
gi|157075035|gb|ABV09718.1| chromosome segregation protein [Streptococcus gordonii str. Challis
substr. CH1]
Length = 254
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 81/259 (31%), Positives = 147/259 (56%), Gaps = 7/259 (2%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I I I NP+ PR F E L +L SIK +G+IQP+IVR Y+++AGER
Sbjct: 2 ENYQYILIKDIHTNPYQPRKDFSIEKLNELANSIKENGLIQPIIVRKSSIIGYELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAAK+A L+E+P +++++ + ++ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAAKIAGLTEIPALVKSLSDDEMMKQAIIENLQREDLNPIEEAESYQNLIYKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR ++ N++R+L+LP V + +++ IS HAR L+ +
Sbjct: 121 EIAQIMGKSRPYITNLVRLLQLPDFVLKAVKEGHISQAHARLLIKLKEKDQ-----RKWL 175
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQ 275
++ ++ V++ + + + ++ ++ + E+ + +G+ + I + G+
Sbjct: 176 ENIISSDISVRKLEKLLQTSPIKSKSENVQKIFIEEEEENLKKLLGVEVKISLSKKQTGK 235
Query: 276 FCIKYETNEQLKIICSLLG 294
I + E+ + I + L
Sbjct: 236 ISISFSNQEEYERIINSLK 254
>gi|119953222|ref|YP_945431.1| probable chromosome partitioning protein ParB [Borrelia turicatae
91E135]
gi|119861993|gb|AAX17761.1| probable chromosome partitioning protein ParB [Borrelia turicatae
91E135]
Length = 270
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 86/264 (32%), Positives = 145/264 (54%), Gaps = 3/264 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
++ + + E+ + I+ + + PR LE+L SI+ +GI+QP++V DNG
Sbjct: 5 KEVFDKMSETFKMVDINLVDVDKSQPRKSINLAELEELSISIRENGILQPIVVF-HDNGR 63
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y ++ GERRFRAAK+A + ++ +I K+ ++++EN+QR++L P+EEA Y+ L+
Sbjct: 64 YHLVIGERRFRAAKLAGMRQISIIEIETTRKNKDFMSLIENIQRENLTPVEEAYAYKNLM 123
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
++ TQ + +GK+RSHVAN++RIL L + + K+EISLGHA+ L+S D
Sbjct: 124 DKHSLTQRALSEKIGKNRSHVANLVRILDLEQEILNSLHKKEISLGHAKVLLSLKDSQDR 183
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK 268
+ + E N + E SR + +L +++ + S++ ISIK
Sbjct: 184 YGLYLLIIKKKLSVRETENYVKNFYKPINDKSEISR--DPFLNSVKEFLISRIQTKISIK 241
Query: 269 HRNNKGQFCIKYETNEQLKIICSL 292
KG+ I Y T+ LK I S+
Sbjct: 242 GSKEKGKIEISYFTSSDLKRIISI 265
>gi|325695759|gb|EGD37658.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
sanguinis SK150]
Length = 253
Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 97/256 (37%), Positives = 155/256 (60%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYIALKDIRNNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAASFLGLETIPAVVKELSDDDMLKQAIIENLQREDLNPIEEAESYQNLIDKDL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLKKICR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN-NKGQ 275
E+L K ++KKI + KE + E+KI +GL +SI+ +N +KG+
Sbjct: 181 ------EDLSVRAVEKLLQQKKILKKKPNKELFAKSEEEKIKKILGLEVSIQLKNQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 235 LIIPFESEEEYQRIIN 250
>gi|148654302|ref|YP_001274507.1| parB-like partition protein [Roseiflexus sp. RS-1]
gi|148566412|gb|ABQ88557.1| parB-like partition protein [Roseiflexus sp. RS-1]
Length = 301
Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 144/310 (46%), Gaps = 32/310 (10%)
Query: 5 YSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+ R LG GLAALI +T SI SI NP+ PR+ F+ L
Sbjct: 1 MKRPRGLGSGLAALIP------------GDTERTIVREASIDSIDANPYQPRSDFDESAL 48
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
++L SI+ HGIIQPLIV D+G Y++IAGERR RAA+ A L VPVI+R + +LE
Sbjct: 49 DELAASIREHGIIQPLIVTERDDGRYELIAGERRLRAARRAGLDRVPVIVRESTPQQALE 108
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR DLN LEEA Y+ L E+G + I VG+SR VAN R+L L +
Sbjct: 109 IALIENIQRADLNALEEAHAYQTLKDEFGLSDEAIAQRVGRSREAVANTRRLLGLAPVAQ 168
Query: 184 EMIRKEEISLGHARTLVS-------------------TSDPLSLAQVIVSKKMSVRDTEE 224
+ + IS GH R L+ + +
Sbjct: 169 QALLAGRISAGHGRALLRLVDQAAQEATVAAIIDHDLNVREVERLTDYARTTGDIHRALS 228
Query: 225 LVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNE 284
V+ + + ++ ++ + + +++ +G +S+ + + I + T E
Sbjct: 229 AVRPRLDAEKPDRRQRAARPDPSPDDQAIRRELERLLGTPVSLVRSERELRVTIVFHTGE 288
Query: 285 QLKIICSLLG 294
+L+ L
Sbjct: 289 KLQEFFDRLS 298
>gi|324991867|gb|EGC23790.1| chromosome partitioning protein SpoOJ [Streptococcus sanguinis
SK405]
gi|324996243|gb|EGC28153.1| chromosome partitioning protein SpoOJ [Streptococcus sanguinis
SK678]
gi|325698033|gb|EGD39914.1| chromosome partitioning protein SpoOJ [Streptococcus sanguinis
SK160]
gi|327458491|gb|EGF04841.1| chromosome partitioning protein SpoOJ [Streptococcus sanguinis SK1]
Length = 253
Score = 99.8 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 94/256 (36%), Positives = 151/256 (58%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYIALKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAASFLGLETIPAVVKELSDDEMLKQAIIENLQREDLNPIEEAESYQSLIDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLEKICR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
L K ++KK + KE + E+KI +GL +SI+ + +KG+
Sbjct: 181 ED------LSVRAVEKLLQKKKSIKKKSNKELFAKSEEEKIKKILGLEVSIQLKSQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 235 LIIPFESEEEYQRIIN 250
>gi|332365093|gb|EGJ42858.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
sanguinis SK355]
Length = 253
Score = 99.8 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 94/256 (36%), Positives = 151/256 (58%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYIALKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAASFLGLETIPAVVKELSDDEMLKQAIIENLQREDLNPIEEAESYQNLIDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLEKICR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
L K ++KK + KE + E+KI +GL +SI+ + +KG+
Sbjct: 181 ED------LSVRAVEKLLQQKKSLKKKPNKELFAKSEEEKIKKILGLEVSIQLKSQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 235 LIIPFESEEEYQRIIN 250
>gi|227494181|ref|ZP_03924497.1| stage 0 DNA-binding protein [Actinomyces coleocanis DSM 15436]
gi|226831915|gb|EEH64298.1| stage 0 DNA-binding protein [Actinomyces coleocanis DSM 15436]
Length = 393
Score = 99.8 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 89/297 (29%), Positives = 152/297 (51%), Gaps = 27/297 (9%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
QS + + I PN PR F+ E L +L +SIK G++QP++V
Sbjct: 88 PQSNPEVVDLVPVPGARMAYLRVAEIAPNLDQPREQFDPELLTELSESIKEIGVLQPIVV 147
Query: 82 -----------------------RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
Y++I GERR RA+K+A L+E+P IIR+ +
Sbjct: 148 REVVKNSARFKALTEARKATDDGNENAEIKYELIMGERRLRASKLAGLTEIPAIIRDTQD 207
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
L A++EN+ R LNP+EEA Y+QL+ E+G TQ ++ + +SR ++N +R+LKL
Sbjct: 208 DDMLRDALLENLHRAQLNPIEEAAAYQQLLEEFGCTQEELSKRIKRSRPQISNTMRLLKL 267
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDP---LSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
P +V+ ++ + +S+GHAR L+S D ++A I+ + +SVR TEELV +
Sbjct: 268 PHAVQLLVMENLLSMGHARALLSLEDSALIETVAHRIIDEGLSVRATEELVAKGGKA-TA 326
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSL 292
K + R T +++++S +G +++ R G+ +++ + L+ I +L
Sbjct: 327 NAKASKDVRPLSIQGTFIQERLSDLLGAKVTVDQRKRTGKIVVEFGGADDLERIAAL 383
>gi|325689353|gb|EGD31359.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
sanguinis SK115]
Length = 253
Score = 99.8 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 94/256 (36%), Positives = 151/256 (58%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYIALKDIRTNPYQPRKQFSQKKIEELASSIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAASFLGLETIPAVVKELSDDEMLKQAIIENLQREDLNPIEEAESYQNLIDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLAKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLNKICR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
L K ++KK + KE + E+KI +GL +SI+ + +KG+
Sbjct: 181 ED------LSVRAVEKLLQQKKSLKKKPNKELFAKSEEEKIKKILGLEVSIQLKSQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 235 LIIPFESEEEYQRIIN 250
>gi|157825215|ref|YP_001492935.1| stage 0 sporulation protein J [Rickettsia akari str. Hartford]
gi|157799173|gb|ABV74427.1| stage 0 sporulation protein J [Rickettsia akari str. Hartford]
Length = 286
Score = 99.8 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 95/305 (31%), Positives = 157/305 (51%), Gaps = 56/305 (18%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGL++L+GE SI+S E I+I I PN + PR E
Sbjct: 1 MAKN---KGLGRGLSSLLGEEVISIES---------ERIQTINIDKIRPNENQPRKNLEY 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD--- 117
+ +++L SI ++G++QP+IV + ++IIAGERR+RA K+A + E+PVII+N+D
Sbjct: 49 DKIKELADSILNNGLLQPIIV----DNNFQIIAGERRWRACKLAKVLEIPVIIKNLDARE 104
Query: 118 -------------NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+ + +EEA G++ L+ + YT + +GK
Sbjct: 105 SMEIALIENIQRTDLTV----------------MEEARGFKYLVENFNYTTEKLAERLGK 148
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
SRSH+AN+LR+ LP S+++ + +S+G AR L++ +A I+ ++VR TEE
Sbjct: 149 SRSHIANLLRLNNLPQSIQDKLNDNILSMGQARCLINHEHAEVIADHIIKNDLNVRQTEE 208
Query: 225 LVQEQDNKKEKRKKIFEGSREK--------EKYLTDLEKKISSKVGLNISIKHRNNKGQF 276
LV++ + K+ EK + L L K +S K G+ I+I++ G+
Sbjct: 209 LVRQWYKNECKKSPKNNHKVEKRFLKDNAADNDLELLVKALSEKFGIEITIENYQLGGKL 268
Query: 277 CIKYE 281
Y+
Sbjct: 269 IFHYK 273
>gi|260654327|ref|ZP_05859817.1| ParB family protein [Jonquetella anthropi E3_33 E1]
gi|260630960|gb|EEX49154.1| ParB family protein [Jonquetella anthropi E3_33 E1]
Length = 311
Score = 99.8 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 93/272 (34%), Positives = 149/272 (54%), Gaps = 15/272 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ SKR LGRGL+ L+ + + PE + + PE + ++ PNP PR +F+
Sbjct: 1 MAQVGSKR-LGRGLSDLL-KAPMAETKPEAQGDYAPEY----PMENLRPNPEQPRRHFDD 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SIK+HG++QP++ R +++G I+AGERR+RAAK+A L VPV D++
Sbjct: 55 EALKELASSIKAHGLLQPILARRLNDG-AIIVAGERRYRAAKLAGLLTVPVRFVEADDRR 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ E+A+VEN+QR+DL PLE A +L ++G TQ+++ +G SRS V+N +R+L LP
Sbjct: 114 TREMALVENLQREDLKPLELASALRELTEKFGLTQDELSKRLGWSRSAVSNKMRLLSLPQ 173
Query: 181 SVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
V + + E I+ GHAR L+ S + V SVR E V+ ++
Sbjct: 174 PVADALAGEAITEGHARALLGLESEEAIKRVLSECVRLNWSVRQVENRVRRLCLQQGMPP 233
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKH 269
+ +++ +G+ SI
Sbjct: 234 QRKARCWRPRS-----AARLARDLGVKCSISG 260
>gi|221218011|ref|ZP_03589477.1| stage 0 sporulation protein J [Borrelia burgdorferi 72a]
gi|225549610|ref|ZP_03770576.1| stage 0 sporulation protein J [Borrelia burgdorferi 118a]
gi|221191959|gb|EEE18180.1| stage 0 sporulation protein J [Borrelia burgdorferi 72a]
gi|225369887|gb|EEG99334.1| stage 0 sporulation protein J [Borrelia burgdorferi 118a]
Length = 260
Score = 99.4 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I IH + + PR LE+L SIK +GI+QPLIV ++ I+ GERRFR
Sbjct: 6 KMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ L+ +PVI ++ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + I ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGHAKVILSLKDRQDRYNLYLMILKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K E E++ +L ++++ + K+ I IK NKG+ I+
Sbjct: 185 FSVRDAEKYVKNFSKSIVKKREL--EQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T LK I SL G
Sbjct: 243 YFTAGDLKRIVSLFG 257
>gi|332363605|gb|EGJ41386.1| chromosome partitioning protein SpoOJ [Streptococcus sanguinis
SK1059]
Length = 253
Score = 99.4 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 94/256 (36%), Positives = 151/256 (58%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYIALKDIRTNPYQPRKQFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAASFLGLETIPAVVKELSDDEMLKQAIIENLQREDLNPIEEAESYQNLIDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLEKIYR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
L K ++KK + KE + E+KI +GL +SI+ + +KG+
Sbjct: 181 ED------LSVRAVEKLLQKKKSLKKKPNKELFAKSEEEKIKKILGLEVSIQLKSQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 235 LIIPFESEEEYQRIIN 250
>gi|319940206|ref|ZP_08014559.1| chromosome segregation protein [Streptococcus anginosus 1_2_62CV]
gi|319810677|gb|EFW07007.1| chromosome segregation protein [Streptococcus anginosus 1_2_62CV]
Length = 255
Score = 99.4 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 87/257 (33%), Positives = 139/257 (54%), Gaps = 8/257 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E I + I NP+ PR F E + +L SIK HGIIQP+IVR Y+++AGER
Sbjct: 2 EKYQYIELKDIQTNPYQPRKEFSEEKITELANSIKEHGIIQPIIVRKSPIIGYELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAAK+A L +P II+ + + ++ AI+EN+QR+DLNP+EEA Y+ LI + T
Sbjct: 62 RFRAAKLAGLQNIPAIIKELTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGL-THK 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I +GKSR ++ N +R+L LP ++ E I++ IS GHAR L++ S+
Sbjct: 121 EIAQTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHARLLINLSEKEQNQWF----- 175
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN--NKG 274
+ V++ + + ++ + +L + EK++ G IS++ G
Sbjct: 176 DKILSQSLSVRQLEKQLHSQQTKTVTKNKHHLFLKEEEKRLKKIFGTEISLQFSEQSQSG 235
Query: 275 QFCIKYETNEQLKIICS 291
+ CI + E+ + I
Sbjct: 236 KICIHFSNLEEYQRIID 252
>gi|327467739|gb|EGF13233.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
sanguinis SK330]
Length = 253
Score = 99.4 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 93/256 (36%), Positives = 151/256 (58%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFKYIALKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ L+ + T +
Sbjct: 62 RFRAASFLGLETIPAVVKELSDDEMLKQAIIENLQREDLNPIEEAESYQNLVDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLEKICR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
L K ++KK + KE + E+KI +GL +SI+ + +KG+
Sbjct: 181 ED------LSVRAVEKLLQQKKSLKKKPNKELFAKSEEEKIKKILGLEVSIQLKSQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 235 LIIPFESEEEYQRIIN 250
>gi|156740377|ref|YP_001430506.1| parB-like partition protein [Roseiflexus castenholzii DSM 13941]
gi|156231705|gb|ABU56488.1| parB-like partition protein [Roseiflexus castenholzii DSM 13941]
Length = 301
Score = 99.4 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 99/311 (31%), Positives = 150/311 (48%), Gaps = 33/311 (10%)
Query: 5 YSK-RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+ R LG GLAALI +T + I SI NP+ PR F+ L
Sbjct: 1 MKRPRGLGSGLAALIP------------ADTERTVVREVLIESIDANPYQPRTDFDESAL 48
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
++L SI+ HGIIQPLIV DNG Y++IAGERR RAA+ A L VPVI+R ++ +LE
Sbjct: 49 DELAASIREHGIIQPLIVTERDNGRYELIAGERRLRAARRAGLEHVPVIVRESTHQQALE 108
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
IA++EN+QR DLN LEEA Y+ L +E+G + I VG+SR VAN R+L L +
Sbjct: 109 IALIENIQRADLNALEEARAYQTLKNEFGLSDEAIAQRVGRSREAVANTRRLLGLAPVAQ 168
Query: 184 EMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR---- 236
+ + IS GH R L + + I+ ++VR+ E L +
Sbjct: 169 QALLAGRISAGHGRALLKLADDAVQEATVAAIIDYDLNVREVERLTDHARTTGDIHRALA 228
Query: 237 -------------KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETN 283
++ S + ++ +++ +G +S+ + + I + T
Sbjct: 229 AVRPRLPEETPVKRERASRSSDLSPDDQNIRRELERLLGTPVSLFRAERELRITIVFHTE 288
Query: 284 EQLKIICSLLG 294
E+++ L
Sbjct: 289 EKVQEFFDRLS 299
>gi|269118891|ref|YP_003307068.1| parB-like partition protein [Sebaldella termitidis ATCC 33386]
gi|268612769|gb|ACZ07137.1| parB-like partition protein [Sebaldella termitidis ATCC 33386]
Length = 269
Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 97/256 (37%), Positives = 145/256 (56%), Gaps = 7/256 (2%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFRAAKMA 104
I+ N PR F+ E LE+L +SIK +GIIQP+IVR I Y+IIAGERRFRA++MA
Sbjct: 10 KIILNSKQPRKKFDDEKLEELSKSIKEYGIIQPIIVRKIVSLNKYEIIAGERRFRASQMA 69
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
LS++PVI DN S EIA++ENVQR++LN +EEA Y LI Y YTQ ++ +GK
Sbjct: 70 GLSKIPVIEIASDNIKSFEIAVLENVQRENLNSIEEAEAYNNLIEVYNYTQEELAEKLGK 129
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
+RS ++N LR+L LP V++M+R+ ++S G ARTL++ D + ++ E
Sbjct: 130 TRSAISNKLRLLHLPEKVKQMVRENKLSYGQARTLLAFKDNTQIEELSDEIVKKQYSVRE 189
Query: 225 LVQEQDNKKEKRKKIFEGSRE-----KEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCI 278
L ++K K E + L+ K+ + IK ++G+ I
Sbjct: 190 LELMAKKSQKKDKTPKNKKSESVFEGSSDEIEYLKSKLIEFFESKVEIKLLNEDQGKLEI 249
Query: 279 KYETNEQLKIICSLLG 294
++ E L+ I ++L
Sbjct: 250 EFYGYEDLERILNILK 265
>gi|224532509|ref|ZP_03673134.1| stage 0 sporulation protein J [Borrelia burgdorferi WI91-23]
gi|224512581|gb|EEF82957.1| stage 0 sporulation protein J [Borrelia burgdorferi WI91-23]
Length = 260
Score = 99.0 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I IH + + PR LE+L SIK +GI+QPLIV ++ I+ GERRFR
Sbjct: 6 KMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ L+ +PVI ++ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENFTPVEEAYAYKNIMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + I ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGHAKVILSLKDRQDRYNLYLIILKKN 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K E E++ +L ++++ + K+ I IK NKG+ I+
Sbjct: 185 FSVRDAEKYVKNFSKSIVKKREL--EQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T LK I SL G
Sbjct: 243 YFTAGDLKRIVSLFG 257
>gi|15594779|ref|NP_212568.1| stage 0 sporulation protein J (spo0J) [Borrelia burgdorferi B31]
gi|195942014|ref|ZP_03087396.1| stage 0 sporulation protein J (spo0J) [Borrelia burgdorferi 80a]
gi|218249938|ref|YP_002374945.1| stage 0 sporulation protein J [Borrelia burgdorferi ZS7]
gi|223888863|ref|ZP_03623454.1| stage 0 sporulation protein J [Borrelia burgdorferi 64b]
gi|226321743|ref|ZP_03797269.1| stage 0 sporulation protein J [Borrelia burgdorferi Bol26]
gi|12230415|sp|O51395|PARB_BORBU RecName: Full=Probable chromosome-partitioning protein parB
gi|2688339|gb|AAC66804.1| stage 0 sporulation protein J (spo0J) [Borrelia burgdorferi B31]
gi|218165126|gb|ACK75187.1| stage 0 sporulation protein J [Borrelia burgdorferi ZS7]
gi|223885679|gb|EEF56778.1| stage 0 sporulation protein J [Borrelia burgdorferi 64b]
gi|226232932|gb|EEH31685.1| stage 0 sporulation protein J [Borrelia burgdorferi Bol26]
Length = 260
Score = 99.0 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I IH + + PR LE+L SIK +GI+QPLIV ++ I+ GERRFR
Sbjct: 6 KMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ L+ +PVI ++ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENFTPVEEAYAYKNIMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + I ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGHAKVILSLKDRQDRYNLYLIILKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K E E++ +L ++++ + K+ I IK NKG+ I+
Sbjct: 185 FSVRDAEKYVKNFSKSIVKKREL--EQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T LK I SL G
Sbjct: 243 YFTAGDLKRIVSLFG 257
>gi|203284342|ref|YP_002222082.1| stage 0 sporulation protein J [Borrelia duttonii Ly]
gi|203287876|ref|YP_002222891.1| stage 0 sporulation protein J [Borrelia recurrentis A1]
gi|201083785|gb|ACH93376.1| stage 0 sporulation protein J [Borrelia duttonii Ly]
gi|201085096|gb|ACH94670.1| stage 0 sporulation protein J [Borrelia recurrentis A1]
Length = 260
Score = 99.0 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 91/257 (35%), Positives = 142/257 (55%), Gaps = 3/257 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
ES + I+ + + PR LE+L SIK +GI+QP+IV NG Y II GE
Sbjct: 2 DESLKMVDINLLDIDKSQPRKSINLAELEELSISIKENGILQPIIVYPN-NGRYNIIIGE 60
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RRFRAAK++ +S++PVI K ++++EN+QR++L P+EEA Y+ L+ ++ TQ
Sbjct: 61 RRFRAAKLSGMSQIPVIEIEASTKDKDFMSLIENIQRENLTPVEEAYAYKNLMDKHALTQ 120
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+ +GK+RSHVAN++RIL+L + + K+EISLGHA+ L+S D + +
Sbjct: 121 KALSEKIGKNRSHVANLVRILELEQEILNSLHKKEISLGHAKVLLSLKDNQDRYALYLLI 180
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQ 275
+ N + E SR + +L +++ + S++ ISIK KG+
Sbjct: 181 IKKKLSVRDAENYVKNLYKTINDKSEISR--DPFLNSIKEFLISRIQTKISIKGSKEKGK 238
Query: 276 FCIKYETNEQLKIICSL 292
I Y T+ LK I S+
Sbjct: 239 IEISYFTSSDLKRIISI 255
>gi|312148471|gb|ADQ31130.1| stage 0 sporulation protein J [Borrelia burgdorferi JD1]
gi|312149194|gb|ADQ29265.1| stage 0 sporulation protein J [Borrelia burgdorferi N40]
Length = 260
Score = 99.0 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I IH + + PR LE+L SIK +GI+QPLIV ++ I+ GERRFR
Sbjct: 6 KMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKSNDRYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ L+ +PVI ++ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENFTPVEEAYAYKNIMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + I ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGHAKVILSLKDRQDRYNLYLIILKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K E E++ +L ++++ + K+ I IK NKG+ I+
Sbjct: 185 FSVRDAEKYVKNFSKSIVKKREL--EQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T LK I SL G
Sbjct: 243 YFTAGDLKRIVSLFG 257
>gi|327463833|gb|EGF10149.1| chromosome partitioning protein SpoOJ [Streptococcus sanguinis
SK1057]
Length = 253
Score = 98.6 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 95/256 (37%), Positives = 152/256 (59%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYIALKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAASFLGLETIPAVVKELSDDDMLKQAIIENLQREDLNPIEEAESYQNLIDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLEKICR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
L K ++KK + KE + E+KI +GL++SI+ + +KG+
Sbjct: 181 ED------LSVRAVEKLLQKKKSIKKKSNKELFAKSEEEKIKKILGLDVSIQLKSQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +ET E+ + I +
Sbjct: 235 LIIPFETEEEYQRIIN 250
>gi|324989577|gb|EGC21523.1| chromosome partitioning protein SpoOJ [Streptococcus sanguinis
SK353]
Length = 253
Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 93/256 (36%), Positives = 150/256 (58%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYIALKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRATSFLGLETIPAVVKELSDDEMLKQAIIENLQREDLNPIEEAESYQNLIDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLEKICR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
L K ++KK + KE + E+KI +GL +SI+ + +KG+
Sbjct: 181 ED------LSVRAVEKLLQKKKSIKKKSNKELFAKSEEEKIKKILGLEVSIQLKSQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 235 LIIPFESEEEYQRIIN 250
>gi|282856296|ref|ZP_06265577.1| stage 0 sporulation protein J [Pyramidobacter piscolens W5455]
gi|282585873|gb|EFB91160.1| stage 0 sporulation protein J [Pyramidobacter piscolens W5455]
Length = 319
Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 97/293 (33%), Positives = 154/293 (52%), Gaps = 14/293 (4%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
GRGL AL+ ++ +P++ + + I PNPH PR F+S L +L SI
Sbjct: 28 GRGLGALL---------AKQNVSRVPQNSEMAPLADIEPNPHQPRKLFDSATLHELAASI 78
Query: 71 KSHGIIQPLIVRAID---NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
K HG++QPLIV Y+I+AGERRF A ++A L+EVPV I D + EIA+V
Sbjct: 79 KVHGLLQPLIVTPAPAKSAKKYRIVAGERRFHACELAGLAEVPVRIVRGDEQLLSEIALV 138
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL LE A + L+ ++ TQN + +G SRS VAN LRIL LP + I
Sbjct: 139 ENLQREDLTVLEAANALKALMEKHQLTQNQLAERIGWSRSVVANKLRILSLPQCALDQIA 198
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR-DTEELVQEQDNKKEKRKKIFEGSREK 246
+S GHA+ L+S +P + +V ++ L + D+ +R + + +
Sbjct: 199 AGNLSEGHAKALLSLKEPQKFLEELVEDCVTHHWSVHNLQKRIDSLNSRRVTVLYKAPQL 258
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG-ENDF 298
+ + +++ ++GL+ S+ + + I Q++ + +LL E DF
Sbjct: 259 DPWRPKGALRVARRLGLSFSVFGNERENRVVINGMRRGQVERLFALLDREADF 311
>gi|225548669|ref|ZP_03769716.1| stage 0 sporulation protein J [Borrelia burgdorferi 94a]
gi|225370699|gb|EEH00135.1| stage 0 sporulation protein J [Borrelia burgdorferi 94a]
Length = 260
Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I IH + + PR LE+L SIK +GI+QPLIV ++ I+ GERRFR
Sbjct: 6 KMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ L+ +PVI ++ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + I ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGHAKVILSLKDRQDRYNLYLMILKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K E E++ +L ++++ + K+ I IK NKG+ I+
Sbjct: 185 ISVRDAEKYVKNFSKSIVKKREL--EQDPFLNNIKEFLFDKIQTKIYIKGNQNKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T LK I SL G
Sbjct: 243 YFTAGDLKRIVSLFG 257
>gi|254779689|ref|YP_003057795.1| putative plasmid replication-partition related protein
[Helicobacter pylori B38]
gi|254001601|emb|CAX29679.1| Putative plasmid replication-partition related protein
[Helicobacter pylori B38]
Length = 291
Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 101/299 (33%), Positives = 166/299 (55%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 2 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 55
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 56 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 114
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 115 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 174
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+LV++ K
Sbjct: 175 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLVRDFKTNANFENK 234
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + E L L + + L ++K + ++ N L+ +
Sbjct: 235 KHGFKQTQTLIAEDELERLNQSLWDHYKLKATLKGN----KIILRCYENSLLEAFMKKM 289
>gi|153829669|ref|ZP_01982336.1| ParB family protein [Vibrio cholerae 623-39]
gi|148874845|gb|EDL72980.1| ParB family protein [Vibrio cholerae 623-39]
Length = 174
Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 112/174 (64%), Gaps = 4/174 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + ++ + +SI ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSAEGELADLSISNLKPGIYQPRKDLSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAAK A L +VP +I+ V+++
Sbjct: 61 EALEELAASIQSQGIIQPIVVRHLPTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRG 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
++ +A++EN+QR+DLN +EEA E+L +E+ T + ++GKSR+ V N+LR
Sbjct: 121 AIAMALIENIQREDLNAMEEAQALERLQNEFNLTHQQVAEVIGKSRTTVTNLLR 174
>gi|317054746|ref|YP_004103213.1| parB-like partition protein [Ruminococcus albus 7]
gi|315447015|gb|ADU20579.1| parB-like partition protein [Ruminococcus albus 7]
Length = 304
Score = 98.2 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 173/297 (58%), Gaps = 11/297 (3%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K R+G GL L E Q ++ +S + I + PN PR+ F+ + L +
Sbjct: 3 KKNRMGSGLDMLFAENTQPETVSSEQE--SNDSVAMVKITLLEPNKDQPRSLFDDDKLSE 60
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L SIK +G++QP++ R +DNG Y+I+AGERR+RA+++A L+EVPV I+ +D+K ++++A
Sbjct: 61 LADSIKENGVLQPILARPLDNGGYQIVAGERRWRASRLAGLTEVPVYIKELDDKQTMQMA 120
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL+P+EEA Y+ L+ Y TQ + VGKSRS VAN LR+L+L ++VR+M
Sbjct: 121 LIENIQRQDLSPVEEAKAYKNLMDTYNMTQQQVAESVGKSRSAVANSLRLLELTATVRDM 180
Query: 186 IRKEEISLGHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQ-----DNKKEKRKK 238
+ E+S+GHA+ L D A+ I+S+ +SVR E+ +++ +++
Sbjct: 181 VDNGELSVGHAKVLSGVDDDKQCILAERIISEGLSVRQLEDEIKKLALSETKRSDDEKAS 240
Query: 239 IFEGSREKE-KYLTDLEKKISSKVGLNISIKHRNNKG-QFCIKYETNEQLKIICSLL 293
I + S +K+ +L + +++ N+ K G + +K + + S L
Sbjct: 241 IRKNSIKKDRPFLYEFMMSVNAVSDYNVKAKEERGGGVKVELKIPKEVDAETLLSKL 297
>gi|219684403|ref|ZP_03539347.1| stage 0 sporulation protein J [Borrelia garinii PBr]
gi|219672392|gb|EED29445.1| stage 0 sporulation protein J [Borrelia garinii PBr]
Length = 260
Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 77/255 (30%), Positives = 138/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I + + PR LE+L SIK +GI+QP+IV + I+ GERRFR
Sbjct: 6 KMIDIQLLDIDNDQPRKSVSPVELEELSISIKENGILQPIIVCKANERYRIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ ++ +PVI N++ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIKMTNIPVIEVNINESCRDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + + ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRAYISNLVRILDLEQEILNAVHRKEISFGHAKVILSLKDKQDRYNLYLMIVKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + + + E++ +L+++++ + K+ I IK +KG+ I+
Sbjct: 185 FSVRDAEKYVKNFYKSI--VRKRELEQDPFLSNIKEFLFDKIQTKIDIKGNQDKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T L+ I S G
Sbjct: 243 YFTAGDLRRIVSFFG 257
>gi|149193997|ref|ZP_01871095.1| stage 0 sporulation protein j [Caminibacter mediatlanticus TB-2]
gi|149135950|gb|EDM24428.1| stage 0 sporulation protein j [Caminibacter mediatlanticus TB-2]
Length = 276
Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 97/293 (33%), Positives = 156/293 (53%), Gaps = 21/293 (7%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+RLGRGL A++ + + I + I NP PR F E + +L
Sbjct: 2 KRLGRGLGAILEDAEAGYLK-----DLPNRGVSEIDVLKIKSNPFQPRREFNEESINELA 56
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKI-IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
+SIK HG+IQP+IV I +AGERR +A K ++ II + E A+
Sbjct: 57 ESIKKHGLIQPIIVIKDKKDDNYILVAGERRLKATKKLGKDKIKAIIVDYTVDDLREYAL 116
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DL+P+E AL +LI ++GYT +++ +GKSR+++ N+LRIL LP V E I
Sbjct: 117 IENIQREDLSPIEIALSLYELIKKHGYTHDELAKNLGKSRAYITNMLRILNLPEEVIEKI 176
Query: 187 RKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
RK+E+SLGHA+ LV S +A+ I+ + +SVR+TE+LV++ +
Sbjct: 177 RKKELSLGHAKVLVSLSNEKTKEIAEKILKENLSVRETEKLVKKIKEN--------KKDD 228
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ + + +K+ + + I K +KY+ + L+ + LLG N+
Sbjct: 229 YLNEDIIKITEKLKEN-DIKVEI----GKDFIKLKYKNDTDLEKLKKLLGINN 276
>gi|225551904|ref|ZP_03772844.1| stage 0 sporulation protein J [Borrelia sp. SV1]
gi|225370902|gb|EEH00332.1| stage 0 sporulation protein J [Borrelia sp. SV1]
Length = 260
Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 83/255 (32%), Positives = 138/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I IH + + PR LE+L SIK +GI+QPLIV ++ I+ GERRFR
Sbjct: 6 KMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ L+ +PVI ++ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIKLTNIPVIEVDIKESCRDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + + ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRTYISNLVRILDLEQEILNAVHRKEISFGHAKVILSLKDRQDRYNLYLMILKKN 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K E E++ +L ++++ + K+ I IK NKG+ I+
Sbjct: 185 FSVRDTEKYVKNFSKSIVKKREL--EEDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T LK I S G
Sbjct: 243 YFTAGDLKRIVSFFG 257
>gi|216264615|ref|ZP_03436607.1| stage 0 sporulation protein J [Borrelia burgdorferi 156a]
gi|215981088|gb|EEC21895.1| stage 0 sporulation protein J [Borrelia burgdorferi 156a]
Length = 260
Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 84/255 (32%), Positives = 138/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I IH + + PR LE+L SIK +GI+QPLIV ++ I+ GERRFR
Sbjct: 6 KMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ L+ +PVI ++ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + I ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGHAKVILSLKDRQDRYNLYLIILKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K E E++ +L ++++ + K+ I IK NKG+ I+
Sbjct: 185 FSVRDAEKYVKNFSKSIVKKREL--EQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T LK I S G
Sbjct: 243 YFTAGDLKRIVSFFG 257
>gi|51598688|ref|YP_072876.1| stage 0 sporulation protein J [Borrelia garinii PBi]
gi|51573259|gb|AAU07284.1| stage 0 sporulation protein J [Borrelia garinii PBi]
Length = 260
Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 77/256 (30%), Positives = 138/256 (53%), Gaps = 3/256 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I + + PR + LE+L SIK +GI+QP+IV + I+ GERRFR
Sbjct: 6 KMIDIQLLDIDNDQPRKFVSPVELEELSISIKENGILQPIIVCKANERYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ ++ +PVI N+ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQMTNIPVIEVNIKESCRDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + + ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRAYISNLVRILDLEQEILNAVHRKEISFGHAKVILSLKDKQDRYNLYLMIVKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + + + E++ +L+++++ + K+ I IK +KG+ I+
Sbjct: 185 FSVRDAEKYVKNFYKSI--VRKRELEQDPFLSNIKEFLFDKIQTKIDIKGNQDKGKIEIE 242
Query: 280 YETNEQLKIICSLLGE 295
Y T L+ I S G
Sbjct: 243 YFTAGDLRRIVSFFGN 258
>gi|332364163|gb|EGJ41940.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
sanguinis SK49]
Length = 253
Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 94/256 (36%), Positives = 151/256 (58%), Gaps = 8/256 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ +++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYVTLKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +I+ + + L+ AI+EN+QR+DLNP+EEA Y+ LI + T +
Sbjct: 62 RFRAASFLGLETIPAVIKELSDDEMLKQAIIENLQREDLNPIEEAESYQNLIDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV + L + +
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLAKEVRQAIKEEEISQGHARLLVPLKEEEQLLWLNKICR 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQ 275
L K ++KK + KE + E+KI +GL +SI+ + +KG+
Sbjct: 181 ED------LSVRAVEKLLQQKKSLKKKPNKELFAKSEEEKIKKILGLEVSIQLKSQSKGK 234
Query: 276 FCIKYETNEQLKIICS 291
I +E+ E+ + I +
Sbjct: 235 LIIPFESEEEYQRIIN 250
>gi|224534793|ref|ZP_03675365.1| stage 0 sporulation protein J [Borrelia spielmanii A14S]
gi|224514041|gb|EEF84363.1| stage 0 sporulation protein J [Borrelia spielmanii A14S]
Length = 260
Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 79/255 (30%), Positives = 139/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I + + PR + LE+L SIK +GI+QP+IV ++ I+ GERRFR
Sbjct: 6 KMIDIQLLDIDNDQPRKFVSLIELEELSISIKENGILQPIIVCKVNERYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ L+ +PVI N+ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQLTNIPVIEVNMKESCRDLMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + + ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRAYISNLVRILDLEQEILNAVHRKEISFGHAKVILSLKDKQDRYNLYLIILKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K + E++ +L+++++ + K+ I IK +KG+ I+
Sbjct: 185 FSVRDAEKYVKNFYKSIAK--KNKAEQDPFLSNIKEFLFDKIQTKIDIKGNQDKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T L+ I S G
Sbjct: 243 YFTASDLRRIVSFFG 257
>gi|108563501|ref|YP_627817.1| plasmid replication-partition related protein [Helicobacter pylori
HPAG1]
gi|107837274|gb|ABF85143.1| plasmid replication-partition related protein [Helicobacter pylori
HPAG1]
Length = 290
Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 100/299 (33%), Positives = 164/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEKKQELILNSIIGQKLSVRQTEDLARDFKTNANCENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELERLNQSLWDHYKLKAALKGN----KIILRCYENSLLEAFMKKM 288
>gi|217032675|ref|ZP_03438161.1| hypothetical protein HPB128_202g9 [Helicobacter pylori B128]
gi|298735859|ref|YP_003728384.1| ParB family chromosome partitioning protein [Helicobacter pylori
B8]
gi|216945605|gb|EEC24256.1| hypothetical protein HPB128_202g9 [Helicobacter pylori B128]
gi|298355048|emb|CBI65920.1| chromosome partitioning protein, ParB family [Helicobacter pylori
B8]
Length = 290
Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 101/299 (33%), Positives = 164/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKIFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 ESLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLARDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELERLNQSLWDHYKLKATLKGN----KIVLRCYENSLLEAFMKKM 288
>gi|269793316|ref|YP_003318220.1| parB-like partition protein [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100951|gb|ACZ19938.1| parB-like partition protein [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 317
Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 90/276 (32%), Positives = 143/276 (51%), Gaps = 20/276 (7%)
Query: 8 RRLGRGLAALIGEVNQS------------------IDSPEKKTETIPESQDCISIHSIVP 49
LGRGLA+LI + E S+ P
Sbjct: 5 SGLGRGLASLIPTDQAADQEDLKDAVTPKSPRASKSSKGETPEGAGAAPSQFAPCSSLEP 64
Query: 50 NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEV 109
NP PR +E+L SI+ HG++QPL+VR +G Y+I+AGERR+RAA A L+EV
Sbjct: 65 NPFQPRRVISESSIEELAASIRVHGVLQPLLVRRRGDGGYQIVAGERRWRAAMRAGLTEV 124
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P+ + +D+++ E A+VEN+QR+DL+PL+ A +LI ++ T I +G SRS V
Sbjct: 125 PIRVVEMDDRAMREAALVENLQREDLSPLDVAESINELIQQFSATHEAIAERLGWSRSAV 184
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQ 227
N LR+L+LP SV+ ++ +S GHAR L + +A++++ + +SVR TEELV+
Sbjct: 185 TNKLRLLQLPDSVKALVSSGALSEGHARALLRLPQEQMEPVARLVLQRGLSVRQTEELVR 244
Query: 228 EQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
+ ++ + + R Y + ++G+
Sbjct: 245 KMESPDREDEGAQRAKRAINHYPYSFADEFGVEIGM 280
>gi|219685212|ref|ZP_03540032.1| stage 0 sporulation protein J [Borrelia garinii Far04]
gi|219673308|gb|EED30327.1| stage 0 sporulation protein J [Borrelia garinii Far04]
Length = 260
Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 77/255 (30%), Positives = 137/255 (53%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I + + PR LE+L SIK +GI+QP+IV + I+ GERRFR
Sbjct: 6 KMIDIQLLDIDNDQPRKSVSPVELEELSISIKENGILQPIIVCKANERYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ ++ +PVI N+ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIKMTNIPVIEVNIKESCRDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + + ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRAYISNLVRILDLEQEILNAVHRKEISFGHAKVILSLKDKQDRYNLYLMIVKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + + + E++ +L+++++ + K+ I IK +KG+ I+
Sbjct: 185 FSVRDAEKYVKNFYKSI--VRKRELEQDPFLSNIKEFLFDKIQTKIDIKGNQDKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T L+ I S G
Sbjct: 243 YFTAGDLRRIVSFFG 257
>gi|317180870|dbj|BAJ58656.1| plasmid replication-partition related protein [Helicobacter pylori
F32]
Length = 290
Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 100/299 (33%), Positives = 164/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLARDFKINANFDNK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELERLNQSLWDHYKLKATLKGN----KIVLRCYENSLLEAFMKKM 288
>gi|126641597|ref|YP_001084581.1| chromosome partitioning protein [Acinetobacter baumannii ATCC
17978]
Length = 221
Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 70/211 (33%), Positives = 137/211 (64%), Gaps = 8/211 (3%)
Query: 85 DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
+ Y+IIAGERR+RAA++A L+E+P I+R+++++ ++ +A++EN+QR+DLNP+++AL
Sbjct: 12 EAHPYEIIAGERRWRAAQIAGLTEIPAIVRDLNDQVAIALALIENIQRQDLNPIDQALAL 71
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS--T 202
++ E+G + +I VGK+R+ V+N+LR+L L ++E +++ ++ +GHAR +++
Sbjct: 72 QRFHDEFGLSHQEIADTVGKARTTVSNLLRLLSLADDIKEFMQQGQLDMGHARAILTLKG 131
Query: 203 SDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVG 262
+ L +A++++ K +SVR TE+LV++ + K + + L +K+S + G
Sbjct: 132 KEQLEVAKIVIEKGLSVRQTEQLVRDWNE-----PKQEKEKAPVAPDIEQLTQKLSERFG 186
Query: 263 LNISIKHR-NNKGQFCIKYETNEQLKIICSL 292
N+ I H KG+ I Y + ++L I ++
Sbjct: 187 ANVKIDHNQKGKGKLVIHYHSLDELDGILNI 217
>gi|325846366|ref|ZP_08169335.1| ParB-like protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481550|gb|EGC84590.1| ParB-like protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 278
Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 16/292 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K+ LGRGL +LI E N+ ++ I + I PR F+ + L
Sbjct: 1 MTKKSLGRGLGSLIPENNKR-----------NKTIVRIPMEKIYTRKDQPRKNFDDKALL 49
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L QSI+ +G++ P+++R Y+IIAGERRFRA+K+ E+ II+NVDNK+ +
Sbjct: 50 GLSQSIEKYGLLNPIVLRKNGIK-YEIIAGERRFRASKLLGHKEIDAIIKNVDNKNIDIL 108
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+IVENVQR+DL LEEA Y +L Y TQ ++ VGKSRS++AN LR+LKL + +
Sbjct: 109 SIVENVQREDLTGLEEANAYNELCQNYNMTQEEVAKTVGKSRSYIANSLRLLKLDENSKR 168
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+++ IS ARTL+S D ++ + +++ + K K K I +
Sbjct: 169 ELQEGNISPSQARTLLSIKDE----DYRKKSLDDFKNKKTNIRKVEKKSRKNKSIKDDQN 224
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ D E+K + + IK + I + + ++ + +
Sbjct: 225 LDQILFEDFEEKFIDLLNSKVEIKKNKEGYRVSIDCFSIDDIENLYWSIKNG 276
>gi|312881075|ref|ZP_07740875.1| chromosome segregation DNA-binding protein [Aminomonas paucivorans
DSM 12260]
gi|310784366|gb|EFQ24764.1| chromosome segregation DNA-binding protein [Aminomonas paucivorans
DSM 12260]
Length = 288
Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 93/301 (30%), Positives = 150/301 (49%), Gaps = 26/301 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ LG+GLA+LI +TE + + + PNP PR +
Sbjct: 1 MARAA---GLGKGLASLIP----------TETEQAVSAPQTVPCSDLTPNPFQPRQTMDD 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
LE L QSI++HG++QPL+V G Y+I+AGERR+RAA MA ++EVPV I + D+++
Sbjct: 48 GSLESLAQSIRTHGVLQPLLV-RQSTGGYEIVAGERRWRAATMAGIAEVPVRIVDFDDRT 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A+VEN+QR+DL L+ A +L+ ++ T + + +G SRS V N LR+L+LP+
Sbjct: 107 MREVALVENLQREDLPALDIAESLNELVLQFSMTHDALAERLGWSRSAVTNKLRLLQLPT 166
Query: 181 SVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+VR+++ +++ GH R L S +AQ V + +VR E+ V+ + +
Sbjct: 167 AVRQLLSAGDLTEGHGRALLGLQDLSRMEDMAQEAVERGWNVRQLEDAVRRSNAPQTGNA 226
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLK--IICSLLGE 295
+ E+ I I Q + Q + I SL+ +
Sbjct: 227 PKAKRGGISTLPYGFAEEH-------QIEIAFSGKPEQLSLHLRNLTQSEAHRILSLVDQ 279
Query: 296 N 296
N
Sbjct: 280 N 280
>gi|317012915|gb|ADU83523.1| putative plasmid replication-partition related protein
[Helicobacter pylori Lithuania75]
Length = 290
Score = 96.3 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 102/299 (34%), Positives = 167/299 (55%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A +S + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMSTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+LV++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILHSIIGQKLSVRQTEDLVRDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + E L L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFRQTQTLIAEDELERLNQSLWDHYKLKAALKGN----KIILRCYENSLLEAFMKKM 288
>gi|15645752|ref|NP_207929.1| plasmid replication-partition related protein [Helicobacter pylori
26695]
gi|12230409|sp|O25758|PARB_HELPY RecName: Full=Probable chromosome-partitioning protein parB
gi|2314294|gb|AAD08184.1| plasmid replication-partition related protein [Helicobacter pylori
26695]
Length = 290
Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDGEKQELILNSIIGQKLSVRQTEDLARDFKINANFDNK 233
Query: 239 IFEGSREKE----KYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + L L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKQTQTLIAGDELERLNQSLWDHYKLKAALKGN----KIVLRCYENSLLEAFMKKM 288
>gi|294668630|ref|ZP_06733726.1| sulfite reductase flavoprotein, alpha component [Neisseria elongata
subsp. glycolytica ATCC 29315]
gi|291309392|gb|EFE50635.1| sulfite reductase flavoprotein, alpha component [Neisseria elongata
subsp. glycolytica ATCC 29315]
Length = 238
Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 13/242 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ S LGRGL +L+ + E ++ I P + PR +
Sbjct: 1 MAKQPS--GLGRGLDSLLSGS---------IEDGRDERLTTAAVGDIKPGRYQPRVQMDD 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L +SIK+ G+IQP+IVR Y++IAGERR+RA+++A L+E+PV+++N+ +++
Sbjct: 50 EALQELAESIKAQGVIQPVIVREHGLSQYELIAGERRWRASQLAGLTEIPVVVKNISDET 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + ++EN+QR++LNP+EEA G ++L E+ T I VGKSRS ++N LR+L LP
Sbjct: 110 ALAMGLIENLQRENLNPIEEARGLKRLADEFSLTHETIAKAVGKSRSAISNTLRLLALPE 169
Query: 181 SVREMIRKEEISLGHARTLVSTS--DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+E++ + + +GHAR L++ D L LAQ V SVR+ E Q K+ +
Sbjct: 170 PVQELLYRRHLEMGHARALLTLPVVDQLELAQKAVKNGWSVREVERRSQLAQQAKKAVPR 229
Query: 239 IF 240
Sbjct: 230 KP 231
>gi|254700688|ref|ZP_05162516.1| parB-like partition protein [Brucella suis bv. 5 str. 513]
gi|261751197|ref|ZP_05994906.1| parB-like partition protein [Brucella suis bv. 5 str. 513]
gi|261740950|gb|EEY28876.1| parB-like partition protein [Brucella suis bv. 5 str. 513]
Length = 132
Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 65/136 (47%), Positives = 93/136 (68%), Gaps = 6/136 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SK+RLGRGLAALIGE+ D P ++ + + I I + NP NPR F
Sbjct: 1 MNDDPSKKRLGRGLAALIGEI----DRPVEERKAPVPIERNIPIEFVTRNPRNPRRMFSE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LEDL QSIK HG++QP++VR +++IAGERR+RA++ A + +PVI+R+VD+
Sbjct: 57 TELEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWRASQRAGVDTIPVIVRDVDD 116
Query: 119 KSSLEIAIVENVQRKD 134
+ +LEIAI+ENVQR D
Sbjct: 117 RVALEIAIIENVQRAD 132
>gi|309790513|ref|ZP_07685071.1| parB-like partition protein [Oscillochloris trichoides DG6]
gi|308227429|gb|EFO81099.1| parB-like partition protein [Oscillochloris trichoides DG6]
Length = 391
Score = 95.9 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS +R LG GL ALIG ++ IS+ I N PR F+
Sbjct: 1 MS---RRRGLGSGLDALIGNATPET-----------QTVRMISVDRIRENRSQPRTRFDE 46
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPV-IIRNVDNK 119
+ LE+L SI+ HG+IQP+IV +++IAGERR+RAA+ A LSE+P + + +
Sbjct: 47 QALEELAASIREHGVIQPIIVCEDGADNFELIAGERRWRAARKAGLSEIPALVKSSTTPQ 106
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
LE+A+VENVQR DLNPLEE Y+ L ++G + ++I VGKSR V N+ R++KL
Sbjct: 107 QLLELALVENVQRSDLNPLEEGQAYQTLRDDFGLSDDEIAKRVGKSRVAVVNMRRLIKLG 166
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVI 212
+ R+ + +IS GH R L+ D + A ++
Sbjct: 167 TPARQALLDNKISAGHGRVLLRFEDADTQAVML 199
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQ 275
S D +E +++ + SR ++ + + +G + I +
Sbjct: 311 PRSSPDGVRSAREVEDEDADLPRSTPESRAQDAETRRI---FEALLGTPVQIVRSGGTIK 367
Query: 276 FCIKYETNEQLKIICSLLGENDF 298
I T++QL+ I LG D
Sbjct: 368 LTITLYTDDQLQQIYERLGGEDE 390
>gi|216263333|ref|ZP_03435328.1| stage 0 sporulation protein J [Borrelia afzelii ACA-1]
gi|215980177|gb|EEC20998.1| stage 0 sporulation protein J [Borrelia afzelii ACA-1]
Length = 260
Score = 95.5 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 79/255 (30%), Positives = 137/255 (53%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I + + PR LE+L SIK +GI+QP+IV ++ I+ GERRFR
Sbjct: 6 KMIDIQLLDIDNDQPRKSVSLVELEELSISIKENGILQPIIVCKVNERYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ ++ +PVI N+ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQMTNIPVIEVNIKESCRDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++NI+RIL L + + ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRTYISNIVRILDLEQEILNAVHRKEISFGHAKVILSLKDKQDRYNLYLIILKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K + E++ +L+ +++ + K+ I IK +KG+ I+
Sbjct: 185 FSVRDAEKYVKNFYKSITK--KKEVEQDPFLSSIKEFLFDKIQTKIDIKGNQDKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T L+ I S G
Sbjct: 243 YFTASDLRRIVSFFG 257
>gi|331011896|gb|EGH91952.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 97
Score = 95.5 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLS-SPTVTSLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ LE+L QSIK G++QP+++R I + ++IIAGERR+RA
Sbjct: 58 QALEELAQSIKLQGVMQPIVIRPIGDNRFEIIAGERRWRA 97
>gi|297380316|gb|ADI35203.1| ParB-like partition protein [Helicobacter pylori v225d]
Length = 290
Score = 95.5 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 100/299 (33%), Positives = 164/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+LV++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLVRDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELERFNQSLWDHYKLKATLKGN----KIVLRCYENSLLEAFMKKM 288
>gi|312794731|ref|YP_004027654.1| parb-like partition protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181871|gb|ADQ42041.1| parB-like partition protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 285
Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 100/290 (34%), Positives = 160/290 (55%), Gaps = 11/290 (3%)
Query: 7 KRRLGRGLAALIGE---VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
K+RLGRGL AL G+ ++ E E + I I I + + PR F E +
Sbjct: 2 KKRLGRGLDALFGDDVISSEKEKEEVISEEENIERIEEIDIDLIDLSENQPRKIFNEEEI 61
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SIKS G+IQPL+V+ + +IAGERR RA K+A + +V I++ +N +
Sbjct: 62 EELANSIKSVGLIQPLVVQKKGDKYV-LIAGERRLRACKLAGVQKVKCIVKEYENPLEIA 120
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ +EN+QRKDLNP E+AL +++L+ E+GYTQ ++ +G SRS VAN LRIL L +
Sbjct: 121 L--IENIQRKDLNPYEKALAFKRLMDEFGYTQEELAKRLGISRSKVANTLRILNLGKKII 178
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
++I + +IS GHA+ L+S D ++ EL + +K++ E
Sbjct: 179 DLIIEGKISEGHAKVLLSVEDEEQRNKLAELVAEKNLSVRELESIIKSSDDKKEFEVESE 238
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+E + + GL + I+ + NKG+ I++ ++E+L+ I S+L
Sbjct: 239 IIREIE-----ENLMKLFGLKVKIQKKKNKGKIEIEFSSDEELEKIISIL 283
>gi|111115260|ref|YP_709878.1| stage 0 sporulation protein J [Borrelia afzelii PKo]
gi|110890534|gb|ABH01702.1| stage 0 sporulation protein J [Borrelia afzelii PKo]
Length = 260
Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 79/255 (30%), Positives = 138/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I + + PR LE+L SIK +GI+QP+IV ++ I+ GERRFR
Sbjct: 6 KMIDIQLLDIDNDQPRKSVSLVELEELSISIKENGILQPIIVCKVNERYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ ++ +PVI N+ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQMTNIPVIEVNIKESCRDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++NI+RIL L + + ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRTYISNIVRILDLEQEILNAVHRKEISFGHAKVILSLKDKQDRYNLYLIILKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K + E++ +L+++++ + K+ I IK +KG+ I+
Sbjct: 185 FSVRDAEKYVKNFYKSITK--KKEVEQDPFLSNIKEFLFDKIQTKIDIKGNQDKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T L+ I S G
Sbjct: 243 YFTAGDLRRIVSFFG 257
>gi|224532006|ref|ZP_03672638.1| stage 0 sporulation protein J [Borrelia valaisiana VS116]
gi|224511471|gb|EEF81877.1| stage 0 sporulation protein J [Borrelia valaisiana VS116]
Length = 260
Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 82/255 (32%), Positives = 140/255 (54%), Gaps = 3/255 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I + + PR LE+L SIK +GI+QP+IV +N YKII GERRFR
Sbjct: 6 KMIDIQLLDIDNDQPRKSVSLVELEELSISIKENGILQPIIVCK-ENERYKIIVGERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ ++ +PVI ++ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQMTNIPVIEVDIKESYRDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+GKSR++++N++RIL L + + ++EIS GHA+ ++S D + +
Sbjct: 125 EKIGKSRAYISNLVRILDLDQEILNAVHRKEISFGHAKVILSLKDKQDRYNLYLMILKKK 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
+ + N + K E E++ +L+++++ + K+ I IK +KG+ I+
Sbjct: 185 FSVRDAEKYVKNFYKSIVKKREL--EQDPFLSNIKEFLFDKIQTKIDIKGNQDKGKIEIE 242
Query: 280 YETNEQLKIICSLLG 294
Y T L+ I S G
Sbjct: 243 YFTAGDLRRIVSFFG 257
>gi|207092574|ref|ZP_03240361.1| plasmid replication-partition related protein [Helicobacter pylori
HPKX_438_AG0C1]
Length = 290
Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSP 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDGEKQELILNSIIGQKLSVRQTEDLARDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + E L L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKQTQTLIAEDELECLNQSLWDHYKLKATLKGN----KIILRCYENSLLEAFMKKM 288
>gi|89898755|ref|YP_515865.1| chromosome partitioning protein [Chlamydophila felis Fe/C-56]
gi|89332127|dbj|BAE81720.1| chromosome partitioning protein [Chlamydophila felis Fe/C-56]
Length = 279
Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 79/269 (29%), Positives = 149/269 (55%), Gaps = 11/269 (4%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKI 91
++ ++I SI +P PR F L++L S+KS G+I P +VR Y++
Sbjct: 7 KDTIIEVAIDSIRVSPFQPRRVFSDSELQELVSSLKSVGLIHPPVVREIRSGDKVLYYEL 66
Query: 92 IAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
IAGERR+RA ++A + +PV+ + + + + E +VEN+QR +L+P+E A +++LI+
Sbjct: 67 IAGERRWRALQLAGYTIIPVVLKQVIADDIAAEATLVENIQRVNLSPMEMAEAFKKLINV 126
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL-- 208
+G TQ+ + VGK RS VAN LR+ L ++++ + EI+LGHA+ +++ DP
Sbjct: 127 FGLTQDKVALRVGKKRSTVANYLRLFSLSETIQKSLYSGEITLGHAKVILTLEDPKLREI 186
Query: 209 -AQVIVSKKMSVRDTEELVQEQDNKK---EKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
A+ I+S+ ++VR+ E+ ++ + K + ++++++S +G
Sbjct: 187 LAEKIISQHLAVREAEQEAKKLLAGEVVSTSSSKERVKTPSASSNYQEMQERLSQSLGYK 246
Query: 265 ISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++IK + + + + EQLK + L
Sbjct: 247 VTIKSQGSHHSVSLHVQDEEQLKQLEQWL 275
>gi|332978547|gb|EGK15255.1| chromosome partition ParB protein [Psychrobacter sp. 1501(2011)]
Length = 354
Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 86/360 (23%), Positives = 162/360 (45%), Gaps = 71/360 (19%)
Query: 1 MSNNYSKRRL--GRGLAALIGEVNQSID-------------------------------- 26
M+ KR L RGL AL+G + +
Sbjct: 1 MA---KKRGLAANRGLDALLGSIKKEKAITAAALRDDLQVDRETKDSPAQNESVIEDTKT 57
Query: 27 --------------------SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDL 66
P + + + + + + PR L +L
Sbjct: 58 AKKVAPRKKTAVNKVETTSVKPANEASDEEMTLMQMDVERLQAGKYQPRRDMSETALAEL 117
Query: 67 CQSIKSHGIIQPLIVRA--------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
SI+ HG++QP+++R D ++IIAGERR+RAAKMA + +P I R + +
Sbjct: 118 ASSIRQHGVMQPIVIRPLLANEEKVSDTITHEIIAGERRWRAAKMAGQNTIPAIERALSD 177
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ ++ +A++EN+QR+DL+ +E+A ++ +E+G + I +VGK+R+ V+N+LR+ L
Sbjct: 178 ELAIALALIENIQREDLSVIEQAAALQRFHTEFGMSHAMIAEVVGKARTTVSNLLRLNHL 237
Query: 179 PSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
V+ + + + +GHAR L +S+ +A+ I+ M+VRD E+LV +
Sbjct: 238 HEDVKTHLSEGHLDMGHARALLSLSSEQQPIIAEKIIEGSMTVRDAEKLV---KSILNPE 294
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNI-SIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
K S+ ++ + L +++S +G + + + KG I + ++E+L+ +
Sbjct: 295 KNTKPASQNEDLEIEKLNQQLSDYLGATVKLKQKKGGKGSMEIFFHSHEELEALLQHFKS 354
>gi|284097364|ref|ZP_06385488.1| ATPase, ParA family [Candidatus Poribacteria sp. WGA-A3]
gi|283831129|gb|EFC35115.1| ATPase, ParA family [Candidatus Poribacteria sp. WGA-A3]
Length = 484
Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 95/244 (38%), Positives = 142/244 (58%), Gaps = 12/244 (4%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K+ LG+GLAAL+ E +T+ I + IVPN H PR F E L
Sbjct: 250 MEKKALGKGLAALLPES---------ETKETGHVIHMIPVAKIVPNRHQPRKTFVEEELR 300
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+L +S+K HGI+QP++VR Y++IAGERRFRAA +A L VP +IR ++ S +
Sbjct: 301 ELVESVKRHGILQPVLVRRKSEDRYELIAGERRFRAATLAQLPAVPAVIRKSSDEESTIL 360
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+++EN+QR +LNP+EEA Y QLI E G TQ + VG+ R+ VANI R+L LP+ V+
Sbjct: 361 SLIENIQRSNLNPVEEAQAYRQLIDELGVTQEAVAERVGRDRASVANICRMLSLPTEVQG 420
Query: 185 MIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
M+ +++LGHA+ ++ + A+ I+ ++SVR E+LV++ K R +
Sbjct: 421 MVASGQLTLGHAKVILGIKNAEDQLTLAKRILRDRLSVRQVEQLVKKGSRKTRPRNRQGI 480
Query: 242 GSRE 245
S
Sbjct: 481 PSTP 484
>gi|57505333|ref|ZP_00371262.1| ParB family protein [Campylobacter upsaliensis RM3195]
gi|57016469|gb|EAL53254.1| ParB family protein [Campylobacter upsaliensis RM3195]
Length = 279
Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 96/284 (33%), Positives = 164/284 (57%), Gaps = 14/284 (4%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
+GL+ LIG++++ K+ I + I NP+ PR +F+ E LE+L SIK
Sbjct: 7 KGLSKLIGDLDEVYS---KELGLDTNQVSEIPLAKIDLNPYQPRKHFDEEALEELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
+G+IQP+IV D ++AGERR RA+K+ L + + +V K E+A++EN+Q
Sbjct: 64 EYGLIQPIIVLKKDGRYI-LVAGERRLRASKILGLKSILAFVADVKEKRLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ LI E+ TQ ++ SI+ KSR+ + N LR+L L + +++I + +I
Sbjct: 123 RENLNPIELAYSYKSLIEEHQITQENLASIIHKSRTQITNTLRLLNLEQTTQKLIAEGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D ++ I+ +K+SVRDTE++VQ N K+ K + S E ++
Sbjct: 183 SQGHAKILVGLKKDDEKTMVDSIIGQKLSVRDTEKIVQNLKN---KKPKDEKFSFEFDED 239
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++K + ++ GL N + + I +++K + +L
Sbjct: 240 MQKIKKIL-NQYGLKCE----NKREKLTIYLTNKDKIKKLFEIL 278
>gi|15618594|ref|NP_224880.1| chromosome partitioning protein [Chlamydophila pneumoniae CWL029]
gi|15836216|ref|NP_300740.1| chromosome partitioning protein [Chlamydophila pneumoniae J138]
gi|16752356|ref|NP_444614.1| ParB family chromosome partioning protein [Chlamydophila pneumoniae
AR39]
gi|33242043|ref|NP_876984.1| Soj antagonist [Chlamydophila pneumoniae TW-183]
gi|12230504|sp|Q9Z7M0|PARB_CHLPN RecName: Full=Probable chromosome-partitioning protein parB
gi|4376986|gb|AAD18823.1| Chromosome Partitioning Protein [Chlamydophila pneumoniae CWL029]
gi|7188998|gb|AAF37951.1| chromosome partioning protein, ParB family [Chlamydophila
pneumoniae AR39]
gi|8979056|dbj|BAA98891.1| chromosome partitioning protein [Chlamydophila pneumoniae J138]
gi|33236553|gb|AAP98641.1| Soj antagonist [Chlamydophila pneumoniae TW-183]
gi|269302469|gb|ACZ32569.1| ParB domain protein [Chlamydophila pneumoniae LPCoLN]
Length = 286
Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 81/275 (29%), Positives = 152/275 (55%), Gaps = 11/275 (4%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL----IVRAIDNG 87
E ++ ++I I +P PR F +E L++L SIK+ G+I P I
Sbjct: 3 EEISKDTIIEVAIDDIRVSPFQPRRVFSNEELQELIASIKAVGLIHPPVVREICTGDRVL 62
Query: 88 LYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
Y++IAGERR+RA ++A + +PVI + + ++ E ++EN+QR +LNP+E A +++
Sbjct: 63 YYELIAGERRWRAMQLAGATTIPVILKHVIADGTAAEATLIENIQRVNLNPIEMAEAFKR 122
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP- 205
LI +G TQ+ + VGK RS VAN LR+L L +++E + + +I+LGHA+ +++ DP
Sbjct: 123 LIHVFGLTQDKVAYKVGKKRSTVANYLRLLALSKTIQESLLQGQITLGHAKVILTLEDPI 182
Query: 206 --LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS---REKEKYLTDLEKKISSK 260
L ++I+ + ++VR+ E + ++ +++ ++ E K +L++++S
Sbjct: 183 LREKLNEIIIQEHLAVREAELIAKQLISEEGSSIELKPTPLDMAESSKQHEELQQRLSDL 242
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
G + IK R +K + + L+ + + L
Sbjct: 243 CGYKVQIKTRGSKATVSFHLQNTQDLQKLEAWLSS 277
>gi|212697400|ref|ZP_03305528.1| hypothetical protein ANHYDRO_01970 [Anaerococcus hydrogenalis DSM
7454]
gi|212675592|gb|EEB35199.1| hypothetical protein ANHYDRO_01970 [Anaerococcus hydrogenalis DSM
7454]
Length = 278
Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 91/292 (31%), Positives = 149/292 (51%), Gaps = 16/292 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+K+ LGRGL +LI E N+ ++ I + I PR F+ + L
Sbjct: 1 MTKKSLGRGLGSLIPENNKR-----------NKTIVRIPMEKIYTRKDQPRKNFDDKALL 49
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L QSI+ +G++ P+++R Y+IIAGERRFRA+K+ E+ II+NVDNK+ +
Sbjct: 50 GLSQSIEKYGLLNPIVLRKNGIK-YEIIAGERRFRASKLLGHKEIDAIIKNVDNKNIDIL 108
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+IVENVQR+DL LEEA Y +L Y TQ+++ VGKSRS++AN LR+LKL + +
Sbjct: 109 SIVENVQREDLTGLEEANAYNELCQNYNMTQDEVAKTVGKSRSYIANSLRLLKLDENSKR 168
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+++ IS ARTL+S D ++ + +++ + K K K I +
Sbjct: 169 ELQEGNISSSQARTLLSIKDE----DDRKKSLDDFKNKKTNIRKVEKKSRKNKSIKDDQN 224
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ D E+K + + I+ + I + + ++ + +
Sbjct: 225 LDQILFEDFEEKFIDLLNSKVEIRKNKEGYRVSIDCFSIDDIENLYWSIKNG 276
>gi|37785812|gb|AAR02619.1| SpoOJ [Aeromonas hydrophila]
Length = 151
Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 87/148 (58%), Gaps = 8/148 (5%)
Query: 6 SKRRLGRGLAALIGEVNQSID--------SPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
KR LG+GL AL+ + + + T + + + + PR
Sbjct: 4 KKRGLGKGLDALLSTSTAARQKQVMSDQRTEQAMAPTNQGELRKLPVEWLQSGKYQPRKD 63
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ LE+L SI++ G+IQP++VR + ++IIAGERR+RA+++A L VP ++++V
Sbjct: 64 MSQDALEELANSIRAQGVIQPIVVRPLGEQSFEIIAGERRWRASQLARLEVVPCLVKDVP 123
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYE 145
+++++ IA++EN+QR+DLN +EEA+ +
Sbjct: 124 DEAAVAIALIENIQREDLNAIEEAVALQ 151
>gi|167957035|ref|ZP_02544109.1| ParBc, ParB-like nuclease domain [candidate division TM7
single-cell isolate TM7c]
Length = 239
Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 115/202 (56%), Gaps = 5/202 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSID-SPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
MS KR LGRG ++LI + P + I I + P+P PR F+
Sbjct: 1 MS--AKKRGLGRGFSSLIPDDILDESFDPTAIEDERISDLRQIKISQVFPDPDQPRRNFD 58
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
E L+ L SI HG++QP++V + Y I+AGERR+RAA +A L ++P ++R + ++
Sbjct: 59 QEALDRLAISIGEHGVLQPIVVIPRGDK-YMIVAGERRWRAANIAKLDKIPALVRTLSDQ 117
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSR-SHVANILRILKL 178
LE++++EN+QR DLNP+E A Y +L ++ + + I +G S V+N +R+LKL
Sbjct: 118 HKLELSLIENIQRSDLNPIETATAYLKLRDQFNLSLDVIAKRMGAKSVSTVSNKMRLLKL 177
Query: 179 PSSVREMIRKEEISLGHARTLV 200
P SV++ + +I G R L+
Sbjct: 178 PKSVQKKLASGDIKEGQIRPLI 199
>gi|208435035|ref|YP_002266701.1| plasmid replication-partition related protein [Helicobacter pylori
G27]
gi|208432964|gb|ACI27835.1| plasmid replication-partition related protein [Helicobacter pylori
G27]
Length = 290
Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 165/299 (55%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLTRDFKTNANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + E L + + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKQTQTLIAEDELERFNQSLWDRYKLKAALKGN----KIILRCYENSLLEAFMKKM 288
>gi|308062414|gb|ADO04302.1| plasmid replication-partition related protein [Helicobacter pylori
Cuz20]
Length = 290
Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 163/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIMGQKLSVRQTEDLARDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELERFNQSLWDHYKLKATLKGN----KIVLRCYENSLLEAFMKKM 288
>gi|312876176|ref|ZP_07736163.1| parB-like partition protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796991|gb|EFR13333.1| parB-like partition protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 285
Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 98/290 (33%), Positives = 158/290 (54%), Gaps = 11/290 (3%)
Query: 7 KRRLGRGLAALIGE---VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
K+RLGRGL AL G+ ++ E E + I I I + + PR F E +
Sbjct: 2 KKRLGRGLDALFGDDVISSEKEKEEVISEEENIERIEEIDIDLIDLSENQPRKIFNDEEI 61
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
E+L SIK G+IQPL+V+ + +IAGERR RA K+A + +V I++ +N +
Sbjct: 62 EELANSIKCVGLIQPLVVQKKGDKYV-LIAGERRLRACKLAGIQKVKCIVKEYENPLEIA 120
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ +EN+QRKDLNP E+AL +++L+ E+GYTQ ++ +G SRS VAN LRIL +
Sbjct: 121 L--IENIQRKDLNPYEKALAFKRLMDEFGYTQEELAKRLGISRSKVANTLRILNFGKKII 178
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
++I + +IS GHA+ L+S D ++ EL + +K++ E
Sbjct: 179 DLIIEGKISEGHAKVLLSVEDEEQRNKLAELVAEKNLSVRELESIIKSSDDKKEFEVESE 238
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+E + + GL + I+ + NKG+ I++ ++E+L+ I S+L
Sbjct: 239 IIREIE-----ENLMKLFGLKVKIQKKKNKGKIEIEFSSDEELEKIISIL 283
>gi|315639298|ref|ZP_07894460.1| chromosome partitioning protein SpoOJ [Campylobacter upsaliensis
JV21]
gi|315480624|gb|EFU71266.1| chromosome partitioning protein SpoOJ [Campylobacter upsaliensis
JV21]
Length = 279
Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 96/284 (33%), Positives = 163/284 (57%), Gaps = 14/284 (4%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
+GL+ LIG++++ K+ I + I NP+ PR +F+ E LE+L SIK
Sbjct: 7 KGLSKLIGDLDEVYS---KELGLDTNQVSEIPLAKIDLNPYQPRKHFDEEALEELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
+G+IQP+IV D ++AGERR RA+K+ L + + +V K E+A++EN+Q
Sbjct: 64 EYGLIQPIIVLKKDGRYI-LVAGERRLRASKILGLKSILAFVADVKEKRLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ LI E+ TQ ++ SI+ KSR+ + N LR+L L +++I + +I
Sbjct: 123 RENLNPIELAYSYKSLIEEHQITQENLASIIHKSRTQITNTLRLLNLEQRTQKLISEGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D ++ I+ +K+SVRDTE++VQ N K+ K + S E ++
Sbjct: 183 SQGHAKILVGLKKDDEKTMVDSIIGQKLSVRDTEKIVQNLKN---KKPKDEKFSFEFDED 239
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ ++K + ++ GL N + + I +++K + +L
Sbjct: 240 MQKIKKIL-NQYGLKCE----NKREKLTIYLTNKDKIKKLFEIL 278
>gi|188527921|ref|YP_001910608.1| plasmid replication-partition related protein [Helicobacter pylori
Shi470]
gi|188144161|gb|ACD48578.1| plasmid replication-partition related protein [Helicobacter pylori
Shi470]
Length = 290
Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 163/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLARDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELERFNQSLWDHYKLKATLKGN----KIVLRCYENSLLEAFMKKM 288
>gi|57504655|ref|ZP_00370733.1| chromosome partioning protein, ParB family [Campylobacter coli
RM2228]
gi|305432642|ref|ZP_07401803.1| chromosome partitioning protein SpoOJ [Campylobacter coli JV20]
gi|57019424|gb|EAL56119.1| chromosome partioning protein, ParB family [Campylobacter coli
RM2228]
gi|304444353|gb|EFM37005.1| chromosome partitioning protein SpoOJ [Campylobacter coli JV20]
Length = 278
Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 89/286 (31%), Positives = 146/286 (51%), Gaps = 17/286 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
RGL+ L+G+V + + I I PNP PR F+ L +L SIK
Sbjct: 7 RGLSTLMGDVGEVYSRE---LGLDKNQVSLVEISKITPNPFQPRKTFDEAALNELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
HG+IQP+IV N + ++AGERR RA ++ + + + D E+A++EN+Q
Sbjct: 64 EHGLIQPIIV-LKKNDSFILVAGERRLRATQILGKENILAFVSDSDESKLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ LI Y TQ ++ ++ KSR+ + N LR+L L +++I +I
Sbjct: 123 RENLNPIELANSYKDLIEVYNITQENLAELIHKSRTQITNTLRLLNLDPKTQDLIASGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D L I+ +K+SVRDTE LVQ+ N ++
Sbjct: 183 SQGHAKVLVGLDKEDEKVLVDSILGQKLSVRDTERLVQKVKN----------KENTEDVE 232
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + + + + +NNK + I+ + E++K + +L +
Sbjct: 233 FENSMQSLKQTLN-KLGFASKNNKKELIIRLDNIEKIKKLTEILNK 277
>gi|317014524|gb|ADU81960.1| plasmid replication-partition related protein [Helicobacter pylori
Gambia94/24]
Length = 290
Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 165/299 (55%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKIFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 RVQNALLEEKITSGHAKVLVGLEEEKQELILNSIIGQKLSVRQTEDLARDFKINANFDNK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + E L + + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKQTQTLIAEDELERFNQSLWDRYKLKAALKGN----KIVLRCYENSLLEAFMKKM 288
>gi|261839869|gb|ACX99634.1| chromosome partitioning protein [Helicobacter pylori 52]
Length = 290
Score = 94.0 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 163/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKIFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLARDFKINANCENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELERFNQSLWDHYKLKATLKGN----KIVLRCYENSLLEAFMKKM 288
>gi|317011336|gb|ADU85083.1| plasmid replication-partition related protein [Helicobacter pylori
SouthAfrica7]
Length = 290
Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 163/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERSNRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMQTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELAKSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLARDFKTNTNLENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + L ++K + ++ N L+ +
Sbjct: 234 KPNFKETQALITEDELKRFNQSLWDHYKLKAALKGN----KIVLRCYKNSLLEAFMKKM 288
>gi|217034721|ref|ZP_03440122.1| hypothetical protein HP9810_3g6 [Helicobacter pylori 98-10]
gi|216942804|gb|EEC22303.1| hypothetical protein HP9810_3g6 [Helicobacter pylori 98-10]
Length = 290
Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 98/299 (32%), Positives = 162/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLARDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + L ++K + ++ L+ +
Sbjct: 234 KHGFKETQTLIAEDELKRFNQNLWDHYKLKATLKGN----KIVLRCYEKSLLEAFMKKM 288
>gi|254696307|ref|ZP_05158135.1| chromosome partitioning protein PARB [Brucella abortus bv. 2 str.
86/8/59]
gi|260760678|ref|ZP_05873021.1| chromosome partitioning protein PARB [Brucella abortus bv. 2 str.
86/8/59]
gi|260671110|gb|EEX57931.1| chromosome partitioning protein PARB [Brucella abortus bv. 2 str.
86/8/59]
Length = 133
Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 64/136 (47%), Positives = 92/136 (67%), Gaps = 6/136 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+++ SK+RLGRGLAALIGE+ D P ++ + + I I + NP NPR F
Sbjct: 1 MNDDPSKKRLGRGLAALIGEI----DRPVEERKAPVPIERNIPIEFVTRNPRNPRRMFSE 56
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
LEDL QSIK HG++QP++VR +++IAGERR+ A++ A + +PVI+R+VD+
Sbjct: 57 TELEDLAQSIKEHGVVQPIVVRPAPGQPDRFELIAGERRWLASQRAGVDTIPVIVRDVDD 116
Query: 119 KSSLEIAIVENVQRKD 134
+ +LEIAI+ENVQR D
Sbjct: 117 RVALEIAIIENVQRAD 132
>gi|261838466|gb|ACX98232.1| plasmid replication-partition related protein [Helicobacter pylori
51]
gi|317177888|dbj|BAJ55677.1| plasmid replication-partition related protein [Helicobacter pylori
F16]
gi|317182391|dbj|BAJ60175.1| plasmid replication-partition related protein [Helicobacter pylori
F57]
gi|332673936|gb|AEE70753.1| stage 0 DNA-binding protein [Helicobacter pylori 83]
Length = 290
Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 163/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLARDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELKRFNQSLWDHYKLKATLKGD----KIVLRCYENSLLEAFMKKM 288
>gi|29839824|ref|NP_828930.1| ParB family chromosome partioning protein [Chlamydophila caviae
GPIC]
gi|29834171|gb|AAP04808.1| chromosome partioning protein, ParB family [Chlamydophila caviae
GPIC]
Length = 277
Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 152/270 (56%), Gaps = 10/270 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKI 91
++ +++ SI +P PR F L++L S++S G+I P +VR Y++
Sbjct: 7 KDTIIEVAVDSIRVSPFQPRRVFSEAELQELVASLQSVGLIHPPVVREIRSGDKVLYYEL 66
Query: 92 IAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
IAGERR+RA ++A + +PV+ + + + + E ++EN+QR +L+P+E A +++LI+
Sbjct: 67 IAGERRWRALQLAGYTTIPVVLKQVIADDIAAEATLIENIQRVNLSPMEMAEAFKKLINV 126
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL-- 208
+G TQ+ + VGK RS VAN LR+ L ++++ + EI+LGHA+ +++ DP
Sbjct: 127 FGLTQDKVALRVGKKRSTVANYLRLFSLSETIQKSLYLGEITLGHAKVILTLEDPKLREI 186
Query: 209 -AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK-YLTDLEKKISSKVGLNIS 266
A+ I+SK+++VR+ E+ ++ + + E + D+++++S +G ++
Sbjct: 187 LAERIISKRLAVREAEQEAKKLLSGESISLSSKEHVKTPSTVSYQDMQERLSQSLGYKVT 246
Query: 267 IKHRNNKGQFCIKYETNEQLKIICS-LLGE 295
+K + + + EQLK + LL +
Sbjct: 247 VKSQGSHHSVSLHVHDEEQLKQLEEWLLKK 276
>gi|330961494|gb|EGH61754.1| ParB family protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 210
Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 68/213 (31%), Positives = 137/213 (64%), Gaps = 7/213 (3%)
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
+ N ++IIAGERR+RA++ A + +P ++R+V +++++ +A++EN+QR+DLNP+EEA+
Sbjct: 1 MGNNRFEIIAGERRWRASQQAGVETIPAMVRDVPDETAIAMALIENIQREDLNPIEEAMA 60
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS-- 201
++L E+ TQ + VGKSR VAN+LR++ LP ++ M+ ++ +GHAR L+
Sbjct: 61 LQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPEVIKTMLSHGDLEMGHARALLGLG 120
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
+ A+ +V++ ++VR TE LV++ + K + + + + ++ LE++++ ++
Sbjct: 121 EDRQVEGARHVVARGLTVRQTEALVRQWLSGKPEAAEPAKA----DPDISRLEQRLAERL 176
Query: 262 GLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 177 GSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 209
>gi|308063923|gb|ADO05810.1| plasmid replication-partition related protein [Helicobacter pylori
Sat464]
Length = 290
Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 163/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLTRDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELERFNQSLWDHYKLKATLKGN----KIVLRCYENSLLEAFMKKM 288
>gi|210135297|ref|YP_002301736.1| chromosome partitioning protein [Helicobacter pylori P12]
gi|210133265|gb|ACJ08256.1| chromosome partitioning protein [Helicobacter pylori P12]
Length = 290
Score = 93.6 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 100/299 (33%), Positives = 166/299 (55%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+LV++ K
Sbjct: 174 NVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLVRDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELERFNQSLWNHYKLKAALKGN----KIILRCYENSLLEAFMKKM 288
>gi|146297749|ref|YP_001181520.1| parB-like partition protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145411325|gb|ABP68329.1| chromosome segregation DNA-binding protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 283
Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 98/258 (37%), Positives = 149/258 (57%), Gaps = 9/258 (3%)
Query: 7 KRRLGRGLAALIGE-VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
K+RLG+GL AL + V +S + T E + I I I+ + PR F+ +E+
Sbjct: 2 KKRLGKGLDALFDDRVQNFDESIDDIQATNDERIEEIEIDKILTSNEQPRKIFDDNEIEE 61
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
L QSIK+ G+IQPL+VR + +IAGERR RA K+A L +VP I+RN N + E+A
Sbjct: 62 LAQSIKNVGLIQPLVVRREGDKYV-LIAGERRLRACKIAGLQKVPCIVRNYTNPT--EVA 118
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QRKDLNP EEAL Y++LI E+GYTQ ++ +G SRS +AN LRIL + ++ +M
Sbjct: 119 LIENIQRKDLNPYEEALAYKKLIDEHGYTQEELAKRIGISRSKIANTLRILNIGQNILQM 178
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
I + +IS GHA+ L+S + + ++L + + K K +
Sbjct: 179 IIEGKISEGHAKVLLSVENDTE-----RENLAKLVVEKDLSVRELEEIVKAKDKQKKDEV 233
Query: 246 KEKYLTDLEKKISSKVGL 263
+ + L +LE+ + GL
Sbjct: 234 ENEVLKELEENLMKLFGL 251
>gi|218134361|ref|ZP_03463165.1| hypothetical protein BACPEC_02255 [Bacteroides pectinophilus ATCC
43243]
gi|217989746|gb|EEC55757.1| hypothetical protein BACPEC_02255 [Bacteroides pectinophilus ATCC
43243]
Length = 310
Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 99/261 (37%), Positives = 151/261 (57%), Gaps = 5/261 (1%)
Query: 16 ALIG----EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
ALI + N+ + E E + + I I PN PR F+ + L +L +SIK
Sbjct: 51 ALIAEDVEDKNEKVVVKEVIKEVKVPADTKLRISEIEPNREQPRKAFDEDALIELAESIK 110
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
+GI+QPL+V+ D G Y+IIAGERR+RAAK+A + EVPVII++ ++ +EIA++EN+Q
Sbjct: 111 QYGILQPLLVQKKD-GYYEIIAGERRWRAAKIAGVKEVPVIIKDYSSQEVMEIALIENIQ 169
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R+DLNP+EEA Y+ LI+EY Q+D+ V KSR+ +AN +R+LKL V++M+ I
Sbjct: 170 REDLNPIEEAKAYQHLINEYKLKQDDVAERVSKSRAAIANSMRLLKLDERVQQMVMDNMI 229
Query: 192 SLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
S GHAR L++ SD + E + +K++ E +E
Sbjct: 230 SNGHARALLAISDGDKQYMIAQQIFDEKLSVRETEKLMKLLDKKKEAPKEKDVARELIYH 289
Query: 252 DLEKKISSKVGLNISIKHRNN 272
+LE+K+ S +G +SI +R
Sbjct: 290 ELEEKVKSVLGTKVSIHNRKK 310
>gi|308183242|ref|YP_003927369.1| plasmid replication-partition related protein [Helicobacter pylori
PeCan4]
gi|308065427|gb|ADO07319.1| plasmid replication-partition related protein [Helicobacter pylori
PeCan4]
Length = 290
Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 101/299 (33%), Positives = 167/299 (55%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQD-NKKEKRK 237
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ N + K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLARDFKINANFENK 233
Query: 238 KIFEGSREKEKYLTDLE---KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
K + +LE + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELECFNQSLWDHYKLKATLKGN----KIVLRCYENSLLEAFMKKM 288
>gi|308184878|ref|YP_003929011.1| plasmid replication-partition related protein [Helicobacter pylori
SJM180]
gi|308060798|gb|ADO02694.1| plasmid replication-partition related protein [Helicobacter pylori
SJM180]
Length = 290
Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 165/299 (55%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKIFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLTRDFKINANFDNK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + E L + + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKQTQTLIAEDELERFNQSLWDRYKLKAALKGN----KIVLRCYENSLLEAFMKKM 288
>gi|315587026|gb|ADU41407.1| stage 0 DNA-binding protein [Helicobacter pylori 35A]
Length = 290
Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 98/299 (32%), Positives = 161/299 (53%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L + K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLAHDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + L ++K + ++ L+ +
Sbjct: 234 KHGFKETQTLIAEDKLERFNQSLWDHYKLKATLKGN----KIVLRCYEKSLLEAFMKKM 288
>gi|229087966|ref|ZP_04220074.1| Stage 0 sporulation protein J [Bacillus cereus Rock3-44]
gi|228695351|gb|EEL48228.1| Stage 0 sporulation protein J [Bacillus cereus Rock3-44]
Length = 233
Score = 93.2 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 144/236 (61%), Gaps = 7/236 (2%)
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
+ SIK HGI+QPLIVR Y+I+AGERR+RAAK A L +VP ++R+++ + +E A
Sbjct: 1 MAASIKEHGILQPLIVRK-SIKGYEIVAGERRYRAAKEACLEKVPAVVRDLNEQQMMEFA 59
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DLNP+EEAL Y+ L+ E TQ + +GKSR ++AN +R+L LPS V+EM
Sbjct: 60 LLENLQREDLNPMEEALAYQMLMDELNVTQEQLAKRLGKSRPYIANYVRLLTLPSFVQEM 119
Query: 186 IRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
I ++S+ H RTL++ D L + I + ++VR E++VQ+ + + + K +
Sbjct: 120 IADGKLSMAHGRTLLTIKDEEQLKLLLKRIEKEGLNVRQLEQIVQQMNQRVSRETK--KV 177
Query: 243 SREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFCIKYETNEQLKIICSLLGEND 297
RE+ + + E + K G + IK + KG+ I++ E L I LL +
Sbjct: 178 KRERNIFFEERETLLREKFGTGVKIKGTKKEKGKIEIEFFDKEDLNRILELLSGEN 233
>gi|62184704|ref|YP_219489.1| putative chromosome partitioning protein [Chlamydophila abortus
S26/3]
gi|62147771|emb|CAH63515.1| putative chromosome partitioning protein [Chlamydophila abortus
S26/3]
Length = 279
Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 81/273 (29%), Positives = 159/273 (58%), Gaps = 12/273 (4%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG----LYKI 91
++ ++I +I +P PR F L++L S+KS G+I P +VR I +G Y++
Sbjct: 7 KDTIIEVAIDNIRVSPFQPRRVFSESELQELVASLKSVGLIHPPVVREIRSGDRVLYYEL 66
Query: 92 IAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
IAGERR+RA ++A + +PV+ + V + + E ++EN+QR +L+P+E A +++LI+
Sbjct: 67 IAGERRWRALQLAGYTTIPVVLKQVVADDIAAEATLIENIQRVNLSPMEMAEAFKKLINV 126
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL-- 208
+G TQ+ + VGK RS VAN LR+ L S+++ + EI+LGHA+ +++ DP
Sbjct: 127 FGLTQDKVAVRVGKKRSTVANYLRLFSLSESIQKSLYLGEITLGHAKVILTLEDPNLREI 186
Query: 209 -AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE---GSREKEKYLTDLEKKISSKVGLN 264
A+ I+S++++VR+ E+ ++ + + + + + + +++K++S +G
Sbjct: 187 LAEKIISQRLAVREAEQEAKKLLSGEVLTTRAAKEQVKACATSPHCHEMQKRLSQSLGYK 246
Query: 265 ISIKHRNNKGQFCIKYETNEQLKIICS-LLGEN 296
+++K + + + + EQLK + LL ++
Sbjct: 247 VTVKPQGSHYSVSLHVQDEEQLKQLEEWLLKKS 279
>gi|148653198|ref|YP_001280291.1| parB-like partition protein [Psychrobacter sp. PRwf-1]
gi|148572282|gb|ABQ94341.1| chromosome segregation DNA-binding protein [Psychrobacter sp.
PRwf-1]
Length = 362
Score = 92.8 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 89/367 (24%), Positives = 166/367 (45%), Gaps = 79/367 (21%)
Query: 1 MSNNYSKRRL--GRGLAALIG---------------EVNQSIDSPEKKTETIPE------ 37
M+ KR L RGL AL+G + ++ E +T P
Sbjct: 1 MA---KKRGLAANRGLDALLGSIKKEKAITAAALRDDRQVEREAKEALAQTAPSAEKSVA 57
Query: 38 ---------------------------------------SQDCISIHSIVPNPHNPRNYF 58
+ +++ + + PR
Sbjct: 58 SLGADGAKKAAPKKKIAGPKAAAVSPKSEVLPSDAEEEMTLVQMAVERLQAGKYQPRRDM 117
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRA--------IDNGLYKIIAGERRFRAAKMASLSEVP 110
L +L SIK HG++QP+++R D+ ++IIAGERR+RAAKMA +P
Sbjct: 118 SETALSELASSIKQHGVMQPIVIRPLLATEEKVSDSITHEIIAGERRWRAAKMAGQPTIP 177
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
I R + ++ ++ +A++EN+QR+DL+ +E+A ++ +E+G + I +VGK+R+ V+
Sbjct: 178 AIERALSDELAIALALIENIQREDLSVIEQAAALQRFHTEFGMSHAMIADVVGKARTTVS 237
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
N+LR+ L V+ + + + +GHAR L +S+ +A+ I+ M+VRD E+LV
Sbjct: 238 NLLRLNHLHEEVKTHLSEGHLDMGHARALLSLSSEQQPIIAERIIESSMTVRDAEKLV-- 295
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI-SIKHRNNKGQFCIKYETNEQLK 287
+ K + E + + L +++S +G + + + KG I ++++E+L+
Sbjct: 296 -KSILNPEKSSKPATLEADAEVEKLSQQLSDYLGATVKLKQKKGGKGSMEIFFQSHEELE 354
Query: 288 IICSLLG 294
+
Sbjct: 355 SLLQHFK 361
>gi|317178560|dbj|BAJ56348.1| plasmid replication-partition related protein [Helicobacter pylori
F30]
Length = 290
Score = 92.8 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EHGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLARDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELKRFNQSLWDHYKLKATLKGD----KIVLRCYENSLLEAFMKKM 288
>gi|152993360|ref|YP_001359081.1| chromosome partitioning protein ParB [Sulfurovum sp. NBC37-1]
gi|151425221|dbj|BAF72724.1| chromosome partitioning protein ParB [Sulfurovum sp. NBC37-1]
Length = 290
Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 88/298 (29%), Positives = 152/298 (51%), Gaps = 19/298 (6%)
Query: 9 RLGRGLAALIGEVNQSIDSPE------KKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
LGRGL ++ EV ++ + + + E + + + SI NP PR +F+
Sbjct: 2 ALGRGLGEILSEVEEAYEKEDLSSIDSSELEAQGARVEELPVKSISANPFQPRKHFDESA 61
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVII--RNVDNKS 120
L++L QSIK HG++QP++V +NG +IAGERR RA K+A ++ + II +D
Sbjct: 62 LKELSQSIKEHGLLQPVVVIEKENGFL-LIAGERRLRAHKLAKITTIKAIIANVEIDEAR 120
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR++LN +E A Y +LI + T +++ +IV KSRS + N +R+L L
Sbjct: 121 LRELALIENIQRENLNAIELANSYAELIEVHKITHDELSTIVHKSRSQITNTMRLLSLSP 180
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ + +IS GHA+ LV + I+ +K+SVRD E++V+
Sbjct: 181 YAQKKVASGKISQGHAKVLVGLDEKQQKIIIDSIIGQKLSVRDAEKMVKSYKKGDAAPTV 240
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
S+ EK+ +K + I K I + + ++ + L ++
Sbjct: 241 KASASKLLEKHKKAFKKLL--PFEYKIKAK------SIEISFSNEKDIENFLTFLKKD 290
>gi|325663370|ref|ZP_08151820.1| hypothetical protein HMPREF0490_02561 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470824|gb|EGC74054.1| hypothetical protein HMPREF0490_02561 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 263
Score = 92.8 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 143/239 (59%), Gaps = 16/239 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPE----------KKTETIPESQDCISIHSIVPN 50
M+ + LG+GL +LI + ++ + +KT + + I + PN
Sbjct: 1 MA--VKRGGLGKGLDSLIPDHKPKANTSKDKVSEQASGKEKTTMPASGEQKVKITKVEPN 58
Query: 51 PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
PR F+ + L +L SI+ G++QPL+V+ Y+IIAGERR+RAAKMA L E+P
Sbjct: 59 RTQPRKNFDEDSLIELADSIRQFGVLQPLLVQKKG-DYYEIIAGERRWRAAKMAGLKEIP 117
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
VIIR ++ +EIA++EN+QR++LNP+EEA +++L+ E+ Q+++ V KSR+ V
Sbjct: 118 VIIREYSHQEMVEIALIENIQRENLNPIEEAQAFKRLLEEFQLKQDEVAERVSKSRTAVT 177
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELV 226
N +R+LKL V++MI + IS GHAR L+ LA I +K+SVR+TE+LV
Sbjct: 178 NSMRLLKLDEKVQQMIIDDMISTGHARALLAIEDKEQQYILANKIFDEKLSVRETEKLV 236
>gi|109947163|ref|YP_664391.1| chromosome partitioning protein parB [Helicobacter acinonychis str.
Sheeba]
gi|109714384|emb|CAJ99392.1| chromosome partitioning protein parB [Helicobacter acinonychis str.
Sheeba]
Length = 289
Score = 92.4 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 100/298 (33%), Positives = 164/298 (55%), Gaps = 16/298 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVIELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMQTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELAKSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ KK
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEKKQELILNSIIGQKLSVRQTEDLARDLKTTPHGDKK 233
Query: 239 IFEGSREK---EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ + L + + L ++K + ++ N LK +
Sbjct: 234 HGLKRTQTLIAKDELKRFNQNLWDHYKLKAALKGD----KIVLQCYENSLLKAFIKKI 287
>gi|110004188|emb|CAK98526.1| probable spoj partition protein parb c-terminal truncated
[Spiroplasma citri]
Length = 197
Score = 92.4 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 76/198 (38%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++N R +GL + GE + + + + E+ + I++ I PNPH PR F
Sbjct: 1 MASNTKSRLSSKGLDKIFGEGINEVIKGIESNDALKETANEIALAEIFPNPHQPRKNFNE 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L +L QSIK +G+IQP+IV+ +NG Y ++AGERR RAAK+A L+ +P I+ + +++
Sbjct: 61 EELTELAQSIKEYGLIQPIIVKKTNNG-YYLVAGERRSRAAKLAGLTTIPAIVADFNDQQ 119
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR DLN +EEA Y++LI TQ ++ +GKSRSHV N +R+L LP+
Sbjct: 120 MKEVALIENIQRVDLNSIEEANAYKELIELLRLTQEELAQRIGKSRSHVTNTMRLLNLPT 179
Query: 181 SVREMIRKEEISLGHART 198
V+ ++ + ++
Sbjct: 180 EVQTLLLENKVQWAKLNH 197
>gi|317009750|gb|ADU80330.1| plasmid replication-partition related protein [Helicobacter pylori
India7]
Length = 290
Score = 92.0 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 17/299 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKIFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDEEKQELILNSIIGQKLSVRQTEDLTRDFKINANFENK 233
Query: 239 IFEGSREK----EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E L + + + L ++K + ++ N L+ +
Sbjct: 234 KHGFKETQTLIAEDELERFNQSLWDRYKLKAALKGN----KIILRCYENSLLEAFMKKM 288
>gi|86154029|ref|ZP_01072230.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|121612620|ref|YP_999825.1| ParB family chromosome partitioning protein [Campylobacter jejuni
subsp. jejuni 81-176]
gi|167004797|ref|ZP_02270555.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni 81-176]
gi|85842443|gb|EAQ59657.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|87249033|gb|EAQ71995.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni 81-176]
Length = 278
Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 93/286 (32%), Positives = 156/286 (54%), Gaps = 17/286 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
RGL++LI +++ K+ I I I PNP PR F+ E L++L SIK
Sbjct: 7 RGLSSLISDMDTVYS---KELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+IQP+IV N + +IAGERR RA K E+ I ++D E+A++EN+Q
Sbjct: 64 EFGLIQPIIVFK-KNNKFILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ L+ + TQ ++ ++ KSR+ + N LR+L L +E+I +I
Sbjct: 123 RENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D L I+ +K++VRDTE++V++ N + ++E E
Sbjct: 183 SQGHAKVLVGLGQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESL------PNQEFEDE 236
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L++ + ++ G + K+ + F I E +++K + +L +
Sbjct: 237 IKKLKQIL-NRFGFDCKNKNND----FVIHLENIDKIKKLIKMLEK 277
>gi|86149697|ref|ZP_01067927.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|88597696|ref|ZP_01100929.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni 84-25]
gi|157414414|ref|YP_001481670.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni 81116]
gi|218561782|ref|YP_002343561.1| parB family protein [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|12230471|sp|Q9PJ25|PARB_CAMJE RecName: Full=Probable chromosome-partitioning protein parB
gi|85839965|gb|EAQ57224.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|88190000|gb|EAQ93976.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni 84-25]
gi|112359488|emb|CAL34272.1| parB family protein [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|157385378|gb|ABV51693.1| parB family protein [Campylobacter jejuni subsp. jejuni 81116]
gi|315926961|gb|EFV06323.1| parB-like partition proteins domain protein [Campylobacter jejuni
subsp. jejuni DFVF1099]
gi|315928857|gb|EFV08120.1| parB-like partition proteins domain protein [Campylobacter jejuni
subsp. jejuni 305]
gi|315931495|gb|EFV10462.1| parB-like partition proteins domain protein [Campylobacter jejuni
subsp. jejuni 327]
Length = 278
Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 93/286 (32%), Positives = 156/286 (54%), Gaps = 17/286 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
RGL++LI +++ K+ I I I PNP PR F+ E L++L SIK
Sbjct: 7 RGLSSLISDMDTVYS---KELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+IQP+IV N + +IAGERR RA K E+ I ++D E+A++EN+Q
Sbjct: 64 EFGLIQPIIVFK-KNNKFILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ L+ + TQ ++ ++ KSR+ + N LR+L L +E+I +I
Sbjct: 123 RENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D L I+ +K++VRDTE++V++ N + ++E E
Sbjct: 183 SQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESL------PNQEFEDE 236
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L++ + ++ G + K+ + F I E +++K + +L +
Sbjct: 237 IKKLKQIL-NRFGFDCKNKNND----FVIHLENIDKIKKLIKMLEK 277
>gi|283955545|ref|ZP_06373040.1| parB family protein [Campylobacter jejuni subsp. jejuni 1336]
gi|283793006|gb|EFC31780.1| parB family protein [Campylobacter jejuni subsp. jejuni 1336]
Length = 278
Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 93/286 (32%), Positives = 156/286 (54%), Gaps = 17/286 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
+GL++LI +++ K+ I I I PNP PR F+ E L++L SIK
Sbjct: 7 KGLSSLISDMDTVYS---KELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+IQP+IV N + +IAGERR RA K E+ I ++D E+A++EN+Q
Sbjct: 64 EFGLIQPIIVFK-KNNKFILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ L+ + TQ ++ ++ KSR+ + N LR+L L +E+I +I
Sbjct: 123 RENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D L I+ +K++VRDTE++V++ N + ++E E
Sbjct: 183 SQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESL------PNQEFEDE 236
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L++ + ++ G N K+ + F I E +++K + +L +
Sbjct: 237 IKKLKQIL-NRFGFNCKNKNND----FVIHLENIDKIKKLIKMLEK 277
>gi|148926901|ref|ZP_01810579.1| parB family protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|145844478|gb|EDK21586.1| parB family protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|284925394|gb|ADC27746.1| ParB family chromosome partitioning protein [Campylobacter jejuni
subsp. jejuni IA3902]
Length = 278
Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 93/286 (32%), Positives = 156/286 (54%), Gaps = 17/286 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
RGL++LI +++ K+ I I I PNP PR F+ E L++L SIK
Sbjct: 7 RGLSSLISDMDTVYS---KELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+IQP+IV N + +IAGERR RA K E+ I ++D E+A++EN+Q
Sbjct: 64 EFGLIQPIIVFK-KNNKFILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ L+ + TQ ++ ++ KSR+ + N LR+L L +E+I +I
Sbjct: 123 RENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D L I+ +K++VRDTE++V++ N + ++E E
Sbjct: 183 SQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESL------PNQEFEDE 236
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L++ + ++ G + K+ + F I E +++K + +L +
Sbjct: 237 IKKLKQIL-NRFGFDCKNKNND----FVIHLENIDKIKKLIKMLEK 277
>gi|307747058|gb|ADN90328.1| Probable chromosome-partitioning protein parB [Campylobacter jejuni
subsp. jejuni M1]
Length = 278
Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 93/286 (32%), Positives = 157/286 (54%), Gaps = 17/286 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
RGL++LI +++ + K+ I I I PNP PR F+ E L++L SIK
Sbjct: 7 RGLSSLISDMDTVYN---KELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+IQP+IV N + +IAGERR RA K E+ I ++D E+A++EN+Q
Sbjct: 64 EFGLIQPIIVFK-KNNKFILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ L+ + TQ ++ ++ KSR+ + N LR+L L +E+I +I
Sbjct: 123 RENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D L I+ +K++VRDTE++V++ N + ++E E
Sbjct: 183 SQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESL------PNQEFEDE 236
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L++ + ++ G + K+ + F I E +++K + +L +
Sbjct: 237 IKKLKQIL-NRFGFDCKNKNND----FVIHLENIDKIKKLIKMLEK 277
>gi|315057541|gb|ADT71870.1| Chromosome (plasmid) partitioning protein ParB [Campylobacter
jejuni subsp. jejuni S3]
Length = 278
Score = 91.3 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 93/286 (32%), Positives = 156/286 (54%), Gaps = 17/286 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
RGL++LI +++ K+ I I I PNP PR F+ E L++L SIK
Sbjct: 7 RGLSSLISDMDTVYS---KELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+IQP+IV N + +IAGERR RA K E+ I ++D E+A++EN+Q
Sbjct: 64 EFGLIQPIIVFK-KNNKFILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ L+ + TQ ++ ++ KSR+ + N LR+L L +E+I +I
Sbjct: 123 RENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D L I+ +K++VRDTE++V++ N + ++E E
Sbjct: 183 SQGHAKILVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESL------PNQEFEDE 236
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L++ + ++ G + K+ + F I E +++K + +L +
Sbjct: 237 IKKLKQIL-NRFGFDCKNKNND----FVIHLENIDKIKKLIKMLEK 277
>gi|306819995|ref|ZP_07453645.1| chromosome partitioning protein SpoOJ [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551943|gb|EFM39884.1| chromosome partitioning protein SpoOJ [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 268
Score = 91.3 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 70/256 (27%), Positives = 134/256 (52%), Gaps = 7/256 (2%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ + I + PR FE ++DL +SIK +G++QP++V+ + + I AGERR+
Sbjct: 15 ITRLKLSEITADSSQPRKIFEETQIDDLAESIKRYGLLQPILVKKVGDKYVII-AGERRY 73
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA + L V VII D+++++ I+++EN+QR++L LEEA+ + + +Y T D+
Sbjct: 74 RACRKLGLEYVEVII--KDDENAMLISLIENIQRENLTALEEAIAIQNIKDKYKCTHEDL 131
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMS 218
++GK+R ++ N LRIL ++++ IS GHAR L+ D ++ +
Sbjct: 132 SKLLGKTRVYITNKLRILNADDYTKKLLSDNNISEGHARALLGQRDVKKRQELA---RKI 188
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH-RNNKGQFC 277
+ + Q + + + + + + ++ +L + + K+ ISI N G
Sbjct: 189 LSKGLSVRQVEKSIRYENEAFQSKEHQNDENYEELIEMLEEKLCTKISISSEENESGSIV 248
Query: 278 IKYETNEQLKIICSLL 293
I + + EQL+ I ++
Sbjct: 249 IDFYSKEQLEAIVDMI 264
>gi|239828704|ref|YP_002951328.1| parB-like partition protein [Geobacillus sp. WCH70]
gi|259512070|sp|C5D9Y4|NOC_GEOSW RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|239808997|gb|ACS26062.1| parB-like partition protein [Geobacillus sp. WCH70]
Length = 281
Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 134/231 (58%), Gaps = 3/231 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ E + E I + IVPN PR F+ E +E+L +I +HGIIQP++VR
Sbjct: 13 EKEQEETMEKQEKEEVRKIPVSKIVPNRFQPRTIFDEEKIEELALTIHTHGIIQPIVVRE 72
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
++G ++IIAGERR+RA + SE+P II+N+++K + +A++EN+QR++L P+EEA+
Sbjct: 73 CEDGKFEIIAGERRWRAVQKLGWSEIPAIIKNLNDKETASVALIENLQREELTPIEEAMA 132
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS 203
Y +L+ + TQ + +GK +S +AN LR+LKLP V+E + I+ HAR L+
Sbjct: 133 YAKLLELHNLTQEALAQRLGKGQSTIANKLRLLKLPQEVQEALLHRTITERHARALIVLK 192
Query: 204 DPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
D Q I+ K+++V+ TE+ V + + K + K+ +
Sbjct: 193 DKEKQLKLLQEIIDKQLNVKQTEDRVLKMLEAANPKPKPKRKAFSKDMRIA 243
>gi|283955267|ref|ZP_06372767.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni 414]
gi|283793181|gb|EFC31950.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni 414]
Length = 278
Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 93/286 (32%), Positives = 156/286 (54%), Gaps = 17/286 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
RGL++LI +++ K+ I I I PNP PR F+ E L++L SIK
Sbjct: 7 RGLSSLISDMDTIYS---KELGFDKNQSTMIEIDKISPNPFQPRKNFDQEALDELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+IQP+IV N + ++AGERR RA K E+ I ++D E+A++EN+Q
Sbjct: 64 EFGLIQPIIVFK-KNDKFILVAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ L+ Y TQ ++ ++ KSR+ + N LR+L L +E+I +I
Sbjct: 123 RENLNPIELANSYKDLMQVYKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D L I+ +K++VRDTE++V++ N + ++E E
Sbjct: 183 SQGHAKVLVGLDQKDERMLVDSIIGQKLNVRDTEKIVKKIKNNENL------SNQEFEDE 236
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L++ + + +G + K+ + F I E +++K + +L +
Sbjct: 237 IKKLKQIL-NHLGFDCKNKNND----FVIHLENIDKIKKLIKMLEK 277
>gi|153952129|ref|YP_001397355.1| ParB family chromosome partitioning protein [Campylobacter jejuni
subsp. doylei 269.97]
gi|152939575|gb|ABS44316.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. doylei 269.97]
Length = 278
Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 92/286 (32%), Positives = 156/286 (54%), Gaps = 17/286 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
RGL++LI +++ K+ I I I PNP PR F+ E L++L SIK
Sbjct: 7 RGLSSLISDMDTVYS---KELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+IQP+IV N + +IAGERR RA K E+ I ++D E+A++EN+Q
Sbjct: 64 EFGLIQPIIVFK-KNNKFILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ L+ + TQ ++ ++ KSR+ + N LR+L L +E+I +I
Sbjct: 123 RENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D L I+ +K++VRDTE++V++ N + ++E E
Sbjct: 183 SQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESL------PNQEFEDE 236
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L++ + ++ G + ++ + F I E +++K + +L +
Sbjct: 237 IKKLKQIL-NRFGFDCKNRNND----FVIHLENIDKIKKLIKMLEK 277
>gi|57237108|ref|YP_178120.1| ParB family chromosome partitioning protein [Campylobacter jejuni
RM1221]
gi|57165912|gb|AAW34691.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
RM1221]
Length = 278
Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 93/286 (32%), Positives = 156/286 (54%), Gaps = 17/286 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
RGL++LI +++ K+ I I I PNP PR F+ E L++L SIK
Sbjct: 7 RGLSSLISDMDTVYS---KELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+IQP+IV N + +IAGERR RA K E+ I ++D E+A++EN+Q
Sbjct: 64 EFGLIQPIIVFK-KNNKFILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ L+ + TQ ++ ++ KSR+ + N LR+L L +E+I +I
Sbjct: 123 RENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D L I+ +K++VRDTE++V++ N + ++E E
Sbjct: 183 SQGHAKILVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESL------SNQEFEDE 236
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L++ + ++ G + K+ + F I E +++K + +L +
Sbjct: 237 IKKLKQIL-NRFGFDCKNKNND----FVIHLENIDKIKKLIKMLEK 277
>gi|239946972|ref|ZP_04698725.1| chromosome partitioning protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921248|gb|EER21272.1| chromosome partitioning protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 286
Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 95/305 (31%), Positives = 159/305 (52%), Gaps = 56/305 (18%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGL++L+GE SI+S + I + PN + PR FE
Sbjct: 1 MAKN---KGLGRGLSSLLGEEVISIESEIIQIINIDKI---------RPNENQPRKNFEY 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +++L SI ++G++QP+IV + ++IIAGERR+RA K+A + E+PVII+N+D +
Sbjct: 49 DKIKELADSILNNGLLQPIIV----DNNFQIIAGERRWRACKLAKVLEIPVIIKNLDARE 104
Query: 121 SLEIAIVENVQR----------------KDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
S+EIA++EN+QR ++ N E L +GK
Sbjct: 105 SMEIALIENIQRADLTVMEEARGFKYLVENFNYTAEKLA----------------ERLGK 148
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
SRSH+AN+LR+ LP S+++ + + +S+G AR L++ +A I++ ++VR TEE
Sbjct: 149 SRSHIANLLRLNNLPQSIQDKVNENILSMGQARCLINHEHAEVIADHIINNDLNVRQTEE 208
Query: 225 LVQEQDNKKEKRKKIFEGSREK--------EKYLTDLEKKISSKVGLNISIKHRNNKGQF 276
LV++ + + K + L L K +S K G+ I+I++ G+
Sbjct: 209 LVRQWYKNEYTKSPNNNNKVGKRFLKDNATDNDLELLVKALSEKFGIKITIENYPLGGKL 268
Query: 277 CIKYE 281
Y+
Sbjct: 269 IFHYK 273
>gi|86151251|ref|ZP_01069466.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni 260.94]
gi|315123703|ref|YP_004065707.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|85841598|gb|EAQ58845.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni 260.94]
gi|315017425|gb|ADT65518.1| chromosome partitioning protein, ParB family [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
Length = 278
Score = 90.5 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 92/286 (32%), Positives = 156/286 (54%), Gaps = 17/286 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
+GL++LI +++ K+ I I I PNP PR F+ E L++L SIK
Sbjct: 7 KGLSSLISDMDTVYS---KELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIK 63
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+IQP+IV N + +IAGERR RA K E+ I ++D E+A++EN+Q
Sbjct: 64 EFGLIQPIIVFK-KNNKFILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQ 122
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R++LNP+E A Y+ L+ + TQ ++ ++ KSR+ + N LR+L L +E+I +I
Sbjct: 123 RENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASGKI 182
Query: 192 SLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S GHA+ LV D L I+ +K++VRDTE++V++ N + ++E E
Sbjct: 183 SQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESL------PNQEFEDE 236
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L++ + ++ G + K+ + F I E +++K + +L +
Sbjct: 237 IKKLKQIL-NRFGFDCKNKNND----FVIHLENIDKIKKLIKMLEK 277
>gi|255029511|ref|ZP_05301462.1| partition protein ParB homolg [Listeria monocytogenes LO28]
Length = 237
Score = 90.1 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 82/247 (33%), Positives = 135/247 (54%), Gaps = 12/247 (4%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
+ LG+G+ AL +T E+ I+I I PNP+ PR F+++ + +L
Sbjct: 3 KGLGKGINALF-----------NNVDTNEETVQNIAIKEIKPNPYQPRKIFDAKAINELR 51
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
SIK HG++QP+I+R D G Y+I+ GERR+RAAK A L E+P ++R++ + +E++++
Sbjct: 52 DSIKIHGVLQPIILRNTDKG-YEIVVGERRYRAAKEAKLKEIPAVVRDLTEEEMMELSVI 110
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ + TQ + VGKSR ++AN +R+L LP V+ M+R
Sbjct: 111 ENLQREDLSPLEEAESYQFLMKKLSLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLR 170
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+S GH R L+ ++ +L +N E +
Sbjct: 171 DGSLSAGHGRVLLGLKLKKNIIPTAKKAVAQGLTVRQLEDVVNNLNENVSRETIKPARVP 230
Query: 248 KYLTDLE 254
++ + E
Sbjct: 231 IFIRESE 237
>gi|330444080|ref|YP_004377066.1| ParB family chromosome partioning protein [Chlamydophila pecorum
E58]
gi|328807190|gb|AEB41363.1| chromosome partioning protein, ParB family [Chlamydophila pecorum
E58]
Length = 292
Score = 90.1 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 88/288 (30%), Positives = 160/288 (55%), Gaps = 14/288 (4%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-- 84
S ++ T ++ I+I +I +P PR F +E L++L S+KS G+I P +VR I
Sbjct: 2 SVDEVASTEKDTIIEIAIDAIRVSPFQPRRVFSNEELDELIASLKSVGLIHPPVVREIRN 61
Query: 85 --DNGLYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
Y++IAGERR+RA + A + +PV+ R + + + E ++EN+QR +LNPLE A
Sbjct: 62 GEHVLYYELIAGERRWRAMQKAGYAVIPVVLKRMMADDVAAEATLIENIQRVNLNPLEMA 121
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+++LI +G TQ+ + S VGK RS VAN LR+L L ++++ I E++LGHA+ +++
Sbjct: 122 EAFKKLIHVFGLTQDKVASKVGKKRSTVANYLRLLTLSETIQKSISLGEVTLGHAKVILT 181
Query: 202 TSDP---LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY------LTD 252
DP L I+ + ++VR+ E L + + K++ + +G +EK Y +
Sbjct: 182 LEDPALREQLNAEIIKEGLAVREAELLAKSLMQQHGKQELVTKGPKEKTSYPHPKEKYAE 241
Query: 253 LEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFEY 300
++K++S++ G + ++ E+L+ + L ++ +
Sbjct: 242 VQKRLSNECGYKVKVQPSGEDICVSFYLHNAEELETLQERLLKDSPSF 289
>gi|315637625|ref|ZP_07892831.1| stage 0 sporulation protein J [Arcobacter butzleri JV22]
gi|315478079|gb|EFU68806.1| stage 0 sporulation protein J [Arcobacter butzleri JV22]
Length = 284
Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 89/264 (33%), Positives = 154/264 (58%), Gaps = 8/264 (3%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
E T + I++ I NP+ PR F+ E L++L +SIK HG++QP++V D+G
Sbjct: 19 ENSTGNVKSGIRKINVSLIKANPNQPRKIFDEEKLQELSESIKEHGLLQPIVVVENDDGT 78
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
+ +IAGERR RA K+A + E+ +I + + E+A++EN+QR DLN +E A Y QL+
Sbjct: 79 FTLIAGERRLRAHKLAQIEEIKAVIVDAEELKLRELALIENIQRDDLNVIELAFCYAQLL 138
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPL 206
+E+ T ++ V KSR+ + N LR+L+L S V++ + ++IS GHA+ + + +
Sbjct: 139 NEHNITHEELSKKVFKSRTSITNTLRLLQLNSYVQQFLATDKISAGHAKIMLGLDNDEQK 198
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE-KYLTDLEKKISSKVGLNI 265
+ I+ +K+SVR+TE+LV+E KKE + K + + E L ++ +K+
Sbjct: 199 MICDSIIGQKLSVRETEKLVKEIKEKKEDKPKKSKPTSEYNFSSLDNIVQKLQEN----- 253
Query: 266 SIKHRNNKGQFCIKYETNEQLKII 289
++K + K F I++ + E + I
Sbjct: 254 NLKVKTEKNYFKIEFNSQEDIDKI 277
>gi|118475466|ref|YP_892665.1| stage 0 sporulation protein J [Campylobacter fetus subsp. fetus
82-40]
gi|118414692|gb|ABK83112.1| stage 0 sporulation protein J [Campylobacter fetus subsp. fetus
82-40]
Length = 281
Score = 89.7 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 90/289 (31%), Positives = 160/289 (55%), Gaps = 13/289 (4%)
Query: 9 RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQ 68
LGRGL+A++ +V + D + D I +PNP PR +F+ E L +L
Sbjct: 2 ALGRGLSAILEDVENAYDKELNRDLISDIDIDKI-----IPNPFQPRKHFDQESLSELSA 56
Query: 69 SIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
SI+ HG+IQP+IV NG +IAGERR RA K+ + I+ N+++++ E+A++E
Sbjct: 57 SIEKHGLIQPIIVIKKGNGYT-LIAGERRLRATKLLGKDSIKAIVANLEDQNLRELALIE 115
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
N+QR++L+P+E A Y++LI EY TQ + +I+ KSR+ + N LR+L L S + +I
Sbjct: 116 NIQRENLSPIELANSYKELIEEYKITQEALSNIIKKSRTVITNTLRLLSLDESTKRLIED 175
Query: 189 EEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+++ GHA+ +V D + IV ++++VRDTE L++ NK +K + +
Sbjct: 176 GKLTQGHAKVIVGLDKDDEKMVVDTIVGQRLNVRDTENLIKRIKNKADKSSNLVSMQQNY 235
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L L+ + +G I + + + + E+++ + ++ +
Sbjct: 236 NENLNILKDAFLN-LGYECKINGK----KMILNFADVEKIQNLIQVIQK 279
>gi|218507534|ref|ZP_03505412.1| chromosome partitioning protein B [Rhizobium etli Brasil 5]
Length = 128
Score = 89.4 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 71/130 (54%), Positives = 95/130 (73%), Gaps = 3/130 (2%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
GRGLAALIGE++Q + ++T + I I + NP NPR +F+ L DL SI
Sbjct: 2 GRGLAALIGEMDQPVPVEAERTVSAD---RMIPIEFVSRNPRNPRRFFDDTELHDLASSI 58
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+ HGI+QP++VR ++ Y+IIAGERR+RAA++A L E+PVIIR+VD+K++LEIAIVENV
Sbjct: 59 RQHGIVQPIVVRTMERDRYEIIAGERRWRAAQLAGLIEIPVIIRDVDDKTALEIAIVENV 118
Query: 131 QRKDLNPLEE 140
R DLNPLEE
Sbjct: 119 PRADLNPLEE 128
>gi|7657950|emb|CAB89208.1| putative partitioning protein [Thermus thermophilus]
Length = 215
Score = 89.0 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 18/209 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS S LGRGL AL+ + + SI PNP PR F
Sbjct: 1 MSRKPS--GLGRGLEALLP--------------KTGAGVVRLPLASIRPNPRQPRKRFAE 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SI+ G++QPL+VR +G Y+++AGERR+RAA MA L EVP +++++ ++
Sbjct: 45 ESLKELADSIREKGLLQPLLVRPQGDG-YELVAGERRYRAALMAGLQEVPAVVKDLTDRE 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+A+VEN+QR+DL+P+EEA GY+ L E G TQ ++ VGK+RS VAN LR+L+LP
Sbjct: 104 ALELALVENLQREDLSPVEEARGYQAL-LEMGLTQEEVARRVGKARSTVANALRLLQLPP 162
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA 209
E + + EI+ GHAR L+ L
Sbjct: 163 EALEALERGEITAGHARALLMLEPEDRLW 191
>gi|51247949|pdb|1VZ0|A Chain A, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
gi|51247950|pdb|1VZ0|B Chain B, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
gi|51247951|pdb|1VZ0|C Chain C, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
gi|51247952|pdb|1VZ0|D Chain D, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
gi|51247953|pdb|1VZ0|E Chain E, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
gi|51247954|pdb|1VZ0|F Chain F, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
gi|51247955|pdb|1VZ0|G Chain G, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
gi|51247956|pdb|1VZ0|H Chain H, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
Length = 230
Score = 89.0 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 18/209 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS S LGRGL AL+ + + SI PNP PR F
Sbjct: 1 MSRKPS--GLGRGLEALLP--------------KTGAGVVRLPLASIRPNPRQPRKRFAE 44
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E L++L SI+ G++QPL+VR +G Y+++AGERR+RAA MA L EVP +++++ ++
Sbjct: 45 ESLKELADSIREKGLLQPLLVRPQGDG-YELVAGERRYRAALMAGLQEVPAVVKDLTDRE 103
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+LE+A+VEN+QR+DL+P+EEA GY+ L E G TQ ++ VGK+RS VAN LR+L+LP
Sbjct: 104 ALELALVENLQREDLSPVEEARGYQAL-LEMGLTQEEVARRVGKARSTVANALRLLQLPP 162
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA 209
E + + EI+ GHAR L+ L
Sbjct: 163 EALEALERGEITAGHARALLMLEPEDRLW 191
>gi|157737835|ref|YP_001490519.1| transcriptional regulator involved in chromosome partitioning ParB
[Arcobacter butzleri RM4018]
gi|157699689|gb|ABV67849.1| transcriptional regulator involved in chromosome partitioning ParB
[Arcobacter butzleri RM4018]
Length = 284
Score = 89.0 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 88/264 (33%), Positives = 153/264 (57%), Gaps = 8/264 (3%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
E + I++ I NP+ PR F+ E L++L +SIK HG++QP++V D+G
Sbjct: 19 ENSNGNVKSGIRKINVSLIKANPNQPRKIFDEEKLQELSESIKEHGLLQPIVVVENDDGT 78
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
+ +IAGERR RA K+A + E+ +I + + E+A++EN+QR DLN +E A Y QL+
Sbjct: 79 FTLIAGERRLRAHKLAEIEEIKAVIVDAEELKLRELALIENIQRDDLNVIELAFCYAQLL 138
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPL 206
+E+ T ++ V KSR+ + N LR+L+L S V++ + ++IS GHA+ + + +
Sbjct: 139 NEHNITHEELSKKVFKSRTSITNTLRLLQLNSYVQQFLATDKISAGHAKIMLGLDNDEQK 198
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE-KYLTDLEKKISSKVGLNI 265
+ I+ +K+SVR+TE+LV+E KKE + K + + E L ++ +K+
Sbjct: 199 MICDSIIGQKLSVRETEKLVKEIKEKKEDKPKKSKPTSEYNFSSLDNIVQKLQEN----- 253
Query: 266 SIKHRNNKGQFCIKYETNEQLKII 289
++K + K F I++ + E + I
Sbjct: 254 NLKVKTEKNYFKIEFNSQEDIDKI 277
>gi|205371922|ref|ZP_03224742.1| DNA binding protein [Bacillus coahuilensis m4-4]
Length = 289
Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 81/235 (34%), Positives = 138/235 (58%), Gaps = 3/235 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + E +T E + I SI+PN PR F+ +E+L ++I +HGIIQP+
Sbjct: 16 EKDVVEGQEEVETVDSKEGVLELPIASIIPNRFQPRTIFDDTKIEELSRTIHTHGIIQPI 75
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR +++G Y++IAGERR+RA ++ +P II+N+ +K + +A++EN+QR++L P+E
Sbjct: 76 VVREMEDGQYELIAGERRWRAVQLLEWETIPAIIKNLSDKETASVALIENLQREELTPIE 135
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR-- 197
EAL Y++L+ + TQ + +GK +S VAN LR+LKLP +++E + +++IS HAR
Sbjct: 136 EALAYDKLLQIHELTQEALAQRLGKGQSTVANKLRLLKLPEAIQEALLRKDISERHARAL 195
Query: 198 -TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L S I+ + +V+ TEE V + + + K + K+ +
Sbjct: 196 IPLKDPSIQEKFLAQIIEYQWNVKQTEERVTKYLEGTQSKAKPKRKAFSKDMRIA 250
>gi|330721993|gb|EGG99926.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [gamma proteobacterium IMCC2047]
Length = 209
Score = 89.0 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 132/211 (62%), Gaps = 7/211 (3%)
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
Y+IIAGERR+RA ++A L+++P I++NV ++S++ +A++EN+QR++LN ++EA +
Sbjct: 3 NRYEIIAGERRWRATQLAGLADIPAIVKNVSDESAVAMALIENIQRENLNSIDEAAALHR 62
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE--EISLGHARTLVSTSD 204
L E+G TQ VGKSR+ VAN++R+L L V+ ++ ++ ++ A + SD
Sbjct: 63 LQEEFGLTQQQTADAVGKSRAAVANLIRLLALNDDVKVLLSEKALDMGHARALLALEDSD 122
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
A+ +VSK++SVR TE LV++ +E+ + + + + + LE K+S ++G +
Sbjct: 123 QSLAAKTVVSKQLSVRQTEALVRKILAAEEQE----KVTPKIDPDIKHLEHKLSEQLGSS 178
Query: 265 ISIKHR-NNKGQFCIKYETNEQLKIICSLLG 294
++I+H KG+ I Y + ++L I S +
Sbjct: 179 VTIQHGAKGKGKLVISYGSTQELDGILSHIK 209
>gi|116334625|ref|YP_796152.1| Spo0J-like protein [Lactobacillus brevis ATCC 367]
gi|116099972|gb|ABJ65121.1| Effector of nucleoid occlusion Noc [Lactobacillus brevis ATCC 367]
Length = 278
Score = 88.2 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 135/238 (56%), Gaps = 4/238 (1%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
+L G N + + + ++ I I I+PN PR F++ + +L Q+I+ HG+
Sbjct: 4 SLFG--NNRDKAARQPAHPVKQTVVMIPIAQIIPNRFQPRQRFDATAITELAQTIQEHGL 61
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
+QP+++R + Y+IIAGERRFRA VP I+ +++ + +A++EN+QR++L
Sbjct: 62 LQPIVLREYEPEHYEIIAGERRFRAVSSLKWETVPAIVEKMNDDETASMALIENLQREEL 121
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+EEA Y+QL++ TQ+ + +GKS+ VAN LR+LKL VR I +IS H
Sbjct: 122 TAIEEAHAYQQLMTLNQLTQSQLAQGIGKSQGFVANKLRLLKLAEPVRTAILNRDISERH 181
Query: 196 ARTLVSTSDPLSLAQ--VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
R L++ S A IV+ ++V++TE L+ + + ++R+K+ + S + +
Sbjct: 182 GRALLALSTDQQEAMLQTIVTDHLTVKETEALIAKGHQQPKRRRKVTKHSVSGDTRVA 239
>gi|325997993|gb|ADZ50201.1| Plasmid replication partition related protein [Helicobacter pylori
2017]
Length = 290
Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 97/261 (37%), Positives = 153/261 (58%), Gaps = 12/261 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKIFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 ESLEELAQSIKEHGLLQPVVVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+LV++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLEEEKQELILNSIIGQKLSVRQTEDLVRDFKINANFDNK 233
Query: 239 IFEGSREKEKYLTDLEKKISS 259
K+ E ++
Sbjct: 234 ---KHGFKQTQTLIAEDELER 251
>gi|311070640|ref|YP_003975563.1| DNA-binding protein Spo0J-like protein [Bacillus atrophaeus 1942]
gi|310871157|gb|ADP34632.1| DNA-binding protein Spo0J-like protein [Bacillus atrophaeus 1942]
Length = 283
Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 73/239 (30%), Positives = 135/239 (56%), Gaps = 4/239 (1%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G + + + +T E I + +IVPN PR F E +++L +I +HGII
Sbjct: 8 LFGLGEKEEEPEIAEHDTNKEEILEIPVDAIVPNRFQPRTIFSDEKIQELAMTIHTHGII 67
Query: 77 QPLIVRAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
QP++VR + Y++IAGERR+RA + ++P II++ + + +A++EN+QR++L
Sbjct: 68 QPIVVRHTEEEGQYELIAGERRWRAVQTLEWVKIPAIIKDFSDTETASVALIENLQREEL 127
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ +EEA Y +L+ + TQ + +GK +S +AN LR+LKLP V++ I +++I+ H
Sbjct: 128 SSIEEAHAYARLLELHDLTQEALAQRLGKGQSTIANKLRLLKLPEPVQDAIMQKKITERH 187
Query: 196 ARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
AR ++ P I+ K ++V+ TE+ V + + +++ K + ++ +
Sbjct: 188 ARAMIPLKQPELQVTLLSEIIEKSLNVKQTEDRVVKMLEQDQRKPKPRRKAFSRDTRIA 246
>gi|307637807|gb|ADN80257.1| Chromosome/plasmid partitioning protein [Helicobacter pylori 908]
gi|325996405|gb|ADZ51810.1| Chromosome partitioning protein / Stage 0 sporulation protein J
[Helicobacter pylori 2018]
Length = 290
Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 97/261 (37%), Positives = 153/261 (58%), Gaps = 12/261 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKIFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 ESLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+LV++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLEEEKQELILNSIIGQKLSVRQTEDLVRDFKINANFDNK 233
Query: 239 IFEGSREKEKYLTDLEKKISS 259
K+ E ++
Sbjct: 234 ---KHGFKQTQTLIAEDELER 251
>gi|219849026|ref|YP_002463459.1| parB-like partition protein [Chloroflexus aggregans DSM 9485]
gi|219543285|gb|ACL25023.1| parB-like partition protein [Chloroflexus aggregans DSM 9485]
Length = 367
Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS KR LG GL AL T T + + +I N PR F+
Sbjct: 1 MS---RKRGLGSGLDALFP-----------ATTTDQTVVRSLPVAAIRANRAQPRTSFDE 46
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L SI+ HGI+QPLIV G Y++IAGERR RAA++A L+ VP I++N +
Sbjct: 47 ATLAELVASIQEHGILQPLIVSEDPEGGYELIAGERRLRAARIAGLTTVPAIVKNATPQQ 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A+VEN+QR DLNP+EEA YE L E+G + +I VGKSR + N R+L+L
Sbjct: 107 FLELALVENIQRADLNPIEEAQAYETLRREFGMSDEEIARRVGKSRVAIVNSRRLLRLAP 166
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA 209
VR+ + IS GH R L+ DP A
Sbjct: 167 VVRQALLDGAISAGHGRALLRLDDPADQA 195
>gi|28379585|ref|NP_786477.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum WCFS1]
gi|254557728|ref|YP_003064145.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum JDM1]
gi|300769524|ref|ZP_07079410.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308181814|ref|YP_003925942.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|28272425|emb|CAD65349.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum WCFS1]
gi|254046655|gb|ACT63448.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum JDM1]
gi|300492939|gb|EFK28121.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308047305|gb|ADN99848.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 283
Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 76/229 (33%), Positives = 134/229 (58%), Gaps = 3/229 (1%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
+L G N+ E T + I + +I+PN PR F+ G+ +L +I HG+
Sbjct: 4 SLFG-SNRDKHKTEAATTPTEQQIVRIPVTAIIPNRFQPRQVFDETGIAELAATIADHGL 62
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
+QP+++R + Y+IIAGERRFRA ++VP II+ +D+ + +A++EN+QR+DL
Sbjct: 63 LQPIVLREYEPQKYEIIAGERRFRAISSLHWADVPAIIQKMDDGETASMALIENLQRQDL 122
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+EEA Y++L+ TQ+ + +GKS+S VAN LR+LKL V+ + + +IS H
Sbjct: 123 TAIEEARAYQELMELNQLTQSALAKELGKSQSLVANKLRLLKLAQPVQTALLQRQISERH 182
Query: 196 ARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
R L++ + A + +++ +++V++TE+LV + + ++K G
Sbjct: 183 GRALLNLAVEQQAAVLKRVLADQLTVKETEQLVAKTQTPPKPKRKRARG 231
>gi|327184263|gb|AEA32710.1| chromosome partitioning protein [Lactobacillus amylovorus GRL 1118]
Length = 278
Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 73/266 (27%), Positives = 139/266 (52%), Gaps = 3/266 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ + I + IVPN + PR F + +++L +++ G++QP++VR Y
Sbjct: 10 DEEVPKNKQIQDIELDKIVPNRYQPRREFSDDSIKELAETLDKDGLLQPIVVREDGEDHY 69
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERR+RAAK + +P I+ N+++ + +A++EN+QR+DLNP++EA Y L+
Sbjct: 70 EIIAGERRYRAAKSLNWETIPAIVNNMNDDQAASLALIENLQREDLNPIDEAKAYTNLMK 129
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
TQ + +GKS+S+VAN LR+LKL V++ + + +I+ H R L++ S+
Sbjct: 130 LNDLTQTALAKDMGKSQSYVANKLRLLKLDDDVQKALIEGKITARHGRALLNLSNDDQER 189
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL-NISIK 268
+ + + + +D K E ++E+ + + K + ++ ++K
Sbjct: 190 VLKEIEDKGLNVKQTEEIAKDVDAYFNPKPKEKETKRERVVKRIPKDLKVQINTIKKAVK 249
Query: 269 HRNNKG-QFCI-KYETNEQLKIICSL 292
+ G + + + + KII L
Sbjct: 250 LAKDSGIKVKVKENNDPDDYKIIIEL 275
>gi|315039147|ref|YP_004032715.1| chromosome partitioning protein [Lactobacillus amylovorus GRL 1112]
gi|312277280|gb|ADQ59920.1| chromosome partitioning protein [Lactobacillus amylovorus GRL 1112]
Length = 278
Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 74/266 (27%), Positives = 139/266 (52%), Gaps = 3/266 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ + I + IVPN + PR F + +++L +++ G++QP++VR Y
Sbjct: 10 DEEVPKNKQIQDIELDKIVPNRYQPRREFSDDSIKELAETLDKDGLLQPIVVREDGEDHY 69
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERR+RAAK + +P I+ N+++ + +A++EN+QR+DLNP++EA Y L+
Sbjct: 70 EIIAGERRYRAAKSLNWETIPAIVNNMNDDQAASLALIENLQREDLNPIDEAKAYTNLMK 129
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
TQ + +GKS+S+VAN LR+LKL V++ + + +I+ H R L++ SD
Sbjct: 130 LNDLTQTALAKDMGKSQSYVANKLRLLKLDDDVQKALIEGKITARHGRALLNLSDDDQER 189
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL-NISIK 268
+ + + + +D K E ++E+ + + K + ++ ++K
Sbjct: 190 VLKEIEDKGLNVKQTEEIAKDVDAYFNPKPKEKETKRERVVKRIPKDLKVQINTIKKAVK 249
Query: 269 HRNNKG-QFCI-KYETNEQLKIICSL 292
+ G + + + + KII L
Sbjct: 250 LAKDSGIKVKVKENNDPDDYKIIIEL 275
>gi|163846996|ref|YP_001635040.1| parB-like partition protein [Chloroflexus aurantiacus J-10-fl]
gi|222524818|ref|YP_002569289.1| parB-like partition protein [Chloroflexus sp. Y-400-fl]
gi|163668285|gb|ABY34651.1| parB-like partition protein [Chloroflexus aurantiacus J-10-fl]
gi|222448697|gb|ACM52963.1| parB-like partition protein [Chloroflexus sp. Y-400-fl]
Length = 368
Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 83/201 (41%), Positives = 112/201 (55%), Gaps = 14/201 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS KR LG GL ALI + + + +I N PR F+
Sbjct: 1 MS---RKRGLGSGLDALIPAASLDQTP-----------VRELPVSAIKANRAQPRTAFDE 46
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L +L SI++HG++QP+IV G Y++IAGERR RAA+MA L+ +P II+N +
Sbjct: 47 TTLAELVASIQTHGVLQPIIVSEDQQGGYELIAGERRLRAARMAGLATIPAIIKNATPQQ 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
LE+A+VENVQR DLNPLEEA YE L E+G + +I VGKSR + N R+L+L
Sbjct: 107 FLELALVENVQRADLNPLEEAQAYETLRREFGLSDEEIARRVGKSRVAIVNSRRLLRLSP 166
Query: 181 SVREMIRKEEISLGHARTLVS 201
R+ + IS GH R L+
Sbjct: 167 VARQALLDGTISAGHGRALLR 187
Score = 42.7 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 7/61 (11%), Positives = 17/61 (27%)
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ + ++ + + I + I +EQL+ + L N
Sbjct: 308 PERQRLPATRSPEDQMAQQMFEELLQTPVQIARSGRTIKVTITLYDDEQLQGLYDRLSGN 367
Query: 297 D 297
Sbjct: 368 S 368
>gi|89100944|ref|ZP_01173791.1| YyaA [Bacillus sp. NRRL B-14911]
gi|89084353|gb|EAR63507.1| YyaA [Bacillus sp. NRRL B-14911]
Length = 292
Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 83/225 (36%), Positives = 137/225 (60%), Gaps = 3/225 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
++ T E I I IVPN PR F+ E +E+L ++I +HGIIQP++VR D+G +
Sbjct: 29 EEEPTNREEVRKIPIGQIVPNRFQPRTVFDDEKIEELSRTIHTHGIIQPIVVREFDDGKF 88
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERR+RA EVP I++N+ + + +A++EN+QR++L+P+EEA+ Y +L+
Sbjct: 89 EIIAGERRWRAMNKLGWDEVPAIVKNLSDTETASVALIENLQREELSPIEEAVAYGKLLE 148
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL- 208
+ TQ + +GK +S VAN LR+LKLP V+E + ++I+ HAR+L+ +P
Sbjct: 149 LHNLTQEALAQRLGKGQSTVANKLRLLKLPEQVQEALLAKQITERHARSLIPLKNPEKQV 208
Query: 209 --AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ I+ K ++V+ TEE V + + E + K + K+ +
Sbjct: 209 KLLEEIIEKSLNVKQTEERVVKLLEQSENKPKPKRKAFSKDMRIA 253
>gi|78777606|ref|YP_393921.1| ParB-like partition protein [Sulfurimonas denitrificans DSM 1251]
gi|78498146|gb|ABB44686.1| chromosome segregation DNA-binding protein [Sulfurimonas
denitrificans DSM 1251]
Length = 280
Score = 87.4 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 82/273 (30%), Positives = 146/273 (53%), Gaps = 11/273 (4%)
Query: 25 IDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI 84
ID + +S I + I PNP+ PR +FE L +L +SIK+ G+IQP+IV
Sbjct: 17 IDEAYENEVPQKDSIVEIPLKDIRPNPYQPRKHFEESSLFELGESIKNDGLIQPIIVTE- 75
Query: 85 DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
D Y +IAGERR RA+K+A L + I+ N D + + A++EN+QR +LN +E A Y
Sbjct: 76 DVDGYVLIAGERRLRASKLAKLKTIRAIVLNSDEQKMRQFALIENIQRDELNSIELAHAY 135
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSD 204
+LI + TQ ++ + + KSR+H+ N +R+L+L + + +++I+ GHA+ LV +
Sbjct: 136 GELIKLHNITQEELSTKIHKSRTHITNTIRLLQLSQKTQRALIEKKITTGHAKVLVGLDE 195
Query: 205 PLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVG 262
I+ +K+SVR+ E +++ N + KK E + ++ ++ +G
Sbjct: 196 KQQQLIVNSIIGQKLSVREVETVIKSMKNNNNETKKESEVTLY---DFKAIKDRLLQ-LG 251
Query: 263 LNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
++N I+++ QL++ + +
Sbjct: 252 FIAKSSNKN----LTIEFKNELQLELFLQNISK 280
>gi|325957618|ref|YP_004293030.1| chromosome partitioning protein [Lactobacillus acidophilus 30SC]
gi|325334183|gb|ADZ08091.1| chromosome partitioning protein [Lactobacillus acidophilus 30SC]
Length = 278
Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 72/266 (27%), Positives = 139/266 (52%), Gaps = 3/266 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ + I + I+PN + PR F + +++L +++ G++QP++VR Y
Sbjct: 10 DEEVPKNKQIQDIELDKIIPNRYQPRREFSDDSIKELAETLDKDGLLQPIVVREDGEDHY 69
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERR+RAAK + +P I+ N+++ + +A++EN+QR+DLNP++EA Y L+
Sbjct: 70 EIIAGERRYRAAKSLNWETIPAIVNNMNDDQAASLALIENLQREDLNPIDEAKAYTNLMK 129
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
TQ + +GKS+S+VAN LR+LKL V++ + + +I+ H R L++ S+
Sbjct: 130 LNDLTQTALAKDMGKSQSYVANKLRLLKLDDDVQKALIEGKITARHGRALLNLSNDDQER 189
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL-NISIK 268
+ + + + +D K E ++E+ + + K + ++ ++K
Sbjct: 190 VLKEIEDKGLNVKQTEEIAKDVDAYFNPKPKEKETKRERVVKRIPKDLKVQINTIKKAVK 249
Query: 269 HRNNKG-QFCI-KYETNEQLKIICSL 292
+ G + + + + KII L
Sbjct: 250 LAKDSGIKVKVKENNDPDDYKIIIEL 275
>gi|138897064|ref|YP_001127517.1| DNA binding protein [Geobacillus thermodenitrificans NG80-2]
gi|196249885|ref|ZP_03148581.1| parB-like partition protein [Geobacillus sp. G11MC16]
gi|205829242|sp|A4ITW8|NOC_GEOTN RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|134268577|gb|ABO68772.1| Probable DNA binding protein [Geobacillus thermodenitrificans
NG80-2]
gi|196210761|gb|EDY05524.1| parB-like partition protein [Geobacillus sp. G11MC16]
Length = 281
Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 134/231 (58%), Gaps = 3/231 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ E + E I + SI+PN PR F+ E + +L +I++HGIIQP++VR
Sbjct: 13 EKEQEEAGGKQEREEVRNIPVASIIPNRFQPRTVFDEEKIAELALTIRTHGIIQPIVVRE 72
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
DNG ++IIAGERR+RA + +E+P II+N+++K + +A++EN+QR++L P+EEA+
Sbjct: 73 CDNGQFEIIAGERRWRAVQKLGWTEIPAIIKNLNDKETASVALIENLQREELTPIEEAMA 132
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGHARTLV 200
Y +LI + TQ + +GK +S +AN LR+LKLP V+E + + E L
Sbjct: 133 YARLIELHDLTQEALAQRLGKGQSTIANKLRLLKLPQEVQEALLQRAITERHARALIALK 192
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L L Q I+ K+++V+ TE+ V + E++ K + ++ +
Sbjct: 193 DKEKQLKLLQEIIDKQLNVKQTEDRVLKMLEAGERKPKPKRKAFSRDMRIA 243
>gi|207108738|ref|ZP_03242900.1| plasmid replication-partition related protein [Helicobacter pylori
HPKX_438_CA4C1]
Length = 248
Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 92/248 (37%), Positives = 148/248 (59%), Gaps = 9/248 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKVFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSP 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLDGEKQELILNSIIGQKLSVRQTEDLARDFKINANFENK 233
Query: 239 IFEGSREK 246
+ +
Sbjct: 234 KHGFKQTQ 241
>gi|149182300|ref|ZP_01860779.1| hypothetical protein BSG1_10854 [Bacillus sp. SG-1]
gi|148849992|gb|EDL64163.1| hypothetical protein BSG1_10854 [Bacillus sp. SG-1]
Length = 289
Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 138/240 (57%), Gaps = 6/240 (2%)
Query: 18 IGEVNQSIDSPEK---KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
IGE +Q D + + + I I IVPN PR F E +E+L ++I +HG
Sbjct: 11 IGEKDQENDQELESVVNDTSDRDEVKNIPISQIVPNRFQPRTIFNEEKIEELSRTIHTHG 70
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
IIQP+++R Y+IIAGERRFRA + VP II+N+ + + +A++EN+QR++
Sbjct: 71 IIQPIVLRESGENQYEIIAGERRFRAVSLLGWETVPAIIKNLTDTETASVALIENLQREE 130
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
L+P+EEA+ Y +L+ + TQ + +GK +S VAN LR+LKLP V+E I ++I+
Sbjct: 131 LSPIEEAVAYGKLLELHNLTQEALAQRLGKGQSTVANKLRLLKLPEEVQEAILAKQITER 190
Query: 195 HARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
HAR L+ P Q ++ K ++V+ TE+ V + ++ E++ K + K+ +
Sbjct: 191 HARALIPLKKPEKQVALLQEVIEKNLNVKQTEDRVDKMLSEGEEKPKPKRRAFSKDMRIA 250
>gi|126651987|ref|ZP_01724179.1| Stage 0 sporulation protein J [Bacillus sp. B14905]
gi|126591256|gb|EAZ85365.1| Stage 0 sporulation protein J [Bacillus sp. B14905]
Length = 299
Score = 86.7 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 81/247 (32%), Positives = 133/247 (53%), Gaps = 4/247 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + + + E + I IVPN PR F+ E +E+L ++I +HG+IQP+
Sbjct: 16 EPIVKNEVEQAEAVQTAEEVIKLPIDEIVPNRFQPRTIFDDEKIEELSRTIHTHGVIQPI 75
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR Y+IIAGERR+RA K +EVP I+RN+ +K + IA++EN+QR++L +E
Sbjct: 76 VVRKTSENQYEIIAGERRYRAMKKLQWTEVPAIVRNLTDKETASIALIENLQREELTAIE 135
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR-- 197
EA+ Y++L+ + TQ + +GK +S VAN LR+L+LP V++ I + +IS HAR
Sbjct: 136 EAVAYQKLLELHELTQEALAQRLGKGQSTVANKLRLLRLPDEVQQAILQRKISERHARAL 195
Query: 198 -TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ L + Q V +VR EE +Q + ++ + + K + K
Sbjct: 196 IAIKDQPLQLEILQQTVDNDWNVRQLEEQIQVILHPVTDEQEESVPKKARPKR-KAISKD 254
Query: 257 ISSKVGL 263
+ +
Sbjct: 255 VRIALNT 261
>gi|296330029|ref|ZP_06872513.1| DNA-binding protein Spo0J-like [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305676753|ref|YP_003868425.1| DNA-binding protein Spo0J-like protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296153068|gb|EFG93933.1| DNA-binding protein Spo0J-like [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414997|gb|ADM40116.1| DNA-binding protein Spo0J-like protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 283
Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 135/238 (56%), Gaps = 4/238 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
G + + + ET E I +++IVPN PR F E +++L +I +HGIIQ
Sbjct: 9 FGLGEKEQEPEIAEHETNKEEILEIPVNAIVPNRFQPRTIFSDEKIKELAMTIHTHGIIQ 68
Query: 78 PLIVRAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
P++VR + Y++IAGERR+RA + ++P II++ + + +A++EN+QR++L+
Sbjct: 69 PIVVRHTEEEGQYELIAGERRWRAVQSLEWEKIPAIIKDFSDTETASVALIENLQREELS 128
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
+EEA Y +L+ + TQ + +GK +S +AN LR+LKLP V++ I +++I+ HA
Sbjct: 129 SIEEAHAYARLLELHDLTQEALAQRLGKGQSTIANKLRLLKLPQPVQDAIMEKKITERHA 188
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
R L+ P I+ K ++V+ TE+ V + + +++ K + ++ +
Sbjct: 189 RALIPLKQPELQVTLLTEIIEKSLNVKQTEDRVVKMLEQGQRKPKPRRKAFSRDTRIA 246
>gi|327438170|dbj|BAK14535.1| predicted transcriptional regulator [Solibacillus silvestris
StLB046]
Length = 294
Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 88/249 (35%), Positives = 142/249 (57%), Gaps = 12/249 (4%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNG 87
+ E I I I+PN + PR F+ E +E+L ++I +HG+IQP+++R D
Sbjct: 26 ENISMASEEVVKIPIDKIIPNRYQPRTVFDDEKIEELARTIHTHGVIQPIVIRPINDDAD 85
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y+IIAGERR+RA + +EVP I+RN++++ + IA++EN+QR++L +EEAL Y+QL
Sbjct: 86 KYEIIAGERRYRAMRSLQWTEVPAIVRNLNDRETASIALIENLQREELTAIEEALAYQQL 145
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSD 204
+ + TQ + +GK +S VAN LR+LKLP V++ I EIS HAR +
Sbjct: 146 LGLHQLTQEALAQRLGKGQSTVANKLRLLKLPQFVQDAILNREISERHARALIVIKDEQL 205
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE---KEKYL--TDLEKKIS- 258
+ L +VR EE +Q+ N E K + SR+ K+ + +++ +S
Sbjct: 206 QMQLIAATKEFDWNVRQLEEQIQKILNPDEPEIKKRKPSRKAISKDVRIALNTIKQSLSM 265
Query: 259 -SKVGLNIS 266
+K G+N+
Sbjct: 266 VTKSGINVK 274
>gi|52082645|ref|YP_081436.1| putative DNA binding partioning protein [Bacillus licheniformis
ATCC 14580]
gi|52788044|ref|YP_093873.1| YyaA [Bacillus licheniformis ATCC 14580]
gi|319648511|ref|ZP_08002727.1| nucleoid occlusion protein [Bacillus sp. BT1B_CT2]
gi|81608803|sp|Q65CN4|NOC_BACLD RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|52005856|gb|AAU25798.1| putative DNA binding partioning protein [Bacillus licheniformis
ATCC 14580]
gi|52350546|gb|AAU43180.1| YyaA [Bacillus licheniformis ATCC 14580]
gi|317389590|gb|EFV70401.1| nucleoid occlusion protein [Bacillus sp. BT1B_CT2]
Length = 283
Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 136/239 (56%), Gaps = 4/239 (1%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G ++ ++ + +T E I + I+PN PR F E +++L +I +HGII
Sbjct: 8 LFGLGDKEEEAEIAEHDTNKEEIQEIPVGDIIPNRFQPRTIFSEEKIKELAATIHTHGII 67
Query: 77 QPLIVRAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
QP++VR + Y++IAGERR+RA + +VP II++ + + +A++EN+QR++L
Sbjct: 68 QPIVVRKTEREGQYELIAGERRWRAVQTLDWEKVPAIIKDFSDTETASVALIENLQREEL 127
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ +EEA Y +L+ + TQ + +GK +S +AN LR+LKLP V+E I K+EIS H
Sbjct: 128 SSIEEAHAYARLLELHDLTQEALAQRLGKGQSTIANKLRLLKLPEEVQEAILKKEISERH 187
Query: 196 ARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
AR L+ P ++ K ++V+ TE+ V + + +++ K + ++ +
Sbjct: 188 ARALIPLKQPDLQVKLLHEVIEKSLNVKQTEDRVVKMLEQDKRKPKPKRKAYSRDARIA 246
>gi|81427631|ref|YP_394628.1| chromosome partitioning protein, DNA-binding exonuclease
[Lactobacillus sakei subsp. sakei 23K]
gi|78609270|emb|CAI54317.1| Chromosome partitioning protein, DNA-binding exonuclease
[Lactobacillus sakei subsp. sakei 23K]
Length = 299
Score = 86.7 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 135/228 (59%), Gaps = 2/228 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+++T + + + +IVPN PR F ++ + +L +I+ HG++QP+++R ++
Sbjct: 8 KKKEETSSSVNQVVMVPVAAIVPNRFQPRKVFNTDHIGELASTIEQHGLLQPIVLREYED 67
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
++IIAGERRFRA + +E+P I++ +D+ + +A++EN+QR++L +EEA Y+
Sbjct: 68 QKFEIIAGERRFRAIQTLKWAELPAIVQKMDDHETASMALIENLQREELTAVEEADAYQN 127
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSD 204
L+ G+TQ + +GKS+S VAN LR+LKL V+E I EIS H R+L + +
Sbjct: 128 LMKLNGFTQASLAEKMGKSQSFVANKLRLLKLSQPVQEAIMNHEISERHGRSLLKLDEFN 187
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+ I++++++V+DTE LV N + ++ E+ + +
Sbjct: 188 QQMVLHQILAEQLTVKDTEALVASIINPEPAVEEEVADVEEEPATIEE 235
>gi|16081151|ref|NP_391979.1| DNA-binding protein Spo0J-like [Bacillus subtilis subsp. subtilis
str. 168]
gi|221312082|ref|ZP_03593929.1| hypothetical protein Bsubs1_22126 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316407|ref|ZP_03598212.1| hypothetical protein BsubsN3_22032 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221321320|ref|ZP_03602614.1| hypothetical protein BsubsJ_21985 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325603|ref|ZP_03606897.1| hypothetical protein BsubsS_22141 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|586854|sp|P37524|NOC_BACSU RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|40028|emb|CAA44406.1| unnamed protein product [Bacillus subtilis]
gi|467383|dbj|BAA05229.1| DNA binding protein (probable) [Bacillus subtilis]
gi|2636646|emb|CAB16136.1| DNA-binding protein Spo0J-like [Bacillus subtilis subsp. subtilis
str. 168]
gi|291486737|dbj|BAI87812.1| hypothetical protein BSNT_06283 [Bacillus subtilis subsp. natto
BEST195]
Length = 283
Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 135/238 (56%), Gaps = 4/238 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
G + + + +T E I +++IVPN PR F E +++L +I +HGIIQ
Sbjct: 9 FGLGEKEQEPEIAEHDTNKEEILEIPVNAIVPNRFQPRTIFSDEKIKELAMTIHTHGIIQ 68
Query: 78 PLIVRAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
P++VR + Y++IAGERR+RA + ++P II++ + + +A++EN+QR++L+
Sbjct: 69 PIVVRHTEEEGQYELIAGERRWRAVQSLEWEKIPAIIKDFSDTETASVALIENLQREELS 128
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
+EEA Y +L+ + TQ + +GK +S +AN LR+LKLP V+E I +++I+ HA
Sbjct: 129 SIEEAHAYARLLELHDLTQEALAQRLGKGQSTIANKLRLLKLPQPVQEAIMEKKITERHA 188
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
R L+ P I+ K ++V+ TE+ V + + +++ K + ++ +
Sbjct: 189 RALIPLKQPELQVTLLTEIIEKSLNVKQTEDRVVKMLEQGQRKPKPRRKAFSRDTRIA 246
>gi|299782735|gb|ADJ40733.1| Chromosome partitioning protein ParB [Lactobacillus fermentum CECT
5716]
Length = 311
Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 124/218 (56%), Gaps = 2/218 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K E + I + IVPN + PR F+ +++L Q+I HG++QP+I+R + G Y
Sbjct: 10 KSKEPVKNQVVEIPLAQIVPNRYQPRQVFDQTAIQELAQTIDEHGLLQPIILREYETGKY 69
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERRFRA + ++ P I+ ++++ + +A++EN+QR L+P+EEA Y+QL+
Sbjct: 70 EIIAGERRFRAMSLLDWTKAPAIVEKMNDQETASLALIENLQRSQLSPVEEAQAYQQLME 129
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLS 207
TQ+ + +GKS+S VAN LR+L+L + V+ I +IS H R + +S
Sbjct: 130 LNKLTQSALAKGMGKSQSFVANKLRLLQLITPVQNAIMDHKISERHGRAMLSLSEDQQRD 189
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ IV+ +VR TE+ + K + + RE
Sbjct: 190 ILMKIVNNDWTVRQTEDEIARMQGKPVPSEVEAQKQRE 227
>gi|153820115|ref|ZP_01972782.1| ParB family protein [Vibrio cholerae NCTC 8457]
gi|126509346|gb|EAZ71940.1| ParB family protein [Vibrio cholerae NCTC 8457]
Length = 105
Score = 86.3 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPE----KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+KR LG+GL AL+ + + + + ++ + +SI ++ P + PR
Sbjct: 1 MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSAEGELADLSISNLKPGIYQPRKDLSP 60
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKM 103
E LE+L SI+S GIIQP++VR + G Y+IIAGERR+RAAK
Sbjct: 61 EALEELAASIQSQGIIQPIVVRHLPTGGYEIIAGERRWRAAKQ 103
>gi|321313660|ref|YP_004205947.1| DNA-binding protein Spo0J-like protein [Bacillus subtilis BSn5]
gi|320019934|gb|ADV94920.1| DNA-binding protein Spo0J-like protein [Bacillus subtilis BSn5]
Length = 283
Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 135/238 (56%), Gaps = 4/238 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
G + + + +T E I +++IVPN PR F E +++L +I +HGIIQ
Sbjct: 9 FGLGEKEQEPEIAEHDTNKEEILEIPVNAIVPNRFQPRTIFSDEKIKELAMTIHTHGIIQ 68
Query: 78 PLIVRAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
P++VR + Y++IAGERR+RA + ++P II++ + + +A++EN+QR++L+
Sbjct: 69 PIVVRHTEEEGQYELIAGERRWRAVQSLEWEKIPAIIKDFSDTETASVALIENLQREELS 128
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
+EEA Y +L+ + TQ + +GK +S +AN LR+LKLP V+E I +++I+ HA
Sbjct: 129 SIEEAHAYARLLELHDLTQEALAQRLGKGQSTIANKLRLLKLPQPVQEAIMEKKITERHA 188
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
R L+ P I+ K ++V+ TE+ V + + +++ K + ++ +
Sbjct: 189 RALIPLKQPELQVTLLTEIIEKSLNVKQTEDRVVKMLEQGKRKPKPRRKAFSRDTRIA 246
>gi|269792270|ref|YP_003317174.1| parB-like partition protein [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099905|gb|ACZ18892.1| parB-like partition protein [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 362
Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 79/260 (30%), Positives = 152/260 (58%), Gaps = 5/260 (1%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L+ +++ P E + +S+ I PNP+ PR + E +++L +SI+ G++
Sbjct: 77 LLPPPDEAAPFPLPPVNVPSEGLNMVSVDLISPNPYQPRQMMDEEEIKELAESIRQVGVL 136
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP+++R + + Y+++AGERR RAAK A L+ VP +I +VD ++ +A+VEN+QRK+L+
Sbjct: 137 QPILIRPVGDR-YELVAGERRLRAAKEAGLATVPALIVDVDPQAQQLLALVENLQRKNLS 195
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
+EEA + L+ G +Q ++ +G+S++ VAN +R+L+L V+E++ + HA
Sbjct: 196 AVEEARCLQDLLERTGLSQAELAKRLGRSQAAVANKIRLLRLDPEVQELVVSGRLGERHA 255
Query: 197 RTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK-IFEGSREKEKYLTDL 253
R+L V LA ++ + ++VRD E +V + ++ ++K S ++ + +T
Sbjct: 256 RSLLAVPPERQRELAYRVIDEDLNVRDLERIVSIESGGEKPQRKRASSRSEDESRPVTGP 315
Query: 254 EKKISSKVGLNISIKHRNNK 273
++ ++G ++ KHRN
Sbjct: 316 AGELLRELGALVN-KHRNKG 334
>gi|227529771|ref|ZP_03959820.1| stage 0 DNA-binding protein [Lactobacillus vaginalis ATCC 49540]
gi|227350255|gb|EEJ40546.1| stage 0 DNA-binding protein [Lactobacillus vaginalis ATCC 49540]
Length = 324
Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 74/222 (33%), Positives = 124/222 (55%), Gaps = 2/222 (0%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
I + I+PN + PR F+ + + +L Q+I HG++QP++VR ++ Y+IIAG
Sbjct: 16 TKNKVVEIKVDQIIPNRYQPRKVFDQDAIRELAQTIDEHGLLQPIVVREYESAKYEIIAG 75
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR+RA K+ + VP I+ + +K + +A++EN+QR L+ +EEA Y QL+ T
Sbjct: 76 ERRYRAVKLLNWDTVPAIVEKMSDKETASLALIENLQRSQLSSVEEAQAYRQLMDLNHLT 135
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVI 212
Q + +GKS+S VAN LR+LKL V+ I IS H R + + + +
Sbjct: 136 QAALAKGMGKSQSFVANKLRLLKLIKPVQTAILDHRISERHGRAMLDLDEKQQREMLMRV 195
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
V+++++VR TE+ V + + + + +K + L DLE
Sbjct: 196 VNERLTVRQTEDGVARTLGRPLPSELAKQRAEKKRQELADLE 237
>gi|330961495|gb|EGH61755.1| ParB family protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 83
Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ KR LGRGL AL+ S E+ + P + + I + PR +
Sbjct: 1 MA--VKKRGLGRGLDALLSSPTVS-SLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ LE+L QSIKS G++QP++VR I N
Sbjct: 58 QALEELAQSIKSQGVMQPIVVRPIGN 83
>gi|15612131|ref|NP_223783.1| plasmid replication-partition related protein [Helicobacter pylori
J99]
gi|12230507|sp|Q9ZK75|PARB_HELPJ RecName: Full=Probable chromosome-partitioning protein parB
gi|4155659|gb|AAD06646.1| putative [Helicobacter pylori J99]
Length = 290
Score = 85.9 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 95/261 (36%), Positives = 152/261 (58%), Gaps = 12/261 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + LGRGLA + E+N+ E+ + I ++PNP+ PR F
Sbjct: 1 MAKN---KVLGRGLADIFPEINEVY---EQGLYERANRVVELGIDEVMPNPYQPRKIFSE 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ LE+L QSIK HG++QP++V + +NG Y +IAGERR RA+K+A + + I+ +++ +
Sbjct: 55 DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEK 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A++EN+QR+DLNPLE A Y++L+ Y TQ ++ IV KSR+HVANI+R+L L S
Sbjct: 114 MREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSS 173
Query: 181 SVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V+ + +E+I+ GHA+ LV + I+ +K+SVR TE+L ++ K
Sbjct: 174 KVQNALLEEKITSGHAKVLVGLEEEKQELILNSIIGQKLSVRQTEDLARDFKINANFDNK 233
Query: 239 IFEGSREKEKYLTDLEKKISS 259
K+ E ++
Sbjct: 234 ---KHGFKQTQTLIAEDELER 251
>gi|227514198|ref|ZP_03944247.1| stage 0 DNA-binding protein [Lactobacillus fermentum ATCC 14931]
gi|227087430|gb|EEI22742.1| stage 0 DNA-binding protein [Lactobacillus fermentum ATCC 14931]
Length = 311
Score = 85.5 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 125/218 (57%), Gaps = 2/218 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K E + + + IVPN + PR F+ +++L Q+I HG++QP+I+R + G Y
Sbjct: 10 KSKEPVKNQVVEVPLAQIVPNRYQPRQVFDQTAIQELAQTIDEHGLLQPIILREYETGKY 69
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERRFRA + + ++ P I+ ++++ + +A++EN+QR L+P+EEA Y+QL+
Sbjct: 70 EIIAGERRFRAMSLLNWTKAPAIVEKMNDQETASLALIENLQRSQLSPVEEAQAYQQLME 129
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLS 207
TQ+ + +GKS+S VAN LR+L+L + V+ I +IS H R + +S
Sbjct: 130 LNKLTQSALAKGMGKSQSFVANKLRLLQLITPVQNAIMDHKISERHGRAMLSLSEDQQRD 189
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ IV+ +VR TE+ + K + + RE
Sbjct: 190 ILMKIVNNDWTVRQTEDEIARMQGKPVPSEVEAQKQRE 227
>gi|224475500|ref|YP_002633106.1| putative DNA-binding protein [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420107|emb|CAL26921.1| putative DNA-binding protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 280
Score = 85.5 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 151/274 (55%), Gaps = 11/274 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G N+ D E + + I I IVPN + PR F+
Sbjct: 1 MKKPFSK---------LFGLTNKDEDITGYTEEERNNNVESIQIERIVPNRYQPRQVFDQ 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +L +SI+ HG++QP++VR I+ G+++IIAGERRFRA ++ VIIR + ++
Sbjct: 52 NKINELAESIQEHGLLQPIVVRPIEEGMFEIIAGERRFRALSTNQMAYADVIIREMTDEE 111
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ VGKS+S +AN LR+LKL
Sbjct: 112 TAVVALIENIQRENLSAVEEAEAYQKLLELGDTTQSELAQSVGKSQSFIANKLRLLKLAP 171
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V++ + + +I+ HAR L ++ + Q I+ + ++V+ TE V+ ++ + K
Sbjct: 172 KVKQKLSEGKITERHARALLSLTFEQQEEMVQTIIDQHLNVKQTEARVKSLVGPEKVKAK 231
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
F+ +++ L+ + I I+ +
Sbjct: 232 PFQFAKDLTNARETLQSSLDKIEQSGIHIEQKER 265
>gi|221090582|ref|XP_002154352.1| PREDICTED: hypothetical protein, partial [Hydra magnipapillata]
Length = 235
Score = 85.5 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 85/234 (36%), Positives = 141/234 (60%), Gaps = 10/234 (4%)
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QPL+VR G ++IIAGERR+RAAK+A L VPV+I +++ +LEI ++EN+QR DLN
Sbjct: 2 QPLLVRQTQPGKFEIIAGERRWRAAKIAKLERVPVVIIACNDQEALEIGLIENLQRHDLN 61
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
PLEEA ++L E+ TQ I S +GKSRS+VANI+R+ L +++++I++ ++S GHA
Sbjct: 62 PLEEAEAIKRLQEEFKLTQEQIASSIGKSRSYVANIIRLNTLDPNIKKLIKENKLSAGHA 121
Query: 197 RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE----------K 246
R L++ +P LA+ I+ + +SVRDTE+LV+ K + ++ S
Sbjct: 122 RALITAQNPSELAEQIIQENLSVRDTEKLVKSHSQKNKSNNNLYNSSASASSGKQFVGPM 181
Query: 247 EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFEY 300
+ + L +++ + + + + + G I ++ +QL I+ S L + Y
Sbjct: 182 DTDIQVLSDQLAKNLNMKVHLSVKGQSGSLTINFQNLDQLDILLSRLQSHSGSY 235
>gi|319651092|ref|ZP_08005226.1| YyaA protein [Bacillus sp. 2_A_57_CT2]
gi|317397262|gb|EFV77966.1| YyaA protein [Bacillus sp. 2_A_57_CT2]
Length = 293
Score = 85.5 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 82/233 (35%), Positives = 138/233 (59%), Gaps = 3/233 (1%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ + + + + E I I IVPN PR F+ E +E+L ++I +HGIIQP++V
Sbjct: 22 KPAEEQLDIEDLSDREEVKKIPIDQIVPNRFQPRTVFDDEKIEELSRTIHTHGIIQPIVV 81
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
R ++G ++IIAGERR+RA K E P I++N+ + + +A++EN+QR++L+P+EEA
Sbjct: 82 REFEDGQFEIIAGERRYRAMKKLGWEEAPAIVKNLSDTETASVALIENLQREELSPIEEA 141
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+ Y +L+ + TQ + +GK +S VAN LR+LKLP V++ + + I+ HAR+L+
Sbjct: 142 VAYGKLLELHNLTQEALAQRLGKGQSTVANKLRLLKLPQPVQDALLNKSITERHARSLIP 201
Query: 202 TSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
DP Q IV K ++V+ TE+ V + +K + K + K+ +
Sbjct: 202 LKDPEKQVALLQEIVEKNLNVKQTEDRVVKILEQKNPKPKPKRKAFSKDMRIA 254
>gi|260662613|ref|ZP_05863508.1| chromosome partitioning protein ParB [Lactobacillus fermentum
28-3-CHN]
gi|260553304|gb|EEX26247.1| chromosome partitioning protein ParB [Lactobacillus fermentum
28-3-CHN]
Length = 311
Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 125/218 (57%), Gaps = 2/218 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K E + + + IVPN + PR F+ +++L Q+I HG++QP+I+R + G Y
Sbjct: 10 KSKEPVKNQVVEVPLAQIVPNRYQPRQVFDQTAIQELAQTIDEHGLLQPIILREYETGKY 69
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERRFRA + + ++ P I+ ++++ + +A++EN+QR L+P+EEA Y+QL+
Sbjct: 70 EIIAGERRFRAMSLLNWTKAPAIVEKMNDQETASLALIENLQRSQLSPVEEAQAYQQLME 129
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLS 207
TQ+ + +GKS+S VAN LR+L+L + V+ I +IS H R + +S
Sbjct: 130 LNKLTQSALAKGMGKSQSFVANKLRLLQLITPVQNAIMDHKISERHGRAMLSLSEDQQRD 189
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ IV+ +VR TE+ + K + + RE
Sbjct: 190 ILMKIVNNDWTVRQTEDEIARMQGKPVPSEVEAQKQRE 227
>gi|184154552|ref|YP_001842892.1| chromosome partitioning protein ParB [Lactobacillus fermentum IFO
3956]
gi|183225896|dbj|BAG26412.1| chromosome partitioning protein ParB [Lactobacillus fermentum IFO
3956]
Length = 311
Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 124/218 (56%), Gaps = 2/218 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K E + + + IVPN + PR F+ +++L Q+I HG++QP+I+R + G Y
Sbjct: 10 KSKEPVKNQVVEVPLAQIVPNRYQPRQVFDQTAIQELAQTIDEHGLLQPIILREYETGKY 69
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERRFRA + ++ P I+ ++++ + +A++EN+QR L+P+EEA Y+QL+
Sbjct: 70 EIIAGERRFRAMSLLDWTKAPAIVEKMNDQETASLALIENLQRSQLSPVEEAQAYQQLME 129
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLS 207
TQ+ + +GKS+S VAN LR+L+L + V+ I +IS H R + +S
Sbjct: 130 LNKLTQSALAKGMGKSQSFVANKLRLLQLITPVQNAIMDHKISERHGRAMLSLSEDQQRD 189
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ IV+ +VR TE+ + K + + RE
Sbjct: 190 ILMKIVNNDWTVRQTEDEIARMQGKPVPSEVEAQKQRE 227
>gi|15834685|ref|NP_296444.1| ParB family chromosome partioning protein [Chlamydia muridarum
Nigg]
gi|270284852|ref|ZP_06194246.1| probable chromosome-partitioning protein parB [Chlamydia muridarum
Nigg]
gi|270288880|ref|ZP_06195182.1| probable chromosome-partitioning protein parB [Chlamydia muridarum
Weiss]
gi|301336231|ref|ZP_07224433.1| putative chromosome partitioning protein [Chlamydia muridarum
MopnTet14]
gi|12230473|sp|Q9PLN9|PARB_CHLMU RecName: Full=Probable chromosome-partitioning protein parB
gi|7190096|gb|AAF38945.1| chromosome partioning protein, ParB family [Chlamydia muridarum
Nigg]
Length = 280
Score = 85.5 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 88/274 (32%), Positives = 149/274 (54%), Gaps = 13/274 (4%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKI 91
++ ++I I +P PR F E L++L SIK+ G+I P +VR Y++
Sbjct: 7 EDTLLEVNIDDIRVSPFQPRRIFFEEDLKELILSIKAVGLIHPPVVREIRNGDKVLYYEL 66
Query: 92 IAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
IAGERR+RA + A +PV+++ V + + E ++EN+QR +LNPLE A + +LI
Sbjct: 67 IAGERRWRALQSAGYKTIPVVLKQVLADDLAAEATLIENIQRVNLNPLEMAEAFRRLIVV 126
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSD---PLS 207
+G TQ+ + VGK RS VAN LR+ L + ++E I E++LGHA+ ++S D
Sbjct: 127 FGLTQDKVAKKVGKKRSTVANYLRLFSLSNEIQEKINSGELTLGHAKVILSLEDESLRQI 186
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
L++ I+S K++VR+ E + KE K E S +K L ++++++ G +++
Sbjct: 187 LSEKIISSKLAVREAEIEAKRLLKGKEDASK-KEASLQKTSCLVSYQERLATTFGYPVTV 245
Query: 268 KHRNNKGQFCIKYE--TNEQLKIICSLLGENDFE 299
K + + C+ + E L+ + L FE
Sbjct: 246 KPQGK--RICVSFFVEGEEALESLEKALTAGSFE 277
>gi|259502034|ref|ZP_05744936.1| chromosome partitioning protein Spo0J [Lactobacillus antri DSM
16041]
gi|259169998|gb|EEW54493.1| chromosome partitioning protein Spo0J [Lactobacillus antri DSM
16041]
Length = 319
Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 125/228 (54%), Gaps = 2/228 (0%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ + + I + IVPN + PR F+ EG+++L Q+I HG++QP+++R +
Sbjct: 10 KSDSNDSKQKVVEIKLDQIVPNRYQPRQVFDKEGIQELAQTIDEHGLLQPIVIREYEPAK 69
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERRFRA K+ P I+ + + + +A+VEN+QR L+ +EEA Y +L+
Sbjct: 70 YEIIAGERRFRAMKLLQWDTAPAIVEKMSDSEAASLALVENLQRSQLSSVEEAQAYRRLM 129
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
TQ + +GKS+S VAN LR+LKL V+ I IS H R L+ ++
Sbjct: 130 DLNHLTQAALAKGMGKSQSFVANKLRLLKLIKPVQTAILDHRISERHGRALLDLNEKQQR 189
Query: 209 AQVIV--SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
A ++ + +++VR TE+ V + + + + +++ L+ +
Sbjct: 190 AMLMRVVNNRLTVRQTEDEVARLLGRPLPSEIAKQKAAARQRELSAIA 237
>gi|222152195|ref|YP_002561355.1| hypothetical protein MCCL_1952 [Macrococcus caseolyticus JCSC5402]
gi|222121324|dbj|BAH18659.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 279
Score = 84.7 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 88/272 (32%), Positives = 161/272 (59%), Gaps = 14/272 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D + + +S+ IVPN + PR F+
Sbjct: 1 MKKPFSK---------LFGLKEKEEDVEVARQ---NGNVVKVSVERIVPNRYQPRQVFDE 48
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E +++L +SI+S+G++QP++VR I+ +Y+IIAGERRFRA KM + +E VI++ +++K
Sbjct: 49 EKIKELAESIRSYGLLQPIVVRPIEEEMYEIIAGERRFRALKMNNTAETEVIVKQMNDKE 108
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ IA++EN+QR++L+ +EEA Y++L+ G TQND+ + +GKS+S +AN LR+L+L
Sbjct: 109 TAAIALIENIQRENLSAVEEAEAYKKLLDLDGITQNDLATSLGKSQSFIANKLRLLRLSQ 168
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+ + + K +IS HAR+L + + L + +I S+ ++V+ TEE V+ + +E + K
Sbjct: 169 PILDALSKHQISERHARSLLALDEAAQLQMLNIIKSQNLNVKQTEERVKRMLSGEEVKPK 228
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+R+ + + + + + + +K +
Sbjct: 229 RIGFTRDIKLAFNTIGESLKTVEKSGVKVKRK 260
>gi|297585585|ref|YP_003701365.1| parB-like partition protein [Bacillus selenitireducens MLS10]
gi|297144042|gb|ADI00800.1| parB-like partition protein [Bacillus selenitireducens MLS10]
Length = 286
Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 146/241 (60%), Gaps = 8/241 (3%)
Query: 18 IGEVNQSIDSPEKKTETI----PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
+G +Q DS E+K E E + I ++ IVPNP PR F + +E+L +++ +H
Sbjct: 9 LGLDDQQQDSDEEKVEDALIDEREEVERIQVNDIVPNPFQPRTVFNEDKIEELAETLHTH 68
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G+IQP+IVR D Y+IIAGERR+RA + VP +++ +++ + +A++EN+QR+
Sbjct: 69 GMIQPIIVRKRD-DHYEIIAGERRWRAVQTLGWETVPAVVKEMNDTKTASVALIENLQRE 127
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
+L +EEA Y++L+ +G TQ + +GK +S VAN LR+L+L V+E +++ +I+
Sbjct: 128 ELTSIEEAAAYQKLLELHGLTQESLAQRLGKGQSTVANKLRLLQLSGEVQEALKQRKITE 187
Query: 194 GHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
HAR ++ + + + ++ K+ +V+ TEE V++ +K EK+K+ S K+ L
Sbjct: 188 RHARALLSVKEETAQVKILVSVIEKEWNVKQTEEAVKKALHKPEKKKRPKVKSVSKDTRL 247
Query: 251 T 251
Sbjct: 248 A 248
>gi|289436052|ref|YP_003465924.1| chromosome partition protein, ParB family [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289172296|emb|CBH28842.1| chromosome partition protein, ParB family [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 286
Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 141/272 (51%), Gaps = 10/272 (3%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G+ ++ + E + + + I PN PR F+ + +++L ++I+ HG+I
Sbjct: 6 LFGKKEKNNQLDDNIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVI 65
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L
Sbjct: 66 QPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELT 125
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + VGKS+S +AN +R+LKLP +++ + ++IS HA
Sbjct: 126 PIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPEAIQNAVLNKQISERHA 185
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
R+L++ Q I +V+ TE +QE K+ + +
Sbjct: 186 RSLLALETEEQQVALLQEIEENHWNVKQTEARIQELLGVKKSVATKKTKPKR-----QAI 240
Query: 254 EKKISSKVGL-NISIKHRNNKGQFCIKYETNE 284
+ + + S+ + G + ++ E
Sbjct: 241 SRDVRIAMNTIKQSVTMVKDNG-MELDFKEEE 271
>gi|295707335|ref|YP_003600410.1| nucleoid occlusion protein [Bacillus megaterium DSM 319]
gi|294804994|gb|ADF42060.1| nucleoid occlusion protein [Bacillus megaterium DSM 319]
Length = 291
Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 133/234 (56%), Gaps = 3/234 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
V E + + + I + SI+PN + PR F +E+L +I +HGIIQP++
Sbjct: 20 VEIETVQDENVEKVLRDEVKQIRVSSIIPNRYQPRTVFNEAKIEELALTIHTHGIIQPIV 79
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR + Y++IAGERR+RA + VP I+++ ++ + +A++EN+QR++L +EE
Sbjct: 80 VRPTEGEEYELIAGERRWRAVQSLGWDTVPAIVKHFNDTETASVALIENLQREELTAVEE 139
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
AL Y +LI + TQ + +GK +S +AN LR+LKLP ++E I+++ I+ HAR L+
Sbjct: 140 ALAYAKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPVEIQEAIKQKLITERHARALI 199
Query: 201 STSDPLSLAQ---VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ Q I+ K+++V+ TE+ V + + K+ K + K+ +
Sbjct: 200 PLKNHEKQLQVLAEIIEKQLNVKQTEDRVVKLLETQVKKPKAKRKAFSKDTRIA 253
>gi|313640180|gb|EFS04770.1| nucleoid occlusion protein [Listeria seeligeri FSL S4-171]
Length = 286
Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 141/272 (51%), Gaps = 10/272 (3%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G+ ++ + E + + + I PN PR F+ + +++L ++I+ HG+I
Sbjct: 6 LFGKKEKNNQLDDNIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVI 65
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L
Sbjct: 66 QPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELT 125
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + VGKS+S +AN +R+LKLP +++ + ++IS HA
Sbjct: 126 PIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPEAIQNAVLNKQISERHA 185
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
R+L++ Q I +V+ TE +QE K+ + +
Sbjct: 186 RSLLALETEEQQVALLQEIEENHWNVKQTEARIQELLGVKKLVATKKTKPKR-----QAI 240
Query: 254 EKKISSKVGL-NISIKHRNNKGQFCIKYETNE 284
+ + + S+ + G + ++ E
Sbjct: 241 SRDVRIAMNTIKQSVTMVKDNG-MELDFKEEE 271
>gi|313635555|gb|EFS01768.1| nucleoid occlusion protein [Listeria seeligeri FSL N1-067]
Length = 286
Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 141/272 (51%), Gaps = 10/272 (3%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G+ ++ + E + + + I PN PR F+ + +++L ++I+ HG+I
Sbjct: 6 LFGKKEKNNQLDDNIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVI 65
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L
Sbjct: 66 QPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELT 125
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + VGKS+S +AN +R+LKLP +++ + ++IS HA
Sbjct: 126 PIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPEAIQNAVLNKQISERHA 185
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
R+L++ Q I +V+ TE +QE K+ + +
Sbjct: 186 RSLLALETEEQQVALLQEIEENHWNVKQTEARIQELLGVKKLVAAKKTKPKR-----QAI 240
Query: 254 EKKISSKVGL-NISIKHRNNKGQFCIKYETNE 284
+ + + S+ + G + ++ E
Sbjct: 241 SRDVRIAMNTIKQSVTMVKDNG-MELDFKEEE 271
>gi|169830194|ref|YP_001700352.1| hypothetical protein Bsph_4778 [Lysinibacillus sphaericus C3-41]
gi|205829234|sp|B1HPM0|NOC_LYSSC RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|168994682|gb|ACA42222.1| Protein yyaA [Lysinibacillus sphaericus C3-41]
Length = 298
Score = 84.0 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 80/223 (35%), Positives = 127/223 (56%), Gaps = 3/223 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + + + E + I IVPN PR F+ E +E+L ++I +HG+IQP+
Sbjct: 16 EPIVKNEVEQAEAVHTAEEVIKLPIDQIVPNRFQPRTIFDDEKIEELSRTIHTHGVIQPI 75
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR Y+IIAGERR+RA K +EVP I+RN+ +K + IA++EN+QR++L +E
Sbjct: 76 VVRKTSENQYEIIAGERRYRAMKKLQWTEVPAIVRNLTDKETASIALIENLQREELTAIE 135
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA+ Y++L+ + TQ + +GK +S VAN LR+L+LP V++ I + +IS HAR L
Sbjct: 136 EAVAYQKLLELHELTQEALAQRLGKGQSTVANKLRLLRLPDEVQQAILQRKISERHARAL 195
Query: 200 VSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
++ D Q V +VR EE +Q + ++
Sbjct: 196 IAIKDQPLQLEVLQQTVDNDWNVRQLEEQIQAILHPVTDEQES 238
>gi|294501984|ref|YP_003565684.1| nucleoid occlusion protein [Bacillus megaterium QM B1551]
gi|294351921|gb|ADE72250.1| nucleoid occlusion protein [Bacillus megaterium QM B1551]
Length = 291
Score = 84.0 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 133/234 (56%), Gaps = 3/234 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
V E + + + I + SI+PN + PR F +E+L +I +HGIIQP++
Sbjct: 20 VEIETVQDENVEKVLRDEVKQIRVSSIIPNRYQPRTVFNEAKIEELALTIHTHGIIQPIV 79
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR + Y++IAGERR+RA + VP I+++ ++ + +A++EN+QR++L +EE
Sbjct: 80 VRPTEGEEYELIAGERRWRAVQSLGWDTVPAIVKHFNDTETASVALIENLQREELTAVEE 139
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
AL Y +LI + TQ + +GK +S +AN LR+LKLP ++E I+++ I+ HAR L+
Sbjct: 140 ALAYAKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPVEIQEAIKQKLITERHARALI 199
Query: 201 STSDPLSLAQ---VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ Q I+ K+++V+ TE+ V + + K+ K + K+ +
Sbjct: 200 PLKNQEKQLQVLAEIIEKQLNVKQTEDRVVKLLETQVKKPKAKRKAFSKDTRIA 253
>gi|212640674|ref|YP_002317194.1| ParB family protein [Anoxybacillus flavithermus WK1]
gi|212562154|gb|ACJ35209.1| ParB family protein [Anoxybacillus flavithermus WK1]
Length = 296
Score = 84.0 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 142/239 (59%), Gaps = 3/239 (1%)
Query: 26 DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID 85
+ +++ E I+I IVPN PR F + +++L Q+I++HG+IQP++VR +
Sbjct: 26 EKEQEEMVIPNEEIKRIAISQIVPNRFQPRTIFVEDKIDELAQTIRTHGMIQPIVVRECE 85
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
+G ++IIAGERR+RAA+ +++P II+N+++ + +A++EN+QR++L P+EEA+ Y
Sbjct: 86 DGKFEIIAGERRWRAAQKLGWTDIPAIIKNLNDTETASVALIENLQREELTPIEEAIAYA 145
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+L+ + TQ + +GK +S +AN LR+LKLP V++ + + +I+ HAR L+ D
Sbjct: 146 RLLELHHLTQEALAQRLGKGQSTIANKLRLLKLPQEVQDALLQRQITERHARALIVLKDY 205
Query: 206 LSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
+ I+ K+++V+ TE+ V + + + K+ + K + I +
Sbjct: 206 DKQLKLLEEIIQKQLNVKQTEDRVAKMLEESDDEKRPKPKRKSLSKDMRIAVNTIRQSL 264
>gi|254702354|ref|ZP_05164182.1| DNA polymerase III subunit delta [Brucella suis bv. 5 str. 513]
Length = 160
Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 69/157 (43%), Positives = 95/157 (60%)
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA+GY+QLI + YTQND+ ++GKSRSHVAN LR+LKLP V++ I +S GHAR+
Sbjct: 4 EEAMGYQQLIDNHDYTQNDLAQVIGKSRSHVANTLRLLKLPQRVQDFIVDGALSAGHARS 63
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
L++T +P +LA+ IV + +SVR E LVQ + + K EK+ LEK +S
Sbjct: 64 LITTENPTALAERIVKEGLSVRQVEALVQAEARGGSEAKPGKAAPAEKDADTKALEKLLS 123
Query: 259 SKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
G+ + I HR G I+Y + EQL IC L
Sbjct: 124 DVTGMKVEINHRERGGDVKIRYSSLEQLDEICRRLQS 160
>gi|328958781|ref|YP_004376167.1| DNA-binding protein Spo0J-like protein [Carnobacterium sp. 17-4]
gi|328675105|gb|AEB31151.1| DNA-binding protein Spo0J-like protein [Carnobacterium sp. 17-4]
Length = 289
Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 83/287 (28%), Positives = 145/287 (50%), Gaps = 29/287 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTE-----TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQ 68
L+ L G + + + I++ IVPN PR F E L++L +
Sbjct: 3 LSDLFGSGKSKKKTESGEDVLLEVLKKQKHVQEIAVQQIVPNRFQPRKVFNEEKLDELAR 62
Query: 69 SIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
+I HG+IQP+I+R + Y+I+AGERRFRA ++ EVP I++ + + + +A++E
Sbjct: 63 TIHIHGLIQPIILRKYEENKYEIVAGERRFRAMQLLEWKEVPAIVQELSDNETASVALIE 122
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
N+QR++L +EEA Y+ L++ TQ + +GKS+S +AN LR+LKL ++E +
Sbjct: 123 NLQREELTAIEEAEAYQGLMALNELTQEALAQRIGKSQSFIANKLRLLKLAEPLKEALLN 182
Query: 189 EEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQ---DNKKEKRKKIFEGS 243
I+ H R++ +S + L VI+ KK++V++TE LV+++ N +++ K
Sbjct: 183 RTITERHGRSVLALSCEEQSKLLNVIIEKKLTVKETERLVKQKVAEKNNTQEQPKKRIRK 242
Query: 244 REKEKY-------------------LTDLEKKISSKVGLNISIKHRN 271
K+ L +E+ + + I IK
Sbjct: 243 ISKDLRLALNTINKSVELIKETGMPLEAIEEDLEDVYRITIEIKKDK 289
>gi|163943161|ref|YP_001648045.1| parB-like partition protein [Bacillus weihenstephanensis KBAB4]
gi|229014647|ref|ZP_04171761.1| Nucleoid occlusion protein [Bacillus mycoides DSM 2048]
gi|229065140|ref|ZP_04200433.1| Nucleoid occlusion protein [Bacillus cereus AH603]
gi|229136306|ref|ZP_04265053.1| Nucleoid occlusion protein [Bacillus cereus BDRD-ST196]
gi|229170184|ref|ZP_04297870.1| Nucleoid occlusion protein [Bacillus cereus AH621]
gi|205829233|sp|A9VTL7|NOC_BACWK RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|163865358|gb|ABY46417.1| parB-like partition protein [Bacillus weihenstephanensis KBAB4]
gi|228613285|gb|EEK70424.1| Nucleoid occlusion protein [Bacillus cereus AH621]
gi|228647178|gb|EEL03266.1| Nucleoid occlusion protein [Bacillus cereus BDRD-ST196]
gi|228716169|gb|EEL67888.1| Nucleoid occlusion protein [Bacillus cereus AH603]
gi|228746658|gb|EEL96547.1| Nucleoid occlusion protein [Bacillus mycoides DSM 2048]
Length = 290
Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 80/275 (29%), Positives = 145/275 (52%), Gaps = 22/275 (8%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +E+L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIAKKVYEEIQEIPIVNITPNRYQPRTVFDDARIEELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S VAN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTVANKLRLLKLPEEIKSALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK------- 248
L + L + Q IV K+++V+ TEE + + + + ++K + + ++
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEVKPKRKAKQKAVSRDARIAMNTI 255
Query: 249 ------------YLTDLEKKISSKVGLNISIKHRN 271
+ E++ + I I +
Sbjct: 256 RQSLQMVANSGLNVNSAEEEFDEYYQITIKIPKKK 290
>gi|194467504|ref|ZP_03073491.1| parB-like partition protein [Lactobacillus reuteri 100-23]
gi|194454540|gb|EDX43437.1| parB-like partition protein [Lactobacillus reuteri 100-23]
Length = 322
Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 72/233 (30%), Positives = 125/233 (53%), Gaps = 2/233 (0%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ ++ + I I+PN + PR F+ +G+ +L Q+I HG++QP+++R +
Sbjct: 10 KNNSDNTKNKVVEVKIDQIIPNRYQPRKVFDQDGIRELAQTIDEHGLLQPIVLREYEPAK 69
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERR+RA K+ + P II + ++ + +A++EN+QR L+ +EEA Y QL+
Sbjct: 70 YEIIAGERRYRAMKLLKWEKAPAIIEKMSDQETASLALIENLQRSQLSSVEEAQAYRQLM 129
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS--TSDPL 206
TQ+ + +GKS+S VAN LR+L+L + V+ I I+ H R L+
Sbjct: 130 DLNHLTQSQLAKGMGKSQSFVANKLRLLRLITPVQTAILDHRITERHGRALLDLGEKQQR 189
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS 259
+ IV+++++VR TE+ V + + + K K L +E
Sbjct: 190 DMLMRIVNERLTVRQTEDEVARLLGRPLPSEIAELKAAAKRKELASIEDHAEE 242
>gi|282852934|ref|ZP_06262275.1| ParB-like protein [Lactobacillus gasseri 224-1]
gi|282556042|gb|EFB61663.1| ParB-like protein [Lactobacillus gasseri 224-1]
Length = 113
Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S KR LGRGL AL E Q ++ E I + I PNP+ PR F+++
Sbjct: 5 SKEPKKRGLGRGLEALFDESPQVQETEE---------ITEIPLDEIRPNPYQPRKTFDNK 55
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
L++L +SIK +G+ QP+I+R Y+IIAGERRFRA+K+A +
Sbjct: 56 SLKELSESIKENGVFQPIIIRK-SVNGYEIIAGERRFRASKLAKKEQFQ 103
>gi|227543812|ref|ZP_03973861.1| stage 0 DNA-binding protein [Lactobacillus reuteri CF48-3A]
gi|300908880|ref|ZP_07126343.1| chromosome partitioning protein SpoOJ [Lactobacillus reuteri
SD2112]
gi|227186189|gb|EEI66260.1| stage 0 DNA-binding protein [Lactobacillus reuteri CF48-3A]
gi|300894287|gb|EFK87645.1| chromosome partitioning protein SpoOJ [Lactobacillus reuteri
SD2112]
Length = 322
Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 126/233 (54%), Gaps = 2/233 (0%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ ++ + I I+PN + PR F+ +G+ +L Q+I HG++QP+++R +
Sbjct: 10 KNNSDNTKNKVVEVKIDQIIPNRYQPRKVFDQDGIRELAQTIDEHGLLQPIVLREYEPAK 69
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERR+RA K+ + P II + ++ + +A++EN+QR L+P+EEA Y QL+
Sbjct: 70 YEIIAGERRYRAMKLLKWEKAPAIIEKMSDQETASLALIENLQRSQLSPVEEAQAYRQLM 129
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPL 206
TQ+ + +GKS+S VAN LR+L+L + V+ I I+ H R L +
Sbjct: 130 DLNHLTQSQLAKGMGKSQSFVANKLRLLRLITPVQTAILDHRITERHGRALLDLDEKQQR 189
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS 259
+ IV+++++VR TE+ V + + + K K L +E
Sbjct: 190 DMLMRIVNERLTVRQTEDEVARLLGRPLPSEIAELKAAAKRKELASIEDHAEE 242
>gi|299541773|ref|ZP_07052096.1| hypothetical protein BFZC1_22524 [Lysinibacillus fusiformis ZC1]
gi|298725511|gb|EFI66152.1| hypothetical protein BFZC1_22524 [Lysinibacillus fusiformis ZC1]
Length = 299
Score = 83.6 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 77/224 (34%), Positives = 127/224 (56%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E + + + E + I IVPN PR F+ E +E+L ++I +HG+IQP+
Sbjct: 16 EPIVKNEVEQAEAVHAAEEVIKLPIDQIVPNRFQPRTIFDDEKIEELSRTIHTHGVIQPI 75
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + Y+IIAGERR+RA K +EVP I+RN+ +K + IA++EN+QR++L +E
Sbjct: 76 VVRKTSDNQYEIIAGERRYRAMKKLQWTEVPAIVRNLTDKETASIALIENLQREELTAIE 135
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA+ Y++L+ + TQ + +GK +S VAN LR+L+LP V++ I K +IS HAR L
Sbjct: 136 EAVAYQKLLELHELTQEALAQRLGKGQSTVANKLRLLRLPDEVQQAILKRKISERHARAL 195
Query: 200 VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
++ D +++ + + +L ++ E S
Sbjct: 196 IAIKDQPLQLEILQLAIENDWNVRQLEEQIQAILHPVADEQEES 239
>gi|154688204|ref|YP_001423365.1| YyaA [Bacillus amyloliquefaciens FZB42]
gi|205829229|sp|A7ZAV8|NOC_BACA2 RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|154354055|gb|ABS76134.1| YyaA [Bacillus amyloliquefaciens FZB42]
Length = 283
Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 75/238 (31%), Positives = 135/238 (56%), Gaps = 4/238 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
G + + + +T E I +H+IVPN PR F E +++L +I +HGIIQ
Sbjct: 9 FGFGEKEEEPEIAEHDTNKEEILEIPVHAIVPNRFQPRTIFSDEKIKELAMTIHTHGIIQ 68
Query: 78 PLIV-RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
P++V D G Y++IAGERR+RA + ++P II++ + + +A++EN+QR++L+
Sbjct: 69 PIVVRHTEDEGQYELIAGERRWRAVQTLEWEKIPAIIKDFSDTETASVALIENLQREELS 128
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
+EEA Y +L+ + TQ + +GK +S +AN LR+LKLP V++ I +++I+ HA
Sbjct: 129 SIEEAHAYARLLELHDLTQEALAQRLGKGQSTIANKLRLLKLPEPVQDAIMEKKITERHA 188
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
R L+ P I+ K ++V+ TE+ V + + +++ K + ++ +
Sbjct: 189 RALIPLKQPEFQVTLLAEIIEKSLNVKQTEDRVVKMLEQNKQKPKPRRKAFSRDTRIA 246
>gi|254696306|ref|ZP_05158134.1| parB-like partition protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260760677|ref|ZP_05873020.1| chromosome partitioning protein PARB [Brucella abortus bv. 2 str.
86/8/59]
gi|261752917|ref|ZP_05996626.1| chromosome partitioning protein ParB [Brucella suis bv. 5 str. 513]
gi|260671109|gb|EEX57930.1| chromosome partitioning protein PARB [Brucella abortus bv. 2 str.
86/8/59]
gi|261742670|gb|EEY30596.1| chromosome partitioning protein ParB [Brucella suis bv. 5 str. 513]
Length = 154
Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 66/154 (42%), Positives = 92/154 (59%)
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+GY+QLI + YTQND+ ++GKSRSHVAN LR+LKLP V++ I +S GHAR+L++
Sbjct: 1 MGYQQLIDNHDYTQNDLAQVIGKSRSHVANTLRLLKLPQRVQDFIVDGALSAGHARSLIT 60
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
T +P +LA+ IV + +SVR E LVQ + + K EK+ LEK +S
Sbjct: 61 TENPTALAERIVKEGLSVRQVEALVQAEARGGSEAKPGKAAPAEKDADTKALEKLLSDVT 120
Query: 262 GLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
G+ + I HR G I+Y + EQL IC L
Sbjct: 121 GMKVEINHRERGGDVKIRYSSLEQLDEICRRLQS 154
>gi|302390788|ref|YP_003826609.1| ParB family protein [Thermosediminibacter oceani DSM 16646]
gi|302201416|gb|ADL08986.1| ParB family protein [Thermosediminibacter oceani DSM 16646]
Length = 266
Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 128/214 (59%), Gaps = 3/214 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
I + +I PNP+ PR F+ E L +L SIK +G++QP++VR + LY++IAGE
Sbjct: 6 KSEVINIPVDAIKPNPYQPRKNFDDESLRELTDSIKVYGVLQPIVVRRVGKNLYELIAGE 65
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RA + A L E+P I+R+ + IA++EN+QR++L+ LEEA GY QL+ E+G TQ
Sbjct: 66 RRWRACQKAGLKEIPAIVRDTKETDTAIIALIENLQRENLSFLEEAEGYRQLMYEHGLTQ 125
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVI 212
+ +GKS+S +AN +R+LK+P + ++I +E ++ HAR L + +
Sbjct: 126 EQLAERLGKSQSTIANKVRLLKMPEDILKVISRENLTERHARALLKLPDEKLQREVLNKV 185
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
V K ++VR TEELV + K + + K
Sbjct: 186 VEKGLNVRQTEELVDKTLEKIQAKTDTKRKKTLK 219
>gi|329942375|ref|ZP_08291185.1| parB-like partition s domain protein [Chlamydophila psittaci Cal10]
gi|332287017|ref|YP_004421918.1| putative chromosome partitioning protein [Chlamydophila psittaci
6BC]
gi|313847613|emb|CBY16601.1| putative chromosome partitioning protein [Chlamydophila psittaci
RD1]
gi|325507204|gb|ADZ18842.1| putative chromosome partitioning protein [Chlamydophila psittaci
6BC]
gi|328815285|gb|EGF85273.1| parB-like partition s domain protein [Chlamydophila psittaci Cal10]
gi|328914248|gb|AEB55081.1| spoOJ protein [Chlamydophila psittaci 6BC]
Length = 279
Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 74/254 (29%), Positives = 149/254 (58%), Gaps = 11/254 (4%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG----LYKII 92
++ ++I +I +P PR F L++L S+KS G+I P +VR I +G Y++I
Sbjct: 8 DTIIEVAIDNIRVSPFQPRRVFSESELQELVASLKSVGLIHPPVVREIRSGDRVLYYELI 67
Query: 93 AGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
AGERR+RA ++A + +PV+ + V + + E ++EN+QR +L+P+E A +++LI+ +
Sbjct: 68 AGERRWRALQLAGYTAIPVVLKQVVADDIAAEATLIENIQRVNLSPMEMAEAFKKLINVF 127
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL--- 208
G TQ+ + VGK RS VAN LR+ L S+++ + EI+LGHA+ +++ DP
Sbjct: 128 GLTQDKVALRVGKKRSTVANYLRLFSLSESIQKSLYLGEITLGHAKVILTLEDPNLREIL 187
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE---GSREKEKYLTDLEKKISSKVGLNI 265
A+ I+S++++VR+ E+ ++ + + + + + + ++++++S +G +
Sbjct: 188 AEKIISQRLAVREAEQEAKKLLSGEVVTTRASKEQVKACATSSHYHEMQERLSQSLGYKV 247
Query: 266 SIKHRNNKGQFCIK 279
++K + + +
Sbjct: 248 TVKSQGSHYSVSLH 261
>gi|295402130|ref|ZP_06812089.1| parB-like partition protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|312112749|ref|YP_003991065.1| parB-like partition protein [Geobacillus sp. Y4.1MC1]
gi|294975813|gb|EFG51432.1| parB-like partition protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217850|gb|ADP76454.1| parB-like partition protein [Geobacillus sp. Y4.1MC1]
Length = 280
Score = 83.2 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 43 SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAK 102
+ I+PN PR F+ E +E+L +I +HGIIQP++VR ++G ++IIAGERR+RA +
Sbjct: 31 PVSKIIPNRFQPRTIFDEEKIEELALTIHTHGIIQPIVVRECEDGKFEIIAGERRWRAVQ 90
Query: 103 MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
SE+P I++N+++K + +A++EN+QR++L P+EEA+ Y +L+ + TQ + +
Sbjct: 91 KLGWSEIPAIVKNLNDKETASVALIENLQREELTPIEEAMAYAKLLELHNLTQEALAQRL 150
Query: 163 GKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSV 219
GK +S +AN LR+LKLP V+E + + I+ HAR L+ D + I+ K+++V
Sbjct: 151 GKGQSTIANKLRLLKLPQEVQEALLQRTITERHARALIVLKDKEKQLKLLREIIEKQLNV 210
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ TE+ V + ++ K + K+ +
Sbjct: 211 KQTEDRVLKMLESMNRKPKPKRKAFSKDMRIA 242
>gi|148543344|ref|YP_001270714.1| effector of nucleoid occlusion Noc [Lactobacillus reuteri DSM
20016]
gi|184152754|ref|YP_001841095.1| chromosome partitioning protein ParB [Lactobacillus reuteri JCM
1112]
gi|227364418|ref|ZP_03848508.1| stage 0 DNA-binding protein [Lactobacillus reuteri MM2-3]
gi|325683617|ref|ZP_08163133.1| chromosome partitioning protein SpoOJ [Lactobacillus reuteri
MM4-1A]
gi|148530378|gb|ABQ82377.1| Effector of nucleoid occlusion Noc [Lactobacillus reuteri DSM
20016]
gi|183224098|dbj|BAG24615.1| chromosome partitioning protein ParB [Lactobacillus reuteri JCM
1112]
gi|227070511|gb|EEI08844.1| stage 0 DNA-binding protein [Lactobacillus reuteri MM2-3]
gi|324977967|gb|EGC14918.1| chromosome partitioning protein SpoOJ [Lactobacillus reuteri
MM4-1A]
Length = 322
Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 72/230 (31%), Positives = 125/230 (54%), Gaps = 2/230 (0%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ ++ + I I+PN + PR F+ +G+ +L Q+I HG++QP+++R +
Sbjct: 10 KNNSDNTKNKVVEVKIDQIIPNRYQPRKVFDQDGIRELAQTIDEHGLLQPIVLREYEPTK 69
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERR+RA K+ + P II + ++ + +A++EN+QR L+ +EEA Y QL+
Sbjct: 70 YEIIAGERRYRAMKLLKWEKAPAIIEKMSDQETASLALIENLQRSQLSSVEEAQAYRQLM 129
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPL 206
TQ+ + +GKS+S VAN LR+L+L + V+ I I+ H R L +
Sbjct: 130 DLNHLTQSQLAKGMGKSQSFVANKLRLLRLITPVQTAILDHRITERHGRALLDLDEKQQR 189
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ IV+++++VR TE+ V + + + K K L +E
Sbjct: 190 DMLMRIVNERLTVRQTEDEVARLLGRPLPSEIAELKAAAKRKELASIEDH 239
>gi|308175806|ref|YP_003922511.1| DNA-binding protein Spo0J-like Noc [Bacillus amyloliquefaciens DSM
7]
gi|307608670|emb|CBI45041.1| DNA-binding protein Spo0J-like Noc [Bacillus amyloliquefaciens DSM
7]
gi|328555782|gb|AEB26274.1| DNA-binding protein Spo0J-like Noc [Bacillus amyloliquefaciens
TA208]
gi|328914171|gb|AEB65767.1| DNA-binding protein Spo0J-like Noc [Bacillus amyloliquefaciens LL3]
Length = 283
Score = 82.8 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 75/238 (31%), Positives = 135/238 (56%), Gaps = 4/238 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
G + + + +T E I +H+IVPN PR F E +++L +I +HGIIQ
Sbjct: 9 FGFGEKEEEPEIAEHDTNKEEILEIPVHAIVPNRFQPRTIFSDEKIKELAMTIHTHGIIQ 68
Query: 78 PLIV-RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
P++V D G Y++IAGERR+RA + ++P II++ + + +A++EN+QR++L+
Sbjct: 69 PIVVRHTEDEGQYELIAGERRWRAVQTLEWEKIPAIIKDFSDTETASVALIENLQREELS 128
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
+EEA Y +L+ + TQ + +GK +S +AN LR+LKLP V++ I +++I+ HA
Sbjct: 129 SIEEAHAYARLLELHDLTQEALAQRLGKGQSTIANKLRLLKLPEPVQDAIMEKKITERHA 188
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
R L+ P I+ K ++V+ TE+ V + + +++ K + ++ +
Sbjct: 189 RALIPLKQPELQVTLLAEIIEKSLNVKQTEDRVVKMLEQNKQKPKPRRKAFSRDTRIA 246
>gi|161508051|ref|YP_001578018.1| chromosome partitioning protein [Lactobacillus helveticus DPC 4571]
gi|160349040|gb|ABX27714.1| Chromosome partitioning protein [Lactobacillus helveticus DPC 4571]
Length = 279
Score = 82.8 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 76/260 (29%), Positives = 139/260 (53%), Gaps = 16/260 (6%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + + IVPN + PR F + +++L ++ G++QP++VR + Y+IIAGE
Sbjct: 16 NKQIQDLKLDKIVPNQYQPRRQFSDDSIKELADTLDQDGLLQPIVVREDGDDHYEIIAGE 75
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK +P I++N+++ + +A++EN+QR+DLNP++EA Y L+ TQ
Sbjct: 76 RRYRAAKSLGWETIPAIVKNMNDDQAASLALIENLQREDLNPIDEAKAYTNLMKLNDLTQ 135
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS--DPLSLAQVIV 213
+ +GKS+S+VAN LR+LKL V+ + + +I+ H R L++ D + +
Sbjct: 136 TALAKDMGKSQSYVANKLRLLKLDDDVQTALVEGKITARHGRALLNLDAADQKRVLAEVE 195
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK------------EKYLTDLEKKISSKV 261
+K ++V+ TEE+ ++ D + K E + +K + K++
Sbjct: 196 AKGLNVKQTEEIAKDVDAYFNPQPKKKEKAEQKRVVNRIPKDLKVQINTIKKAVKLAKNS 255
Query: 262 GLNISIKHRNN--KGQFCIK 279
G+ + IK N + I+
Sbjct: 256 GIKVKIKEDKNPDDYKITIE 275
>gi|226315523|ref|YP_002775419.1| nucleoid occlusion protein [Brevibacillus brevis NBRC 100599]
gi|226098473|dbj|BAH46915.1| nucleoid occlusion protein [Brevibacillus brevis NBRC 100599]
Length = 285
Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 72/223 (32%), Positives = 127/223 (56%), Gaps = 4/223 (1%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
+T E I + IVPNP+ PR F+ E +++LCQ+I++HG+IQP++VR D Y++I
Sbjct: 16 KTDNEEIKQIPVEEIVPNPYQPRTVFDDEKIDELCQTIRTHGLIQPIVVRVRDGR-YELI 74
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR RA + + +P I++ ++ + IA++EN+QR+ L +EEA+ Y++LI +
Sbjct: 75 AGERRLRATRKLGMERIPAIVKEFNDSQTASIALIENLQREGLTAIEEAVAYQKLIDLHN 134
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLA 209
TQ + +GK +S +AN LR+L LP +++ + +++ HAR L +
Sbjct: 135 LTQESLAQRLGKGQSTIANKLRLLHLPQGIQDALLSRQVTERHARALIPLKDPELQNKVL 194
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
I+ ++ +V+ TE V++ E K + + + D
Sbjct: 195 LEILEREWNVKQTEVRVKQLLELAENPKSEKDAKPRWKAFSRD 237
>gi|20809121|ref|NP_624292.1| transcriptional regulator [Thermoanaerobacter tengcongensis MB4]
gi|254479392|ref|ZP_05092725.1| ParB-like nuclease domain family protein [Carboxydibrachium
pacificum DSM 12653]
gi|20517800|gb|AAM25896.1| predicted Transcriptional regulator [Thermoanaerobacter
tengcongensis MB4]
gi|214034661|gb|EEB75402.1| ParB-like nuclease domain family protein [Carboxydibrachium
pacificum DSM 12653]
Length = 268
Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 139/212 (65%), Gaps = 3/212 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ I +I PNP+ PR F+ E LE+L +SIK +G++QP+ VR + N Y+++AGERR
Sbjct: 8 EIVYLPIEAIRPNPYQPRKTFDIENLEELAESIKIYGVLQPITVRMVGNNSYELVAGERR 67
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
+RA+K+A L EVP I+ N ++ S ++++EN+QR++LN +EEA Y LI+++ TQ
Sbjct: 68 WRASKLAGLKEVPAIVINAHDQDSAILSLIENLQRENLNFIEEAQAYYNLINDHHLTQEQ 127
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVS 214
+ ++GKS+S +AN LRILKL ++E + + +++ HAR L + +VIV
Sbjct: 128 LAKVLGKSQSTIANKLRILKLSKEIQEKLLENDLTERHARALLRLPDEELQKKVLEVIVK 187
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
KK++V TE+LVQE +K KR ++ + + +K
Sbjct: 188 KKLNVSQTEKLVQEMIDKITKRPEVSQKNGKK 219
>gi|319891296|ref|YP_004148171.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Staphylococcus pseudintermedius
HKU10-03]
gi|317160992|gb|ADV04535.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Staphylococcus pseudintermedius
HKU10-03]
gi|323465551|gb|ADX77704.1| chromosome partioning protein, ParB family [Staphylococcus
pseudintermedius ED99]
Length = 283
Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 148/264 (56%), Gaps = 14/264 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G N+ D T+ + I+I IVPN + PR F++
Sbjct: 1 MKKPFSK---------LFGLKNK--DDLLTVTDEDKKGVQSINIEKIVPNRYQPRQKFDT 49
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+E+L +SI++HG++QP++VR I+ +Y+IIAGERRFRA +M +++ V++R++D++
Sbjct: 50 ARIEELAESIRAHGLLQPIVVRPIEENMYEIIAGERRFRALQMNQMTDAEVLVRHLDDEE 109
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L++ G TQ ++ VGKS+S +AN LR+LKL
Sbjct: 110 TAVVALIENIQRENLSAVEEAEAYKKLLAFEGITQAELAKSVGKSQSFIANKLRLLKLTP 169
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQ---VIVSKKMSVRDTEELVQEQDNKKEKRK 237
V E +R+ +I+ HAR LV + ++ + + E L +
Sbjct: 170 VVLEAVREHQITERHARALVGQTPEFQEEMLGVILKEQLNVKQTEERLKATTVKDDVVEE 229
Query: 238 KIFEGSREKEKYLTDLEKKISSKV 261
K+ E + +++ I+ +
Sbjct: 230 KVVARPPEFAQDVSEARDIIADSL 253
>gi|312868968|ref|ZP_07729148.1| nucleoid occlusion protein [Lactobacillus oris PB013-T2-3]
gi|311095532|gb|EFQ53796.1| nucleoid occlusion protein [Lactobacillus oris PB013-T2-3]
Length = 324
Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 124/228 (54%), Gaps = 2/228 (0%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ + + + + IVPN + PR F+ EG+++L Q+I HG++QP+++R +
Sbjct: 10 KSDSNDSKQKVVEVKLDQIVPNRYQPRQVFDKEGIQELAQTIDEHGLLQPIVIREYEPAK 69
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERRFRA K+ P II + + + +A+VEN+QR L+ +EEA Y +L+
Sbjct: 70 YEIIAGERRFRAMKLLQWETAPAIIEKMSDHEAASLALVENLQRSQLSSVEEAQAYRRLM 129
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPL 206
TQ + +GKS+S VAN LR+LKL V+ I IS H R + ++
Sbjct: 130 DLNHLTQAALAKGMGKSQSFVANKLRLLKLIKPVQTAILDHRISERHGRAMLDLNEKQQR 189
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
+ IV+ +++VR TE+ V + + + + +++ L+ +
Sbjct: 190 EMLMRIVNNRLTVRQTEDEVARLLGRPLPSEIAKQKAAARQRELSKIA 237
>gi|229176157|ref|ZP_04303649.1| Nucleoid occlusion protein [Bacillus cereus MM3]
gi|228607316|gb|EEK64646.1| Nucleoid occlusion protein [Bacillus cereus MM3]
Length = 290
Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 145/275 (52%), Gaps = 22/275 (8%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +E+L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIEELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKRALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK------- 248
L + L + Q IV K+++V+ TEE + + + + ++K + + ++
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEAKPKRKAKQKAVSRDTRIAMNTI 255
Query: 249 ------------YLTDLEKKISSKVGLNISIKHRN 271
+ E++ + I I +
Sbjct: 256 RQSLQMVADSGLNVNSAEEEFDEYYQITIKIPKKK 290
>gi|313902793|ref|ZP_07836190.1| parB-like partition protein [Thermaerobacter subterraneus DSM
13965]
gi|313466913|gb|EFR62430.1| parB-like partition protein [Thermaerobacter subterraneus DSM
13965]
Length = 324
Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 124/229 (54%), Gaps = 3/229 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
E +S + + I + I PNP PR F+ L +L +SI+ G++QPL
Sbjct: 15 EDGRSRPAAAAGDGPPGGTVRRIRLADIRPNPFQPRVEFDEGSLAELAESIRRVGLLQPL 74
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + G Y+++AGERR+RAA++A L EVP ++R + ++ + +A+VEN+QR+DL E
Sbjct: 75 LVRPVPGGGYELVAGERRWRAARLAGLDEVPALVRPMGDQDAAVLALVENLQREDLGFFE 134
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR---KEEISLGHA 196
EA Y+ L+ +G TQ + +++G+ +S VAN LR+L+LP +R+ I E
Sbjct: 135 EAAAYQDLLQRFGLTQEQLAAMLGRQQSTVANKLRLLRLPVGLRQRIVAAGMSERHARAL 194
Query: 197 RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
L + + L ++ ++ + SVR EE VQ + R
Sbjct: 195 LRLPTPEEQERLLELAIAGQWSVRQLEEEVQRALAAGRAEPPVRRRKRR 243
>gi|52145289|ref|YP_086746.1| stage 0 sporulation protein J [Bacillus cereus E33L]
gi|81685205|sp|Q630C1|NOC_BACCZ RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|51978758|gb|AAU20308.1| stage 0 sporulation protein J [Bacillus cereus E33L]
Length = 290
Score = 82.4 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +E+L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIEELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKNALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERITKLLEEAKPKRKAKQKAVSRDTRIA 251
>gi|328464355|gb|EGF35767.1| chromosome partitioning protein [Lactobacillus helveticus MTCC
5463]
Length = 279
Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 76/260 (29%), Positives = 139/260 (53%), Gaps = 16/260 (6%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + + IVPN + PR F + +++L ++ G++QP++VR + Y+IIAGE
Sbjct: 16 NKQIQDLELDKIVPNQYQPRRQFSDDSIKELADTLDQDGLLQPIVVREDGDDHYEIIAGE 75
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK +P I++N+++ + +A++EN+QR+DLNP++EA Y L+ TQ
Sbjct: 76 RRYRAAKSLGWETIPAIVKNMNDDQAASLALIENLQREDLNPIDEAKAYTNLMKLNDLTQ 135
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS--DPLSLAQVIV 213
+ +GKS+S+VAN LR+LKL V+ + + +I+ H R L++ D + +
Sbjct: 136 TALAKDMGKSQSYVANKLRLLKLDDDVQTALVEGKITARHGRALLNLDVADQKRVLAEVE 195
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK------------EKYLTDLEKKISSKV 261
+K ++V+ TEE+ ++ D + K E + +K + K++
Sbjct: 196 AKGLNVKQTEEIAKDVDAYFNPQPKKKEKAEQKRVVNRIPKDFKVQINTIKKAVKLAKDS 255
Query: 262 GLNISIKHRNN--KGQFCIK 279
G+ + IK N + I+
Sbjct: 256 GIKVKIKEDKNPDDYKITIE 275
>gi|261368856|ref|ZP_05981739.1| protein YyaA [Subdoligranulum variabile DSM 15176]
gi|282569042|gb|EFB74577.1| protein YyaA [Subdoligranulum variabile DSM 15176]
Length = 312
Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 62/218 (28%), Positives = 112/218 (51%), Gaps = 2/218 (0%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+K P + I SI P+P+ R F+ + L SI +G++QP+ VR +
Sbjct: 2 SRKEPQKPGRVLLLPIDSIEPSPYQARTAFDEPEIAALAVSILQNGLLQPVSVRRVGLRK 61
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+++AGERR RA ++A L ++P I+ + D+ S + ++EN+QR L+P + A G +++I
Sbjct: 62 YQLVAGERRLRACRLAKLEKIPAILADFDDSESAALGLLENLQRSQLDPFDTARGIKEVI 121
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
+G TQ + +G S+ +AN LR+L L +++ +S HAR ++ +
Sbjct: 122 RLWGCTQAEAARRLGLSQPALANKLRLLTLTPEQQDLCTANHLSERHARAVLRLPEGRRT 181
Query: 209 A--QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
A + I +SVR ++LV+ + +
Sbjct: 182 AALEKIARDNLSVRQADKLVESMLAAPKGPSPCRKTIP 219
>gi|229112894|ref|ZP_04242425.1| Nucleoid occlusion protein [Bacillus cereus Rock1-15]
gi|228670573|gb|EEL25886.1| Nucleoid occlusion protein [Bacillus cereus Rock1-15]
Length = 290
Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 78/275 (28%), Positives = 146/275 (53%), Gaps = 22/275 (8%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +++L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIDELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKSALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK------- 248
L + L + Q IV K+++V+ TEE + + + + ++K + + ++
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEAKPKRKAKQKAVSRDTRIAMNTI 255
Query: 249 ------------YLTDLEKKISSKVGLNISIKHRN 271
+ +E++ + I I +
Sbjct: 256 RQSLQMVTESGLNVNSVEEEFDEYYQITIKIPKKK 290
>gi|42784677|ref|NP_981924.1| stage 0 sporulation protein J, putative [Bacillus cereus ATCC
10987]
gi|228988709|ref|ZP_04148794.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229159041|ref|ZP_04287097.1| Nucleoid occlusion protein [Bacillus cereus ATCC 4342]
gi|81408276|sp|Q72WU6|NOC_BACC1 RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|42740609|gb|AAS44532.1| stage 0 sporulation protein J, putative [Bacillus cereus ATCC
10987]
gi|228624460|gb|EEK81231.1| Nucleoid occlusion protein [Bacillus cereus ATCC 4342]
gi|228771021|gb|EEM19502.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|324329432|gb|ADY24692.1| stage 0 sporulation protein J, putative [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 290
Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +E+L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIEELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKNALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEAKPKRKAKQKAVSRDTRIA 251
>gi|206975860|ref|ZP_03236771.1| putative stage 0 sporulation protein J [Bacillus cereus H3081.97]
gi|217962973|ref|YP_002341551.1| putative stage 0 sporulation protein J [Bacillus cereus AH187]
gi|222098958|ref|YP_002533016.1| stage 0 sporulation protein j [Bacillus cereus Q1]
gi|229142230|ref|ZP_04270754.1| Nucleoid occlusion protein [Bacillus cereus BDRD-ST26]
gi|229199695|ref|ZP_04326338.1| Nucleoid occlusion protein [Bacillus cereus m1293]
gi|254767656|sp|B7HZG7|NOC_BACC7 RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|254767657|sp|B9IT39|NOC_BACCQ RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|206745954|gb|EDZ57350.1| putative stage 0 sporulation protein J [Bacillus cereus H3081.97]
gi|217065798|gb|ACJ80048.1| putative stage 0 sporulation protein J [Bacillus cereus AH187]
gi|221243017|gb|ACM15727.1| stage 0 sporulation protein J [Bacillus cereus Q1]
gi|228583790|gb|EEK41965.1| Nucleoid occlusion protein [Bacillus cereus m1293]
gi|228641248|gb|EEK97555.1| Nucleoid occlusion protein [Bacillus cereus BDRD-ST26]
Length = 290
Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +E+L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIEELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDEKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKNALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEAKPKRKAKQKAVSRDTRIA 251
>gi|323467283|gb|ADX70970.1| YyaA like protein [Lactobacillus helveticus H10]
gi|323467326|gb|ADX71013.1| YyaA like protein [Lactobacillus helveticus H10]
Length = 279
Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 76/260 (29%), Positives = 139/260 (53%), Gaps = 16/260 (6%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + + IVPN + PR F + +++L ++ G++QP++VR + Y+IIAGE
Sbjct: 16 NKQIQDLELDKIVPNQYQPRRQFSDDSIKELADTLDQDGLLQPIVVREDGDDHYEIIAGE 75
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK +P I++N+++ + +A++EN+QR+DLNP++EA Y L+ TQ
Sbjct: 76 RRYRAAKSLGWETIPAIVKNMNDDQAASLALIENLQREDLNPIDEAKAYTNLMKLNDLTQ 135
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS--DPLSLAQVIV 213
+ +GKS+S+VAN LR+LKL V+ + + +I+ H R L++ D + +
Sbjct: 136 TALAKDMGKSQSYVANKLRLLKLDDDVQTALVEGKITARHGRALLNLDAADQKRVLAEVE 195
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK------------EKYLTDLEKKISSKV 261
+K ++V+ TEE+ ++ D + K E + +K + K++
Sbjct: 196 AKGLNVKQTEEIAKDVDAYFNPQPKKKEKAEQKRVVNRIPKDLKVQINTIKKAVKLAKDS 255
Query: 262 GLNISIKHRNN--KGQFCIK 279
G+ + IK N + I+
Sbjct: 256 GIKVKIKEDKNPDDYKITIE 275
>gi|217966002|ref|YP_002351680.1| Stage 0 sporulation protein J [Listeria monocytogenes HCC23]
gi|290891976|ref|ZP_06554973.1| chromosome partition protein [Listeria monocytogenes FSL J2-071]
gi|254767658|sp|B8DD20|NOC_LISMH RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|217335272|gb|ACK41066.1| Stage 0 sporulation protein J [Listeria monocytogenes HCC23]
gi|290558570|gb|EFD92087.1| chromosome partition protein [Listeria monocytogenes FSL J2-071]
gi|307572382|emb|CAR85561.1| chromosome partition protein, ParB family [Listeria monocytogenes
L99]
Length = 287
Score = 82.4 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 132/234 (56%), Gaps = 4/234 (1%)
Query: 17 LIGEVNQS-IDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
L G+ ++ +D + E + + + I PN PR F+ + +++L ++I+ HG+
Sbjct: 6 LFGKKEKNQMDDIDNIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGV 65
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
IQP++VR ++ Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L
Sbjct: 66 IQPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREEL 125
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
P+EEA Y L+ TQ + VGKS+S +AN +R+LKLP +V+E + ++IS H
Sbjct: 126 TPIEEAKAYRSLLDMQEVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLNKQISERH 185
Query: 196 ARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
AR+L++ I +V+ TE +QE K+ + +
Sbjct: 186 ARSLLALETEEQQVALLAEIAENHWNVKQTEARIQEILGVKKPVATKKTKPKRQ 239
>gi|295697829|ref|YP_003591067.1| parB-like partition protein [Bacillus tusciae DSM 2912]
gi|295413431|gb|ADG07923.1| parB-like partition protein [Bacillus tusciae DSM 2912]
Length = 284
Score = 82.0 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 82/226 (36%), Positives = 130/226 (57%), Gaps = 4/226 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
E + E I+I IVP+P+ PR F+ +GLE+L ++I++HG+IQPL+VR D
Sbjct: 16 EPDGKEAGEQVREIAIELIVPSPYQPRVAFDEQGLEELSRTIRTHGMIQPLVVREKDGK- 74
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y++IAGERR RAAK + VP I+R + + + A++EN+QR+ L+P+EEA Y QL+
Sbjct: 75 YELIAGERRLRAAKRIGMITVPAIVRAMSDSQAATAALIENLQRESLSPVEEAWAYRQLM 134
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDP 205
+G TQ + +G+ +S +AN LR+L+LP +V+ + IS HAR L
Sbjct: 135 ELHGLTQESLAQRLGRGQSTIANKLRLLQLPEAVQAALMDRTISERHARALLALSDGETQ 194
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + IVS + SV+ TE +++ K+ + K+ +
Sbjct: 195 LKVLSEIVSNEWSVKQTEVRIKQLLEAGVKKPRSRRTGISKDVRIA 240
>gi|289523967|ref|ZP_06440821.1| ParB family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289502623|gb|EFD23787.1| ParB family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 256
Score = 82.0 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 93/259 (35%), Positives = 142/259 (54%), Gaps = 18/259 (6%)
Query: 43 SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAK 102
I I P+ PR EGL L +SIK HGI+QPLIVR G Y+++AGERR++AAK
Sbjct: 2 PIDEIKPSSFQPRQSINDEGLTSLAESIKEHGILQPLIVRRAGEG-YEVVAGERRWKAAK 60
Query: 103 MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
+A L EVPV+I ++D+ SLE+A+VEN+QR+DL+P+E A ++I + T ++ S +
Sbjct: 61 IAGLKEVPVVIVDLDDAQSLEVALVENLQREDLSPIEVAKSLSEMIKRFEMTHEEVASRL 120
Query: 163 GKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVIVSKKMSV 219
G SR V+N LR+L LP+ V++++ + +IS GHAR L S D LA+ V SV
Sbjct: 121 GWSRPLVSNKLRLLDLPAEVQKLLEEGKISEGHARALSGLSSGDDQTLLARKCVVHYWSV 180
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
R E + + R+K +E + GL + +K ++ + I
Sbjct: 181 RRLENEISRLKASGDARRKKTST----------VELPLGKSHGLKVVVKKSQDESRLII- 229
Query: 280 YETNEQ--LKIICSLLGEN 296
+ ++ + L EN
Sbjct: 230 -GGLDDKRVERLVKFLEEN 247
>gi|260103055|ref|ZP_05753292.1| YyaA like protein [Lactobacillus helveticus DSM 20075]
gi|260083145|gb|EEW67265.1| YyaA like protein [Lactobacillus helveticus DSM 20075]
Length = 273
Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 76/260 (29%), Positives = 139/260 (53%), Gaps = 16/260 (6%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + + IVPN + PR F + +++L ++ G++QP++VR + Y+IIAGE
Sbjct: 10 NKQIQDLELDKIVPNQYQPRRQFSDDSIKELADTLDQDGLLQPIVVREDGDDHYEIIAGE 69
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAAK +P I++N+++ + +A++EN+QR+DLNP++EA Y L+ TQ
Sbjct: 70 RRYRAAKSLGWETIPAIVKNMNDDQAASLALIENLQREDLNPIDEAKAYTNLMKLNDLTQ 129
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS--DPLSLAQVIV 213
+ +GKS+S+VAN LR+LKL V+ + + +I+ H R L++ D + +
Sbjct: 130 TALAKDMGKSQSYVANKLRLLKLDDDVQTALVEGKITARHGRALLNLDVADQKRVLAEVE 189
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK------------EKYLTDLEKKISSKV 261
+K ++V+ TEE+ ++ D + K E + +K + K++
Sbjct: 190 AKGLNVKQTEEIAKDVDAYFNPQPKKKEKAEQKRVVNRIPKDFKVQINTIKKAVKLAKDS 249
Query: 262 GLNISIKHRNN--KGQFCIK 279
G+ + IK N + I+
Sbjct: 250 GIKVKIKEDKNPDDYKITIE 269
>gi|317133701|ref|YP_004093015.1| parB-like partition protein [Ethanoligenens harbinense YUAN-3]
gi|315471680|gb|ADU28284.1| parB-like partition protein [Ethanoligenens harbinense YUAN-3]
Length = 270
Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 76/222 (34%), Positives = 123/222 (55%), Gaps = 2/222 (0%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ I I I P+P PR F+ + L+ L +SI+ +GI+QPL VR I NG+Y+
Sbjct: 5 AVKEKAVRVIEIPIAQIRPSPWQPRRLFDEQALQGLAESIQENGILQPLSVRNIGNGMYE 64
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
++AGERR RA ++ P I+ + + S A++EN+QR+DL+ EEA +L+
Sbjct: 65 LVAGERRLRALRLVGYKTAPCILLDATVQESAVFALLENLQRQDLHFFEEAESMCRLVET 124
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA- 209
G TQ + + +GKS+ +AN LR+L+L VR++I ++ ++ HAR L+ L A
Sbjct: 125 VGMTQEQVAAKLGKSQPTIANKLRLLQLTPEVRDIIMEKGLTERHARALLRLPPSLQAAA 184
Query: 210 -QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
Q I++ K++V +T+ LV+E N K+ L
Sbjct: 185 LQRILNGKLNVAETDRLVEEMLNPPHPHPAGRSMPLIKDVRL 226
>gi|255022408|ref|ZP_05294394.1| Stage 0 sporulation protein J [Listeria monocytogenes FSL J1-208]
Length = 273
Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 76/224 (33%), Positives = 126/224 (56%), Gaps = 3/224 (1%)
Query: 26 DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID 85
D + E + + + I PN PR F+ + + +L ++I+ HG+IQP++VR ++
Sbjct: 2 DDTDNIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKINELARTIRIHGVIQPIVVREME 61
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L P+EEA Y
Sbjct: 62 PDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELTPIEEAKAYR 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
L+ TQ + VGKS+S +AN +R+LKLP +V+E + ++IS HAR+L++
Sbjct: 122 SLLDMQEVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLNKQISERHARSLLALETE 181
Query: 206 LSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
IV +V+ TE +QE K+ + +
Sbjct: 182 EQQVTLLAEIVENHWNVKQTEARIQEILGVKKPVATKKPKPKRQ 225
>gi|218507134|ref|ZP_03505012.1| chromosome partitioning protein B [Rhizobium etli Brasil 5]
Length = 145
Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 69/141 (48%), Positives = 95/141 (67%)
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI 212
YTQND+G I+GKSRSHVAN LR+LKLP VR+++ +S GHAR LVST DP SLA+ I
Sbjct: 2 YTQNDLGEIIGKSRSHVANSLRLLKLPDPVRDLLAAGSLSAGHARALVSTPDPASLARTI 61
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
V+K MSVRD E+L Q + + ++ +K+ LE+ +S +GL++SI H+ +
Sbjct: 62 VAKGMSVRDAEKLAQNNIKAQSEPQQPALRRDQKDSDTLALERTLSDALGLDVSINHKTS 121
Query: 273 KGQFCIKYETNEQLKIICSLL 293
GQ I Y++ EQL+ IC LL
Sbjct: 122 GGQIKISYKSLEQLEEICRLL 142
>gi|46908981|ref|YP_015370.1| ParB family chromosome partioning protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47092681|ref|ZP_00230468.1| chromosome partition protein, ParB family [Listeria monocytogenes
str. 4b H7858]
gi|226225344|ref|YP_002759451.1| DNA-binding protein Spo0J-like [Listeria monocytogenes Clip81459]
gi|254824840|ref|ZP_05229841.1| chromosome partition protein [Listeria monocytogenes FSL J1-194]
gi|254851902|ref|ZP_05241250.1| chromosome partition protein [Listeria monocytogenes FSL R2-503]
gi|254930932|ref|ZP_05264291.1| chromosome partition protein [Listeria monocytogenes HPB2262]
gi|255520534|ref|ZP_05387771.1| DNA-binding protein Spo0J-like [Listeria monocytogenes FSL J1-175]
gi|300763448|ref|ZP_07073446.1| ParB family chromosome partition protein [Listeria monocytogenes
FSL N1-017]
gi|81402951|sp|Q71VW9|NOC_LISMF RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|259512071|sp|C1L0C8|NOC_LISMC RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|46882254|gb|AAT05547.1| chromosome partition protein, ParB family [Listeria monocytogenes
serotype 4b str. F2365]
gi|47018976|gb|EAL09722.1| chromosome partition protein, ParB family [Listeria monocytogenes
str. 4b H7858]
gi|225877806|emb|CAS06521.1| Putative DNA-binding protein Spo0J-like [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605198|gb|EEW17806.1| chromosome partition protein [Listeria monocytogenes FSL R2-503]
gi|293582479|gb|EFF94511.1| chromosome partition protein [Listeria monocytogenes HPB2262]
gi|293594082|gb|EFG01843.1| chromosome partition protein [Listeria monocytogenes FSL J1-194]
gi|300515725|gb|EFK42774.1| ParB family chromosome partition protein [Listeria monocytogenes
FSL N1-017]
gi|328468268|gb|EGF39274.1| DNA-binding protein Spo0J-like protein [Listeria monocytogenes
1816]
gi|332313224|gb|EGJ26319.1| Nucleoid occlusion protein [Listeria monocytogenes str. Scott A]
Length = 284
Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 132/233 (56%), Gaps = 5/233 (2%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G + + + E + + + I PN PR F+ + +++L ++I+ HG+I
Sbjct: 6 LFG--KKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVI 63
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L
Sbjct: 64 QPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELT 123
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + VGKS+S +AN +R+LKLP +V+E + ++IS HA
Sbjct: 124 PIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLNKQISERHA 183
Query: 197 RTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
R+L+ + +++ I +V+ TE +QE K+ + +
Sbjct: 184 RSLLALETEEQQVAILAEIAENHWNVKQTEARIQEILGVKKPVATKKTKPKRQ 236
>gi|229099908|ref|ZP_04230831.1| Nucleoid occlusion protein [Bacillus cereus Rock3-29]
gi|229106075|ref|ZP_04236688.1| Nucleoid occlusion protein [Bacillus cereus Rock3-28]
gi|229118971|ref|ZP_04248316.1| Nucleoid occlusion protein [Bacillus cereus Rock1-3]
gi|228664496|gb|EEL19992.1| Nucleoid occlusion protein [Bacillus cereus Rock1-3]
gi|228677341|gb|EEL31605.1| Nucleoid occlusion protein [Bacillus cereus Rock3-28]
gi|228683523|gb|EEL37478.1| Nucleoid occlusion protein [Bacillus cereus Rock3-29]
Length = 290
Score = 82.0 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +++L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIDELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKSALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEVKPKRKAKQKAVSRDARIA 251
>gi|313621897|gb|EFR92566.1| nucleoid occlusion protein [Listeria innocua FSL J1-023]
Length = 284
Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 130/233 (55%), Gaps = 5/233 (2%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G + + + E + + + I PN PR F+ + +++L ++I+ HG+I
Sbjct: 6 LFG--KKDKNQMDDIVEEGVQRVLELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVI 63
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ Y+IIAGERRFRA L ++P II+N+D++ IA++EN+QR++L
Sbjct: 64 QPIVVREMEPDYYEIIAGERRFRAVLSLKLEKIPAIIQNLDDEEVAAIALIENLQREELT 123
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + VGKS+S +AN +R+LKLP +V+E + ++IS HA
Sbjct: 124 PIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLNKQISERHA 183
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
R+L++ Q I +V+ TE +QE K+ + +
Sbjct: 184 RSLLALETEEQQVSLLQEIEENHWNVKQTEARIQEILGVKKPVATKKTKPKRQ 236
>gi|30265499|ref|NP_847876.1| stage 0 sporulation protein J, putative [Bacillus anthracis str.
Ames]
gi|47531067|ref|YP_022416.1| stage 0 sporulation protein J [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188318|ref|YP_031571.1| stage 0 sporulation protein J [Bacillus anthracis str. Sterne]
gi|49481152|ref|YP_039471.1| stage 0 sporulation protein J [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65317462|ref|ZP_00390421.1| COG1475: Predicted transcriptional regulators [Bacillus anthracis
str. A2012]
gi|118480508|ref|YP_897659.1| effector of nucleoid occlusion Noc [Bacillus thuringiensis str. Al
Hakam]
gi|165873013|ref|ZP_02217634.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0488]
gi|167635051|ref|ZP_02393368.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0442]
gi|167641743|ref|ZP_02399986.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0193]
gi|170689466|ref|ZP_02880656.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0465]
gi|170707527|ref|ZP_02897980.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0389]
gi|177655286|ref|ZP_02936840.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0174]
gi|190569301|ref|ZP_03022195.1| putative stage 0 sporulation protein J [Bacillus anthracis
Tsiankovskii-I]
gi|196036135|ref|ZP_03103535.1| putative stage 0 sporulation protein J [Bacillus cereus W]
gi|196041956|ref|ZP_03109243.1| putative stage 0 sporulation protein J [Bacillus cereus NVH0597-99]
gi|196045498|ref|ZP_03112729.1| putative stage 0 sporulation protein J [Bacillus cereus 03BB108]
gi|218906673|ref|YP_002454507.1| putative stage 0 sporulation protein J [Bacillus cereus AH820]
gi|227818250|ref|YP_002818259.1| putative stage 0 sporulation protein J [Bacillus anthracis str. CDC
684]
gi|228918093|ref|ZP_04081621.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228930487|ref|ZP_04093487.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936761|ref|ZP_04099552.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949203|ref|ZP_04111471.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229094592|ref|ZP_04225659.1| Nucleoid occlusion protein [Bacillus cereus Rock3-42]
gi|229124984|ref|ZP_04254158.1| Nucleoid occlusion protein [Bacillus cereus 95/8201]
gi|229187710|ref|ZP_04314846.1| Nucleoid occlusion protein [Bacillus cereus BGSC 6E1]
gi|229604875|ref|YP_002869690.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0248]
gi|254687078|ref|ZP_05150936.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
CNEVA-9066]
gi|254724139|ref|ZP_05185924.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A1055]
gi|254735156|ref|ZP_05192866.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
Western North America USA6153]
gi|254742135|ref|ZP_05199822.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
Kruger B]
gi|254755955|ref|ZP_05207987.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
Vollum]
gi|254761365|ref|ZP_05213387.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
Australia 94]
gi|300118817|ref|ZP_07056537.1| putative stage 0 sporulation protein J [Bacillus cereus SJ1]
gi|301056955|ref|YP_003795166.1| stage 0 sporulation protein J [Bacillus anthracis CI]
gi|81394077|sp|Q6HAF5|NOC_BACHK RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|81580867|sp|Q81JH5|NOC_BACAN RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|205829230|sp|A0RLQ9|NOC_BACAH RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|254767650|sp|C3P3F2|NOC_BACAA RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|254767651|sp|C3LGT8|NOC_BACAC RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|254767652|sp|B7JIK8|NOC_BACC0 RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|30260177|gb|AAP29362.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
Ames]
gi|47506215|gb|AAT34891.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
'Ames Ancestor']
gi|49182245|gb|AAT57621.1| stage 0 sporulation protein J, putative [Bacillus anthracis str.
Sterne]
gi|49332708|gb|AAT63354.1| stage 0 sporulation protein J [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118419733|gb|ABK88152.1| Effector of nucleoid occlusion Noc [Bacillus thuringiensis str. Al
Hakam]
gi|164711225|gb|EDR16781.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0488]
gi|167510297|gb|EDR85700.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0193]
gi|167529525|gb|EDR92275.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0442]
gi|170127523|gb|EDS96397.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0389]
gi|170666568|gb|EDT17341.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0465]
gi|172080213|gb|EDT65305.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0174]
gi|190559608|gb|EDV13599.1| putative stage 0 sporulation protein J [Bacillus anthracis
Tsiankovskii-I]
gi|195991302|gb|EDX55270.1| putative stage 0 sporulation protein J [Bacillus cereus W]
gi|196023705|gb|EDX62381.1| putative stage 0 sporulation protein J [Bacillus cereus 03BB108]
gi|196027211|gb|EDX65831.1| putative stage 0 sporulation protein J [Bacillus cereus NVH0597-99]
gi|218534782|gb|ACK87180.1| putative stage 0 sporulation protein J [Bacillus cereus AH820]
gi|227005870|gb|ACP15613.1| putative stage 0 sporulation protein J [Bacillus anthracis str. CDC
684]
gi|228595778|gb|EEK53462.1| Nucleoid occlusion protein [Bacillus cereus BGSC 6E1]
gi|228658485|gb|EEL14151.1| Nucleoid occlusion protein [Bacillus cereus 95/8201]
gi|228688839|gb|EEL42670.1| Nucleoid occlusion protein [Bacillus cereus Rock3-42]
gi|228810486|gb|EEM56839.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228822970|gb|EEM68811.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829206|gb|EEM74843.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841573|gb|EEM86689.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229269283|gb|ACQ50920.1| putative stage 0 sporulation protein J [Bacillus anthracis str.
A0248]
gi|298723785|gb|EFI64507.1| putative stage 0 sporulation protein J [Bacillus cereus SJ1]
gi|300379124|gb|ADK08028.1| stage 0 sporulation protein J [Bacillus cereus biovar anthracis
str. CI]
Length = 290
Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +E+L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIEELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKSALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERITKLLEEAKPKRKAKQKAVSRDTRIA 251
>gi|16804831|ref|NP_466316.1| hypothetical protein lmo2794 [Listeria monocytogenes EGD-e]
gi|224498360|ref|ZP_03666709.1| hypothetical protein LmonF1_01155 [Listeria monocytogenes Finland
1988]
gi|224502793|ref|ZP_03671100.1| hypothetical protein LmonFR_09769 [Listeria monocytogenes FSL
R2-561]
gi|254830769|ref|ZP_05235424.1| hypothetical protein Lmon1_05394 [Listeria monocytogenes 10403S]
gi|284800320|ref|YP_003412185.1| hypothetical protein LM5578_0065 [Listeria monocytogenes 08-5578]
gi|284993505|ref|YP_003415273.1| hypothetical protein LM5923_0065 [Listeria monocytogenes 08-5923]
gi|81507360|sp|Q8Y3P1|NOC_LISMO RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|16412294|emb|CAD01007.1| lmo2794 [Listeria monocytogenes EGD-e]
gi|284055882|gb|ADB66823.1| hypothetical protein LM5578_0065 [Listeria monocytogenes 08-5578]
gi|284058972|gb|ADB69911.1| hypothetical protein LM5923_0065 [Listeria monocytogenes 08-5923]
Length = 284
Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 130/233 (55%), Gaps = 5/233 (2%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G + + + E + + + I PN PR F+ + +++L ++I+ HG+I
Sbjct: 6 LFG--KKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVI 63
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L
Sbjct: 64 QPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELT 123
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + VGKS+S +AN +R+LKLP +V+E + ++IS HA
Sbjct: 124 PIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLIKQISERHA 183
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
R+L++ I +V+ TE +QE K++ + +
Sbjct: 184 RSLLALETEEQQVALLAEIAENHWNVKQTEARIQEILGVKKQVATKKTKPKRQ 236
>gi|47568680|ref|ZP_00239377.1| stage 0 sporulation protein J [Bacillus cereus G9241]
gi|225867462|ref|YP_002752840.1| putative stage 0 sporulation protein J [Bacillus cereus 03BB102]
gi|254767654|sp|C1ER74|NOC_BACC3 RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|47554668|gb|EAL13022.1| stage 0 sporulation protein J [Bacillus cereus G9241]
gi|225789878|gb|ACO30095.1| putative stage 0 sporulation protein J [Bacillus cereus 03BB102]
Length = 290
Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +E+L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIEELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKSALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEAKPKRKAKQKAVSRDTRIA 251
>gi|228924226|ref|ZP_04087497.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835444|gb|EEM80814.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 290
Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +++L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIDELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKNALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEAKPKRKAKQKAVSRDTRIA 251
>gi|47095601|ref|ZP_00233209.1| chromosome partition protein, ParB family [Listeria monocytogenes
str. 1/2a F6854]
gi|254899748|ref|ZP_05259672.1| DNA-binding protein Spo0J-like [Listeria monocytogenes J0161]
gi|254913049|ref|ZP_05263061.1| chromosome partition protein [Listeria monocytogenes J2818]
gi|254937430|ref|ZP_05269127.1| chromosome partition protein [Listeria monocytogenes F6900]
gi|47016031|gb|EAL06956.1| chromosome partition protein, ParB family [Listeria monocytogenes
str. 1/2a F6854]
gi|258610032|gb|EEW22640.1| chromosome partition protein [Listeria monocytogenes F6900]
gi|293591049|gb|EFF99383.1| chromosome partition protein [Listeria monocytogenes J2818]
Length = 284
Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 131/233 (56%), Gaps = 5/233 (2%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G + + + E + + + I PN PR F+ + +++L ++I+ HG+I
Sbjct: 6 LFG--KKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVI 63
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L
Sbjct: 64 QPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELT 123
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + VGKS+S +AN +R+LKLP +V+E + ++IS HA
Sbjct: 124 PIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLNKQISERHA 183
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
R+L++ I +V+ TE +QE + K++ + +
Sbjct: 184 RSLLALETEEQQVALLAEIAENHWNVKQTEARIQEILDVKKQVATKKTKPKRQ 236
>gi|56422026|ref|YP_149344.1| hypothetical protein GK3491 [Geobacillus kaustophilus HTA426]
gi|261420899|ref|YP_003254581.1| parB-like partition protein [Geobacillus sp. Y412MC61]
gi|297531684|ref|YP_003672959.1| parB-like partition protein [Geobacillus sp. C56-T3]
gi|319768570|ref|YP_004134071.1| parB-like partition protein [Geobacillus sp. Y412MC52]
gi|81557670|sp|Q5KU60|NOC_GEOKA RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|56381868|dbj|BAD77776.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|261377356|gb|ACX80099.1| parB-like partition protein [Geobacillus sp. Y412MC61]
gi|297254936|gb|ADI28382.1| parB-like partition protein [Geobacillus sp. C56-T3]
gi|317113436|gb|ADU95928.1| parB-like partition protein [Geobacillus sp. Y412MC52]
Length = 281
Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 130/216 (60%), Gaps = 3/216 (1%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
I + SI+PN PR F+ E +++L +I++HGIIQP++VR NG ++IIAGERR+
Sbjct: 28 VRHIPVKSIIPNRFQPRTMFDEEKIDELALTIRTHGIIQPIVVRECGNGRFEIIAGERRW 87
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA + +E+P II+N+++K + +A++EN+QR++L P+EEA+ Y +LI + TQ +
Sbjct: 88 RAVQKLGWTEIPAIIKNLNDKETASVALIENLQREELTPIEEAMAYAKLIELHDLTQEAL 147
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGHARTLVSTSDPLSLAQVIVSK 215
+GK +S +AN LR+LKLP V+E + + E L L L Q I+ K
Sbjct: 148 AQRLGKGQSTIANKLRLLKLPQEVQEALLQRAITERHARALIALKDKEKQLKLLQEIIDK 207
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+++V+ TE+ V + E++ K + ++ +
Sbjct: 208 QLNVKQTEDRVLKLLEAGERKPKPKRKAFSRDMRIA 243
>gi|254827362|ref|ZP_05232049.1| chromosome partition protein [Listeria monocytogenes FSL N3-165]
gi|258599740|gb|EEW13065.1| chromosome partition protein [Listeria monocytogenes FSL N3-165]
Length = 284
Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 131/233 (56%), Gaps = 5/233 (2%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G + + + E + + + I PN PR F+ + +++L ++I+ HG+I
Sbjct: 6 LFG--KKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVI 63
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L
Sbjct: 64 QPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELT 123
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + VGKS+S +AN +R+LKLP +V+E + ++IS HA
Sbjct: 124 PIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLIKQISERHA 183
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
R+L++ I +V+ TE +QE + K++ + +
Sbjct: 184 RSLLALETEEQQVALLAEIAENHWNVKQTEARIQEILDVKKQVATKKTKPKRQ 236
>gi|323487695|ref|ZP_08092953.1| parB-like partition protein [Planococcus donghaensis MPA1U2]
gi|323398429|gb|EGA91217.1| parB-like partition protein [Planococcus donghaensis MPA1U2]
Length = 287
Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 75/246 (30%), Positives = 129/246 (52%), Gaps = 6/246 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G+ E E + + I N + PR F+ E +E+L ++I HG+IQP
Sbjct: 12 GDKANDTAKKETAEHKASEEVMKLPLDKIHANKYQPRTIFDEEKIEELARTIHVHGVIQP 71
Query: 79 LIVRAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
++VR + Y+IIAGERRFRA K +EVP IIRN+ +K + IA++EN+QR++L
Sbjct: 72 IVVRNSEREGEYEIIAGERRFRAMKSLEWTEVPAIIRNLSDKETASIALIENLQREELTS 131
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EEA Y L+ TQ + +GK +S VAN LR+LKLP ++ + +++ HAR
Sbjct: 132 IEEAHAYRNLLDIQEITQEALAQRLGKGQSTVANKLRLLKLPEEIQTALLNRQLTERHAR 191
Query: 198 ---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD-- 252
+ L + + ++V+ E V + + + K+ K + + ++ +
Sbjct: 192 ALLQVKDVEQQKKLFDETIEESLNVKQLEAKVTKLLSTEPKKPKARKKAFSRDMRIAMNT 251
Query: 253 LEKKIS 258
+++ +S
Sbjct: 252 IKESLS 257
>gi|229035139|ref|ZP_04189085.1| Nucleoid occlusion protein [Bacillus cereus AH1271]
gi|228728205|gb|EEL79235.1| Nucleoid occlusion protein [Bacillus cereus AH1271]
Length = 290
Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +E+L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIEELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKSALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEAKPKRKAKQKAVSRDTRIA 251
>gi|16801985|ref|NP_472253.1| hypothetical protein lin2926 [Listeria innocua Clip11262]
gi|81524599|sp|Q926W4|NOC_LISIN RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|16415467|emb|CAC98151.1| lin2926 [Listeria innocua Clip11262]
Length = 284
Score = 81.6 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 130/233 (55%), Gaps = 5/233 (2%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G + + + E + + + I PN PR F+ + +++L ++I+ HG+I
Sbjct: 6 LFG--KKDKNQMDDIVEEGVQRVLELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVI 63
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ Y+IIAGERRFRA L ++P II+N+D++ IA++EN+QR++L
Sbjct: 64 QPIVVREMEPDYYEIIAGERRFRAVLSLKLEKIPAIIQNLDDEEVAAIALIENLQREELT 123
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + VGKS+S +AN +R+LKLP +V+E + ++IS HA
Sbjct: 124 PIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLNKQISERHA 183
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
R+L++ Q I +V+ TE +QE K+ + +
Sbjct: 184 RSLLALETEEQQVSLLQEIEENHWNVKQTEARIQEILGVKKSVATKKTKPKRQ 236
>gi|331011897|gb|EGH91953.1| chromosome partitioning protein ParB [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 189
Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/188 (30%), Positives = 121/188 (64%), Gaps = 7/188 (3%)
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
+P ++R+V +++++ +A++EN+QR+DLNP+EEA+ ++L E+ TQ + VGKSR
Sbjct: 5 IPAMVRDVPDETAIAMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVS 64
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELV 226
VAN+LR++ LP +++ M+ ++ +GHAR L+ S + A+ +V++ ++VR TE LV
Sbjct: 65 VANLLRLIALPEAIKTMLSHGDLEMGHARALLGLSEDRQVEGARHVVARGLTVRQTEALV 124
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQ 285
++ + K + + + + ++ LE++++ ++G + I+H KGQ I+Y + ++
Sbjct: 125 RQWLSGKPEAAEPVKA----DPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDE 180
Query: 286 LKIICSLL 293
L+ + + +
Sbjct: 181 LQGVLAHI 188
>gi|299820857|ref|ZP_07052746.1| chromosome partitioning protein SpoOJ [Listeria grayi DSM 20601]
gi|299817878|gb|EFI85113.1| chromosome partitioning protein SpoOJ [Listeria grayi DSM 20601]
Length = 284
Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 126/216 (58%), Gaps = 3/216 (1%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G+ +++ + E++ + + + + I PN PR F + + +L Q+I+ HGII
Sbjct: 5 LFGKKDKTNEESEQEQLETFQRVEDLPMDKIFPNQFQPRTVFNEDKIAELAQTIEEHGII 64
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR +D Y+IIAGERRFRAA + +P +++ +D++ IA++EN+QR+ L
Sbjct: 65 QPIVVRKMDPDYYEIIAGERRFRAALSLEMETIPAVVQEMDDEEVAAIALIENLQREQLT 124
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + + +GKS+S +AN LR+LKLP ++ + ++IS HA
Sbjct: 125 PIEEAKAYRNLLDIQDVTQELLATRLGKSQSAIANKLRLLKLPEEIQAAVLDKQISERHA 184
Query: 197 RTLVSTSDPLSLAQVIVS---KKMSVRDTEELVQEQ 229
R+L+ +++ +V+ TE +QE
Sbjct: 185 RSLLVLETEEQQLEILKEVLANHWNVKQTETRIQEL 220
>gi|75761487|ref|ZP_00741451.1| Chromosome partitioning protein parB [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228905425|ref|ZP_04069380.1| Nucleoid occlusion protein [Bacillus thuringiensis IBL 4222]
gi|74491026|gb|EAO54278.1| Chromosome partitioning protein parB [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228854245|gb|EEM98948.1| Nucleoid occlusion protein [Bacillus thuringiensis IBL 4222]
Length = 290
Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +++L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIDELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKSALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIVKLLEEAKPKRKAKQKAVSRDTRIA 251
>gi|242243261|ref|ZP_04797706.1| stage 0 DNA-binding protein [Staphylococcus epidermidis W23144]
gi|242233210|gb|EES35522.1| stage 0 DNA-binding protein [Staphylococcus epidermidis W23144]
gi|319399920|gb|EFV88166.1| protein yyaA [Staphylococcus epidermidis FRI909]
Length = 279
Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 88/274 (32%), Positives = 162/274 (59%), Gaps = 14/274 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E + + I I IVPN + PR FE
Sbjct: 1 MKKPFSK---------LFG-LKNKDDIIGYTEEERNNNVESIHIERIVPNRYQPRQVFEP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+++L +SI+ HG++QP++VR I+ +++IIAGERRFRA + +V VI+R++D++
Sbjct: 51 NKIKELAESIEEHGLLQPIVVRPIEEDMFEIIAGERRFRALQSLHKPQVDVIVRDMDDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQN++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSVVEEAEAYKKLLEIGETTQNELAKSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+V + +R+ +I+ HAR ++ L + ++S+K++V+ TE+ V+++ ++ + +
Sbjct: 171 NVIKRLREGKITERHARAVLVLPDETQEELIEQVISQKLNVKQTEDRVRQKTGPEKVKAQ 230
Query: 239 IFEGSREKEKYLTDLEKKIS--SKVGLNISIKHR 270
F+ S++ + +L K I K G+ + K +
Sbjct: 231 TFQFSQDVTQAKEELGKSIETIEKSGIRVEQKDK 264
>gi|229020706|ref|ZP_04177433.1| Nucleoid occlusion protein [Bacillus cereus AH1273]
gi|229026922|ref|ZP_04183245.1| Nucleoid occlusion protein [Bacillus cereus AH1272]
gi|228734380|gb|EEL85051.1| Nucleoid occlusion protein [Bacillus cereus AH1272]
gi|228740601|gb|EEL90872.1| Nucleoid occlusion protein [Bacillus cereus AH1273]
Length = 290
Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +++L +I++HG+IQP
Sbjct: 16 SEFELQEESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIDELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKSALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEAKPKRKAKQKAVSRDTRIA 251
>gi|27469332|ref|NP_765969.1| DNA-binding protein Spo0J-like protein [Staphylococcus epidermidis
ATCC 12228]
gi|57865945|ref|YP_187606.1| ParB family chromosome partioning protein [Staphylococcus
epidermidis RP62A]
gi|251811358|ref|ZP_04825831.1| stage 0 DNA-binding protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282874715|ref|ZP_06283594.1| ParB-like protein [Staphylococcus epidermidis SK135]
gi|293367587|ref|ZP_06614240.1| stage 0 DNA-binding protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|27316882|gb|AAO06057.1|AE016752_90 DNA-binding protein Spo0J-like protein [Staphylococcus epidermidis
ATCC 12228]
gi|57636603|gb|AAW53391.1| chromosome partioning protein, ParB family [Staphylococcus
epidermidis RP62A]
gi|251805107|gb|EES57764.1| stage 0 DNA-binding protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296431|gb|EFA88946.1| ParB-like protein [Staphylococcus epidermidis SK135]
gi|291318300|gb|EFE58693.1| stage 0 DNA-binding protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329724165|gb|EGG60683.1| nucleoid occlusion protein [Staphylococcus epidermidis VCU144]
gi|329735736|gb|EGG72017.1| nucleoid occlusion protein [Staphylococcus epidermidis VCU028]
gi|329736157|gb|EGG72430.1| nucleoid occlusion protein [Staphylococcus epidermidis VCU045]
Length = 279
Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 89/274 (32%), Positives = 163/274 (59%), Gaps = 14/274 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E + + I I IVPN + PR FE
Sbjct: 1 MKKPFSK---------LFG-LKNKDDIIGYTEEERNNNVESIHIERIVPNRYQPRQVFEP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+++L +SI+ HG++QP++VR I+ +++IIAGERRFRA + +V VI+R++D++
Sbjct: 51 NKIKELAESIEEHGLLQPIVVRPIEEDMFEIIAGERRFRALQSLHKPQVDVIVRDMDDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ G TQN++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSVVEEAEAYKKLLEIGGTTQNELAKSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+V + +R+ +I+ HAR ++ L + ++S+K++V+ TE+ V+++ ++ + +
Sbjct: 171 NVIKRLREGKITERHARAVLVLPDETQEELIEQVISQKLNVKQTEDRVRQKTGPEKVKAQ 230
Query: 239 IFEGSREKEKYLTDLEKKIS--SKVGLNISIKHR 270
F+ S++ + +L K I K G+ + K +
Sbjct: 231 TFQFSQDVTQAKEELGKSIETIEKSGIRVEQKDK 264
>gi|255025134|ref|ZP_05297120.1| DNA-binding protein Spo0J-like [Listeria monocytogenes FSL J2-003]
Length = 270
Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 74/221 (33%), Positives = 126/221 (57%), Gaps = 3/221 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ E + + + I PN PR F+ + +++L ++I+ HG+IQP++VR ++
Sbjct: 2 DDIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVREMEPDY 61
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L P+EEA Y L+
Sbjct: 62 YEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELTPIEEAKAYRSLL 121
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
TQ + VGKS+S +AN +R+LKLP +V+E + ++IS HAR+L++
Sbjct: 122 DMQDVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLNKQISERHARSLLALETEEQQ 181
Query: 209 ---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
I +V+ TE +QE K++ + +
Sbjct: 182 VALLAEIAENHWNVKQTEARIQEILGVKKQVATKKTKPKRQ 222
>gi|30023505|ref|NP_835136.1| stage 0 sporulation protein J [Bacillus cereus ATCC 14579]
gi|206970472|ref|ZP_03231425.1| putative stage 0 sporulation protein J [Bacillus cereus AH1134]
gi|218233678|ref|YP_002370256.1| putative stage 0 sporulation protein J [Bacillus cereus B4264]
gi|218900622|ref|YP_002449033.1| putative stage 0 sporulation protein J [Bacillus cereus G9842]
gi|228942630|ref|ZP_04105162.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228955731|ref|ZP_04117726.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228961745|ref|ZP_04123348.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228968633|ref|ZP_04129616.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228975560|ref|ZP_04136112.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982196|ref|ZP_04142485.1| Nucleoid occlusion protein [Bacillus thuringiensis Bt407]
gi|229051150|ref|ZP_04194694.1| Nucleoid occlusion protein [Bacillus cereus AH676]
gi|229072946|ref|ZP_04206142.1| Nucleoid occlusion protein [Bacillus cereus F65185]
gi|229130727|ref|ZP_04259680.1| Nucleoid occlusion protein [Bacillus cereus BDRD-Cer4]
gi|229148031|ref|ZP_04276370.1| Nucleoid occlusion protein [Bacillus cereus BDRD-ST24]
gi|229153640|ref|ZP_04281816.1| Nucleoid occlusion protein [Bacillus cereus m1550]
gi|229181727|ref|ZP_04309050.1| Nucleoid occlusion protein [Bacillus cereus 172560W]
gi|229193732|ref|ZP_04320673.1| Nucleoid occlusion protein [Bacillus cereus ATCC 10876]
gi|296505909|ref|YP_003667609.1| stage 0 sporulation protein J [Bacillus thuringiensis BMB171]
gi|81432956|sp|Q814F9|NOC_BACCR RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|254767653|sp|B7IST1|NOC_BACC2 RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|254767655|sp|B7HGE1|NOC_BACC4 RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|29899066|gb|AAP12337.1| Stage 0 sporulation protein J [Bacillus cereus ATCC 14579]
gi|206735049|gb|EDZ52218.1| putative stage 0 sporulation protein J [Bacillus cereus AH1134]
gi|218161635|gb|ACK61627.1| putative stage 0 sporulation protein J [Bacillus cereus B4264]
gi|218541372|gb|ACK93766.1| putative stage 0 sporulation protein J [Bacillus cereus G9842]
gi|228589757|gb|EEK47635.1| Nucleoid occlusion protein [Bacillus cereus ATCC 10876]
gi|228601760|gb|EEK59258.1| Nucleoid occlusion protein [Bacillus cereus 172560W]
gi|228629826|gb|EEK86479.1| Nucleoid occlusion protein [Bacillus cereus m1550]
gi|228635456|gb|EEK91947.1| Nucleoid occlusion protein [Bacillus cereus BDRD-ST24]
gi|228652744|gb|EEL08629.1| Nucleoid occlusion protein [Bacillus cereus BDRD-Cer4]
gi|228710192|gb|EEL62170.1| Nucleoid occlusion protein [Bacillus cereus F65185]
gi|228722213|gb|EEL73614.1| Nucleoid occlusion protein [Bacillus cereus AH676]
gi|228777548|gb|EEM25826.1| Nucleoid occlusion protein [Bacillus thuringiensis Bt407]
gi|228784170|gb|EEM32197.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791062|gb|EEM38680.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228797939|gb|EEM44949.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228803959|gb|EEM50583.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228817056|gb|EEM63149.1| Nucleoid occlusion protein [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|296326961|gb|ADH09889.1| stage 0 sporulation protein J [Bacillus thuringiensis BMB171]
gi|326943279|gb|AEA19175.1| stage 0 sporulation protein J [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 290
Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +++L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIDELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKSALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEAKPKRKAKQKAVSRDTRIA 251
>gi|229164432|ref|ZP_04292360.1| Nucleoid occlusion protein [Bacillus cereus R309803]
gi|228619037|gb|EEK75935.1| Nucleoid occlusion protein [Bacillus cereus R309803]
Length = 290
Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +++L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIDELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEKIKSALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEAKPKRKAKQKAVSRDTRIA 251
>gi|146344366|ref|YP_001202222.1| parB family partitioning protein [Pseudomonas fluorescens SBW25]
gi|146188178|emb|CAM96509.1| putative parB-family partitioning protein [Pseudomonas fluorescens
SBW25]
Length = 286
Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH-GIIQPLIVRAIDNGLYKI 91
+ +P + I + + P R F E L+DL S+K+ + P+IV +G + I
Sbjct: 15 QDVPTTLMNIEVERLHPGVWQKRKLFSEESLDDLADSMKTTGTNVVPMIVCFRPDGDFSI 74
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
IAGERR+R+ + + + + + I+ VEN+QR DLNP+EEA Y L +E
Sbjct: 75 IAGERRWRSGQRLGFRTLKCEVGAYSYEQAAYISAVENLQRTDLNPIEEATSYNDLCTEL 134
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSL 208
+ D+ + +GKSRSH++N +R+L L VR+ + +S GHAR L + +D ++
Sbjct: 135 NLSHGDLATQLGKSRSHISNYVRLLDLDIRVRDSLISSRLSYGHARPLCSLKNKADQRNI 194
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK 268
A+ V + SV+ ++ V +K K+ + + L LE+ IS GL+ +K
Sbjct: 195 AEKAVRFEWSVQKIQQAVNALTQRKPSPVKL----SDTDPDLKRLERDISEVTGLDCVVK 250
Query: 269 HRNNKGQFCIKYE--TNEQLKIICSLLG 294
G + + + +E + LG
Sbjct: 251 RTPG-GSWQLGFLAPESESFTGLLDRLG 277
>gi|229542323|ref|ZP_04431383.1| parB-like partition protein [Bacillus coagulans 36D1]
gi|229326743|gb|EEN92418.1| parB-like partition protein [Bacillus coagulans 36D1]
Length = 285
Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 87/257 (33%), Positives = 137/257 (53%), Gaps = 22/257 (8%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
IS+ I+PN PR F E +++L ++I +HGIIQP++VR + G Y+IIAGERRF
Sbjct: 29 IKNISVSCIIPNRFQPRTIFNEEKIDELARTIHTHGIIQPIVVREYEAGQYEIIAGERRF 88
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA + VP II+N+ + + IA++EN+QR++L P+EEA+ Y +L+ + TQ +
Sbjct: 89 RAVRKLGWETVPAIIKNMSDTETASIALIENLQREELTPIEEAMAYGKLLELHHLTQEAL 148
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSK 215
+GK +S VAN LR+LKLP V+E + +++I+ HAR L + + I++K
Sbjct: 149 AQRLGKGQSTVANKLRLLKLPPEVQEALLQKQITERHARALIPLKEAEKQVRVLNEILAK 208
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKE-------------------KYLTDLEKK 256
++V+ TEE V NK EK+ K + K+ L E+
Sbjct: 209 NLNVKQTEEYVTRMMNKPEKKAKPRRQAFSKDMRIAVNTIRQSVSMVTDSGINLDSKEED 268
Query: 257 ISSKVGLNISIKHRNNK 273
+ I I +
Sbjct: 269 FEDYYQITIRIPKKAKS 285
>gi|116493782|ref|YP_805516.1| Spo0J-like protein [Lactobacillus casei ATCC 334]
gi|116103932|gb|ABJ69074.1| Effector of nucleoid occlusion Noc [Lactobacillus casei ATCC 334]
Length = 276
Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 121/234 (51%), Gaps = 12/234 (5%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+++ G ++ + I +IVPN PR F E + +L +IK H
Sbjct: 3 LSSIFGHKKPDDETV----------VQQLPITAIVPNQFQPRKVFTPESIRELATTIKDH 52
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++QP+IVR Y+IIAGERR+RA + + P I++ +D+ S +A+VEN+QR+
Sbjct: 53 GLLQPIIVREYKPEKYEIIAGERRYRAMQTLGWEKAPAIVQKMDDDESASMALVENLQRE 112
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
L+ +EE Y L+ TQ + +GKS++ VAN +R+LKL V+E + K IS
Sbjct: 113 GLSAIEEGQAYVALMKLNHLTQAALAEQLGKSQAFVANKIRLLKLSEPVQEALMKSRISE 172
Query: 194 GHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
H R L+ + +A I S ++V++T L+ E K+ K R
Sbjct: 173 RHGRELLKLDEKQQVAALHQIFSDDLTVKETSALINEMLRPKKPTPKPKPKVRR 226
>gi|58338076|ref|YP_194661.1| chromosome partitioning protein [Lactobacillus acidophilus NCFM]
gi|58255393|gb|AAV43630.1| chromosome partitioning protein [Lactobacillus acidophilus NCFM]
Length = 276
Score = 80.9 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 73/264 (27%), Positives = 132/264 (50%), Gaps = 15/264 (5%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ + + + IVPN + PR F + +++L +++ G++QP++VR D Y
Sbjct: 10 DEEVPKNKQIQDLELDKIVPNRYQPRREFSEDSIKELAETLDKDGLLQPIVVRE-DGDQY 68
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERR+RAAK +P I++N+D+ + +A++EN+QR+DLNP++EA Y L+
Sbjct: 69 EIIAGERRYRAAKSLGWETIPAIVKNMDDDQAASLALIENLQREDLNPIDEAKAYTNLMK 128
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
TQ + +GKS+S+VAN LR+LKL V++ + + +I+ H R L+ S+
Sbjct: 129 LNNLTQTALAKDMGKSQSYVANKLRLLKLGDEVQQALIEGKITARHGRALIGLSEDDQKR 188
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK------------EKYLTDLEKKI 257
+ + + + +D + K S +K + K+
Sbjct: 189 VLAEIEAKGLNVKQTEEIAKDVEAYFNPKPKAKSEQKRVVNRIPKDLKVQINTIKKAVKL 248
Query: 258 SSKVGLNISIKHRNN--KGQFCIK 279
+ G+ + IK N + I+
Sbjct: 249 AEDSGIKVKIKEDKNPDDYKITIE 272
>gi|258512900|ref|YP_003186334.1| parB-like partition protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479626|gb|ACV59945.1| parB-like partition protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 294
Score = 80.5 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 127/234 (54%), Gaps = 6/234 (2%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
I + IVPNP+ PR F E +E+L ++I +HG+IQP++VR + Y++IAG
Sbjct: 17 TQTQVVDIPVERIVPNPYQPRAIFHQESIEELAKTIHTHGVIQPVVVRKKGDV-YELIAG 75
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR RA + +P I+R++++ + A++EN+QR+ L P+EEA+ Y+QL+ +G T
Sbjct: 76 ERRLRAVRHLGWPTIPAIVRDLNDAQTASAALIENLQREGLTPIEEAVAYQQLMELHGLT 135
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQV 211
Q + +GK +S +AN LR+L LP +V++ + +I+ HAR L S + L
Sbjct: 136 QESLAQRLGKGQSTIANKLRLLHLPQAVQDALLTRQITERHARALLALPSEELQVELLNE 195
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK--EKYLTDLEKKISSKVGL 263
+ K +V+ EE V+ + + R++ K + I + +
Sbjct: 196 CIEKGWNVKQMEEKVKAKLESLGSTAERRRKPRKRGLSKDVRLAVNTIRQSLQM 249
>gi|218291085|ref|ZP_03495108.1| parB-like partition protein [Alicyclobacillus acidocaldarius LAA1]
gi|218238970|gb|EED06177.1| parB-like partition protein [Alicyclobacillus acidocaldarius LAA1]
Length = 294
Score = 80.5 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 127/234 (54%), Gaps = 6/234 (2%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
I + IVPNP+ PR F E +E+L ++I +HG+IQP++VR + Y++IAG
Sbjct: 17 SQTQVVDIPVERIVPNPYQPRAIFHQESIEELAKTIHTHGVIQPVVVRKKGDV-YELIAG 75
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR RA + +P I+R++++ + A++EN+QR+ L P+EEA+ Y+QL+ +G T
Sbjct: 76 ERRLRAVRHLGWPTIPAIVRDLNDAQTASAALIENLQREGLTPIEEAVAYQQLMELHGLT 135
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQV 211
Q + +GK +S +AN LR+L LP +V++ + +I+ HAR L S + L
Sbjct: 136 QESLAQRLGKGQSTIANKLRLLHLPQAVQDALLTRQITERHARALLALPSEELQVELLNE 195
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK--EKYLTDLEKKISSKVGL 263
+ K +V+ EE V+ + + R++ K + I + +
Sbjct: 196 CIEKGWNVKQMEEKVKAKLESLGSTAERRRKPRKRGLSKDVRLAVNTIRQSLQM 249
>gi|218660468|ref|ZP_03516398.1| chromosome partitioning protein B [Rhizobium etli IE4771]
Length = 146
Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQ 210
YGYTQND+G I+GKSRSHVAN LR+LKLP VR+++ +S GHAR LVST DP SLA+
Sbjct: 1 YGYTQNDLGEIIGKSRSHVANSLRLLKLPDPVRDLLAAGSLSAGHARALVSTPDPASLAR 60
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
IV+K MSVRD E+L Q + + ++ +K+ LE+ +S +GL +SI H+
Sbjct: 61 TIVAKGMSVRDAEKLAQNNIKAQSEPQQTASRRDQKDSDTLALERTLSDALGLEVSINHK 120
Query: 271 NNKGQFCIKYETNEQLKIICSLL 293
+ GQ I Y++ EQL+ +C LL
Sbjct: 121 TSGGQIKISYKSLEQLEEVCRLL 143
>gi|227902746|ref|ZP_04020551.1| stage 0 DNA-binding protein [Lactobacillus acidophilus ATCC 4796]
gi|227869409|gb|EEJ76830.1| stage 0 DNA-binding protein [Lactobacillus acidophilus ATCC 4796]
Length = 270
Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 73/264 (27%), Positives = 132/264 (50%), Gaps = 15/264 (5%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ + + + IVPN + PR F + +++L +++ G++QP++VR D Y
Sbjct: 4 DEEVPKNKQIQDLELDKIVPNRYQPRREFSEDSIKELAETLDKDGLLQPIVVRE-DGDQY 62
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERR+RAAK +P I++N+D+ + +A++EN+QR+DLNP++EA Y L+
Sbjct: 63 EIIAGERRYRAAKSLGWETIPAIVKNMDDDQAASLALIENLQREDLNPIDEAKAYTNLMK 122
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
TQ + +GKS+S+VAN LR+LKL V++ + + +I+ H R L+ S+
Sbjct: 123 LNNLTQTALAKDMGKSQSYVANKLRLLKLGDEVQQALIEGKITARHGRALIGLSEDDQKR 182
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK------------EKYLTDLEKKI 257
+ + + + +D + K S +K + K+
Sbjct: 183 VLAEIEAKGLNVKQTEEIAKDVEAYFNPKPKAKSEQKRVVNRIPKDLKVQINTIKKAVKL 242
Query: 258 SSKVGLNISIKHRNN--KGQFCIK 279
+ G+ + IK N + I+
Sbjct: 243 AEDSGIKVKIKEDKNPDDYKITIE 266
>gi|220933185|ref|YP_002510093.1| parB-like partition protein [Halothermothrix orenii H 168]
gi|219994495|gb|ACL71098.1| parB-like partition protein [Halothermothrix orenii H 168]
Length = 268
Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 87/241 (36%), Positives = 144/241 (59%), Gaps = 6/241 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ I + I PNP+ PR F+ E L +L SIKS+G+IQP+ VR D+G Y++IA
Sbjct: 12 KDKDGVIMIPVDKIEPNPYQPRKDFKEEDLNELADSIKSYGVIQPITVRVKDDG-YELIA 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR RA++ L+E+P +I+ + ++ EIA+VEN+QRKDLN +EEA Y++L+ ++
Sbjct: 71 GERRLRASRYLGLNEIPAVIKELTDREMAEIALVENLQRKDLNFMEEARAYQKLLEQFKL 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQ 210
TQ ++ +GKS+S +AN LR+L L + V+E I I+ HAR L+ + +
Sbjct: 131 TQKELAQRLGKSQSTIANKLRLLSLSNDVQEQINSPLITERHARALLKLDNKEQQIKVIE 190
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS--KVGLNISIK 268
I KK++V+ TE++V + + K ++ K+ ++ + L+K I+ GL + +
Sbjct: 191 EIKDKKLTVKQTEQMVNKLLDNKNRKAKVVTVYKDLRIFTNSLKKTINEMKSAGLEVKVD 250
Query: 269 H 269
Sbjct: 251 K 251
>gi|317130999|ref|YP_004097281.1| parB-like partition protein [Bacillus cellulosilyticus DSM 2522]
gi|315475947|gb|ADU32550.1| parB-like partition protein [Bacillus cellulosilyticus DSM 2522]
Length = 284
Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/254 (29%), Positives = 141/254 (55%), Gaps = 5/254 (1%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G ++ + E+ T + E + I IVPN PR F+ E +E+L Q+IK+HGII
Sbjct: 8 LFG-LSDKNEETEEITISEKEEVHQLPIDKIVPNQFQPRTVFQDERIEELAQTIKTHGII 66
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ ++++IAGERR+RA + +P II+ ++ + +A++EN+QR+ L
Sbjct: 67 QPIVVRVREDDIFELIAGERRWRAVQKLGWETIPAIIKEFNDSQTASVALIENLQREGLT 126
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
+EEA Y +L+ + TQ + +GK +S +AN LR+L+LP V++ + +I+ HA
Sbjct: 127 SIEEATAYAKLLEIHNLTQESLAQRLGKGQSTIANKLRLLQLPQIVQDALLNRQITERHA 186
Query: 197 RTLVSTSD---PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG-SREKEKYLTD 252
R L++ + L + I++++++V+ TEE ++ K + + + +
Sbjct: 187 RALIALKNVELQEKLLERIINEELNVKQTEEAAKKILEGNNNTAKKPKPLRKSVSRDMRL 246
Query: 253 LEKKISSKVGLNIS 266
I V + +
Sbjct: 247 AMNTIRKSVDMVVQ 260
>gi|227891372|ref|ZP_04009177.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
salivarius ATCC 11741]
gi|227866761|gb|EEJ74182.1| chromosome partitioning protein, DNA-binding protein [Lactobacillus
salivarius ATCC 11741]
Length = 280
Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 85/273 (31%), Positives = 144/273 (52%), Gaps = 15/273 (5%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
EK + E + I + N PR F E + +L ++I+SHG++QP+IVR
Sbjct: 7 KSKKEEKVEDDTQEKVQELPIEQVEVNEDQPRQVFSEESIAELAETIQSHGLLQPIIVRP 66
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
+ + Y+IIAGERR+RA K + ++P I++ +D K + +A++EN+QR+ L +EEA
Sbjct: 67 VGDNKYQIIAGERRYRAIKKLNWQKIPAIVKKMDEKEAASMAVIENLQREGLTAIEEAES 126
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--S 201
Y +L+ TQ ++ +GKS++ VAN LR+LKL V+ I + +IS H R++V
Sbjct: 127 YRKLMDLNQLTQLELARAIGKSQAFVANKLRLLKLSPLVQRAILQRKISERHGRSIVSLP 186
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
+ + + I+ KK+SV++TE++V + K++K + E I
Sbjct: 187 EKKQVEILKKIIDKKLSVKETEKIVAQLKTPPVKKEKKKTNRKGTALDWRLAENTIKE-- 244
Query: 262 GLNISIKHRNNKGQFCIKYETNE----QLKIIC 290
SIK + G I+ +T+E + I
Sbjct: 245 ----SIKLASENG---IELKTSEEDHGEFHRII 270
>gi|90962567|ref|YP_536483.1| chromosome partitioning protein [Lactobacillus salivarius UCC118]
gi|90821761|gb|ABE00400.1| Chromosome partitioning protein [Lactobacillus salivarius UCC118]
Length = 280
Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 88/273 (32%), Positives = 144/273 (52%), Gaps = 15/273 (5%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
EK + E + I + N PR F E + +L ++I+SHG++QP+IVR
Sbjct: 7 KSKKEEKVEDDTQEKVQELPIEQVEVNEDQPRQVFSEESIAELAETIQSHGLLQPIIVRP 66
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
I + Y+IIAGERR+RA K + ++P I++ +D K + +A++EN+QR+ L +EEA
Sbjct: 67 IGDNKYQIIAGERRYRAIKKLNWQKIPAIVKKMDEKEAASMAVIENLQREGLTAIEEAES 126
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--S 201
Y +L+ TQ ++ +GKS++ VAN LR+LKL V+ I + EIS H R++V
Sbjct: 127 YRKLMDLNQLTQLELARAIGKSQAFVANKLRLLKLSPLVQRAILQREISERHGRSIVSLP 186
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
+ + + IV KK+SV++TE++V + K++K + E I
Sbjct: 187 EKKQVEILKKIVDKKLSVKETEKIVAQLKTPPVKKEKKKTNRKGTALDWRLAENTIKE-- 244
Query: 262 GLNISIKHRNNKGQFCIKYETNE----QLKIIC 290
SIK + G I+ +T+E + I
Sbjct: 245 ----SIKLASENG---IELKTSEEDHGEFHRII 270
>gi|255527595|ref|ZP_05394459.1| parB-like partition protein [Clostridium carboxidivorans P7]
gi|296186793|ref|ZP_06855194.1| ParB-like partition protein [Clostridium carboxidivorans P7]
gi|255508728|gb|EET85104.1| parB-like partition protein [Clostridium carboxidivorans P7]
gi|296048507|gb|EFG87940.1| ParB-like partition protein [Clostridium carboxidivorans P7]
Length = 258
Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 73/166 (43%), Positives = 110/166 (66%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E+ + I + I PN + PR +F+ E LE+L QSI ++GIIQPL VR I Y+++AGE
Sbjct: 2 QENINYIPVDLISPNVYQPRKHFDEESLEELAQSINTYGIIQPLSVRKIGEDKYELVAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK A L +VPVII ++ ++ S IA++EN+QR +LN LEEA Y LI ++ YTQ
Sbjct: 62 RRLRAAKKAGLEKVPVIIVDISDRESAAIALLENLQRDNLNFLEEAEAYYNLIKDHSYTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+ +GK +S +AN +R+L+L +R ++ + ++ HAR L+
Sbjct: 122 EKLAEAIGKKQSTIANKIRLLRLTPEIRNIVLENNLTERHARALLK 167
>gi|315284164|ref|ZP_07872078.1| nucleoid occlusion protein [Listeria marthii FSL S4-120]
gi|313612193|gb|EFR86421.1| nucleoid occlusion protein [Listeria marthii FSL S4-120]
Length = 290
Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
ID+ K E + + I PN PR F+ + +++L ++I+ HG+IQP++VR
Sbjct: 16 DDIDNDNKVAEEEVQRVQELPTDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVR 75
Query: 83 AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
++ Y+IIAGERRFRA L ++P II+N+D++ IA++EN+QR++L P+EEA
Sbjct: 76 EMEPDSYEIIAGERRFRAVLSLELEKIPAIIQNLDDEEVAAIALIENLQREELTPIEEAK 135
Query: 143 GYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVST 202
Y L+ TQ + VGKS+S +AN +R+LKLP ++++ + ++IS HAR+L++
Sbjct: 136 AYRSLLDMQEVTQEALAQRVGKSQSAIANKMRLLKLPETIQDAVLNKQISERHARSLLAL 195
Query: 203 SDPLSL---AQVIVSKKMSVRDTEELVQEQDN 231
I +V+ TE +QE
Sbjct: 196 ETEAQQVALLAEIEENHWNVKQTEARIQEILG 227
>gi|220930841|ref|YP_002507750.1| parB-like partition protein [Clostridium cellulolyticum H10]
gi|220001169|gb|ACL77770.1| parB-like partition protein [Clostridium cellulolyticum H10]
Length = 281
Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 89/228 (39%), Positives = 144/228 (63%), Gaps = 3/228 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+++ + ++ + I I PNP+ PR F LE+LC+SIK +G++QP+ VR + +G
Sbjct: 10 KQEKKEDQKNITYVGIDHIRPNPYQPRKQFNKMALEELCESIKQYGVLQPINVRRLSHGT 69
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+I+AGERR RAA MA L E+P II NVD+ S +A++EN+QR+DL+ +EEA GY LI
Sbjct: 70 YEIVAGERRLRAATMAGLMEIPAIIINVDDNDSAVMALIENLQREDLSYMEEAEGYSNLI 129
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
+E+G+TQ ++ +GKS+S VAN +R+LKL V++++ ++ HAR L+ D
Sbjct: 130 NEHGFTQEELAQKIGKSQSTVANKIRLLKLSPLVKKILSDNSLTERHARALLKLHDEQLQ 189
Query: 209 AQV---IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
+V + + ++V+ TEELV+ +K K K ++ K + D+
Sbjct: 190 LKVLRLVCERGLNVKKTEELVERAIDKYSKSIKQRASEKKMTKAIKDV 237
>gi|125974847|ref|YP_001038757.1| ParB family protein [Clostridium thermocellum ATCC 27405]
gi|256003896|ref|ZP_05428883.1| parB-like partition protein [Clostridium thermocellum DSM 2360]
gi|281418698|ref|ZP_06249717.1| parB-like partition protein [Clostridium thermocellum JW20]
gi|125715072|gb|ABN53564.1| ParB family protein [Clostridium thermocellum ATCC 27405]
gi|255992234|gb|EEU02329.1| parB-like partition protein [Clostridium thermocellum DSM 2360]
gi|281407782|gb|EFB38041.1| parB-like partition protein [Clostridium thermocellum JW20]
gi|316941969|gb|ADU76003.1| parB-like partition protein [Clostridium thermocellum DSM 1313]
Length = 278
Score = 79.7 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 89/248 (35%), Positives = 143/248 (57%), Gaps = 1/248 (0%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
++K E ++ ++I +I PNP+ PR F LE+LC+S+K +G+IQP+ VR I
Sbjct: 9 AKQKKEEEQKNIIYVNIENIRPNPYQPRKQFNKLALEELCESVKQYGVIQPISVRKISAN 68
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+Y+++AGERR RAA MA L+ VP II +VD+ S +A++EN+QR+DLN LEEA GY L
Sbjct: 69 MYELVAGERRLRAAAMAGLTTVPCIIVDVDDNDSAVLALIENLQREDLNYLEEAEGYSNL 128
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I+E+G+TQ ++ S +GKS+S +AN +R+LKLP V++++ ++ HAR L+ D
Sbjct: 129 INEHGFTQEELASKIGKSQSTIANKIRLLKLPPLVKKILMDNNLTERHARALLKLHDEQL 188
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL-NIS 266
+V+ + ++ + + EK E ++ T K I + +
Sbjct: 189 QLKVLKKVCEKGLNVKKTEELVEKAIEKYTMQKENEKKNNVKFTKAIKDIRIFINTIKQA 248
Query: 267 IKHRNNKG 274
I G
Sbjct: 249 IILMKKSG 256
>gi|152977680|ref|YP_001377197.1| parB-like partition protein [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|205829231|sp|A7GVP4|NOC_BACCN RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|152026432|gb|ABS24202.1| parB-like partition protein [Bacillus cytotoxicus NVH 391-98]
Length = 290
Score = 79.7 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 139/237 (58%), Gaps = 3/237 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ E+ +S E + I E I I +I+PN + PR F+ +++L +I++HG+IQ
Sbjct: 15 MSELEIQNESHEDINKKIHEEIHEIPIANIIPNRYQPRTVFDDARIDELALTIRTHGLIQ 74
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P++VR + Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L
Sbjct: 75 PIVVRQYEEDCYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTA 134
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLG 194
+EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 135 IEEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEDIKRSLLEKSITERHAR 194
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 195 ALIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEVKPKRKAKKKAVSRDMRIA 251
>gi|229917464|ref|YP_002886110.1| parB-like partition protein [Exiguobacterium sp. AT1b]
gi|229468893|gb|ACQ70665.1| parB-like partition protein [Exiguobacterium sp. AT1b]
Length = 294
Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 1 MSNNYSKRRLGRGLAALIG-EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M N ++K L G + + ++ +S+ + PN + PR FE
Sbjct: 1 MKNRFAK---------LFGVNRKDEVAVTQIAEVRADDTVQELSLSRLRPNRYQPRKVFE 51
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+E+L +I HG++QP++VR D Y+IIAGERRFRA K S +P I+R++D+
Sbjct: 52 PAKIEELATTISEHGLLQPIVVRKADGDCYEIIAGERRFRAVKSLGWSAIPAIVRDMDDD 111
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
++ +A++EN+QR+ L+P+EEA Y++L++ G TQ+ + +GKS+S +AN LR+LKLP
Sbjct: 112 TTAALALIENLQREQLSPIEEAEAYDRLLALNGLTQDALAKSLGKSQSTIANKLRLLKLP 171
Query: 180 SSVREMIRKEEISLGHARTLVS 201
V++ +R I+ HAR L+
Sbjct: 172 EDVKQSLRDRRINERHARALLP 193
>gi|293374961|ref|ZP_06621257.1| ParB-like protein [Turicibacter sanguinis PC909]
gi|292646438|gb|EFF64452.1| ParB-like protein [Turicibacter sanguinis PC909]
Length = 269
Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 93/248 (37%), Positives = 142/248 (57%), Gaps = 11/248 (4%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
S + + + + I IVPN + PRN F E + +L +SI+ HG+IQP++VR + +
Sbjct: 6 SKDDSHNQVKDEVTQLPIAKIVPNKYQPRNIFNDEKILELSESIREHGVIQPIVVRKLKD 65
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G Y+IIAGERR+RA+K+ L +VP IIR+ D+K S IAIVEN+QR+DL +EEAL Y+Q
Sbjct: 66 G-YEIIAGERRYRASKLIGLDKVPAIIRDYDDKKSASIAIVENIQREDLTAIEEALAYKQ 124
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTS 203
LI +G TQ + +GKS+S VAN +R+L L +V++ + + +I+ HAR +
Sbjct: 125 LIDLHGITQATLAKQMGKSQSTVANKIRLLNLSETVQQAVLERKITERHARALLVVKEEE 184
Query: 204 DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS----- 258
L L ++ K ++V +TE L+ E N +K K SR +
Sbjct: 185 LQLELLNKVIEKDLNVSETERLIDETLNPVQKPTKPKTISR-VPRDYRIAMNTFKQAIMM 243
Query: 259 -SKVGLNI 265
K G+ +
Sbjct: 244 VEKTGMKV 251
>gi|228994200|ref|ZP_04154100.1| Nucleoid occlusion protein [Bacillus pseudomycoides DSM 12442]
gi|229000270|ref|ZP_04159839.1| Nucleoid occlusion protein [Bacillus mycoides Rock3-17]
gi|228759602|gb|EEM08579.1| Nucleoid occlusion protein [Bacillus mycoides Rock3-17]
gi|228765652|gb|EEM14306.1| Nucleoid occlusion protein [Bacillus pseudomycoides DSM 12442]
Length = 290
Score = 79.7 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 139/236 (58%), Gaps = 3/236 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + I E I I +I+PN + PR F++ +++L +I++HG+IQP
Sbjct: 16 SEFELQNESHEEIDKKIHEEIQEIPIANIIPNRYQPRTVFDAARIDELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R + Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVIRKYEEDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGH 195
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ E
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKRALLEKSITERHARA 195
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
L + L + Q IV K+++V+ TEE + + + + ++K + + ++ +
Sbjct: 196 LIPLKNEELQLKVLQEIVEKQLNVKQTEERIAKLLEEVKPKRKAKQKAVSRDMRIA 251
>gi|256848572|ref|ZP_05554013.1| chromosome partitioning protein ParB [Lactobacillus coleohominis
101-4-CHN]
gi|256714624|gb|EEU29604.1| chromosome partitioning protein ParB [Lactobacillus coleohominis
101-4-CHN]
Length = 308
Score = 79.3 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 75/246 (30%), Positives = 130/246 (52%), Gaps = 13/246 (5%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K I + I PN + PR F+ EG+++L +I +HG++QP+I+R + Y
Sbjct: 12 KNHHDTKNEVVEIPLDQIEPNRYQPRQVFDEEGIQELAATIDAHGLLQPIILREYEPAKY 71
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERRFRA K+ + P I+ +++ + +A++EN+QR +L+ +EEA YE+L+
Sbjct: 72 EIIAGERRFRAMKLLQWEKAPAIVEKMNDHETASLALIENLQRSELSSVEEAQAYEKLMD 131
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLS 207
TQ + VGKS+S VAN LR+LKL V+ I I+ H R L ++
Sbjct: 132 LNHLTQAKLAKGVGKSQSAVANKLRLLKLIVPVQNAILDGLITERHGRALLNLNDDQQRK 191
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
+ IV++K++VR TE+ V K + + +++++++ + +
Sbjct: 192 MLMRIVNEKLNVRQTEDEVARLQGKPLPSEVEAQKE----------QERLANEENVKVK- 240
Query: 268 KHRNNK 273
K +
Sbjct: 241 KPKKRS 246
>gi|323141446|ref|ZP_08076336.1| nucleoid occlusion protein [Phascolarctobacterium sp. YIT 12067]
gi|322414102|gb|EFY04931.1| nucleoid occlusion protein [Phascolarctobacterium sp. YIT 12067]
Length = 292
Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 84/214 (39%), Positives = 129/214 (60%), Gaps = 3/214 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
++ + I I PNP+ PR F+ LE+L SI +G++QPL+V ++G Y
Sbjct: 19 ERKAVNEVKVVKVPIGQIFPNPYQPRKSFDEAALEELSASIAQYGVLQPLLVSPTEDGRY 78
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IAGERR RA++MA L+EVPVII + + EIA++EN+QR+DL+ LEEA GYEQL+
Sbjct: 79 LLIAGERRLRASRMAKLTEVPVIISDYTTQQIAEIALIENLQREDLHFLEEAEGYEQLME 138
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
++ TQ + + VGK +S +AN LR+L+L +VR+++ +S HAR L+ D
Sbjct: 139 QFHLTQEAMAARVGKKQSTIANKLRLLRLSPAVRKVLVDAGLSERHARALLKLDDDAKRL 198
Query: 210 QVIVS---KKMSVRDTEELVQEQDNKKEKRKKIF 240
+V+ K SVR TEE + + ++ K+
Sbjct: 199 EVLEVVVAKNYSVRQTEEYINKLLEDNQQEKRRR 232
>gi|300215179|gb|ADJ79595.1| Chromosome partitioning protein [Lactobacillus salivarius CECT
5713]
Length = 280
Score = 79.3 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 88/273 (32%), Positives = 144/273 (52%), Gaps = 15/273 (5%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
EK + E + I + N PR F E + +L ++I+SHG++QP+IVR
Sbjct: 7 KSKKEEKVEDDTQEKVQELPIEQVEVNEDQPRQVFSEESIAELAETIQSHGLLQPIIVRP 66
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
I + Y+IIAGERR+RA + + ++P I++ +D K + +A++EN+QR+ L +EEA
Sbjct: 67 IGDNKYQIIAGERRYRAIEKLNWQKIPAIVKKMDEKEAASMAVIENLQREGLTAIEEAES 126
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--S 201
Y +L+ TQ ++ +GKS++ VAN LR+LKL V+ I + EIS H R++V
Sbjct: 127 YRKLMDLNQLTQLELARAIGKSQAFVANKLRLLKLSPLVQRAILQREISERHGRSIVSLP 186
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
+ + + IV KK+SV++TE++V + K++K + E I
Sbjct: 187 EKKQVEILKKIVDKKLSVKETEKIVAQLKTPPVKKEKKKTNRKGTALDWRLAENTIKE-- 244
Query: 262 GLNISIKHRNNKGQFCIKYETNE----QLKIIC 290
SIK + G IK +T+E + I
Sbjct: 245 ----SIKLASENG---IKLKTSEEDHGEFHRII 270
>gi|288554598|ref|YP_003426533.1| DNA-binding protein Spo0J-like protein [Bacillus pseudofirmus OF4]
gi|288545758|gb|ADC49641.1| DNA-binding protein Spo0J-like protein [Bacillus pseudofirmus OF4]
Length = 279
Score = 79.0 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 84/231 (36%), Positives = 133/231 (57%), Gaps = 5/231 (2%)
Query: 25 IDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI 84
D E+ + E I+I IVPN PR F+ E +E+L Q+I++HG+IQP++VR
Sbjct: 12 SDKHEEVEVSGNEEVQQIAIADIVPNRFQPRTVFDEERIEELAQTIRTHGVIQPIVVRER 71
Query: 85 DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
D Y++IAGERR+RA ++P +++ ++ + IA++EN+QR+ L +EEA+ Y
Sbjct: 72 DGK-YELIAGERRWRAVTKLGWEKIPALVKEFNDSQTASIALIENLQREGLTSIEEAIAY 130
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVS 201
+LI +G TQ + +GK +S VAN LR+L LP V+ I + IS HAR L +
Sbjct: 131 AKLIELHGLTQESLAQRLGKGQSTVANKLRLLHLPEIVQHAILERHISERHARALLALKN 190
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQ-EQDNKKEKRKKIFEGSREKEKYLT 251
+ L + IV K ++V+ TEE V+ + + E +KK S K+ +
Sbjct: 191 EELQVQLLEEIVEKHLNVKQTEERVRVLLEGQPEPKKKATRKSYPKDMRIA 241
>gi|255018990|ref|ZP_05291116.1| hypothetical protein LmonF_16846 [Listeria monocytogenes FSL
F2-515]
Length = 198
Score = 79.0 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 112/178 (62%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ + + E + + + I PN PR F+ + +++L ++I+ HG+IQP++V
Sbjct: 3 KKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVV 62
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
R ++ Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L P+EEA
Sbjct: 63 REMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELTPIEEA 122
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
Y L+ TQ + VGKS+S +AN +R+LKLP +V+E + ++IS HAR+L
Sbjct: 123 KAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLIKQISERHARSL 180
>gi|303240048|ref|ZP_07326569.1| parB-like partition protein [Acetivibrio cellulolyticus CD2]
gi|302592317|gb|EFL62044.1| parB-like partition protein [Acetivibrio cellulolyticus CD2]
Length = 277
Score = 79.0 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 82/248 (33%), Positives = 143/248 (57%), Gaps = 2/248 (0%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+ + + ++ + I +I PNP+ PR F LE+LC+SIK +G+IQP+ VR + +
Sbjct: 9 AKVEKKDDLKNITYVGIDNIRPNPYQPRKQFNKISLEELCESIKQYGVIQPINVRKLSSN 68
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+Y+++AGERR RAA MA L E+P II ++++ S +A++EN+QR+DL+ +EEA GY L
Sbjct: 69 MYELVAGERRLRAATMAGLREIPAIIIDINDNDSAVLALIENLQREDLSYMEEAEGYNNL 128
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
IS++G+TQ ++ + +GKS+S +AN +R+LKLP V++++ ++ HAR L+ D
Sbjct: 129 ISDHGFTQEELAAKIGKSQSTIANKIRLLKLPPLVKKILADNSLTERHARALLKLHDEQL 188
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL-NIS 266
+V+ + + + + ++ K + K K+ + K I V +
Sbjct: 189 QLKVLKNVCEKGLNVKRTEDLVEKAIDRFTKQENEKKNKGKFTKAI-KDIRIFVNTIKQA 247
Query: 267 IKHRNNKG 274
I G
Sbjct: 248 IDLMKKSG 255
>gi|325844331|ref|ZP_08168107.1| nucleoid occlusion protein [Turicibacter sp. HGF1]
gi|325489198|gb|EGC91580.1| nucleoid occlusion protein [Turicibacter sp. HGF1]
Length = 273
Score = 79.0 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 93/248 (37%), Positives = 142/248 (57%), Gaps = 11/248 (4%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
S + + + + I IVPN + PRN F E + +L +SI+ HG+IQP++VR + +
Sbjct: 6 SKDDSHNQVKDEVTQLPIAKIVPNKYQPRNIFNDEKILELSESIREHGVIQPIVVRKLKD 65
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G Y+IIAGERR+RA+K+ L +VP IIR+ D+K S IAIVEN+QR+DL +EEAL Y+Q
Sbjct: 66 G-YEIIAGERRYRASKLIGLDKVPAIIRDYDDKKSASIAIVENIQREDLTAIEEALAYKQ 124
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTS 203
LI +G TQ + +GKS+S VAN +R+L L +V++ + + +I+ HAR +
Sbjct: 125 LIDLHGITQATLAKQMGKSQSTVANKIRLLNLSETVQQAVLERKITERHARALLVVKEEE 184
Query: 204 DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS----- 258
L L ++ K ++V +TE L+ E N +K K SR +
Sbjct: 185 LQLELLNKVIEKDLNVSETERLIDETLNPVQKPTKPKTISR-VPRDYRIAMNTFKQAIMM 243
Query: 259 -SKVGLNI 265
K G+ +
Sbjct: 244 VEKTGMKV 251
>gi|315305253|ref|ZP_07875209.1| nucleoid occlusion protein [Listeria ivanovii FSL F6-596]
gi|313626375|gb|EFR95552.1| nucleoid occlusion protein [Listeria ivanovii FSL F6-596]
Length = 285
Score = 79.0 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 126/218 (57%), Gaps = 4/218 (1%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G + + + E + + + I PN PR F+ + +++L ++I+ HG+I
Sbjct: 6 LFG-KKEKNNQLDDIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVI 64
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ Y+IIAGERRFRA + ++P II+N+D++ IA++EN+QR++L
Sbjct: 65 QPIVVREMEPDYYEIIAGERRFRAVLSLEMKKIPAIIQNLDDEEVAAIALIENLQREELT 124
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + VGKS+S +AN +R+LKLP ++++ + ++IS HA
Sbjct: 125 PIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPETIQKAVLNKQISERHA 184
Query: 197 RTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDN 231
R+L++ Q I +V+ TE +QE
Sbjct: 185 RSLLALETEEQQGSLLQEIEENHWNVKQTEARIQELLG 222
>gi|283471923|emb|CAQ51134.1| protein YyaA [Staphylococcus aureus subsp. aureus ST398]
Length = 279
Score = 78.6 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 85/274 (31%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E + + I I IVPN + PR FE
Sbjct: 1 MKKPFSK---------LFG-LKNKDDILGHIEEDRNSNVESIQIERIVPNRYQPRQVFEP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+++L +SI HG++QP++VR I+ +++IIAGERRFRA + +L + VIIR++D++
Sbjct: 51 NKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V +R+ +I+ HAR ++S SD A + ++++K++V+ TE+ V+++ ++ + +
Sbjct: 171 KVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQ 230
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
+++ + ++ K I + + ++H++
Sbjct: 231 NLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDK 264
>gi|82752287|ref|YP_418028.1| hypothetical protein SAB2585c [Staphylococcus aureus RF122]
gi|82657818|emb|CAI82273.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 279
Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E + + I I IVPN + PR FE
Sbjct: 1 MKKPFSK---------LFG-LKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+++L +SI HG++QP++VR I+ +++IIAGERRFRA + +L + VIIR++D++
Sbjct: 51 NKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V +R+ +I+ HAR ++S S+ A + ++++K++V+ TE+ V+++ ++ + +
Sbjct: 171 KVLLRLREGKITERHARAVLSLSNSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQ 230
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
+++ + ++ K I + + ++H++
Sbjct: 231 NLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDK 264
>gi|221636171|ref|YP_002524047.1| stage 0 sporulation protein J [Thermomicrobium roseum DSM 5159]
gi|221157758|gb|ACM06876.1| stage 0 sporulation protein J [Thermomicrobium roseum DSM 5159]
Length = 328
Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 7/211 (3%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
L+ + + + E I++ I P+P PR F+ E LE+L SI+ G
Sbjct: 18 DDLLADTSPQARGTRELAEA-----REIALDRIEPDPDQPRRTFDPERLEELAASIRQQG 72
Query: 75 IIQPLIVRAIDNGLYK-IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
++QP+ VR II GERR+RAA++A L +P I+R V ++ L ++EN+ R+
Sbjct: 73 VLQPIAVRYDATRDRYVIIHGERRWRAAQLAGLPTIPAIVRQVSDEQRLIQQLMENILRE 132
Query: 134 DLNPLEEALGYEQLISE-YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
DLN L+ A +L + + VG RS + +L KLP V+E IR +S
Sbjct: 133 DLNALDRAAALRRLKQQLGDVPWEQVAETVGIKRSRLFQLLATEKLPEPVQEAIRAGRLS 192
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTE 223
R L +PL +A + ++ + E
Sbjct: 193 EKQTRPLQGLPEPLQIAVAQLIEQDGLPQAE 223
>gi|15925699|ref|NP_373233.1| DNA-binding protein Spo0j-like protein [Staphylococcus aureus
subsp. aureus Mu50]
gi|15928294|ref|NP_375827.1| hypothetical protein SA2498 [Staphylococcus aureus subsp. aureus
N315]
gi|21284356|ref|NP_647444.1| hypothetical protein MW2627 [Staphylococcus aureus subsp. aureus
MW2]
gi|49487486|ref|YP_044707.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651103|ref|YP_187521.1| ParB family chromosome partioning protein [Staphylococcus aureus
subsp. aureus COL]
gi|87161183|ref|YP_495277.1| ParB family chromosome partioning protein ParB family
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88196664|ref|YP_501495.1| hypothetical protein SAOUHSC_03049 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148269140|ref|YP_001248083.1| parB-like partition protein [Staphylococcus aureus subsp. aureus
JH9]
gi|150395222|ref|YP_001317897.1| parB-like partition protein [Staphylococcus aureus subsp. aureus
JH1]
gi|151222821|ref|YP_001333643.1| chromosome partioning ParB family protein [Staphylococcus aureus
subsp. aureus str. Newman]
gi|156981024|ref|YP_001443283.1| hypothetical protein SAHV_2693 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161510918|ref|YP_001576577.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253316835|ref|ZP_04840048.1| ParB family chromosome partioning protein ParB family
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|253730394|ref|ZP_04864559.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733844|ref|ZP_04868009.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|255007480|ref|ZP_05146081.2| ParB family chromosome partioning protein ParB family
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257793533|ref|ZP_05642512.1| transcriptional regulator [Staphylococcus aureus A9781]
gi|258411161|ref|ZP_05681440.1| transcriptional regulator [Staphylococcus aureus A9763]
gi|258420935|ref|ZP_05683869.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258423243|ref|ZP_05686135.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|258438574|ref|ZP_05689797.1| chromosome partioning ParB family protein [Staphylococcus aureus
A9299]
gi|258443970|ref|ZP_05692308.1| chromosome partioning ParB family protein [Staphylococcus aureus
A8115]
gi|258446214|ref|ZP_05694374.1| chromosome partioning protein [Staphylococcus aureus A6300]
gi|258449127|ref|ZP_05697233.1| ParB family chromosome partioning protein [Staphylococcus aureus
A6224]
gi|258451372|ref|ZP_05699403.1| ParB family chromosome partioning protein ParB family
[Staphylococcus aureus A5948]
gi|258454395|ref|ZP_05702363.1| chromosome partioning ParB family protein [Staphylococcus aureus
A5937]
gi|262049464|ref|ZP_06022336.1| hypothetical protein SAD30_1391 [Staphylococcus aureus D30]
gi|262051895|ref|ZP_06024110.1| hypothetical protein SA930_0849 [Staphylococcus aureus 930918-3]
gi|269204346|ref|YP_003283615.1| ParB family chromosome partioning protein [Staphylococcus aureus
subsp. aureus ED98]
gi|282894274|ref|ZP_06302504.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8117]
gi|282902626|ref|ZP_06310519.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
C160]
gi|282918063|ref|ZP_06325813.1| chromosome partitioning protein [Staphylococcus aureus subsp.
aureus D139]
gi|282920714|ref|ZP_06328433.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A9765]
gi|282921285|ref|ZP_06329003.1| chromosome partitioning protein [Staphylococcus aureus subsp.
aureus C427]
gi|282927745|ref|ZP_06335359.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A10102]
gi|283767785|ref|ZP_06340700.1| chromosome partitioning protein ParB family protein [Staphylococcus
aureus subsp. aureus H19]
gi|284023032|ref|ZP_06377430.1| ParB family chromosome partioning protein [Staphylococcus aureus
subsp. aureus 132]
gi|294849823|ref|ZP_06790563.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A9754]
gi|295406859|ref|ZP_06816663.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8819]
gi|296275692|ref|ZP_06858199.1| ParB family chromosome partioning protein [Staphylococcus aureus
subsp. aureus MR1]
gi|297209457|ref|ZP_06925855.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297245894|ref|ZP_06929756.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8796]
gi|300911481|ref|ZP_07128930.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|13702666|dbj|BAB43806.1| SA2498 [Staphylococcus aureus subsp. aureus N315]
gi|14248484|dbj|BAB58871.1| DNA-binding protein Spo0j-like protein [Staphylococcus aureus
subsp. aureus Mu50]
gi|21205800|dbj|BAB96492.1| MW2627 [Staphylococcus aureus subsp. aureus MW2]
gi|49245929|emb|CAG44410.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285289|gb|AAW37383.1| chromosome partioning protein, ParB family [Staphylococcus aureus
subsp. aureus COL]
gi|87127157|gb|ABD21671.1| putative chromosome partioning protein, ParB family [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|87204222|gb|ABD32032.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147742209|gb|ABQ50507.1| Effector of nucleoid occlusion Noc [Staphylococcus aureus subsp.
aureus JH9]
gi|149947674|gb|ABR53610.1| parB-like partition protein [Staphylococcus aureus subsp. aureus
JH1]
gi|150375621|dbj|BAF68881.1| chromosome partioning ParB family protein [Staphylococcus aureus
subsp. aureus str. Newman]
gi|156723159|dbj|BAF79576.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160369727|gb|ABX30698.1| possible transcriptional regulator [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253725874|gb|EES94603.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728147|gb|EES96876.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|257787505|gb|EEV25845.1| transcriptional regulator [Staphylococcus aureus A9781]
gi|257840046|gb|EEV64511.1| transcriptional regulator [Staphylococcus aureus A9763]
gi|257843125|gb|EEV67540.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257846572|gb|EEV70594.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|257848133|gb|EEV72125.1| chromosome partioning ParB family protein [Staphylococcus aureus
A9299]
gi|257850854|gb|EEV74798.1| chromosome partioning ParB family protein [Staphylococcus aureus
A8115]
gi|257855040|gb|EEV77983.1| chromosome partioning protein [Staphylococcus aureus A6300]
gi|257857560|gb|EEV80455.1| ParB family chromosome partioning protein [Staphylococcus aureus
A6224]
gi|257860902|gb|EEV83719.1| ParB family chromosome partioning protein ParB family
[Staphylococcus aureus A5948]
gi|257863489|gb|EEV86249.1| chromosome partioning ParB family protein [Staphylococcus aureus
A5937]
gi|259160222|gb|EEW45251.1| hypothetical protein SA930_0849 [Staphylococcus aureus 930918-3]
gi|259162461|gb|EEW47031.1| hypothetical protein SAD30_1391 [Staphylococcus aureus D30]
gi|262076636|gb|ACY12609.1| ParB family chromosome partioning protein [Staphylococcus aureus
subsp. aureus ED98]
gi|282315700|gb|EFB46084.1| chromosome partitioning protein [Staphylococcus aureus subsp.
aureus C427]
gi|282318348|gb|EFB48708.1| chromosome partitioning protein [Staphylococcus aureus subsp.
aureus D139]
gi|282590505|gb|EFB95583.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A10102]
gi|282594122|gb|EFB99110.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A9765]
gi|282597085|gb|EFC02044.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
C160]
gi|282763319|gb|EFC03449.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8117]
gi|283461664|gb|EFC08748.1| chromosome partitioning protein ParB family protein [Staphylococcus
aureus subsp. aureus H19]
gi|285818372|gb|ADC38859.1| Chromosome (plasmid) partitioning protein ParB [Staphylococcus
aureus 04-02981]
gi|294823371|gb|EFG39800.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A9754]
gi|294968324|gb|EFG44349.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8819]
gi|296885918|gb|EFH24853.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297177259|gb|EFH36512.1| ParB family chromosome partitioning protein [Staphylococcus aureus
A8796]
gi|298695965|gb|ADI99187.1| chromosome partioning protein, ParB family [Staphylococcus aureus
subsp. aureus ED133]
gi|300887660|gb|EFK82856.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|302334323|gb|ADL24516.1| ParB family nucleoid occlusion protein, Noc [Staphylococcus aureus
subsp. aureus JKD6159]
gi|312831047|emb|CBX35889.1| protein yyaA [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129538|gb|EFT85530.1| possible transcriptional regulator [Staphylococcus aureus subsp.
aureus CGS03]
gi|315197913|gb|EFU28246.1| possible transcriptional regulator [Staphylococcus aureus subsp.
aureus CGS01]
gi|320141412|gb|EFW33255.1| ParB-like partition protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320144395|gb|EFW36160.1| ParB-like partition protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323439704|gb|EGA97422.1| ParB family chromosome partioning protein ParB family
[Staphylococcus aureus O11]
gi|323443277|gb|EGB00894.1| ParB family chromosome partioning protein ParB family
[Staphylococcus aureus O46]
gi|329725849|gb|EGG62328.1| nucleoid occlusion protein [Staphylococcus aureus subsp. aureus
21172]
gi|329731891|gb|EGG68251.1| nucleoid occlusion protein [Staphylococcus aureus subsp. aureus
21189]
gi|329732508|gb|EGG68858.1| nucleoid occlusion protein [Staphylococcus aureus subsp. aureus
21193]
Length = 279
Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 85/274 (31%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E + + I I IVPN + PR FE
Sbjct: 1 MKKPFSK---------LFG-LKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+++L +SI HG++QP++VR I+ +++IIAGERRFRA + +L + VIIR++D++
Sbjct: 51 NKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V +R+ +I+ HAR ++S SD A + ++++K++V+ TE+ V+++ ++ + +
Sbjct: 171 KVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQ 230
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
+++ + ++ K I + + ++H++
Sbjct: 231 NLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDK 264
>gi|313112545|ref|ZP_07798210.1| ParB-like partition protein [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310625145|gb|EFQ08435.1| ParB-like partition protein [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 265
Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 121/225 (53%), Gaps = 2/225 (0%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ + + I I P+P R F + L L QSI+ +G++QP+ VR + +G Y+
Sbjct: 3 ERKKQAGKIYFLPIDQIRPSPFQARREFSEQELAALAQSIRENGLLQPISVRKVSDGGYE 62
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
++AGERR RA ++A +S +P I+ + D++ + + ++EN+QR DLNP E+A G + ++
Sbjct: 63 LVAGERRLRACRLAKMSTIPAILCDYDDERTAALGLLENIQRADLNPFEQAQGLKDVMVL 122
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSL 208
+ TQ + +G ++ +AN LR+L+L + R+ + ++ HAR + + +
Sbjct: 123 WDCTQAEAAKRLGMAQPTLANKLRLLQLNADQRQFVLDNSLTERHARAVLRLPENRRSEA 182
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
I ++M+ R T+ +++ N K + ++ ++ +
Sbjct: 183 LINIAKRRMNARQTDLYIEQLLNTPAKGRHRISMVKDVRIFVNTI 227
>gi|116874153|ref|YP_850934.1| ParB family chromosome partioning protein [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|123458785|sp|A0AMC3|NOC_LISW6 RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|116743031|emb|CAK22155.1| chromosome partition protein, ParB family [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 284
Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 128/218 (58%), Gaps = 5/218 (2%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L G + + + E + + + I PN PR F+ + +++L ++I+ HG+I
Sbjct: 6 LFG--KKEKNQMDDIVEEGVQRVLELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVI 63
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QP++VR ++ Y+IIAGERRFRA L ++P II+N+D++ IA++EN+QR++L
Sbjct: 64 QPIVVREMEPDYYEIIAGERRFRAVLSLELEKIPAIIQNLDDEEVAAIALIENLQREELT 123
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P+EEA Y L+ TQ + VGKS+S +AN LR+LKLP +V++ + ++IS HA
Sbjct: 124 PIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKLRLLKLPEAVQQAVLNKQISERHA 183
Query: 197 RTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
R+L+ + + + L I +V+ TE +QE
Sbjct: 184 RSLLALETEATQVDLLAEIEENHWNVKQTEARIQEILG 221
>gi|255349079|ref|ZP_05381086.1| putative chromosome partitioning protein [Chlamydia trachomatis 70]
gi|255503617|ref|ZP_05382007.1| putative chromosome partitioning protein [Chlamydia trachomatis
70s]
gi|255507296|ref|ZP_05382935.1| putative chromosome partitioning protein [Chlamydia trachomatis
D(s)2923]
gi|158562073|gb|ABA42621.2| chromosome partitioning protein [Chlamydia trachomatis]
gi|158562075|gb|ABA42624.2| chromosome partitioning protein [Chlamydia trachomatis]
gi|289525732|emb|CBJ15213.1| putative chromosome partitioning protein [Chlamydia trachomatis
Sweden2]
gi|296435303|gb|ADH17481.1| putative chromosome partitioning protein [Chlamydia trachomatis
E/150]
gi|296439021|gb|ADH21174.1| putative chromosome partitioning protein [Chlamydia trachomatis
E/11023]
Length = 281
Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 11/256 (4%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLY 89
++ ++I I +P PR F E L++L SIK+ G+I P +VR Y
Sbjct: 5 PSEDTLLEVNIEDIRVSPFQPRRTFLEEDLKELVLSIKAVGLIHPPVVREIRNGDKVLYY 64
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
++IAGERR+RA ++A VPV+++ V + + E ++EN+QR +LNPLE A + +LI
Sbjct: 65 ELIAGERRWRALQLAGYKTVPVVLKQVLADDMAAEATLIENIQRVNLNPLEMAEAFRRLI 124
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDP 205
+G TQ+ + VGK RS VAN LR+ LP V+E + EISLGHA+ ++ +
Sbjct: 125 VVFGLTQDKVAKKVGKKRSTVANYLRLFSLPQEVQEKMNSGEISLGHAKVILSLEDENLR 184
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
L+Q I+S K++VR+ E + K K S+ + L ++++++ G +
Sbjct: 185 QILSQKIISCKLAVREAEMEAKRLVKGKGASLKEASSSQPSSR-LEFCQERLATTFGYPV 243
Query: 266 SIKHRNNKGQFCIKYE 281
++K + + C+ +
Sbjct: 244 TVKPQGR--RICVSFF 257
>gi|326202763|ref|ZP_08192630.1| parB-like partition protein [Clostridium papyrosolvens DSM 2782]
gi|325986840|gb|EGD47669.1| parB-like partition protein [Clostridium papyrosolvens DSM 2782]
Length = 282
Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 140/221 (63%), Gaps = 3/221 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+++ + ++ + I I PNP+ PR F LE+LC SIK +G++QP+ VR + +G
Sbjct: 10 KQEKKEDQKNITYVGIDHIRPNPYQPRKQFNKMALEELCDSIKQYGVLQPINVRRLSHGT 69
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+++AGERR RAA MA L E+P II NVD+ S +A++EN+QR+DL+ +EEA GY LI
Sbjct: 70 YELVAGERRLRAATMAGLQEIPAIIINVDDNDSAVMALIENLQREDLSYMEEAEGYSNLI 129
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
+E+G+TQ ++ +GKS+S +AN +R+LKL +++++ ++ HAR L+ D
Sbjct: 130 NEHGFTQEELAQKIGKSQSTIANKIRLLKLSPLIKKILSDNNLTERHARALLKLHDEQLQ 189
Query: 209 AQV---IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+V + + ++V+ TEELV+ +K K K S +K
Sbjct: 190 LKVLRLVCERGLNVKKTEELVERAIDKYSKNIKQRTTSEKK 230
>gi|221141510|ref|ZP_03566003.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|304379943|ref|ZP_07362672.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|269942295|emb|CBI50710.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
TW20]
gi|302752586|gb|ADL66763.1| ParB family nucleoid occlusion protein, Noc [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304341523|gb|EFM07433.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|329315429|gb|AEB89842.1| ParB family nucleoid occlusion protein, Noc [Staphylococcus aureus
subsp. aureus T0131]
Length = 279
Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 87/274 (31%), Positives = 162/274 (59%), Gaps = 14/274 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E + + I I IVPN + PR FE
Sbjct: 1 MKKPFSK---------LFG-LKNKDDIIGHIEENRNSNVESIQIERIVPNRYQPRQVFEP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+++L +SI HG++QP++VR I+ +++IIAGERRFRA + +L + VIIR++D++
Sbjct: 51 NKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V +R+ +I+ HAR ++S SD A + ++++K++V+ TE+ V+++ ++ + +
Sbjct: 171 KVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQ 230
Query: 239 IFEGSREKEKYLTDLEKKIS--SKVGLNISIKHR 270
++ + ++ K I ++GL++ K +
Sbjct: 231 NLRFEQDVTQARDEVGKSIQAIQQIGLHVEHKDK 264
>gi|296273875|ref|YP_003656506.1| parB-like partition protein [Arcobacter nitrofigilis DSM 7299]
gi|296098049|gb|ADG93999.1| parB-like partition protein [Arcobacter nitrofigilis DSM 7299]
Length = 293
Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 85/274 (31%), Positives = 152/274 (55%), Gaps = 10/274 (3%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL- 79
V + +S + + ++SI PNP PR F+ + L++L SIK HG+IQ +
Sbjct: 17 VESAYESNNSSSSKERGMDIYLDVNSIKPNPAQPRKIFDEDKLKELSDSIKEHGLIQAIS 76
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
++ + + G Y +IAGERR RA K+A++ ++ I ++D+ EIA++EN+QR DLN +E
Sbjct: 77 VIESSEYGEYILIAGERRLRAHKLANIDKIKANILDIDSDKLREIALIENIQRDDLNVIE 136
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
A Y QLI+E+ T ++ V KSR+ + N LR+L+L S V++M+ ++I+ GHA+ +
Sbjct: 137 LAYSYAQLINEHSLTHEELSVKVFKSRTSITNTLRLLQLSSYVQQMLANDKITAGHAKIM 196
Query: 200 V--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG-SREKEKY-LTDLEK 255
V + I+ +K+SVR+TE L+++ + K + + + L +
Sbjct: 197 VGLDEETQRKVTDSIIGQKLSVRETELLIKDIKKPETSSVKKTKSLPKNYDLNPLNSVVD 256
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYETNEQLKII 289
++S N+ +K N + I ++ E ++ I
Sbjct: 257 ELSKN---NLKVKLEKNCFKIEI--KSQEDIEKI 285
>gi|228911321|ref|ZP_04075125.1| Nucleoid occlusion protein [Bacillus thuringiensis IBL 200]
gi|228848339|gb|EEM93189.1| Nucleoid occlusion protein [Bacillus thuringiensis IBL 200]
Length = 201
Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 68/183 (37%), Positives = 116/183 (63%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +++L +I++HG+IQP
Sbjct: 16 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIDELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
++VR ++ Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVVRQYEDDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ I+ HAR
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKSALLEKSITERHARA 195
Query: 199 LVS 201
L+
Sbjct: 196 LIP 198
>gi|114568073|ref|YP_755227.1| transcriptional regulator [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114339008|gb|ABI69856.1| transcriptional regulator [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 284
Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 80/214 (37%), Positives = 132/214 (61%), Gaps = 4/214 (1%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
++ I + + PNP PR F+ + +L QSI+++GIIQP+IVR D+G ++II
Sbjct: 12 KSSEVKVTGIPVEKLYPNPFQPRKDFDEREMMELAQSIEAYGIIQPIIVRTRDDG-FQII 70
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERRFRA + + E+P II+ +D++ I+++EN+QR++LN EEA Y +LI+ +G
Sbjct: 71 AGERRFRACCLLGIREIPAIIQEMDDERVATISLIENLQRRELNYFEEANAYNRLINGFG 130
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA--- 209
TQ ++ +GKS++ +AN +R+LKLP SV+ +I E IS HAR L+ +
Sbjct: 131 LTQEELARKIGKSQAAIANKIRLLKLPLSVQSLILPERISERHARALLKLNSAEMQLEVV 190
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ I K+++V++TEELV+ ++ +
Sbjct: 191 KQIYEKELTVKETEELVEGISRNNIPQEIGRKPK 224
>gi|49484904|ref|YP_042128.1| DNA-binding protein [Staphylococcus aureus subsp. aureus MRSA252]
gi|257424191|ref|ZP_05600620.1| chromosome partitioning ParB family protein [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257426868|ref|ZP_05603270.1| ParB family chromosome partioning protein ParB family
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257429504|ref|ZP_05605891.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432151|ref|ZP_05608514.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435112|ref|ZP_05611163.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282907042|ref|ZP_06314890.1| chromosome partitioning protein ParB family protein [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282910021|ref|ZP_06317829.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282912269|ref|ZP_06320065.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282912909|ref|ZP_06320701.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
M899]
gi|282922537|ref|ZP_06330227.1| ParB family chromosome partitioning protein [Staphylococcus aureus
subsp. aureus C101]
gi|283959479|ref|ZP_06376920.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293497962|ref|ZP_06665816.1| ParB family chromosome partitioning protein [Staphylococcus aureus
subsp. aureus 58-424]
gi|293511552|ref|ZP_06670246.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
M809]
gi|293550161|ref|ZP_06672833.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
M1015]
gi|295429292|ref|ZP_06821914.1| ParB family chromosome partitioning protein [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|297589206|ref|ZP_06947847.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
MN8]
gi|49243033|emb|CAG41767.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257273209|gb|EEV05311.1| chromosome partitioning ParB family protein [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257276499|gb|EEV07950.1| ParB family chromosome partioning protein ParB family
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257279985|gb|EEV10572.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257283030|gb|EEV13162.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285708|gb|EEV15824.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282314758|gb|EFB45144.1| ParB family chromosome partitioning protein [Staphylococcus aureus
subsp. aureus C101]
gi|282323009|gb|EFB53328.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
M899]
gi|282323965|gb|EFB54281.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326087|gb|EFB56392.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329941|gb|EFB59462.1| chromosome partitioning protein ParB family protein [Staphylococcus
aureus subsp. aureus Btn1260]
gi|283789071|gb|EFC27898.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919208|gb|EFD96284.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
M1015]
gi|291096893|gb|EFE27151.1| ParB family chromosome partitioning protein [Staphylococcus aureus
subsp. aureus 58-424]
gi|291465510|gb|EFF08042.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
M809]
gi|295127051|gb|EFG56695.1| ParB family chromosome partitioning protein [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|297577717|gb|EFH96430.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
MN8]
gi|312436864|gb|ADQ75935.1| stage 0 DNA-binding protein [Staphylococcus aureus subsp. aureus
TCH60]
gi|315195221|gb|EFU25609.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
CGS00]
Length = 279
Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 85/274 (31%), Positives = 161/274 (58%), Gaps = 12/274 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E + + I I IVPN + PR FE
Sbjct: 1 MKKPFSK---------LFG-LKNKDDIIGHIEENRNSNVESIQIERIVPNRYQPRQVFEP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+++L +SI HG++QP++VR I+ +++IIAGERRFRA + +L + VIIR++D++
Sbjct: 51 NKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V +R+ +I+ HAR ++S SD A + ++++K++V+ TE+ V+++ ++ + +
Sbjct: 171 KVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQ 230
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
++ + ++ K I + + ++H++
Sbjct: 231 NLRFEQDVTQARDEVGKSIQAIQQTGLHVEHKDK 264
>gi|143640|gb|AAA62694.1| spo0J [Bacillus subtilis]
Length = 178
Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 94/172 (54%), Gaps = 4/172 (2%)
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QR+DL+PLEEA Y+ L+ TQ + +GKSR H AN LR+L LP +++++I
Sbjct: 8 ENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHNANHLRLLTLPENIQQLIA 67
Query: 188 K--EEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ L + + L Q +++++++VR E+L+Q+ + + K +
Sbjct: 68 EALSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETK--KKEPV 125
Query: 246 KEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
K+ L + E + + G ++IK + KG+ I++ +NE L I LL E +
Sbjct: 126 KDAVLKERESYLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERE 177
>gi|309390342|gb|ADO78222.1| parB-like partition protein [Halanaerobium praevalens DSM 2228]
Length = 266
Score = 78.2 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 89/256 (34%), Positives = 149/256 (58%), Gaps = 4/256 (1%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ +T + + + I NP PR F+ +++L QSI + G+IQ + VR + +G
Sbjct: 7 SRSKKTKNDQIVELKLDQIKVNPFQPRQTFKQSEIKELAQSISNFGLIQAITVRELADG- 65
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y++IAGERR RAAK +P +I+++ ++ EIA++EN+QRKDL+ LEEA Y++L+
Sbjct: 66 YELIAGERRLRAAKYLEKKTIPAVIKDLSDQEMAEIALIENLQRKDLSFLEEAQAYQRLL 125
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
E+ TQ ++ + V KS+S ++N LR+LKL + VRE I ++S H+R L+ +D
Sbjct: 126 VEFDLTQKELAARVAKSQSTISNKLRLLKLEAEVREKILAADLSERHSRALLQLNDAQKQ 185
Query: 209 A---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
+ I K ++VR++E+L++ +K+KKI + + Y LEK+I I
Sbjct: 186 LAAIKKIKEKSLNVRESEKLIKRIKKPVKKQKKIKHLADDLRLYANSLEKRIEEIEASGI 245
Query: 266 SIKHRNNKGQFCIKYE 281
I+ NK + I+Y
Sbjct: 246 KIELEKNKEKNSIEYY 261
>gi|329769239|ref|ZP_08260658.1| hypothetical protein HMPREF0433_00422 [Gemella sanguinis M325]
gi|328839370|gb|EGF88950.1| hypothetical protein HMPREF0433_00422 [Gemella sanguinis M325]
Length = 283
Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 138/264 (52%), Gaps = 9/264 (3%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
++ EK + + I I IVPN + PR F + +++L +SIK +G++Q
Sbjct: 8 FSKLYDLTQRAEKVGISDDDVLREIRIEKIVPNKYQPRREFTEDKIKELAESIKQNGLLQ 67
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
+ VR + NG Y++IAGERR RA K I++ + N+ +A++EN+QR++L P
Sbjct: 68 SITVRDMGNGFYELIAGERRLRALKYLEYPTTKAIVKELTNEQMATLALIENIQREELTP 127
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EEA Y++L+S TQ+++ +GK+++ VAN LR+LKL S V + I + I+ H R
Sbjct: 128 IEEAYAYQELLSINNLTQDELAKSLGKTQATVANKLRLLKLCSKVVDAINSKRITERHGR 187
Query: 198 TLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY--LTDL 253
+V S + I+++ ++V TEE ++ K + K + L L
Sbjct: 188 AMVKLDPSAQEKILNQILTQSLNVSQTEERIETYLRIKNETKNNDSTQPNYDAQKILARL 247
Query: 254 EK---KISSKVGLNISIKHRNNKG 274
K K+ K G +S+ +G
Sbjct: 248 TKDIAKLEEKYG--VSLNKEEEEG 269
>gi|255016950|ref|ZP_05289076.1| partition protein ParB homolg [Listeria monocytogenes FSL F2-515]
Length = 155
Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
TQ + VGKSR ++AN +R+L LP V+ M+R +S GH R L+ ++
Sbjct: 9 TQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLRDGSLSAGHGRVLLGLKLKKNIIPTAK 68
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK 273
+L +N E + ++ + E ++ K G +SIK R+ K
Sbjct: 69 KAVAQGLTVRQLEDVVNNLNENVSRETIKPARVPIFIRESESQLRDKFGTAVSIKRRDKK 128
Query: 274 GQFCIKYETNEQLKIICSLL 293
G+ I++ +++ L I +L
Sbjct: 129 GKIEIEFLSDDDLDRILEIL 148
>gi|194016377|ref|ZP_03054991.1| protein YyaA [Bacillus pumilus ATCC 7061]
gi|194011850|gb|EDW21418.1| protein YyaA [Bacillus pumilus ATCC 7061]
Length = 291
Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 134/238 (56%), Gaps = 5/238 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E I++ + +T+ E + + +I+PN PR F E + +L +I +HGIIQP
Sbjct: 17 PERETEIEAEIAEHDTLKEEIQELPVDTIMPNRFQPRTIFSEEKIHELATTIHTHGIIQP 76
Query: 79 LIVRAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
++VR + Y++IAGERR+RA + ++P II++ + + +A++EN+QR++L+
Sbjct: 77 IVVRPTEEEGKYELIAGERRWRAVQTLHWEKIPAIIKDFTDTETASVALIENLQREELSA 136
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EEA Y +L+ + TQ + +GK +S VAN LR+LKLP V++ I +++IS HAR
Sbjct: 137 IEEAHAYARLLELHDLTQEALAQRLGKGQSTVANKLRLLKLPEEVQQAILEKKISERHAR 196
Query: 198 TLVSTSDPLSL----AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+LV P ++I + + E +V+ + K +++ K + ++ +
Sbjct: 197 SLVPLKLPELQIALLQEIIEKQLNVKQTEERVVKMLEQKTDRKPKPKRKAFSRDTRIA 254
>gi|256851846|ref|ZP_05557234.1| chromosome partitioning protein [Lactobacillus jensenii 27-2-CHN]
gi|260661893|ref|ZP_05862803.1| chromosome partitioning protein [Lactobacillus jensenii 115-3-CHN]
gi|282931976|ref|ZP_06337440.1| nucleoid occlusion protein [Lactobacillus jensenii 208-1]
gi|297205470|ref|ZP_06922866.1| chromosome partitioning protein SpoOJ [Lactobacillus jensenii
JV-V16]
gi|256615804|gb|EEU20993.1| chromosome partitioning protein [Lactobacillus jensenii 27-2-CHN]
gi|260547362|gb|EEX23342.1| chromosome partitioning protein [Lactobacillus jensenii 115-3-CHN]
gi|281303918|gb|EFA96056.1| nucleoid occlusion protein [Lactobacillus jensenii 208-1]
gi|297150048|gb|EFH30345.1| chromosome partitioning protein SpoOJ [Lactobacillus jensenii
JV-V16]
Length = 280
Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 78/264 (29%), Positives = 150/264 (56%), Gaps = 10/264 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+K + + + I+PN + PR+ F +E L Q+++ G++QP++VR
Sbjct: 6 SKKNEIPKEKQIQDLELSKIIPNRYQPRHEFSEASIEQLAQTLEQEGLLQPIVVREKG-E 64
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y+IIAGERRFRAAK + + +P I++N+D++ + +A++EN+QR++LNP++EA YE L
Sbjct: 65 NYEIIAGERRFRAAKSLNWTTIPAIVQNMDDQKAASLALIENLQRENLNPIDEARAYEDL 124
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDP 205
+ TQ + +GKS+S++AN LR+LKL V+ + I+ H R + ++ +
Sbjct: 125 MKLNELTQTALAKDMGKSQSYIANKLRLLKLEPEVQSYLVSGAITARHGRAMLGLTPVEQ 184
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL---EKKISSKVG 262
+ I+ KK+SV++TE + ++ D K+ + + + +KE + K + ++
Sbjct: 185 SHVLHEILQKKLSVKETEAICEDVDGYFAKKAEEVKKATQKEPEKKRVVKTAKDLKVQIN 244
Query: 263 L-NISIKHRNNKGQFCIKYETNEQ 285
++K + G I+ +++E+
Sbjct: 245 TIKQAVKLAKDSG---IEVKSHEE 265
>gi|165978530|gb|ABY76710.1| ParB [Chlamydia trachomatis]
Length = 281
Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 11/256 (4%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLY 89
++ ++I I +P PR F E L++L SIK+ G+I P +VR Y
Sbjct: 5 PSEDTLLEVNIEDIRVSPFQPRRTFLEEDLKELVLSIKTVGLIHPPVVREIRNGDKVLYY 64
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
++IAGERR+RA ++A VPV+++ V + + E ++EN+QR +LNPLE A + +LI
Sbjct: 65 ELIAGERRWRALQLAGYKTVPVVLKQVLADDMAAEATLIENIQRVNLNPLEMAEAFRRLI 124
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDP 205
+G TQ+ + VGK RS VAN LR+ LP V+E + EISLGHA+ ++ +
Sbjct: 125 VVFGLTQDKVAKKVGKKRSTVANYLRLFSLPQEVQEKMNSGEISLGHAKVILSLEDENLR 184
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
L+Q I+S K++VR+ E + K K + S + L ++++++ G +
Sbjct: 185 QILSQKIISCKLAVREAEMEAKRLVKGKGASLK-EDSSSQPSSRLGFCQERLATTFGYPV 243
Query: 266 SIKHRNNKGQFCIKYE 281
++K + + C+ +
Sbjct: 244 TVKSQGR--RICVSFF 257
>gi|223043495|ref|ZP_03613541.1| protein YyaA [Staphylococcus capitis SK14]
gi|314934966|ref|ZP_07842325.1| putative DNA-binding protein [Staphylococcus caprae C87]
gi|222443284|gb|EEE49383.1| protein YyaA [Staphylococcus capitis SK14]
gi|313652896|gb|EFS16659.1| putative DNA-binding protein [Staphylococcus caprae C87]
Length = 279
Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 161/274 (58%), Gaps = 14/274 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E + + I I IVPN + PR FE
Sbjct: 1 MKKPFSK---------LFG-LKNKDDIVGYTEEERNNNVESIHIERIVPNRYQPRQVFEP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +L +SI+ HG++QP++VR I+ +++IIAGERRFRA + + VIIR+++++
Sbjct: 51 NKIRELAESIEEHGLLQPIVVRPIEEDMFEIIAGERRFRALQSLHKPQADVIIRHMNDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+V + +R+ +I+ HAR ++ + L + ++++K++V+ TE+ V+++ ++ + +
Sbjct: 171 NVIKRLREGKITERHARAVLVLPEDEQEELIEQVINQKLNVKQTEDKVRQKTGPEKVKAQ 230
Query: 239 IFEGSREKEKYLTDLEKKIS--SKVGLNISIKHR 270
F+ S++ + ++ K I + GL + K +
Sbjct: 231 TFQFSQDVTQARDEVGKSIEAIEQSGLRVEHKDK 264
>gi|227893999|ref|ZP_04011804.1| stage 0 DNA-binding protein [Lactobacillus ultunensis DSM 16047]
gi|227864200|gb|EEJ71621.1| stage 0 DNA-binding protein [Lactobacillus ultunensis DSM 16047]
Length = 272
Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 72/261 (27%), Positives = 137/261 (52%), Gaps = 5/261 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + + IVPN + PR F + +++L +++ G++QP++VR D Y+IIAGE
Sbjct: 10 NKQIQDLELDKIVPNRYQPRRSFSDDSIKELAETLDKDGLLQPIVVRE-DGDQYEIIAGE 68
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAA+ +P I+ N+D+ + +A++EN+QR+DLNP++EA Y L+ TQ
Sbjct: 69 RRYRAAQSLGWKTIPAIVNNMDDDQAASLALIENLQREDLNPIDEAKAYTNLMKLNDLTQ 128
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+ +GKS+S+VAN LR+LKL V++ + +I+ H R L+ SD + +
Sbjct: 129 TALAKDMGKSQSYVANKLRLLKLGDDVQQALIDGKITARHGRALIGLSDEDQKRVLAEVE 188
Query: 216 KMSVR-DTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL-NISIKHRNNK 273
+ + E + + + + E++ + + K + ++ +IK +
Sbjct: 189 EKGLTVKQTEEIAKDVDGYFNPAPKKKAKPEQKHVTSRIPKDLKVQINTIKKAIKLAKDS 248
Query: 274 G-QFCI-KYETNEQLKIICSL 292
G + + + + + KI+ L
Sbjct: 249 GIKVKVKEDKDPDDYKIMIEL 269
>gi|239631037|ref|ZP_04674068.1| effector of nucleoid occlusion Noc [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301065358|ref|YP_003787381.1| Spo0J-like protein, ParB-like nuclease domain [Lactobacillus casei
str. Zhang]
gi|239527320|gb|EEQ66321.1| effector of nucleoid occlusion Noc [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300437765|gb|ADK17531.1| Spo0J-like protein, ParB-like nuclease domain [Lactobacillus casei
str. Zhang]
Length = 276
Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 12/234 (5%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+++ G ++ + + +IVPN PR F E + +L +IK H
Sbjct: 3 LSSIFGHKKPDDETV----------VQQLPMTAIVPNQFQPRKVFTPESIRELATTIKDH 52
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++QP+IVR Y+IIAGERR+RA + + P I++ +D+ S +A+VEN+QR+
Sbjct: 53 GLLQPIIVREYKPEKYEIIAGERRYRAMQTLGWEKAPAIVQKMDDDESASMALVENLQRE 112
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
L+ +EE Y L+ TQ + +GKS++ VAN +R+LKL V+E + K IS
Sbjct: 113 GLSAIEEGQAYVALMKLNHLTQAALAEQLGKSQAFVANKIRLLKLSEPVQEALMKSRISE 172
Query: 194 GHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
H R L+ + +A I + ++V++T L+ E K+ K R
Sbjct: 173 RHGRELLKLDEKQQVAALHQIFADDLTVKETSALINEMLRPKKPTPKPKPKVRR 226
>gi|325126526|gb|ADY85856.1| Chromosome partitioning protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 274
Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 86/253 (33%), Positives = 142/253 (56%), Gaps = 9/253 (3%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ + + I PN + PR F + ++ L Q+++ G++QP+IV D G Y+IIA
Sbjct: 12 PQNKQVQDLPVAEIHPNRYQPRRTFSDDSIQQLAQTLQEEGLLQPIIV-RQDQGGYEIIA 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRAAK ++P I+ N+D++ + +A++EN+QR++LNP++EA YEQL+
Sbjct: 71 GERRFRAAKSLGWEKIPAIVNNLDDQQTASLALIENLQRENLNPIDEAQAYEQLMQLNDL 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQV 211
TQ + +GKS+S+VAN LR+LKL V+E + K +S H R + +S D + LA+
Sbjct: 131 TQTQLAQDIGKSQSYVANKLRLLKLAEPVQEYLAKGGLSARHGRAILGLSEEDQVKLAEE 190
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE----KYLTDLEKKISSKVGLNISI 267
IV K +SV++TEE + N K KK ++ K++ + G+ + +
Sbjct: 191 IVEKGLSVKETEERAAKLANPKPAVKKKAVVRYGRDMQLQINTIKQAVKLAKESGVKVKV 250
Query: 268 KHRN--NKGQFCI 278
++ Q I
Sbjct: 251 TEAKSPDEYQITI 263
>gi|313124634|ref|YP_004034893.1| effector of nucleoid occlusion noc [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|312281197|gb|ADQ61916.1| Effector of nucleoid occlusion Noc [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
Length = 274
Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 86/253 (33%), Positives = 142/253 (56%), Gaps = 9/253 (3%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ + + I PN + PR F + ++ L Q+++ G++QP+IV D G Y+IIA
Sbjct: 12 PQNKQVQDLPLAEIHPNRYQPRRTFSDDSIQQLAQTLQEEGLLQPIIV-RQDQGGYEIIA 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRAAK ++P I+ N+D++ + +A++EN+QR++LNP++EA YEQL+
Sbjct: 71 GERRFRAAKSLGWEKIPAIVNNLDDQQTASLALIENLQRENLNPIDEAQAYEQLMQLNDL 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQV 211
TQ + +GKS+S+VAN LR+LKL V+E + K +S H R + +S D + LA+
Sbjct: 131 TQTQLAQDIGKSQSYVANKLRLLKLAEPVQEYLAKGGLSARHGRAILGLSEEDQVKLAEE 190
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE----KYLTDLEKKISSKVGLNISI 267
IV K +SV++TEE + N K KK ++ K++ + G+ + +
Sbjct: 191 IVEKGLSVKETEERAAKLANPKPAVKKKAVVRYGRDMQLQINTIKQAVKLAKESGVKVKV 250
Query: 268 KHRN--NKGQFCI 278
++ Q I
Sbjct: 251 TEAKSPDEYQITI 263
>gi|300812311|ref|ZP_07092747.1| putative Nucleoid occlusion protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|300496731|gb|EFK31817.1| putative Nucleoid occlusion protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
Length = 274
Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 85/253 (33%), Positives = 141/253 (55%), Gaps = 9/253 (3%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ + + I PN + PR F + ++ L Q+++ G++QP+IV D G Y+IIA
Sbjct: 12 PQNKQVQDLPLAEIHPNRYQPRRTFSDDSIQQLAQTLQEEGLLQPIIV-RQDQGGYEIIA 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRAAK ++P I+ N+D++ + +A++EN+QR++LNP++EA YEQL+
Sbjct: 71 GERRFRAAKSLGWEKIPAIVNNLDDQQTASLALIENLQRENLNPIDEAQAYEQLMQLNDL 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQV 211
TQ + +GKS+S+VAN LR+LKL V+E + K +S H R + +S + LA+
Sbjct: 131 TQTQLAQDIGKSQSYVANKLRLLKLAEPVQEYLAKGGLSARHGRAILGLSEEGQVKLAEE 190
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE----KYLTDLEKKISSKVGLNISI 267
IV K +SV++TEE + N K KK ++ K++ + G+ + +
Sbjct: 191 IVEKGLSVKETEERAAKLANPKPAVKKKAVVRYGRDMQLQINTIKQAVKLAKESGVKVKV 250
Query: 268 KHRN--NKGQFCI 278
++ Q I
Sbjct: 251 TEAKSPDEYQITI 263
>gi|15616621|ref|NP_244927.1| DNA-binding protein Spo0J-like-like protein [Bacillus halodurans
C-125]
gi|81785273|sp|Q9K5M9|NOC_BACHD RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|10176684|dbj|BAB07778.1| DNA-binding protein Spo0J-like homolog [Bacillus halodurans C-125]
Length = 283
Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 128/223 (57%), Gaps = 4/223 (1%)
Query: 26 DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID 85
++ E + I IVPN PR F+ E +E+L Q+I++HGIIQP++VR +
Sbjct: 14 KQDQEMETGKQEEVHQLPIKEIVPNRFQPRTIFDDERIEELAQTIRTHGIIQPIVVRQRE 73
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
Y+IIAGERRFRA + +P II+ ++ + +A++EN+QR+ L +EEA+ Y+
Sbjct: 74 GK-YEIIAGERRFRAVTLLGWETIPAIIKEFNDSQTASVALIENLQREGLTAVEEAVAYQ 132
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVST 202
+LI +G TQ + +GK +S +AN LR+L L V++ I + +IS HAR +L
Sbjct: 133 KLIELHGLTQESLAQRLGKGQSTIANKLRLLHLSEPVQQAIMERKISERHARALLSLKDD 192
Query: 203 SDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ L + IV + ++V+ TEE V+E K + +R+
Sbjct: 193 ALETKLLEEIVEQHLNVKQTEERVKELLEDAPASKPKKKPTRK 235
>gi|172059046|ref|YP_001815506.1| parB-like partition protein [Exiguobacterium sibiricum 255-15]
gi|171991567|gb|ACB62489.1| parB-like partition protein [Exiguobacterium sibiricum 255-15]
Length = 278
Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 80/271 (29%), Positives = 147/271 (54%), Gaps = 19/271 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M N +K LG+G P ++ + + +V N PR F++
Sbjct: 1 MKNAIAKL-LGKG------------GQPVSLELDPQDTVRELKLTELVANRFQPRTVFDA 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E + +L +I+ HG++QP++VR G Y+IIAGERRFRA + +P II+ + +++
Sbjct: 48 ERITELATTIEEHGLLQPIVVRKQGEG-YEIIAGERRFRAVQSLGWETIPAIIKKMTDET 106
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L P+EEA Y +L++ TQ + +G+S+S +AN LR+L+LP
Sbjct: 107 TAALALIENLQREELTPIEEAEAYARLLAMQEITQEVLARRLGRSQSTIANKLRLLRLPE 166
Query: 181 SVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+VRE +++ +I+ HAR L + L + I+ ++ +V++TE+ V+ K +K
Sbjct: 167 TVREALKQRKITERHARALLPLKAADLQLQVLVEIIEREWNVKETEQRVERLLTPKVPKK 226
Query: 238 KIFEGSREKEKYLTDLEK--KISSKVGLNIS 266
+ +R+ L + + + GL +
Sbjct: 227 RHKSFARDTRIALNTIRDSVDMIERTGLTVE 257
>gi|104774704|ref|YP_619684.1| chromosome partitioning protein ParB [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|103423785|emb|CAI98793.1| Chromosome partitioning protein ParB [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|325684927|gb|EGD27071.1| chromosome partitioning protein SpoOJ [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 274
Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 86/253 (33%), Positives = 142/253 (56%), Gaps = 9/253 (3%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ + + I PN + PR F + ++ L Q+++ G++QP+IV D G Y+IIA
Sbjct: 12 PQNKQVQDLPLAEIHPNRYQPRRTFSDDSIQQLAQTLQEEGLLQPIIV-RQDQGGYEIIA 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRAAK ++P I+ N+D++ + +A++EN+QR++LNP++EA YEQL+
Sbjct: 71 GERRFRAAKSLGWEKIPAIVNNLDDQQTASLALIENLQRENLNPIDEAQAYEQLMQLNDL 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQV 211
TQ + +GKS+S+VAN LR+LKL V+E + K +S H R + +S D + LA+
Sbjct: 131 TQTQLAQDIGKSQSYVANKLRLLKLAEPVQEYLAKGGLSARHGRAILGLSEEDQVKLAEE 190
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE----KYLTDLEKKISSKVGLNISI 267
IV K +SV++TEE + N K KK ++ K++ + G+ + +
Sbjct: 191 IVEKGLSVKETEERAAKLANPKPAVKKKAVVRYGRDMQLQINTIKQAVKLAKESGVKVKV 250
Query: 268 KHRN--NKGQFCI 278
++ Q I
Sbjct: 251 TEAKSPDEYQITI 263
>gi|310830134|ref|YP_003962491.1| parB-like partition protein [Eubacterium limosum KIST612]
gi|308741868|gb|ADO39528.1| parB-like partition protein [Eubacterium limosum KIST612]
Length = 269
Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 129/221 (58%), Gaps = 3/221 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
I + I + I+PNP+ PR +FE + +L +SIKS GIIQP+ VR I Y++++G
Sbjct: 5 IESIVEQIPVDKILPNPNQPRKHFEDSAITELAESIKSFGIIQPIQVRKISEEFYELVSG 64
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR RA+K+A +P II + ++ S IAI+ENVQR+DL EEA Y QL+ Y T
Sbjct: 65 ERRLRASKVAGKETIPAIIVEMSDQDSALIAIMENVQREDLTYFEEAESYRQLMEYYNLT 124
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQV 211
Q+ I ++GKS+S VAN +R+LKL S+ E + + ++ HAR + T + +
Sbjct: 125 QDRIAELLGKSQSFVANKIRLLKLDPSIIETLTENNLTERHARALLRIPDTELQEEVLKQ 184
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+V K M+V+ TEELV++ + + EK+ +
Sbjct: 185 VVKKDMTVKKTEELVEKIRKDVLTNNYDEKLTPEKKARVKS 225
>gi|332983451|ref|YP_004464892.1| parB-like partition protein [Mahella australiensis 50-1 BON]
gi|332701129|gb|AEE98070.1| parB-like partition protein [Mahella australiensis 50-1 BON]
Length = 284
Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 77/205 (37%), Positives = 127/205 (61%), Gaps = 3/205 (1%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
I I +I PNP+ PR F+ L++L QSIK +G++QP+ VR + Y++IAGERR
Sbjct: 24 ILKIPIDAIRPNPYQPRKEFDMASLDELAQSIKQYGLLQPITVRRMGTSSYELIAGERRL 83
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA KM +L+E+P I+ + + S +A++EN+QR++LN +EEA GY L+ ++ TQ ++
Sbjct: 84 RACKMINLTEIPAIVLDALEEDSAMLAMIENLQRENLNFIEEAEGYYSLLKDHNMTQEEL 143
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSK 215
+ +GK++S +AN LR+LKLP V+ MI + ++ HAR L + + ++ K
Sbjct: 144 AARIGKNQSTIANKLRLLKLPVEVKRMIVENNLTERHARALLRLPDPDLQIDALKQVIDK 203
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIF 240
++V+ TEELV +K + +
Sbjct: 204 GLNVKKTEELVDRMVDKLCQPQPQN 228
>gi|76789428|ref|YP_328514.1| hypothetical protein CTA_0749 [Chlamydia trachomatis A/HAR-13]
gi|237803118|ref|YP_002888312.1| putative chromosome partitioning protein [Chlamydia trachomatis
B/Jali20/OT]
gi|237805039|ref|YP_002889193.1| putative chromosome partitioning protein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|76167958|gb|AAX50966.1| ParB [Chlamydia trachomatis A/HAR-13]
gi|158562063|gb|ABA42606.2| chromosome partitioning protein [Chlamydia trachomatis]
gi|158562065|gb|ABA42609.2| chromosome partitioning protein [Chlamydia trachomatis]
gi|158562067|gb|ABA42612.2| chromosome partitioning protein [Chlamydia trachomatis]
gi|158562069|gb|ABA42615.2| chromosome partitioning protein [Chlamydia trachomatis]
gi|231273339|emb|CAX10254.1| putative chromosome partitioning protein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274352|emb|CAX11147.1| putative chromosome partitioning protein [Chlamydia trachomatis
B/Jali20/OT]
Length = 281
Score = 77.4 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 11/256 (4%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLY 89
++ ++I I +P PR F E L++L SIK+ G+I P +VR Y
Sbjct: 5 PSEDTLLEVNIEDIRVSPFQPRRTFLEEDLKELVLSIKTVGLIHPPVVREIRNGDKVLYY 64
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
++IAGERR+RA ++A VPV+++ V + + E ++EN+QR +LNPLE A + +LI
Sbjct: 65 ELIAGERRWRALQLAGYKTVPVVLKQVLADDMAAEATLIENIQRVNLNPLEMAEAFRRLI 124
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDP 205
+G TQ+ + VGK RS VAN LR+ LP V+E + EISLGHA+ ++ +
Sbjct: 125 VVFGLTQDKVAKKVGKKRSTVANYLRLFSLPQEVQEKMNSGEISLGHAKVILSLEDENLR 184
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
L+Q I+S K++VR+ E + K K S+ + L ++++++ G +
Sbjct: 185 QILSQKIISCKLAVREAEMEAKRLVKGKGASLKEASSSQPSSR-LGFCQERLATTFGYPV 243
Query: 266 SIKHRNNKGQFCIKYE 281
++K + + C+ +
Sbjct: 244 TVKPQGR--RICVSFF 257
>gi|332800539|ref|YP_004462038.1| parB-like partition protein [Tepidanaerobacter sp. Re1]
gi|332698274|gb|AEE92731.1| parB-like partition protein [Tepidanaerobacter sp. Re1]
Length = 267
Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 129/209 (61%), Gaps = 3/209 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
S I + I PN + PR F E L++L SIKS+G++QP++VR G Y+IIAGERR
Sbjct: 10 SVVNIPLEEIQPNIYQPRKDFNDESLDELTNSIKSYGVLQPIVVRRNSRGGYEIIAGERR 69
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
+RA K A L E+P II++ + + +A++EN+QR+DLN LEEA GY QLI E G TQ
Sbjct: 70 WRACKKAGLKEIPAIIKDAKDADTAILALMENIQREDLNFLEEAEGYRQLIQECGVTQEQ 129
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVS 214
+ +GKS+S +AN +RILKL + +I +E+++ HAR L + + +VS
Sbjct: 130 LAMKLGKSQSTIANKMRILKLSPEIINIISQEKLTERHARSLLKLPDKELQMQVLNQVVS 189
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ +SVR TEEL+++ K KK S
Sbjct: 190 RGLSVRQTEELIEQTIEKINDDKKNKSKS 218
>gi|165978536|gb|ABY76715.1| ParB [Chlamydia trachomatis]
gi|165978548|gb|ABY76725.1| ParB [Chlamydia trachomatis]
Length = 281
Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 11/256 (4%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLY 89
++ ++I I +P PR F E L++L SIK+ G+I P +VR Y
Sbjct: 5 PSEDTLLEVNIEDIRVSPFQPRRTFLEEDLKELVLSIKTVGLIHPPVVREIRNGDKVLYY 64
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
++IAGERR+RA ++A VPV+++ V + + E ++EN+QR +LNPLE A + +LI
Sbjct: 65 ELIAGERRWRALQLAGYKTVPVVLKQVLADDMAAEATLIENIQRVNLNPLEMAEAFRRLI 124
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDP 205
+G TQ+ + VGK RS VAN LR+ LP V+E + EISLGHA+ ++ +
Sbjct: 125 VVFGLTQDKVAKKVGKKRSTVANYLRLFSLPQEVQEKMNSGEISLGHAKVILSLEDENLR 184
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
L+Q I+S K++VR+ E + K K + S + L ++++++ G +
Sbjct: 185 QILSQKIISCKLAVREAEMEAKRLVKGKGASLK-EDSSSQPSSRLGFCQERLATTFGYPV 243
Query: 266 SIKHRNNKGQFCIKYE 281
++K + + C+ +
Sbjct: 244 TVKPQGR--RICVSFF 257
>gi|15605421|ref|NP_220207.1| chromosome partitioning protein [Chlamydia trachomatis D/UW-3/CX]
gi|166154030|ref|YP_001654148.1| putative chromosome partitioning protein [Chlamydia trachomatis
434/Bu]
gi|166154905|ref|YP_001653160.1| putative chromosome partitioning protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|255311517|ref|ZP_05354087.1| putative chromosome partitioning protein [Chlamydia trachomatis
6276]
gi|255317818|ref|ZP_05359064.1| putative chromosome partitioning protein [Chlamydia trachomatis
6276s]
gi|301335231|ref|ZP_07223475.1| putative chromosome partitioning protein [Chlamydia trachomatis
L2tet1]
gi|12230424|sp|O84694|PARB_CHLTR RecName: Full=Probable chromosome-partitioning protein parB
gi|3329141|gb|AAC68283.1| Chromosome Partitioning Protein [Chlamydia trachomatis D/UW-3/CX]
gi|165930018|emb|CAP03501.1| putative chromosome partitioning protein [Chlamydia trachomatis
434/Bu]
gi|165930893|emb|CAP06455.1| putative chromosome partitioning protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|165978500|gb|ABY76685.1| ParB [Chlamydia trachomatis]
gi|165978506|gb|ABY76690.1| ParB [Chlamydia trachomatis]
gi|165978512|gb|ABY76695.1| ParB [Chlamydia trachomatis]
gi|165978518|gb|ABY76700.1| ParB [Chlamydia trachomatis]
gi|165978524|gb|ABY76705.1| ParB [Chlamydia trachomatis]
gi|165978542|gb|ABY76720.1| ParB [Chlamydia trachomatis]
gi|165978552|gb|ABY76728.1| ParB [Chlamydia trachomatis]
gi|165978554|gb|ABY76729.1| ParB [Chlamydia trachomatis]
gi|296436232|gb|ADH18406.1| putative chromosome partitioning protein [Chlamydia trachomatis
G/9768]
gi|296437161|gb|ADH19331.1| putative chromosome partitioning protein [Chlamydia trachomatis
G/11222]
gi|296438092|gb|ADH20253.1| putative chromosome partitioning protein [Chlamydia trachomatis
G/11074]
gi|297140593|gb|ADH97351.1| putative chromosome partitioning protein [Chlamydia trachomatis
G/9301]
gi|297748819|gb|ADI51365.1| ParB [Chlamydia trachomatis D-EC]
gi|297749699|gb|ADI52377.1| ParB [Chlamydia trachomatis D-LC]
Length = 281
Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 11/256 (4%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLY 89
++ ++I I +P PR F E L++L SIK+ G+I P +VR Y
Sbjct: 5 PSEDTLLEVNIEDIRVSPFQPRRTFLEEDLKELVLSIKTVGLIHPPVVREIRNGDKVLYY 64
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
++IAGERR+RA ++A VPV+++ V + + E ++EN+QR +LNPLE A + +LI
Sbjct: 65 ELIAGERRWRALQLAGYKTVPVVLKQVLADDMAAEATLIENIQRVNLNPLEMAEAFRRLI 124
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDP 205
+G TQ+ + VGK RS VAN LR+ LP V+E + EISLGHA+ ++ +
Sbjct: 125 VVFGLTQDKVAKKVGKKRSTVANYLRLFSLPQEVQEKMNSGEISLGHAKVILSLEDENLR 184
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
L+Q I+S K++VR+ E + K K + S + L ++++++ G +
Sbjct: 185 QILSQKIISCKLAVREAEMEAKRLVKGKGASLK-EDSSSQPSSRLGFCQERLATTFGYPV 243
Query: 266 SIKHRNNKGQFCIKYE 281
++K + + C+ +
Sbjct: 244 TVKPQGR--RICVSFF 257
>gi|229007795|ref|ZP_04165381.1| Nucleoid occlusion protein [Bacillus mycoides Rock1-4]
gi|228753472|gb|EEM02924.1| Nucleoid occlusion protein [Bacillus mycoides Rock1-4]
Length = 216
Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 68/183 (37%), Positives = 117/183 (63%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + I E I I +I+PN + PR F++ +++L +I++HG+IQP
Sbjct: 16 SEFELQNESHEEIDKKIHEEIQEIPIANIIPNRYQPRTVFDAARIDELALTIRTHGLIQP 75
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R + Y+IIAGERRFRAA +VP II+N+++ + +A++EN+QR++L +
Sbjct: 76 IVIRKYEEDKYEIIAGERRFRAATKLGWEKVPAIIKNLNDTETASVALIENLQREELTAI 135
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA+ Y++LI + TQ + +GK +S +AN LR+LKLP ++ + ++ I+ HAR
Sbjct: 136 EEAVAYQKLIELHNLTQEALAQRLGKGQSTIANKLRLLKLPEEIKRALLEKSITERHARA 195
Query: 199 LVS 201
L+
Sbjct: 196 LIP 198
>gi|312866823|ref|ZP_07727036.1| ParB-like protein [Streptococcus parasanguinis F0405]
gi|311097606|gb|EFQ55837.1| ParB-like protein [Streptococcus parasanguinis F0405]
Length = 222
Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 134/228 (58%), Gaps = 7/228 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + I++ I NP PR F+ E LE+L QSIK +G+IQP+IVR ++++AGER
Sbjct: 2 EKLEKIAVKDIRTNPFQPRKVFDQEKLEELAQSIKENGLIQPIIVRKSPIIGFELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRA+K+A L VP II+ + ++ + AI+EN+QR+DLNP+EEA+ Y++L ++GY +
Sbjct: 62 RFRASKIAGLELVPAIIKELTDQEMMRQAIIENLQREDLNPIEEAISYQKL-VDHGYKHD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
I +GKSR +++N+LR+L L SV+E + + +IS HAR LV + +
Sbjct: 121 QIAQFMGKSRPYISNMLRLLHLAPSVQEAVIQNDISSAHARVLVPLDEEEQRFWLERI-- 178
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
++L K K+ + + KE +L + E+++ +
Sbjct: 179 ----KQDQLNVRTLENKISSKRKQKNKKIKESFLLEEEQRLKKYLEQK 222
>gi|242372608|ref|ZP_04818182.1| stage 0 DNA-binding protein [Staphylococcus epidermidis M23864:W1]
gi|242349663|gb|EES41264.1| stage 0 DNA-binding protein [Staphylococcus epidermidis M23864:W1]
Length = 281
Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 85/274 (31%), Positives = 163/274 (59%), Gaps = 14/274 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E + + I I IVPN + PR FE
Sbjct: 3 MKKPFSK---------LFG-LKNKDDIVGYTEEERNNNVESIHIERIVPNRYQPRQVFEP 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+++L +SI+ HG++QP++VR I+ +++IIAGERRFRA + + VIIR+++++
Sbjct: 53 NKIKELAESIEEHGLLQPIVVRPIEEDMFEIIAGERRFRALQSLHKPQAEVIIRHMNDEE 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ +GKS+S +AN LR+LKL
Sbjct: 113 TAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAP 172
Query: 181 SVREMIRKEEISLGHART--LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+V + +R+ +I+ HAR ++S + L + ++++K++V+ TE+ V+++ ++ + +
Sbjct: 173 NVIKRLREGKITERHARAVLVLSEEEQEDLIEQVINQKLNVKQTEDKVRQKTGPEKVKAQ 232
Query: 239 IFEGSREKEKYLTDLEKKIS--SKVGLNISIKHR 270
F+ S++ + ++ K I + GL + K +
Sbjct: 233 TFQFSQDVTQARDEVGKSIQAIEQSGLRVEHKDK 266
>gi|158562071|gb|ABA42618.2| chromosome partitioning protein [Chlamydia trachomatis]
Length = 281
Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 11/256 (4%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLY 89
++ ++I I +P PR F E L++L SIK+ G+I P +VR Y
Sbjct: 5 PSEDTLLEVNIEDIRVSPFQPRRTFLEEDLKELVLSIKAVGLIHPPVVREIRNGDKVLYY 64
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
++IAGERR+RA ++A VPV+++ V + + E ++EN+QR +LNPLE A + +LI
Sbjct: 65 ELIAGERRWRALQLAGYKTVPVVLKQVLADDMAAEATLIENIQRVNLNPLEMAEAFRRLI 124
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDP 205
+G TQ+ + VGK RS VAN LR+ LP V+E + EISLGHA+ ++ +
Sbjct: 125 VVFGLTQDKVAKKVGKKRSTVANYLRLFSLPQEVQEKMNSGEISLGHAKVILSLEDENLR 184
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
L+Q I+S K++VR+ E + K K S+ + L ++++++ G +
Sbjct: 185 QILSQKIISCKLAVREAEMEAKRLVKGKGASLKEASSSQPSSR-LGFCQERLATTFGYPV 243
Query: 266 SIKHRNNKGQFCIKYE 281
++K + + C+ +
Sbjct: 244 TVKPQGR--RICVSFF 257
>gi|157694472|ref|YP_001488934.1| stage 0 DNA-binding protein [Bacillus pumilus SAFR-032]
gi|205829232|sp|A8FJF7|NOC_BACP2 RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|157683230|gb|ABV64374.1| stage 0 DNA-binding protein [Bacillus pumilus SAFR-032]
Length = 291
Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 78/249 (31%), Positives = 140/249 (56%), Gaps = 5/249 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E I++ + +T+ E + + +I+PN PR F E + +L +I +HGIIQP
Sbjct: 17 PERETEIEAEIAEHDTLKEEIQELPVDTIMPNRFQPRTIFSEEKIHELATTIHTHGIIQP 76
Query: 79 LIVRAIDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
++VR + Y++IAGERR+RA + ++P II++ + + +A++EN+QR++L+
Sbjct: 77 IVVRPTEEEGKYELIAGERRWRAVQTLQWEKIPAIIKDFTDTETASVALIENLQREELSA 136
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EEA Y +L+ + TQ + +GK +S VAN LR+LKLP V++ I +++IS HAR
Sbjct: 137 IEEAHAYARLLELHDLTQEALAQRLGKGQSTVANKLRLLKLPEEVQQAILEKKISERHAR 196
Query: 198 TLVS---TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
+LV ++L Q I+ K+++V+ TEE V + ++ +K + +
Sbjct: 197 SLVPLKLPELQIALLQEIIEKQLNVKQTEERVVKMLE-QKTDRKPRPKRKAFSRDTRIAM 255
Query: 255 KKISSKVGL 263
I + +
Sbjct: 256 NTIRQSLHM 264
>gi|116514832|ref|YP_813738.1| Spo0J-like protein [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116094147|gb|ABJ59300.1| Effector of nucleoid occlusion Noc [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
Length = 274
Score = 77.0 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 86/253 (33%), Positives = 141/253 (55%), Gaps = 9/253 (3%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ + + I PN + PR F + + L Q+++ G++QP+IV D G Y+IIA
Sbjct: 12 PQNKQVQDLPVAEIHPNRYQPRRTFSDDSIRQLAQTLQEEGLLQPIIV-RQDQGGYEIIA 70
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERRFRAAK ++P I+ N+D++ + +A++EN+QR++LNP++EA YEQL+
Sbjct: 71 GERRFRAAKSLGWEKIPAIVNNLDDQQTASLALIENLQRENLNPIDEAQAYEQLMQLNDL 130
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQV 211
TQ + +GKS+S+VAN LR+LKL V+E + K +S H R + +S D + LA+
Sbjct: 131 TQTQLAQDIGKSQSYVANKLRLLKLAEPVQEYLAKGGLSASHGRAILGLSEEDQVKLAEE 190
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE----KYLTDLEKKISSKVGLNISI 267
IV K +SV++TEE + N K KK ++ K++ + G+ + +
Sbjct: 191 IVEKGLSVKETEERAAKLANPKPAVKKKAVVRYGRDMQLQINTIKQAVKLAKESGVKVKV 250
Query: 268 KHRN--NKGQFCI 278
++ Q I
Sbjct: 251 TEAKSPDEYQITI 263
>gi|295693714|ref|YP_003602324.1| chromosome partitioning protein [Lactobacillus crispatus ST1]
gi|295031820|emb|CBL51299.1| Chromosome partitioning protein [Lactobacillus crispatus ST1]
Length = 278
Score = 76.6 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 76/259 (29%), Positives = 145/259 (55%), Gaps = 15/259 (5%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAG 94
+ + + IVPN + PR F + +++L +++ G++QP++VR D+ Y+IIAG
Sbjct: 16 NKQVQDLELSKIVPNRYQPRREFSDDSIKELAETLDKDGLLQPIVVREDGDDEQYEIIAG 75
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR+RAAK +P I++N+ + + +A++EN+QR+DLNP++EA Y L+ T
Sbjct: 76 ERRYRAAKSLGWQTIPAIVKNMSDDQAASLALIENLQREDLNPIDEAKAYTNLMELNDLT 135
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVI 212
Q + +GKS+S+VAN LR+LKL +V++ + +I+ H R ++ S +D + I
Sbjct: 136 QTALAKNMGKSQSYVANKLRLLKLDDNVQQALIAGKITARHGRAMIGLSNADQDRVLTEI 195
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKK--------IFEGSREKEKYLTDLEK--KISSKVG 262
+K ++V+ TEE+VQ+ D + K + ++ + + ++K K++ G
Sbjct: 196 EAKGLNVKQTEEIVQDVDAYFNPKPKAKKEAKRVVSRVPKDLKVQINTIKKAVKLAEDSG 255
Query: 263 LNISIKHRN--NKGQFCIK 279
+ + + + + I+
Sbjct: 256 IKVKVTENKDPDDYKITIE 274
>gi|256849429|ref|ZP_05554861.1| chromosome partitioning protein [Lactobacillus crispatus MV-1A-US]
gi|262046096|ref|ZP_06019059.1| chromosome partitioning protein [Lactobacillus crispatus MV-3A-US]
gi|312976918|ref|ZP_07788667.1| conserved hypothetical protein [Lactobacillus crispatus CTV-05]
gi|256713545|gb|EEU28534.1| chromosome partitioning protein [Lactobacillus crispatus MV-1A-US]
gi|260573426|gb|EEX29983.1| chromosome partitioning protein [Lactobacillus crispatus MV-3A-US]
gi|310896246|gb|EFQ45311.1| conserved hypothetical protein [Lactobacillus crispatus CTV-05]
Length = 278
Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 75/259 (28%), Positives = 145/259 (55%), Gaps = 15/259 (5%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAG 94
+ + + IVPN + PR F + +++L +++ G++QP++VR D+ Y+IIAG
Sbjct: 16 NKQVQDLELSKIVPNRYQPRREFSDDSIKELAETLDKDGLLQPIVVREDGDDEQYEIIAG 75
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR+RAAK +P I++N+ + + +A++EN+QR+DLNP++EA Y L+ T
Sbjct: 76 ERRYRAAKSLGWQTIPAIVKNMSDDQAASLALIENLQREDLNPIDEAKAYTNLMELNDLT 135
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVI 212
Q + +GKS+S+VAN LR+LKL +V++ + +I+ H R ++ S +D + I
Sbjct: 136 QTALAKNMGKSQSYVANKLRLLKLDDNVQQALIAGKITARHGRAMIGLSNADQDRVLTEI 195
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKK--------IFEGSREKEKYLTDLEK--KISSKVG 262
+K ++V+ TEE+V++ D + K + ++ + + ++K K++ G
Sbjct: 196 EAKGLNVKQTEEIVKDVDAYFNPKPKAKKEAKRVVSRVPKDLKVQINTIKKAVKLAEDSG 255
Query: 263 LNISIKHRN--NKGQFCIK 279
+ + + + + I+
Sbjct: 256 IKVKVTENKDPDDYKITIE 274
>gi|289551828|ref|YP_003472732.1| Chromosome (plasmid) partitioning protein ParB [Staphylococcus
lugdunensis HKU09-01]
gi|315660001|ref|ZP_07912859.1| stage 0 sporulation protein J [Staphylococcus lugdunensis M23590]
gi|289181359|gb|ADC88604.1| Chromosome (plasmid) partitioning protein ParB [Staphylococcus
lugdunensis HKU09-01]
gi|315494902|gb|EFU83239.1| stage 0 sporulation protein J [Staphylococcus lugdunensis M23590]
Length = 279
Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 85/274 (31%), Positives = 153/274 (55%), Gaps = 14/274 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E + + I I IVPN + PR F+
Sbjct: 1 MKKPFSK---------LFG-LKNKEDIVGYIEEDRNSNVESIQIERIVPNRYQPRQVFDP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L +SI HG++QP++VR I+ +Y+IIAGERRFRA + S VIIR++ ++
Sbjct: 51 SKLKELAESIDEHGLLQPIVVRPIEEHMYEIIAGERRFRALQSLQKSHADVIIRDMSDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSVVEEAEAYKKLLEIGNTTQSELAKSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V +R+ +I+ HAR ++ L + ++ +K++V+ TE V++Q ++ +
Sbjct: 171 KVIVRLREGKITERHARAVLPLSNEAQEQLIEQVIQQKLNVKQTEARVKQQVGPEKVTAQ 230
Query: 239 IFEGSREKEKYLTDLEKKIS--SKVGLNISIKHR 270
F+ S + + ++ K I + G+ + + +
Sbjct: 231 TFQFSHDLTQARDEVGKSIQAIEQSGIRVEHRDK 264
>gi|227879183|ref|ZP_03997055.1| stage 0 DNA-binding protein [Lactobacillus crispatus JV-V01]
gi|227861186|gb|EEJ68833.1| stage 0 DNA-binding protein [Lactobacillus crispatus JV-V01]
Length = 272
Score = 76.3 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 75/259 (28%), Positives = 145/259 (55%), Gaps = 15/259 (5%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAG 94
+ + + IVPN + PR F + +++L +++ G++QP++VR D+ Y+IIAG
Sbjct: 10 NKQVQDLELSKIVPNRYQPRREFSDDSIKELAETLDKDGLLQPIVVREDGDDEQYEIIAG 69
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR+RAAK +P I++N+ + + +A++EN+QR+DLNP++EA Y L+ T
Sbjct: 70 ERRYRAAKSLGWQTIPAIVKNMSDDQAASLALIENLQREDLNPIDEAKAYTNLMELNDLT 129
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVI 212
Q + +GKS+S+VAN LR+LKL +V++ + +I+ H R ++ S +D + I
Sbjct: 130 QTALAKNMGKSQSYVANKLRLLKLDDNVQQALIAGKITARHGRAMIGLSNADQDRVLTEI 189
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKK--------IFEGSREKEKYLTDLEK--KISSKVG 262
+K ++V+ TEE+V++ D + K + ++ + + ++K K++ G
Sbjct: 190 EAKGLNVKQTEEIVKDVDAYFNPKPKAKKEAKRVVSRVPKDLKVQINTIKKAVKLAEDSG 249
Query: 263 LNISIKHRN--NKGQFCIK 279
+ + + + + I+
Sbjct: 250 IKVKVTENKDPDDYKITIE 268
>gi|315925601|ref|ZP_07921811.1| chromosome partitioning protein SpoOJ [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621142|gb|EFV01113.1| chromosome partitioning protein SpoOJ [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 278
Score = 76.3 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 131/221 (59%), Gaps = 3/221 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
+ I + I+PNP+ PR F+ E L +L +SI++ G+IQP+ VR +DN LY++++G
Sbjct: 14 TQSAVILIPMEQIIPNPNQPRKTFKDESLTELAESIRTFGVIQPIQVRKVDNELYELVSG 73
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR RA+K+A + E+P + + +K S IAI+ENVQR+DL+ EEA Y QLI Y T
Sbjct: 74 ERRLRASKLAGMQEIPAMEVTISDKDSAVIAIIENVQREDLSFFEEAESYRQLIKYYDMT 133
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQV 211
Q + +++GKS+S VAN +R+LKL V + ++ ++S HAR + + + +
Sbjct: 134 QEQVAALIGKSQSFVANKIRLLKLDDQVIQAVKTNQLSERHARALLKIPDEAIQREVIEQ 193
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
I + ++V+ TE LV++ + + + K+ +
Sbjct: 194 IHKQDLNVKKTEALVEKVREEVMINNYDEKITPGKKARVKS 234
>gi|191637024|ref|YP_001986190.1| Chromosome partitioning protein, DNA-binding protein [Lactobacillus
casei BL23]
gi|190711326|emb|CAQ65332.1| Chromosome partitioning protein, DNA-binding protein [Lactobacillus
casei BL23]
gi|327381051|gb|AEA52527.1| ParB-like partition protein [Lactobacillus casei LC2W]
gi|327384226|gb|AEA55700.1| ParB-like partition protein [Lactobacillus casei BD-II]
Length = 276
Score = 75.9 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 12/234 (5%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+++ G ++ + + +IVPN PR F E + +L +IK H
Sbjct: 3 LSSIFGHKKPDDETV----------VQQLPMTAIVPNQFQPRKVFTPESIRELATTIKDH 52
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++QP+IVR Y+IIAGERR+RA + + P I++ +D+ S +A+VEN+QR+
Sbjct: 53 GLLQPIIVREYKPEKYEIIAGERRYRAMQTLGWEKAPAIVQKMDDDESASMALVENLQRE 112
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
L+ +EE Y L+ TQ + +GKS++ VAN +R+LKL V+E + K IS
Sbjct: 113 GLSAIEEGQAYVALMKLNHLTQAALAEQLGKSQAFVANKIRLLKLSEPVQEALMKSRISE 172
Query: 194 GHARTLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
H R L+ + + Q I + ++V++T L+ E K+ K R
Sbjct: 173 RHGRELLKLDEKQQVTALQQIFADDLTVKETSALINEMLRPKKPTPKPKPKVRR 226
>gi|289579525|ref|YP_003478152.1| parB-like partition protein [Thermoanaerobacter italicus Ab9]
gi|297545648|ref|YP_003677950.1| parB-like partition protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289529238|gb|ADD03590.1| parB-like partition protein [Thermoanaerobacter italicus Ab9]
gi|296843423|gb|ADH61939.1| parB-like partition protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 268
Score = 75.9 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 137/218 (62%), Gaps = 3/218 (1%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
+ + + I SI PNP+ PR F+ + L++L +SIK++G++QP+ VR + N Y++
Sbjct: 2 VSSKTQEICYLPIDSIRPNPYQPRKNFDIKNLQELAESIKAYGVLQPITVRMVHNNFYEL 61
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
+AGERR RA+K+A L+E+P II N ++ S +A++EN+QR++LN +EEA Y LI+++
Sbjct: 62 VAGERRLRASKLAGLAEIPAIIINAQDEDSAVLALIENLQRENLNFIEEAEAYYNLINDH 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSL 208
TQ + I+GKS+S +AN LRILKL ++E + + +++ HAR L
Sbjct: 122 HLTQEQLARILGKSQSTIANKLRILKLSKEIKEQLLENDLTERHARALLRLPDEELQRKA 181
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
++I+ KK++V TE+L+Q +K K + + +K
Sbjct: 182 LEIIIKKKLNVSQTEKLIQSMIDKITKPPEQVKKENKK 219
>gi|187935625|ref|YP_001887731.1| protein YyaA [Clostridium botulinum B str. Eklund 17B]
gi|187723778|gb|ACD24999.1| protein YyaA [Clostridium botulinum B str. Eklund 17B]
Length = 259
Score = 75.9 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 79/212 (37%), Positives = 122/212 (57%), Gaps = 1/212 (0%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
I I IVPN + PR YF E +E+L QSIK HGIIQP+ VR I + Y+++AGE
Sbjct: 2 NNEIINIDIEKIVPNLYQPRKYFNEEAIEELSQSIKQHGIIQPITVRKIGDT-YELVAGE 60
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK+A L VP I ++ + S EIA++EN+QR+DLN +EEA Y L++++ +TQ
Sbjct: 61 RRLRAAKVAELDVVPCNIVDITDSESAEIALLENLQREDLNYIEEAEAYSNLLNDHNFTQ 120
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
D+ +GK +S +AN LR+LKL VR+M + +++ H+R L+S + +V+
Sbjct: 121 EDLAKRIGKKQSTIANKLRLLKLDPKVRQMCLENKLTERHSRALLSLPNADLQLKVVSKV 180
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+ + + + + K +
Sbjct: 181 VNDGLNVKNTEELINKELLKLAGKQLNKKRTN 212
>gi|295103707|emb|CBL01251.1| ParB-like partition proteins [Faecalibacterium prausnitzii SL3/3]
Length = 264
Score = 75.9 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ + + I I P+P R F+ + L L QSI+ +G++Q + Y+
Sbjct: 3 ERKKTSGKLLSLPIDQIHPSPFQARKSFDEQELTALAQSIRENGLLQ-PVTVRRAAEGYE 61
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
++AGERR RA ++A ++ +P I+ + + + + ++EN+QR DLNP E+A G ++
Sbjct: 62 LVAGERRLRACQLAKMTTIPAILCSYADDRTAALGLLENIQRADLNPFEQAQGLRDVMVL 121
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSL 208
+ TQ + +G ++ AN LR+L+L + R+ + ++ HAR + + +
Sbjct: 122 WDCTQAEAAKRLGMAQPTFANKLRLLQLTADQRQFVLDNNLTERHARAVLRLPENRRSEA 181
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
I ++++ R T+ +++ N K R+ ++ +
Sbjct: 182 LITIAKRRLNARQTDSYIEQLLNSPPKAGHRISMVRDVRIFVNTI 226
>gi|70727672|ref|YP_254588.1| hypothetical protein SH2673 [Staphylococcus haemolyticus JCSC1435]
gi|68448398|dbj|BAE05982.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 279
Score = 75.9 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 78/247 (31%), Positives = 134/247 (54%), Gaps = 10/247 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E S + I I IVPN + PR F+S
Sbjct: 1 MKKPFSK---------LFG-LKNKDDIVGYIEEDRNSSVESIQIERIVPNRYQPRQVFDS 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +L +SI HG++QP++VR I+ +Y+IIAGERRFRA + S+ VIIR+++++
Sbjct: 51 SKITELAESIDEHGLLQPIVVRPIEENMYEIIAGERRFRALQSLHKSQADVIIRHMNDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ G TQ+++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSAVEEAEAYKKLLEIGGTTQSELAKSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V +R+ +I+ HAR ++S + + + + + + ++ K
Sbjct: 171 KVINRLREGKITERHARAVLSLKEDDQEKLIEQVISQKLNVKQTEARVKQKIGPEKVKAQ 230
Query: 241 EGSREKE 247
K+
Sbjct: 231 SFQFSKD 237
>gi|199597913|ref|ZP_03211338.1| Spo0J-like protein, ParB-like nuclease domain [Lactobacillus
rhamnosus HN001]
gi|229550863|ref|ZP_04439588.1| stage 0 DNA-binding protein [Lactobacillus rhamnosus LMS2-1]
gi|258507238|ref|YP_003169989.1| nucleoid occlusion protein [Lactobacillus rhamnosus GG]
gi|258538425|ref|YP_003172924.1| nucleoid occlusion protein [Lactobacillus rhamnosus Lc 705]
gi|199591170|gb|EDY99251.1| Spo0J-like protein, ParB-like nuclease domain [Lactobacillus
rhamnosus HN001]
gi|229315688|gb|EEN81661.1| stage 0 DNA-binding protein [Lactobacillus rhamnosus LMS2-1]
gi|257147165|emb|CAR86138.1| Nucleoid occlusion protein [Lactobacillus rhamnosus GG]
gi|257150101|emb|CAR89073.1| Nucleoid occlusion protein [Lactobacillus rhamnosus Lc 705]
gi|259648604|dbj|BAI40766.1| chromosome partitioning protein ParB [Lactobacillus rhamnosus GG]
Length = 275
Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 2/217 (0%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
K + + +IVPN PR F SE +++L +IK HG++QP+IVR Y+
Sbjct: 9 KKSDDETVVQQLPLKAIVPNQFQPRKVFTSESIQELAATIKEHGLLQPIIVREYAPDQYE 68
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
IIAGERR+RA ++ + P I++ +D+ S +A+VEN+QR+ L+ +EE Y L+
Sbjct: 69 IIAGERRYRAMQLLGWEKAPAIVQKMDDDESASMALVENLQREGLSAIEEGQAYVALMKL 128
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSL 208
TQ + +GKS++ VAN +R+LKL + V+E I +IS H R L + S+ +
Sbjct: 129 NHLTQGALAQQLGKSQAFVANKIRLLKLSAPVQEAIMNGQISERHGRELLKLDESEQVPA 188
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
Q + ++K++V++T LV E+ K+ K R
Sbjct: 189 LQQVFAEKLTVKETAALVNERLRPKKPTPKPKPKVRR 225
>gi|317123169|ref|YP_004103172.1| parB-like partition protein [Thermaerobacter marianensis DSM 12885]
gi|315593149|gb|ADU52445.1| parB-like partition protein [Thermaerobacter marianensis DSM 12885]
Length = 314
Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 66/163 (40%), Positives = 109/163 (66%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
I + I PNP PR +F+ L +L +SI+ G++QPL+VR +G Y+++AGERR+
Sbjct: 33 LQRIRLADIRPNPFQPRVHFDEASLAELAESIRQVGLLQPLLVRPAADGGYELVAGERRW 92
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RAA++A L EVP ++R + ++ + +A+VEN+QR++L EEA Y+ +I +G TQ +
Sbjct: 93 RAARLAGLEEVPAVVRPLPDQDAAVLALVENLQREELGFFEEAAAYQDVIHRFGLTQEQL 152
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+++G+ +S +AN LR+L+LP +VR+ I +S HAR L+
Sbjct: 153 AALLGRQQSTIANKLRLLRLPMNVRQQIVAAGLSERHARALLR 195
>gi|167751433|ref|ZP_02423560.1| hypothetical protein EUBSIR_02429 [Eubacterium siraeum DSM 15702]
gi|167655679|gb|EDR99808.1| hypothetical protein EUBSIR_02429 [Eubacterium siraeum DSM 15702]
Length = 264
Score = 75.9 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 139/270 (51%), Gaps = 20/270 (7%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K + I ++I I NP+ PR YF+ LE L SIK +G++QPL VR + Y
Sbjct: 5 TKDKKITGQVITVNIREIDLNPNQPRKYFDKAELESLAISIKENGLLQPLTVRKKSDDRY 64
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
++IAGERR RA + ++EV VII + + + S +AI+EN+QR DLN +EEA+ ++L++
Sbjct: 65 ELIAGERRLRACILVGINEVRVIIEDRNEEESSVLAIIENIQRCDLNCIEEAVAMQRLMN 124
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLS 207
YGYTQ ++ +GK++S +AN +R+LKL + + ++ R L+
Sbjct: 125 HYGYTQEELARKLGKAQSTIANKIRLLKLSDKLLAKALEYDLCERQIRALIRLPEEQREK 184
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
+ I ++V +TE+ + + KK K K K Y+ ++ + + +
Sbjct: 185 AEEHIYRYGLNVSETEKYIDKLLVKKRKADKPKWTFTAKRLYINNINRTLETM------- 237
Query: 268 KHRNNKGQFCIKYETN--EQ---LKIICSL 292
G I++ + E+ L+ I +
Sbjct: 238 ---KKSG---IEFISEKHEENGYLEYIIRI 261
>gi|42519770|ref|NP_965700.1| chromosome partitioning protein ParB [Lactobacillus johnsonii NCC
533]
gi|41584060|gb|AAS09666.1| probable chromosome partitioning protein ParB [Lactobacillus
johnsonii NCC 533]
gi|329668021|gb|AEB93969.1| putative chromosome partitioning protein ParB [Lactobacillus
johnsonii DPC 6026]
Length = 293
Score = 75.5 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 86/299 (28%), Positives = 157/299 (52%), Gaps = 28/299 (9%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
+L G + I + I + I+PN + PR+ F E +E+L ++K G+
Sbjct: 4 SLFGNRQKKIPESK--------QVQEIELDKIMPNRYQPRHTFSDESIEELATTLKEQGL 55
Query: 76 IQPLIVRAI---DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+QP+I+R G Y+IIAGERRFRAA+ +++P I+ ++D++ + +A+VEN+QR
Sbjct: 56 LQPIILRKPADGPEGEYEIIAGERRFRAAQSLKWAKIPAIVEDMDDEKAASLALVENLQR 115
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
++LNP++EA Y QL+ TQ ++ +GK++S++AN +R+LKL V+ + ++IS
Sbjct: 116 ENLNPIDEAQAYVQLMKVNNLTQTELAEQMGKTQSYIANKIRLLKLTPKVQGFLIDKKIS 175
Query: 193 LGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK----------EKRKKIF 240
H R L ++ D + I+ ++V++TEE+V++ D + K
Sbjct: 176 QRHGRALLALNEEDQDTAVSEIIKSGLTVKETEEMVKDLDGYFAAQEKEKEEALEENKPE 235
Query: 241 EGSREKEKYLTDLEKKISSKVGL-NISIKHRNNKGQFCIKYETN---EQLKIICSLLGE 295
+ + K+K ++ +IK + G +KY+ + + KI LL +
Sbjct: 236 QTKKPKKKVQVRTANDFKVQINTIKKAIKMAKDSG-MTVKYKEDKKGDSYKITIELLKK 293
>gi|330959565|gb|EGH59825.1| parB family partitioning protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 265
Score = 75.5 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 77/259 (29%), Positives = 128/259 (49%), Gaps = 11/259 (4%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH-GIIQPLIVRAIDNGLYKIIAGERRFRA 100
I + + P R +F E L+DL S+K+ + PLIV +G + IIAGERR+R+
Sbjct: 3 IEVGRLHPGVWQKRKFFNEESLDDLADSMKTTGTNVVPLIVSIRPDGDFSIIAGERRWRS 62
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
+ + + + + + I+ +EN+QR DLNP+EEA Y L ++ + D+
Sbjct: 63 GQRLGFATLKCEVGAYSYEQAAYISAIENLQRTDLNPIEEATSYHDLCTDLNLSHTDLAI 122
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIVSKKM 217
VGKSRSH++N +R+L L VR+ + +S GHAR L +D ++A+ V
Sbjct: 123 QVGKSRSHISNYVRLLDLDIRVRDALINSRLSYGHARPLCALKRKADQRNIAEKAVRFDW 182
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
SV+ ++ V +K K+ + + L LE+ IS GL+ +K G +
Sbjct: 183 SVQKIQQAVNALTQRKPSPVKL----SDTDPDLKRLERDISEVTGLDCVVKRTP-SGSWQ 237
Query: 278 IKYE--TNEQLKIICSLLG 294
+ + +E + LG
Sbjct: 238 LGFLAPESESFTGLLDRLG 256
>gi|295426137|ref|ZP_06818804.1| chromosome partitioning protein SpoOJ [Lactobacillus amylolyticus
DSM 11664]
gi|295064173|gb|EFG55114.1| chromosome partitioning protein SpoOJ [Lactobacillus amylolyticus
DSM 11664]
Length = 277
Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 79/259 (30%), Positives = 141/259 (54%), Gaps = 16/259 (6%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ I + I PN PR F E +++L Q++ G++QP++VR + G Y+IIAGE
Sbjct: 16 NKQIQDIELSKITPNKFQPRRQFSEESIKELAQTLDKEGLLQPIVVRENEYG-YEIIAGE 74
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RRFRAA+ ++P I+ N+++ + +A++EN+QR++LNP++EA Y+ L+ TQ
Sbjct: 75 RRFRAAQSLGWEKIPAIVNNMNDDQAASLALIENLQRENLNPIDEAKAYKNLMKLNNLTQ 134
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIV 213
+ +GKS+S+VAN LR+LKL V+ + EIS H R LV S D + I+
Sbjct: 135 TQLAKNMGKSQSYVANKLRLLKLTPKVQSYLASGEISARHGRVLVGLSERDQSRMVDEIL 194
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK-----------EKYLTDLEKKISSKVG 262
++V++TEE+ ++ D +K+ ++ R + + K++ G
Sbjct: 195 DNNLNVKETEEIAKDVDGYFKKKDQVKSEKRTRVARRMPKDLKVQINTIKQAVKLAKDSG 254
Query: 263 LNISIKHRN--NKGQFCIK 279
+ + ++ N + + I+
Sbjct: 255 IKVRVQENNDPDDYRITIE 273
>gi|304405897|ref|ZP_07387555.1| parB-like partition protein [Paenibacillus curdlanolyticus YK9]
gi|304345140|gb|EFM10976.1| parB-like partition protein [Paenibacillus curdlanolyticus YK9]
Length = 274
Score = 75.5 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 82/226 (36%), Positives = 131/226 (57%), Gaps = 5/226 (2%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+++ + I I I +P+ PR F+ E +++LCQ+IK+HG+IQP++VR NG
Sbjct: 13 DQRNNAESDEVKQIPISEIDTSPYQPRTVFDDERIDELCQTIKTHGVIQPIVVRLR-NGR 71
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERR+RA L +P I+R ++ + IA++EN+QR+ L LEEA+ Y++LI
Sbjct: 72 YEIIAGERRWRAVTKLGLERIPAIVREFNDSQAASIALIENLQREGLTALEEAVAYQKLI 131
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDP 205
+ TQ + +GKS+S +AN +R+L L S V++ + +I+ HAR L+ +
Sbjct: 132 DLHQLTQESLAQRLGKSQSTIANKIRLLGLSSPVKDALMARKITERHARALLSLDTEELQ 191
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ IVSK+++V+ TE V K KK S K+ L
Sbjct: 192 EKVLGDIVSKELNVKQTEARVAFYKE-ATKAKKARRVSFTKDVRLA 236
>gi|312879782|ref|ZP_07739582.1| parB-like partition protein [Aminomonas paucivorans DSM 12260]
gi|310783073|gb|EFQ23471.1| parB-like partition protein [Aminomonas paucivorans DSM 12260]
Length = 373
Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 126/230 (54%), Gaps = 6/230 (2%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
++ SPE E I + + PNP+ PR + + E + +L SI+ G++Q
Sbjct: 84 FPSPGENAGSPEPPRE---GRMKDIPVTRVRPNPYQPRIHMDEEEIRELADSIREVGVLQ 140
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PL+VR +++G Y+++AGERR RAAK A L VP ++ +VD S +A+VEN+QR++L+
Sbjct: 141 PLLVRPVEDG-YELVAGERRLRAAKEAGLETVPALVMDVDPFSQQLLALVENLQRRNLSS 199
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EE E LI+ G++Q ++ +G+S++ +AN +R+LKL V++++ + AR
Sbjct: 200 IEEGKCLEDLINRTGWSQTELARRLGRSQAALANKIRLLKLDDEVQQLVVAGRLGERQAR 259
Query: 198 TLVSTSDPLSL--AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
L+ + A + + ++VRD E LV+ + +
Sbjct: 260 ALLPLAPEQQRGLAYRAIEEDLNVRDLERLVEVDREDRPVSGRGRRAKPS 309
>gi|239637280|ref|ZP_04678267.1| protein YyaA [Staphylococcus warneri L37603]
gi|239597117|gb|EEQ79627.1| protein YyaA [Staphylococcus warneri L37603]
gi|330685276|gb|EGG96937.1| nucleoid occlusion protein [Staphylococcus epidermidis VCU121]
Length = 279
Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 83/247 (33%), Positives = 152/247 (61%), Gaps = 12/247 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E + + I I IVPN + PR FE
Sbjct: 1 MKKPFSK---------LFG-LKNKDDIMGSIEEDRNNNVESIHIERIVPNRYQPRQVFEP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +L +SIK HG++QP++VR I+ +++IIAGERRFRA + ++S+ VIIR++D++
Sbjct: 51 SKIHELAESIKEHGLLQPIVVRPIEEDMFEIIAGERRFRAMQSLNMSQADVIIRDMDDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSVVEEAEAYKKLLELGDVTQSELAKSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V +R+ +I+ HAR ++ S+ A + ++++K++V+ TE+ V+++ ++ + +
Sbjct: 171 KVITRLREGKITERHARAVLVLSEEDQEALIEQVIAQKLNVKQTEDKVRQKTGPEKIKAQ 230
Query: 239 IFEGSRE 245
F+ S++
Sbjct: 231 SFQFSQD 237
>gi|167038665|ref|YP_001666243.1| parB-like partition protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320117057|ref|YP_004187216.1| parB-like partition protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166857499|gb|ABY95907.1| parB-like partition protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319930148|gb|ADV80833.1| parB-like partition protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 268
Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 139/218 (63%), Gaps = 3/218 (1%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
+ + + I SI PNP+ PR F+ + L++L +SIK++G++QP+ VR + N Y++
Sbjct: 2 VSSKTQEICYLPIDSIRPNPYQPRKNFDIKNLQELAESIKAYGVLQPITVRMVYNNFYEL 61
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
+AGERR RA+K+A L+E+P II N ++ S +A++EN+QR++LN +EEA Y LI+++
Sbjct: 62 VAGERRLRASKLAGLAEIPAIIINAQDEDSAVLALIENLQRENLNFIEEAEAYYNLINDH 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSL 208
TQ + I+GKS+S +AN LRILKL ++E + + +++ HAR L
Sbjct: 122 HLTQEQLARILGKSQSTIANKLRILKLSKEIKEQLLENDLTERHARALLRLPDEELQKKA 181
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
++I+ KK++V TE+L+Q+ +K K+ + + +K
Sbjct: 182 LEIIIKKKLNVSQTEKLIQDMIDKITKQPEQVKKENKK 219
>gi|164686455|ref|ZP_02210483.1| hypothetical protein CLOBAR_00020 [Clostridium bartlettii DSM
16795]
gi|164604466|gb|EDQ97931.1| hypothetical protein CLOBAR_00020 [Clostridium bartlettii DSM
16795]
Length = 261
Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 74/209 (35%), Positives = 126/209 (60%), Gaps = 1/209 (0%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
I I IVPNP+ PR F + LE+L SI+S+G++Q I ++++AGERR
Sbjct: 6 VREIPIEEIVPNPYQPRKVFSEKSLEELKNSIESYGVLQ-PITVRKKGDKFELVAGERRL 64
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RAAK+A+L +P I+ ++ +++S +A++EN+QR+DLN +EEALGYE LI E+ +TQ +
Sbjct: 65 RAAKLANLKTIPAILHDMSDETSAVLALLENLQREDLNFIEEALGYENLIKEHNFTQQQL 124
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMS 218
+GK++S +AN LRILKLP S++E + + ++ HAR L+ + + +VI +
Sbjct: 125 AQKLGKNQSTIANKLRILKLPQSIKESLVENGLTERHARALLKLPNEELMDEVIQKVTKN 184
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGSREKE 247
++ + + E + +++
Sbjct: 185 ELTVKKTEKLIKDILESIELENNPEKKQN 213
>gi|256844008|ref|ZP_05549495.1| chromosome partitioning protein [Lactobacillus crispatus 125-2-CHN]
gi|293380691|ref|ZP_06626740.1| ParB-like partition protein [Lactobacillus crispatus 214-1]
gi|256613913|gb|EEU19115.1| chromosome partitioning protein [Lactobacillus crispatus 125-2-CHN]
gi|290922731|gb|EFD99684.1| ParB-like partition protein [Lactobacillus crispatus 214-1]
Length = 278
Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 74/259 (28%), Positives = 144/259 (55%), Gaps = 15/259 (5%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAG 94
+ + + I PN + PR F + +++L +++ G++QP++VR D+ Y+IIAG
Sbjct: 16 NKQVQDLELSKIFPNRYQPRREFSDDSIKELAETLDKDGLLQPIVVREDGDDEQYEIIAG 75
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
ERR+RAAK +P I++N+ + + +A++EN+QR+DLNP++EA Y L+ T
Sbjct: 76 ERRYRAAKSLGWQTIPAIVKNMSDDQAASLALIENLQREDLNPIDEAKAYTNLMELNDLT 135
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVI 212
Q + +GKS+S+VAN LR+LKL +V++ + +I+ H R ++ S +D + I
Sbjct: 136 QTALAKNMGKSQSYVANKLRLLKLDDNVQQALIAGKITARHGRAMIGLSNADQDRVLTEI 195
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKK--------IFEGSREKEKYLTDLEK--KISSKVG 262
+K ++V+ TEE+V++ D + K + ++ + + ++K K++ G
Sbjct: 196 EAKGLNVKQTEEIVKDVDAYFNPKPKAKKEAKRVVSRVPKDLKVQINTIKKAVKLAEDSG 255
Query: 263 LNISIKHRN--NKGQFCIK 279
+ + + + + I+
Sbjct: 256 IKVKVTENKDPDDYKITIE 274
>gi|312136217|ref|YP_004003555.1| parb-like partition protein [Caldicellulosiruptor owensensis OL]
gi|311776268|gb|ADQ05755.1| parB-like partition protein [Caldicellulosiruptor owensensis OL]
Length = 280
Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/170 (41%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ + I I+PNP+ PR+ F+ +E+L SIK++G++QP+IVR Y +IAGERR
Sbjct: 21 VEDVPIEKILPNPYQPRSNFDERLIEELAASIKTYGLLQPIIVRKKG-EFYYLIAGERRL 79
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA K + I+ NV + S +A++EN+QR+DL+ EEA GY+QL E+G TQ +I
Sbjct: 80 RACKHLGYDRIKAIVINVTDIESAILALIENIQRQDLDFFEEAQGYKQLSEEFGLTQVEI 139
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
+GK++S +AN +R+L+LP+ +R MIR+ +S HAR L+ +
Sbjct: 140 AKRIGKTQSAIANKIRLLQLPAEIRWMIREHGLSERHARALLRLRSEEDM 189
>gi|167041015|ref|YP_001664000.1| parB-like partition protein [Thermoanaerobacter sp. X514]
gi|256751464|ref|ZP_05492342.1| parB-like partition protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300913774|ref|ZP_07131091.1| parB-like partition protein [Thermoanaerobacter sp. X561]
gi|307725540|ref|YP_003905291.1| parB-like partition protein [Thermoanaerobacter sp. X513]
gi|166855255|gb|ABY93664.1| parB-like partition protein [Thermoanaerobacter sp. X514]
gi|256749683|gb|EEU62709.1| parB-like partition protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300890459|gb|EFK85604.1| parB-like partition protein [Thermoanaerobacter sp. X561]
gi|307582601|gb|ADN56000.1| parB-like partition protein [Thermoanaerobacter sp. X513]
Length = 268
Score = 74.7 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 140/218 (64%), Gaps = 3/218 (1%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
+ + + I SI PNP+ PR F+ + L++L +SIK++G++QP+ VR + N Y++
Sbjct: 2 VSSKTQEICYLPIDSIRPNPYQPRKNFDIKNLQELAESIKAYGVLQPITVRMVYNNFYEL 61
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
+AGERR RA+K+A L+E+P II N ++ S +A++EN+QR++LN +EEA Y LI+++
Sbjct: 62 VAGERRLRASKLAGLAEIPAIIINAQDEDSAVLALIENLQRENLNFIEEAEAYYNLINDH 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSL 208
TQ + I+GKS+S +AN LRILKL ++E + + +++ HAR L
Sbjct: 122 HLTQEQLARILGKSQSTIANKLRILKLSKEIKEQLLENDLTERHARALLRLPDEELQKKA 181
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
++I+ KK++V TE+L+Q+ +K K+++ + +K
Sbjct: 182 LEIIIKKKLNVSQTEKLIQDMIDKITKQQEQVKKENKK 219
>gi|311032247|ref|ZP_07710337.1| parB-like partition protein [Bacillus sp. m3-13]
Length = 231
Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 131/218 (60%), Gaps = 3/218 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ E +T E +++ IVPN + PR F E +E+L +I++HGIIQP++VR
Sbjct: 13 EKEEQEIVEKTDHEKIMQVAVKDIVPNRYQPRTVFVDERIEELSLTIRTHGIIQPIVVRQ 72
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
D Y+IIAGERR+RA + +P I++ ++ + +A++EN+QR++L+ +EEA+
Sbjct: 73 FDEDKYEIIAGERRWRAVQKLGWETIPAIVKEFNDAETASVALIENLQREELSAIEEAIA 132
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS-- 201
Y +L+ + TQ + +GK +S VAN LR+LKLPS +++ + +++I+ HAR L+
Sbjct: 133 YSKLLELHSLTQEALAQRLGKGQSTVANKLRLLKLPSDIQDALLQKKITERHARALIPLK 192
Query: 202 -TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+++ I+ K+++V+ TEE V + + K
Sbjct: 193 LPEKQVAVLAEILEKQLNVKQTEERVVKMLEAANPKPK 230
>gi|188587516|ref|YP_001919061.1| parB-like partition protein [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179352203|gb|ACB86473.1| parB-like partition protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 297
Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ + + I PNP+ PR F+ E L++L QSIK++G++QP++VR + Y+I+AGERR
Sbjct: 31 NIQEVPMEEIDPNPYQPRREFDEERLQELMQSIKTYGLLQPIVVRKVGER-YQIVAGERR 89
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
+ A + +V I+R + + + +A++EN+QR++LN +EEA GY++LI+E+G TQ
Sbjct: 90 YMALQRLKREKVSAIVRELRDSAMAALAMIENIQRENLNFIEEAEGYQKLINEFGLTQEV 149
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS--- 214
+ +G+S+S +AN LR+LKL +V++ + ++ HAR+L+ + ++
Sbjct: 150 LAQRLGRSQSTIANKLRLLKLSENVKKKLSTSNLTERHARSLLKLPNEEMQVDLLNQIES 209
Query: 215 ---KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
+ ++ + + + + R K + DL
Sbjct: 210 ENLNVKQTEERVNIMLDIEEDTDDNGQAKSKKRTKRPVIRDL 251
>gi|314935195|ref|ZP_07842548.1| putative DNA-binding protein [Staphylococcus hominis subsp. hominis
C80]
gi|313656530|gb|EFS20269.1| putative DNA-binding protein [Staphylococcus hominis subsp. hominis
C80]
Length = 279
Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 88/274 (32%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D + E S + I I IVPN + PR F+S
Sbjct: 1 MKKPFSK---------LFG-LKNKEDIVDYIEENRHSSVESIQIERIVPNRYQPRQVFDS 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +L +SI+ HG++QP++VR I+ +Y+IIAGERRFRA + S+ VIIR+++++
Sbjct: 51 SKITELAESIEEHGLLQPIVVRPIEENMYEIIAGERRFRALQSLHQSKADVIIRHMNDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSAIEEAEAYKKLLEIGQTTQSELAQSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V +R+ +I+ HAR + + +D L + ++ +K++V+ TE V+++ ++ + K
Sbjct: 171 KVIVRLREGKITERHARAVLSLKEADQEQLIEQVIVQKLNVKQTEARVKQKLAPEKVKAK 230
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
F+ +++ + ++ K I + I ++HR+
Sbjct: 231 TFQFAKDLTQARDEVGKSIQAIEDSGIHVEHRDK 264
>gi|227889291|ref|ZP_04007096.1| stage 0 DNA-binding protein [Lactobacillus johnsonii ATCC 33200]
gi|227850093|gb|EEJ60179.1| stage 0 DNA-binding protein [Lactobacillus johnsonii ATCC 33200]
Length = 293
Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 83/279 (29%), Positives = 152/279 (54%), Gaps = 20/279 (7%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI---DNGLYKII 92
+ I + I+PN + PR+ F E +E+L ++K G++QP+I+R G Y+II
Sbjct: 16 SKQVQEIELDKIMPNRYQPRHTFSDESIEELATTLKEQGLLQPIILRKPADGPEGEYEII 75
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERRFRAA+ +++P I+ ++D++ + +A+VEN+QR++LNP++EA Y QL+
Sbjct: 76 AGERRFRAAQSLKWAKIPAIVEDMDDEKAASLALVENLQRENLNPIDEAQAYVQLMKVNN 135
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQ 210
TQ ++ +GK++S++AN +R+LKL V+ + ++IS H R L ++ D +
Sbjct: 136 LTQTELAEQMGKTQSYIANKIRLLKLTPKVQGFLIDKKISQRHGRALLALNEEDQDTAVS 195
Query: 211 VIVSKKMSVRDTEELVQEQDNKK----------EKRKKIFEGSREKEKYLTDLEKKISSK 260
I+ ++V++TEE+V++ D + K + + K+K +
Sbjct: 196 EIIKSGLTVKETEEMVKDLDGYFAAQEKEKEEELEENKPEQTKKPKKKVQVRTANDFKVQ 255
Query: 261 VGL-NISIKHRNNKGQFCIKYETN---EQLKIICSLLGE 295
+ +IK + G +KY+ + + KI LL +
Sbjct: 256 INTIKKAIKMAKDSG-MTVKYKEDKKGDSYKITIELLKK 293
>gi|160944278|ref|ZP_02091507.1| hypothetical protein FAEPRAM212_01787 [Faecalibacterium prausnitzii
M21/2]
gi|158444460|gb|EDP21464.1| hypothetical protein FAEPRAM212_01787 [Faecalibacterium prausnitzii
M21/2]
Length = 279
Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 110/225 (48%), Gaps = 3/225 (1%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ + + I I P+P R F+ + L L QSI+ +G++Q + Y+
Sbjct: 18 ERKKPSGKLLSLPIDQIHPSPFQARKSFDEQELTALAQSIRENGLLQ-PVTVRKAAEGYE 76
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
++AGERR RA ++A ++ + I+ + + + + ++EN+QR DLNP E+A G ++
Sbjct: 77 LVAGERRLRACQLAKMTTISAILCSYADDRTAALGLLENIQRADLNPFEQAQGLRDVMVL 136
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSL 208
+ TQ + +G ++ AN LR+L+L + R+ + ++ HAR + + +
Sbjct: 137 WDCTQAEAAKRLGMAQPTFANKLRLLQLTADQRQFVLDNNLTERHARAVLRLPENRRSEA 196
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
I ++++ R T+ +++ N K R+ ++ +
Sbjct: 197 LITIAKRRLNARQTDSYIEQLLNSPPKAGHRISMVRDVRIFVNTI 241
>gi|187777375|ref|ZP_02993848.1| hypothetical protein CLOSPO_00931 [Clostridium sporogenes ATCC
15579]
gi|187774303|gb|EDU38105.1| hypothetical protein CLOSPO_00931 [Clostridium sporogenes ATCC
15579]
Length = 259
Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 92/251 (36%), Positives = 138/251 (54%), Gaps = 8/251 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
++ + IS I+PN + PR YF E +E+L QSIK +GIIQPL VR I +G Y+++AGE
Sbjct: 2 QKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVRKIKDGEYELVAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK L+EVP +I +V +K S IA++EN+QR+DLN EEA Y LI E+ YTQ
Sbjct: 62 RRLRAAKKLGLNEVPAVIIDVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA------ 209
+ + I+GK +S +AN +R+LKL VRE I + ++ H R L+ D
Sbjct: 122 DKLSEIIGKKQSTIANKMRLLKLSKEVREKILENNLTERHGRALLKIMDKDKQLKILSIV 181
Query: 210 --QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
+ + KK +EL QE + K + K++ K G+ +
Sbjct: 182 IEKKLNVKKTEELIEKELCQESNKDLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKANY 241
Query: 268 KHRNNKGQFCI 278
+ ++ + + I
Sbjct: 242 RSKDLEDKIQI 252
>gi|228474182|ref|ZP_04058919.1| protein YyaA [Staphylococcus hominis SK119]
gi|228271877|gb|EEK13214.1| protein YyaA [Staphylococcus hominis SK119]
Length = 279
Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 88/274 (32%), Positives = 163/274 (59%), Gaps = 12/274 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D + E S + I I IVPN + PR F+S
Sbjct: 1 MKKPFSK---------LFG-LKNKEDIVDYIEENRHSSVESIQIERIVPNRYQPRQVFDS 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ +L +SI+ HG++QP++VR I+ +Y+IIAGERRFRA + S+ VIIR+++++
Sbjct: 51 SKITELAESIEEHGLLQPIVVRPIEENMYEIIAGERRFRALQSLHQSKADVIIRHMNDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ +GKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSAIEEAEAYKKLLEIGQTTQSELAQSLGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
V +R+ +I+ HAR + + +D L + ++++K++V+ TE V+++ ++ + K
Sbjct: 171 KVIVRLREGKITERHARAVLSLKEADQEQLIEQVIAQKLNVKQTEARVKQKLAPEKVKAK 230
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
F+ +++ + ++ K I + I ++HR+
Sbjct: 231 TFQFAKDLTQARDEVGKSIQAIEDSGIHVEHRDK 264
>gi|167462789|ref|ZP_02327878.1| hypothetical protein Plarl_09530 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381365|ref|ZP_08055368.1| Spo0J-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321154941|gb|EFX47212.1| Spo0J-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 275
Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/213 (34%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
+ + I +++I+P+P+ PR F+ E +++LCQ+I++HG+IQP++VR N +++I
Sbjct: 15 SSSTDEVKHIPVNNIIPSPYQPRTVFDDERIDELCQTIRTHGVIQPIVVRVR-NNTFELI 73
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR RA K + +P IIR ++ + IA++EN+QR+ L +EEA Y+QL+ +
Sbjct: 74 AGERRLRAVKKLGMDTIPAIIREFNDSQAASIALIENLQREGLTAIEEASAYQQLMEMHH 133
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLA 209
TQ + +GKS+S +AN +R+L L V++ + I+ HAR L+ L
Sbjct: 134 LTQESLAQRLGKSQSTIANKIRLLNLSEPVKQALMDRSITERHARALLSLDKPEQQEKLL 193
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
I+ K+++V+ TE VQ +++KK +
Sbjct: 194 SEIIDKELNVKQTEMRVQFIKEANKEQKKTRKR 226
>gi|169351489|ref|ZP_02868427.1| hypothetical protein CLOSPI_02269 [Clostridium spiroforme DSM 1552]
gi|169291711|gb|EDS73844.1| hypothetical protein CLOSPI_02269 [Clostridium spiroforme DSM 1552]
Length = 255
Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 77/224 (34%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I+ I N + PR F+ E +E+L SIK +G+IQP+IVR N Y+IIAGERRFR
Sbjct: 7 KQIDINKIEANENQPRKVFDDEKIEELATSIKENGLIQPIIVRKY-NRNYQIIAGERRFR 65
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
A K+A L +P +I+++D+K AI+EN+QR++L+P+EEA Y+ LI Y Q ++
Sbjct: 66 ACKLAGLKTIPCVIKDIDDKQVDTYAIIENIQRENLSPIEEASAYKTLIDTYNMNQTELA 125
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+ VGK +S +AN LR+LKL V+ ++ ++I+ HAR ++S + +V+
Sbjct: 126 NKVGKKQSTIANKLRLLKLSDDVKYALKAKQITERHARAMLSLDEQKQQ-EVLKEVLKKS 184
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
+ ++ + + ++K + + + K I+ + L
Sbjct: 185 LNVKQTETLINKPVKTKEKPKKVTTKISKNFKIAMNTINQAIDL 228
>gi|323705839|ref|ZP_08117411.1| parB-like partition protein [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534835|gb|EGB24614.1| parB-like partition protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 267
Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 80/221 (36%), Positives = 138/221 (62%), Gaps = 3/221 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + I I PNP+ PR F++ L++LC SIK++G+IQP+ VR ++ Y++I+GE
Sbjct: 6 QQEIKYLPIDLIRPNPYQPRKIFDTANLQELCDSIKAYGVIQPISVRVVNGNSYELISGE 65
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA+K+A L+ +P I+ ++ S IA++EN+QRKDLN LEEA GY LI+++ TQ
Sbjct: 66 RRLRASKLAGLTTIPAIVFEAYDEDSAVIALIENLQRKDLNFLEEAEGYYNLINDHNLTQ 125
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVI 212
+ ++GKS+S +AN LR+LKL +++ + + ++ HAR L + +I
Sbjct: 126 EKLAIMLGKSQSTIANKLRLLKLSDNIKAKLIEHNLTERHARALLRLPDEEMQNKVIDII 185
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
+ KK +V++TE++VQ+ NK + + ++ ++ D+
Sbjct: 186 IKKKCNVKETEKIVQDMINKITMEEDKKQEKKKMMRFYKDI 226
>gi|288572893|ref|ZP_06391250.1| parB-like partition protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288568634|gb|EFC90191.1| parB-like partition protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 314
Score = 74.3 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/207 (31%), Positives = 117/207 (56%), Gaps = 3/207 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
I + I NP+ PR +F+ + + +L +SI G+IQPL+VR +++IAGE
Sbjct: 3 DSRLAEIELSRIRANPYQPRKHFDEDDILELAESIGEVGLIQPLVVRPSG-DFFELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA +A L V I+ VD+ +A+VEN+ RKDL+ +EEA + ++ G+ Q
Sbjct: 62 RRLRACLVAGLEAVSAIVLEVDSADQQIMALVENIHRKDLSSIEEAGSLKDILDRTGWGQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSD--PLSLAQVIV 213
+++ +G+S++ VAN LR+LKL V++M+ + + AR L+ ++ A+ ++
Sbjct: 122 SELARRLGRSQASVANKLRLLKLEEPVQKMVMEGLLGERSARALLRLPPALQIAAAKKVI 181
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIF 240
++++ ++ EELV + K K
Sbjct: 182 DRELTSKEVEELVNDLKEGKPLEPKTS 208
>gi|312623581|ref|YP_004025194.1| parb-like partition protein [Caldicellulosiruptor kronotskyensis
2002]
gi|312204048|gb|ADQ47375.1| parB-like partition protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 280
Score = 73.9 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 132/241 (54%), Gaps = 9/241 (3%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ + I I+PNP+ PR F+ +E+L SIK++G++QP+IVR Y +IAGERR
Sbjct: 21 IEDVPIEKILPNPYQPRVNFDERLIEELAVSIKTYGLLQPIIVRKKG-EFYYLIAGERRL 79
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA K S++ ++ NV + S +A++EN+QR+DL+ EEA GY+QL E+G TQ +I
Sbjct: 80 RACKHLGYSKIKAVVINVTDIESAILALIENIQRQDLDFFEEAQGYKQLSDEFGLTQVEI 139
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS---TSDPLSLAQVIVSK 215
VGK++S +AN +R+L+LP+ +R MIR+ +S HAR L+ D + IV
Sbjct: 140 AKRVGKTQSAIANKIRLLQLPADIRWMIREHGLSERHARALLKLESQEDMKYILSRIVEG 199
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK-----YLTDLEKKISSKVGLNISIKHR 270
++V TE L+ + + K+ K KI K +N IK
Sbjct: 200 GLTVSQTERLISDFLSGKKIAKTSRVIKISMNDCRVVYNTIKKALKIFQKTDINYDIKEN 259
Query: 271 N 271
Sbjct: 260 K 260
>gi|323340451|ref|ZP_08080707.1| chromosome partitioning protein SpoOJ [Lactobacillus ruminis ATCC
25644]
gi|323092140|gb|EFZ34756.1| chromosome partitioning protein SpoOJ [Lactobacillus ruminis ATCC
25644]
Length = 281
Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 123/222 (55%), Gaps = 2/222 (0%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
N + + + + I++ IVPN + PR F E + +L ++I+ HG++QP+I+
Sbjct: 9 NNKNQKSIETPKDDRDRVEEIAVSLIVPNRNQPRKIFSRESIGELAETIQDHGLLQPIIL 68
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
R +G Y+IIAGERRFRA +VP I++ + ++ S AI+EN+QR+ L +EEA
Sbjct: 69 RKCSDGKYEIIAGERRFRAVCSLKWEKVPAIVKEMGDRESASFAIIENLQREGLTAIEEA 128
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV- 200
Y +L+ TQ D+ +GKS+S +AN LR+LKL V+E I + IS H R +
Sbjct: 129 QAYSRLMELNQLTQQDLAKEIGKSQSFIANKLRLLKLCDKVKEAIMNKSISERHGRAMSG 188
Query: 201 -STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ + + + +SV++TE+LV+ K E +
Sbjct: 189 LEKGQQIYVLNEVAANHLSVKETEKLVKSLREKAEGKPGKKR 230
>gi|322392426|ref|ZP_08065886.1| ParB/SpoJ family partitioning protein [Streptococcus peroris ATCC
700780]
gi|321144418|gb|EFX39819.1| ParB/SpoJ family partitioning protein [Streptococcus peroris ATCC
700780]
Length = 178
Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 74/178 (41%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E + I I NP+ PR F E +++L QSIK +G+IQP+IVR Y+I+AGER
Sbjct: 2 EEFKLVRISDIQKNPYQPRKEFSEEKIKELAQSIKENGLIQPIIVRQSPVIGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+RA+ +A LSEVPVII+ + ++ + +I+EN+QR+DLNP+EEA Y+ LI + GYT
Sbjct: 62 RYRASIVAGLSEVPVIIKKLSDQDMMIHSIIENLQREDLNPIEEAKAYQSLIDK-GYTHA 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
+I +GKSR ++ NI+R+L LP+ + + ++S HAR L+ I+
Sbjct: 121 EIADKMGKSRPYITNIVRLLTLPNFILTEVEIGKLSQAHARLLIQLPVEEQKNYSIIF 178
>gi|300857408|ref|YP_003782392.1| putative chromosome partitioning protein [Clostridium ljungdahlii
DSM 13528]
gi|300437523|gb|ADK17290.1| predicted chromosome partitioning protein [Clostridium ljungdahlii
DSM 13528]
Length = 257
Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 75/166 (45%), Positives = 112/166 (67%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
++ + I + I+PN + PR YF E LE+L QSI S+GI+QPL VR + Y+++AGE
Sbjct: 2 QKNVNYIPVDLILPNVYQPRKYFNEESLEELAQSISSYGIVQPLSVRKLGENKYELVAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK A L+EVPVII ++ +K S IA++EN+QR++LN LEEA Y LI ++ YTQ
Sbjct: 62 RRLRAAKKAGLTEVPVIIVDISDKESAAIALLENLQRENLNFLEEAEAYYNLIKDHSYTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+ +GK +S +AN +R+L+L +R M+ + ++ HAR L+
Sbjct: 122 EKLAETIGKKQSTIANKIRLLRLDKEIRIMLLENNLTERHARALLK 167
>gi|168181107|ref|ZP_02615771.1| parB family protein [Clostridium botulinum NCTC 2916]
gi|168183718|ref|ZP_02618382.1| ParB family protein [Clostridium botulinum Bf]
gi|226951092|ref|YP_002806183.1| parB family protein [Clostridium botulinum A2 str. Kyoto]
gi|237797097|ref|YP_002864649.1| parB family protein [Clostridium botulinum Ba4 str. 657]
gi|182668142|gb|EDT80121.1| parB family protein [Clostridium botulinum NCTC 2916]
gi|182673267|gb|EDT85228.1| ParB family protein [Clostridium botulinum Bf]
gi|226841795|gb|ACO84461.1| parB family protein [Clostridium botulinum A2 str. Kyoto]
gi|229262907|gb|ACQ53940.1| parB family protein [Clostridium botulinum Ba4 str. 657]
Length = 259
Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 91/253 (35%), Positives = 139/253 (54%), Gaps = 10/253 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
++ + IS I+PN + PR YF E +E+L QSIK +GIIQPL VR I +G Y+++AGE
Sbjct: 2 QKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVRKIKDGEYELVAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK L+EVP +I +V +K S IA++EN+QR+DLN EEA Y LI E+ YTQ
Sbjct: 62 RRLRAAKKLGLNEVPAVIIDVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA------ 209
+ + ++GK +S +AN +R+LKLP VRE I + ++ H R L+ +D
Sbjct: 122 DKLSEVIGKKQSTIANKMRLLKLPKEVREKILENNLTERHGRALLKINDKDKQLKILAIV 181
Query: 210 --QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
+ + K +EL + + K + K++ K G+ +
Sbjct: 182 IEKKLNVKNTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKANY 241
Query: 268 KHR--NNKGQFCI 278
+ + ++K Q I
Sbjct: 242 RSKDLDDKIQITI 254
>gi|167754939|ref|ZP_02427066.1| hypothetical protein CLORAM_00443 [Clostridium ramosum DSM 1402]
gi|237735333|ref|ZP_04565814.1| nucleoid occlusion protein [Mollicutes bacterium D7]
gi|167704989|gb|EDS19568.1| hypothetical protein CLORAM_00443 [Clostridium ramosum DSM 1402]
gi|229381078|gb|EEO31169.1| nucleoid occlusion protein [Coprobacillus sp. D7]
Length = 255
Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 138/231 (59%), Gaps = 6/231 (2%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I I N + PR F+ E +E+L SIK +G+IQP+IVR + G Y+I+AGERR+R
Sbjct: 7 KQIDIEKISANENQPRTVFDDEKIEELAASIKENGLIQPIIVRKYNRG-YQIVAGERRYR 65
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
A+K+A L VP +I+++D+K +AI+EN+QR++L+P+EEA Y+ LI Y Q ++
Sbjct: 66 ASKLAGLKTVPCVIKDIDDKQVDTLAIIENIQRENLSPIEEANAYKTLIDTYDMNQTELA 125
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKM 217
+ VGK +S +AN LR+LKL V+ ++ ++I+ HAR ++ ++ Q ++ K +
Sbjct: 126 NKVGKKQSTIANKLRLLKLSDDVKHALKSKQITERHARAMIGLEADKQQTVLQEVLKKSL 185
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEG---SREKEKYLTDLEKKISSKVGLNI 265
+V+ TE L+ + K K KK + + + ++ K G+ +
Sbjct: 186 NVKQTESLISKPVKTKPKNKKGPTKVSRNFKIAINTINQATELIQKSGIEV 236
>gi|283768651|ref|ZP_06341563.1| ParB-like partition protein [Bulleidia extructa W1219]
gi|283105043|gb|EFC06415.1| ParB-like partition protein [Bulleidia extructa W1219]
Length = 266
Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
+ + + +VP+ + PR +F+ E LE+L QSIK G+IQP+ VR Y+I
Sbjct: 9 EKKDESRIIQLPVDKVVPSRYQPRLHFDQEALEELAQSIKETGLIQPITVRYTG-NHYEI 67
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
IAGERRFRA + +P + + + ++A+VENVQR++L+ +EEA Y +L+ +
Sbjct: 68 IAGERRFRACEKLGYRTIPGFVMTPTEEQAAQMALVENVQRENLSAVEEAKSYVELMRQS 127
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
TQ + +GKS+S VAN +R+L LP +++ + +I+ HAR L++
Sbjct: 128 SLTQEQVAHKIGKSQSSVANKIRLLNLPEEIQQGVIDNKITERHARALLTIPQEQQKEAY 187
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ + + + D K K+ K R K +
Sbjct: 188 HYIVENGLNVRQSEIYLSDISKTKKIKKIHFKRGYAKNIK 227
>gi|222530698|ref|YP_002574580.1| parB-like partition protein [Caldicellulosiruptor bescii DSM 6725]
gi|222457545|gb|ACM61807.1| parB-like partition protein [Caldicellulosiruptor bescii DSM 6725]
Length = 280
Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 132/241 (54%), Gaps = 9/241 (3%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ + I I+PNP+ PR F+ +E+L SIK++G++QP+IVR Y +IAGERR
Sbjct: 21 IEDVPIEKILPNPYQPRVNFDERLIEELAVSIKTYGLLQPIIVRKKG-EYYYLIAGERRL 79
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA K S++ ++ NV + S +A++EN+QR+DL+ EEA GY+QL E+G TQ +I
Sbjct: 80 RACKHLGYSKIKAVVINVTDIESAILALIENIQRQDLDFFEEAQGYKQLSDEFGLTQVEI 139
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS---TSDPLSLAQVIVSK 215
VGK++S +AN +R+L+LP+ +R +IR+ +S HAR L+ D + I+
Sbjct: 140 AKRVGKTQSAIANKIRLLQLPADIRWVIREHGLSERHARALLKLESQEDMKYILSRIIEG 199
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK-----YLTDLEKKISSKVGLNISIKHR 270
++V TE L+ + + K+ K KI K +N IK
Sbjct: 200 NLTVSQTERLISDFLSGKKIAKTSRVIKISMNDCRVVYNTIKKALKIFQKTDINYDIKEN 259
Query: 271 N 271
Sbjct: 260 K 260
>gi|307265447|ref|ZP_07547003.1| parB-like partition protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919561|gb|EFN49779.1| parB-like partition protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 263
Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 140/213 (65%), Gaps = 3/213 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+ + I SI P+P+ PR F+ + L++L +SIK +G++QP+ VR I N Y+++AGER
Sbjct: 2 QEISYLPIDSIRPSPYQPRKTFDIKNLQELSESIKVYGVLQPITVRMIGNNSYELVAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RA+K+A L+E+P II N ++ + +A++EN+QR+DLN +EEA GY LI+++ TQ
Sbjct: 62 RLRASKLAGLTEIPAIIVNAQDEDAAVLALIENLQREDLNFIEEAEGYYNLINDHHLTQE 121
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIV 213
+ ++GKS+S +AN LRILKL ++E + + +++ HAR L +VIV
Sbjct: 122 QLAKMLGKSQSTIANKLRILKLSKEIKEKLLENDLTERHARALLRLPDEELQKKALEVIV 181
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
KK++V TE+L+Q+ +K K+++ + + +K
Sbjct: 182 KKKLNVSQTEKLIQDMIDKITKQQEETKKANKK 214
>gi|56965871|ref|YP_177605.1| transcriptional regulator [Bacillus clausii KSM-K16]
gi|81600612|sp|Q5WAG6|NOC_BACSK RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|56912117|dbj|BAD66645.1| transcriptional regulator [Bacillus clausii KSM-K16]
Length = 283
Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 1/175 (0%)
Query: 26 DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID 85
D + T E ++I IVPN PR F+ + + +L Q+I++HG+IQP++VR D
Sbjct: 13 DKNDDAELTANEEVQQLAIKDIVPNRFQPRTLFDEDRIAELAQTIRTHGVIQPIVVRVRD 72
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
+ Y+IIAGERR+RA +P I++ ++ + IA++EN+QR+ L +EEA Y
Sbjct: 73 DK-YEIIAGERRWRAVTSLQWETIPAIVKEFNDSQTASIALIENLQREGLTAIEEATAYA 131
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
+LI + TQ + +GK +S +AN LR+L LP +V++ I +IS HAR L+
Sbjct: 132 KLIEIHNLTQESLAQRLGKGQSTIANKLRLLHLPQAVQDAILNRDISERHARALI 186
>gi|223983435|ref|ZP_03633621.1| hypothetical protein HOLDEFILI_00901 [Holdemania filiformis DSM
12042]
gi|223964607|gb|EEF68933.1| hypothetical protein HOLDEFILI_00901 [Holdemania filiformis DSM
12042]
Length = 258
Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 77/207 (37%), Positives = 118/207 (57%), Gaps = 3/207 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
ISI I PN H PR F + L +L QSI+ +G+IQ I D Y+IIAGERR
Sbjct: 3 EVREISIEQIHPNRHQPRLEFNEDALMELAQSIRENGLIQ-PITVREDEDGYEIIAGERR 61
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
++A +A SEVP + + D + E+A+VEN+QR++L +EEA Y Q++ G TQ +
Sbjct: 62 YKACILAGYSEVPCNVMSADEQKLAELALVENIQRENLTSIEEAKAYIQIMRSAGMTQEE 121
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSK 215
+ + +GKS+S +AN +R+L LP ++E I +I+ HAR L V + + IV K
Sbjct: 122 LAAKMGKSQSTIANKVRLLNLPDEIQEGISSRKITERHARALLSVEPDKQQEVYEKIVKK 181
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEG 242
M+VR E+L+ + + + +
Sbjct: 182 GMNVRQAEQLITSMKETPQTKPEAKKP 208
>gi|148381577|ref|YP_001256118.1| parB family protein [Clostridium botulinum A str. ATCC 3502]
gi|153932673|ref|YP_001385954.1| parB family protein [Clostridium botulinum A str. ATCC 19397]
gi|153935202|ref|YP_001389361.1| parB family protein [Clostridium botulinum A str. Hall]
gi|153939342|ref|YP_001392996.1| parB family protein [Clostridium botulinum F str. Langeland]
gi|170754545|ref|YP_001783275.1| parB family protein [Clostridium botulinum B1 str. Okra]
gi|148291061|emb|CAL85198.1| chromosome partitioning protein (putative stage 0 sporulation
protein J) [Clostridium botulinum A str. ATCC 3502]
gi|152928717|gb|ABS34217.1| parB family protein [Clostridium botulinum A str. ATCC 19397]
gi|152931116|gb|ABS36615.1| parB family protein [Clostridium botulinum A str. Hall]
gi|152935238|gb|ABS40736.1| parB family protein [Clostridium botulinum F str. Langeland]
gi|169119757|gb|ACA43593.1| parB family protein [Clostridium botulinum B1 str. Okra]
gi|295320971|gb|ADG01349.1| parB family protein [Clostridium botulinum F str. 230613]
gi|322807964|emb|CBZ05539.1| chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Clostridium botulinum H04402 065]
Length = 259
Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 90/253 (35%), Positives = 138/253 (54%), Gaps = 10/253 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
++ + IS I+PN + PR YF E +E+L QSIK +GIIQPL VR I +G Y+++AGE
Sbjct: 2 QKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVREIKDGEYELVAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK L+EVP +I +V +K S IA++EN+QR+DLN EEA Y LI E+ YTQ
Sbjct: 62 RRLRAAKKLGLNEVPAVIIDVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA------ 209
+ + ++GK +S +AN +R+LKL VRE I + ++ H R L+ +D
Sbjct: 122 DKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTERHGRALLKINDKDKQLKILAIV 181
Query: 210 --QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
+ + K +EL + + K + K++ K G+ +
Sbjct: 182 IEKKLNVKSTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKANY 241
Query: 268 KHR--NNKGQFCI 278
+ + ++K Q I
Sbjct: 242 RSKDLDDKIQITI 254
>gi|15896962|ref|NP_350311.1| stage 0 sporulation protein J [Clostridium acetobutylicum ATCC 824]
gi|15026838|gb|AAK81651.1|AE007868_7 Stage 0 sporulation J, ParB family of DNA-binding proteins
[Clostridium acetobutylicum ATCC 824]
Length = 260
Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 96/259 (37%), Positives = 155/259 (59%), Gaps = 10/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+S IS+ +I N + PR YF+ L++L +SI ++GIIQP+ VR +D+ ++I+AGER
Sbjct: 2 DSVLYISVDNICANSNQPRKYFDKAALKELAESIDNYGIIQPITVRKVDDDKFEIVAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAAK+A L +VPVI+ ++D K S EIA++EN+QR++L+ +EEA Y LI +YGYTQ+
Sbjct: 62 RFRAAKIAGLDKVPVILIDIDEKESAEIALLENIQRENLSYMEEAEAYYNLIEQYGYTQD 121
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ VGK +S +AN LR+LKL ++VR+ + + ++ HAR L+ SD S VI S
Sbjct: 122 KLAQSVGKKQSTIANKLRLLKLDNNVRKALLENNLTERHARALLKLSDKKSQMSVIKSV- 180
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN---NK 273
+ + + ++ KK+ + +++ +D +K+I G I I +K
Sbjct: 181 -----VSKGLNVKKTEELIEKKLDKVYKKENDIASDGKKRIKGIFGSQIYINTIKQVFDK 235
Query: 274 GQFCIKYETNEQLKIICSL 292
KY++ E L +
Sbjct: 236 YGIKAKYKSKE-LDDTIEV 253
>gi|170759937|ref|YP_001788982.1| parB family protein [Clostridium botulinum A3 str. Loch Maree]
gi|169406926|gb|ACA55337.1| parB family protein [Clostridium botulinum A3 str. Loch Maree]
Length = 259
Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 90/253 (35%), Positives = 138/253 (54%), Gaps = 10/253 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
++ + IS I+PN + PR YF E +E+L QSIK +GIIQPL VR I +G Y+++AGE
Sbjct: 2 QKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVRKIKDGEYELVAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK L+EVP +I +V +K S IA++EN+QR+DLN EEA Y LI E+ YTQ
Sbjct: 62 RRLRAAKKLGLNEVPAVIIDVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA------ 209
+ + ++GK +S +AN +R+LKL VRE I + ++ H R L+ +D
Sbjct: 122 DKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTERHGRALLKINDEDKQLKILAIV 181
Query: 210 --QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
+ + K +EL + + K + K++ K G+ +
Sbjct: 182 IEKKLNVKNTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKANY 241
Query: 268 KHR--NNKGQFCI 278
+ + ++K Q I
Sbjct: 242 RSKDLDDKIQITI 254
>gi|268320134|ref|YP_003293790.1| chromosome-partitioning protein ParB2 [Lactobacillus johnsonii
FI9785]
gi|262398509|emb|CAX67523.1| chromosome-partitioning protein ParB2 [Lactobacillus johnsonii
FI9785]
Length = 293
Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 82/279 (29%), Positives = 152/279 (54%), Gaps = 20/279 (7%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI---DNGLYKII 92
+ I + I+PN + PR+ F E +E+L ++K G++QP+I+R G Y+II
Sbjct: 16 SKQVQEIELDKIMPNRYQPRHTFSDESIEELATTLKEQGLLQPIILRKPADGPEGEYEII 75
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERRFRAA+ +++P I+ ++D++ + +A+VEN+QR++LNP++EA Y QL+
Sbjct: 76 AGERRFRAAQSLKWAKIPAIVEDMDDEKAASLALVENLQRENLNPIDEAQAYVQLMKVNN 135
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQ 210
TQ ++ +GK++S++AN +R+LKL V+ + ++IS H R L ++ D +
Sbjct: 136 LTQTELAEQMGKTQSYIANKIRLLKLTPKVQGFLIDKKISQRHGRALLALNEEDQDTAVS 195
Query: 211 VIVSKKMSVRDTEELVQEQDNKK----------EKRKKIFEGSREKEKYLTDLEKKISSK 260
I+ ++V++TEE++++ D + K + + K+K +
Sbjct: 196 EIIKSGLTVKETEEMIKDLDGYFAAQEKEKEEELEENKPEQTKKPKKKVQVRTANDFKVQ 255
Query: 261 VGL-NISIKHRNNKGQFCIKYETN---EQLKIICSLLGE 295
+ +IK + G +KY+ + + KI LL +
Sbjct: 256 INTIKKAIKMAKDSG-MTVKYKEDKKGDSYKITIELLKK 293
>gi|73663750|ref|YP_302531.1| transcriptional regulator [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72496265|dbj|BAE19586.1| putative transcriptional regulator [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 279
Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 81/247 (32%), Positives = 135/247 (54%), Gaps = 10/247 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M +SK L G + D E S + I IVPN + PR FE
Sbjct: 1 MKKPFSK---------LFG-LKNKDDIVGYIEEDYNNSVESIHTERIVPNRYQPRQVFEP 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+++L +SI+ HG++QP++VR I+ +++IIAGERRFRA + S + VIIR +D++
Sbjct: 51 NKIKELAESIEEHGLLQPIVVRPIEEDMFEIIAGERRFRALQSLSKTHADVIIRYLDDEE 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ +A++EN+QR++L+ +EEA Y++L+ TQ+++ VGKS+S +AN LR+LKL
Sbjct: 111 TAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSVGKSQSFIANKLRLLKLAP 170
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
V E +R+ +I+ HAR ++S S+ V + + + + ++ K
Sbjct: 171 KVLERLRESKITERHARAMLSLSEEDQEILVETVISQKLNVKQTEARVKQKIGPEKVKAQ 230
Query: 241 EGSREKE 247
EK+
Sbjct: 231 RFEFEKD 237
>gi|302872907|ref|YP_003841543.1| parB-like partition protein [Caldicellulosiruptor obsidiansis OB47]
gi|302575766|gb|ADL43557.1| parB-like partition protein [Caldicellulosiruptor obsidiansis OB47]
Length = 280
Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 131/217 (60%), Gaps = 4/217 (1%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + E S + I + ++PNP+ PR+ F+ + +E+L SIK++G++QP+IVR
Sbjct: 9 TNKADIEKELYSIEDIPVEKVLPNPYQPRSNFDEKLIEELALSIKTYGLLQPIIVRKKG- 67
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
Y +IAGERR RA K S++ II NV + S +A++EN+QR+DL+ EEA GY+Q
Sbjct: 68 EFYYLIAGERRLRAFKHLGYSKIKAIIINVTDIESAILALIENIQRQDLDFFEEAQGYKQ 127
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS---TS 203
L E+G TQ +I VGK++S +AN +R+L+LP+ VR +R+ +S HAR L+
Sbjct: 128 LADEFGLTQVEIAKRVGKTQSAIANKIRLLQLPADVRWTVREHGLSERHARALLRLESEE 187
Query: 204 DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
D ++ I+ ++V TE L+ E N K+ K
Sbjct: 188 DMRNVLSRIIEGGLTVSQTERLITEYLNNKKSLKTGK 224
>gi|325511139|gb|ADZ22775.1| Stage 0 sporulation J, ParB family of DNA-binding proteins
[Clostridium acetobutylicum EA 2018]
Length = 264
Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 96/259 (37%), Positives = 155/259 (59%), Gaps = 10/259 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+S IS+ +I N + PR YF+ L++L +SI ++GIIQP+ VR +D+ ++I+AGER
Sbjct: 6 DSVLYISVDNICANSNQPRKYFDKAALKELAESIDNYGIIQPITVRKVDDDKFEIVAGER 65
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAAK+A L +VPVI+ ++D K S EIA++EN+QR++L+ +EEA Y LI +YGYTQ+
Sbjct: 66 RFRAAKIAGLDKVPVILIDIDEKESAEIALLENIQRENLSYMEEAEAYYNLIEQYGYTQD 125
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ VGK +S +AN LR+LKL ++VR+ + + ++ HAR L+ SD S VI S
Sbjct: 126 KLAQSVGKKQSTIANKLRLLKLDNNVRKALLENNLTERHARALLKLSDKKSQMSVIKSV- 184
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN---NK 273
+ + + ++ KK+ + +++ +D +K+I G I I +K
Sbjct: 185 -----VSKGLNVKKTEELIEKKLDKVYKKENDIASDGKKRIKGIFGSQIYINTIKQVFDK 239
Query: 274 GQFCIKYETNEQLKIICSL 292
KY++ E L +
Sbjct: 240 YGIKAKYKSKE-LDDTIEV 257
>gi|254520705|ref|ZP_05132761.1| stage 0 sporulation protein J [Clostridium sp. 7_2_43FAA]
gi|226914454|gb|EEH99655.1| stage 0 sporulation protein J [Clostridium sp. 7_2_43FAA]
Length = 260
Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 1/211 (0%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
IS++ I PN + PR +F E LE+L QSIK HGIIQP+ VR ++++AGE
Sbjct: 4 NREITSISVNKIFPNTYQPRRFFNEEALEELSQSIKEHGIIQPITVRRRG-ENFELVAGE 62
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RAA+MA L VP I + + S EIA++EN+QR+DLN +EEA Y LI+++ +TQ
Sbjct: 63 RRWRAARMAELENVPCNIIEITDTQSAEIALLENLQREDLNFIEEAEAYYNLINDHKFTQ 122
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+++ +GK +S +AN LR+LKL SVR + + +++ HAR L+S + +V+
Sbjct: 123 DELAKRMGKKQSTIANKLRLLKLTPSVRSVCIENKLTERHARALLSLPNEELQLKVVEKV 182
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ + + + + + K ++EK
Sbjct: 183 IKNSLNVKATEEAVNKELLKLAGEELNNKEK 213
>gi|304318129|ref|YP_003853274.1| parB-like protein partition protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779631|gb|ADL70190.1| parB-like protein partition protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 267
Score = 73.2 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 145/240 (60%), Gaps = 4/240 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + I I PNP+ PR F++ L++LC SIK++G+IQP+ VR ++ Y++I+GE
Sbjct: 6 QQEIKYLPIDLIRPNPYQPRKIFDTANLQELCDSIKAYGVIQPISVRVVNGNSYELISGE 65
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA+K+A L +P I+ ++ S IA++EN+QRKDLN LEEA GY LI+++ TQ
Sbjct: 66 RRLRASKLAGLKTIPAIVFEAYDEDSAVIALIENLQRKDLNFLEEAEGYYNLINDHNLTQ 125
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVI 212
+ +++GKS+S +AN LR+LKL S++ + + ++ HAR L +I
Sbjct: 126 EKLAAMLGKSQSTIANKLRLLKLNDSIKAKLIENNLTERHARALLRLPDEELQNKAIDII 185
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
+ KK +V++TE++VQ+ NK + + ++ K+ D+ + + + ISI ++
Sbjct: 186 IKKKCNVKETEKIVQDMINKITMNEDKKQEKKKMMKFYKDI-RIFVNTIKQAISIMKKSG 244
>gi|251800242|ref|YP_003014973.1| parB-like partition protein [Paenibacillus sp. JDR-2]
gi|247547868|gb|ACT04887.1| parB-like partition protein [Paenibacillus sp. JDR-2]
Length = 272
Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 78/222 (35%), Positives = 121/222 (54%), Gaps = 1/222 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ E I I I +P PR F+ E +++LCQ+IK+HG+IQP++VRA NG Y
Sbjct: 12 SDQRSGQEEVRQIPIQDIDTSPFQPRTIFDDERIDELCQTIKTHGVIQPIVVRAR-NGRY 70
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERR+RA +P IIR ++ + IA++EN+QR++L +EEA+ Y++LI
Sbjct: 71 EIIAGERRWRAVTKLGYDTIPAIIREFNDSQTASIALIENLQRENLTAIEEAVAYQKLIE 130
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
+ TQ + +GKS+S +AN LR+L L +V+E + +IS HAR L+S
Sbjct: 131 LHELTQESLAQRLGKSQSTIANKLRLLGLNDTVKEALASRKISERHARALLSLDTEELQN 190
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
QV+ + ++ + KE+ K K
Sbjct: 191 QVLEEIITKELNVKQTENRIASLKEEPKAKQTKRFAMPKNTR 232
>gi|308071636|ref|YP_003873241.1| YyaA protein [Paenibacillus polymyxa E681]
gi|305860915|gb|ADM72703.1| YyaA protein [Paenibacillus polymyxa E681]
Length = 272
Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 124/232 (53%), Gaps = 1/232 (0%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
+ + I + IV +P+ PR F+ E +++LCQ+IK+HG+IQP++VR NG Y+I
Sbjct: 13 ERSTGDEIKQIPVRDIVSSPYQPRTIFDDEKIDELCQTIKTHGVIQPIVVRFR-NGQYEI 71
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
IAGERR+RA + +P I+R ++ + IA++EN+QR+ L +EEA+ Y++LI +
Sbjct: 72 IAGERRWRAVTKLGMETIPAIVREFNDSQAASIALIENLQREGLTAIEEAVAYQKLIDLH 131
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
TQ + +GKS+S +AN +R+L LP V+E + + ++S HAR L+S +V
Sbjct: 132 QLTQESLAQRLGKSQSTIANKIRLLHLPERVKEALMERKVSERHARALLSLETEELQYKV 191
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
+ + ++ K+ K + I + +
Sbjct: 192 LDEVIAKELNVKQTEARVAFYKQVSTNKKSKRISFTKDVRLALNTIRQSIDM 243
>gi|150019904|ref|YP_001312158.1| parB-like partition protein [Clostridium beijerinckii NCIMB 8052]
gi|149906369|gb|ABR37202.1| parB-like partition protein [Clostridium beijerinckii NCIMB 8052]
Length = 260
Score = 72.8 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 126/211 (59%), Gaps = 1/211 (0%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
ISI+ ++PN + PR YF E +E+L QSI+ HGIIQP+ VR ++++AGE
Sbjct: 2 NNEIVSISINKVIPNIYQPRKYFNEEAIEELSQSIREHGIIQPITVRRRGEV-FELVAGE 60
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK+A L VP I ++ + S +IA++EN+QR+DLN +EEA Y LIS++ +TQ
Sbjct: 61 RRLRAAKLAELETVPCNIIDITDSESAQIALLENLQREDLNYIEEAEAYYNLISDHNFTQ 120
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+++ +GK +S +AN LR+LKL S VRE+ K +++ HAR L++ +++
Sbjct: 121 DELAKKMGKKQSTIANKLRLLKLSSEVRELCLKNKLTERHARALLTIPTEEMQLRIVQKV 180
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ ++ + + + K ++ K
Sbjct: 181 IKDGLNVKKTEELINKELLKLAGEELKNKNK 211
>gi|238854397|ref|ZP_04644739.1| partition protein, ParB family [Lactobacillus jensenii 269-3]
gi|260665090|ref|ZP_05865940.1| chromosome partitioning protein [Lactobacillus jensenii SJ-7A-US]
gi|282931801|ref|ZP_06337286.1| nucleoid occlusion protein [Lactobacillus jensenii 208-1]
gi|313472997|ref|ZP_07813484.1| protein YyaA [Lactobacillus jensenii 1153]
gi|238833019|gb|EEQ25314.1| partition protein, ParB family [Lactobacillus jensenii 269-3]
gi|239528800|gb|EEQ67801.1| protein YyaA [Lactobacillus jensenii 1153]
gi|260561144|gb|EEX27118.1| chromosome partitioning protein [Lactobacillus jensenii SJ-7A-US]
gi|281304108|gb|EFA96225.1| nucleoid occlusion protein [Lactobacillus jensenii 208-1]
Length = 280
Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 73/264 (27%), Positives = 138/264 (52%), Gaps = 10/264 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+K + + + I+PN + PR+ F +E L Q+++ G++QP++VR +
Sbjct: 6 SKKNEIPKEKQIQDLELSKIIPNRYQPRHEFSEASIEQLAQTLEQEGLLQPIVVREKGDN 65
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y+IIAGERRFRAAK + + +P I++N+D++ + +A++EN+QR++LNP++EA YE L
Sbjct: 66 -YEIIAGERRFRAAKSLNWTTIPAIVQNMDDQKAASLALIENLQRENLNPIDEARAYEDL 124
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ TQ + +GKS+S++AN LR+LKL V+ + I+ H R ++ +
Sbjct: 125 MKLNELTQTALAKDMGKSQSYIANKLRLLKLEPEVQSYLVSGTITARHGRAMLGLTPVEQ 184
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE-----GSREKEKYLTDLEKKISSKVG 262
+ + + E +D KK E ++K + K + ++
Sbjct: 185 SHVLHEILQKKLSVKETEAICEDVDGYFAKKAEEVKKPAKKEPEKKRVVKTAKDLKVQIN 244
Query: 263 L-NISIKHRNNKGQFCIKYETNEQ 285
++K + G I+ +++E+
Sbjct: 245 TIKQAVKLAKDSG---IQVKSHEE 265
>gi|329768080|ref|ZP_08259590.1| hypothetical protein HMPREF0428_01287 [Gemella haemolysans M341]
gi|328838348|gb|EGF87958.1| hypothetical protein HMPREF0428_01287 [Gemella haemolysans M341]
Length = 294
Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 74/257 (28%), Positives = 133/257 (51%), Gaps = 4/257 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
++ EK + + I + IVPN + PR F E +++L +SIK +G++Q
Sbjct: 8 FSKLYDLTQRAEKVGISDDDVLREILVEKIVPNKYQPRREFTEEKIKELAESIKQNGLLQ 67
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
+ VR I NG Y++IAGERR RA K I++ + ++ +A++EN+QR++L P
Sbjct: 68 SITVRDIGNGFYELIAGERRLRAIKYLQYPTTKAIVKELTDEQMATLALIENIQREELTP 127
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EEA Y++L+S TQ+++ +GK+++ VAN LR+LKL V + I ++I+ H R
Sbjct: 128 IEEAHAYQELLSINKLTQDELAKSLGKTQATVANKLRLLKLSDKVIDAINTKKITERHGR 187
Query: 198 TLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
+V Q++ + E++ KK+ + + + +K + L
Sbjct: 188 AMVKLDASAQEKLLVQILSQNLNVSQTEEKIDTYLKIKKDIKVFNTVVNYDGQKVIAKLT 247
Query: 255 KKISSKVGLNISIKHRN 271
K+I+ K+ +I
Sbjct: 248 KEIA-KLEEKYNISLNK 263
>gi|315644287|ref|ZP_07897457.1| parB-like partition protein [Paenibacillus vortex V453]
gi|315280662|gb|EFU43951.1| parB-like partition protein [Paenibacillus vortex V453]
Length = 272
Score = 72.8 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 128/234 (54%), Gaps = 1/234 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ I ++ IV +P+ PR F+ + +++L Q+IK+HG+IQP++VR NG+Y
Sbjct: 12 AAERNQGDEVKQIPVNEIVSSPYQPRTIFDDDKIDELLQTIKTHGVIQPIVVRVR-NGVY 70
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERR+RA K L +P I+R ++ + IA++EN+QR+ L +EEA+ Y++LI
Sbjct: 71 EIIAGERRWRAVKKLGLDTIPAIVREFNDSQAASIALIENLQREGLTSIEEAVAYQKLID 130
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
+ TQ + +GKS+S +AN +R+L+LP +V+ + + +++ HAR L+S + +
Sbjct: 131 LHQLTQESLAQRLGKSQSTIANKIRLLQLPEAVKLALMERKVTERHARALLSLDNEETQL 190
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
+V+ + ++ KE K + I + +
Sbjct: 191 KVLDEIITKELNVKQTEARIAFYKEVTTMKKSKRISYSKDVRLALNTIRQSIDM 244
>gi|288960891|ref|YP_003451230.1| chromosome partitioning protein [Azospirillum sp. B510]
gi|288913199|dbj|BAI74686.1| chromosome partitioning protein [Azospirillum sp. B510]
Length = 277
Score = 72.4 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ + I PNP+ PR F+ E L L SI+ HG+ QP+ VR + ++++ GERR
Sbjct: 15 LVEVPLDRIAPNPNQPRREFDEEELRGLAASIERHGLQQPIGVRQTADDQWQLVYGERRL 74
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA ++ + I+ D+ EIAIVEN+QR DLNPLEE+ +L +GY+ +
Sbjct: 75 RAMRLLGRETIFGILFTGDDDE--EIAIVENLQRSDLNPLEESDALARLAERHGYSHRQL 132
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMI 186
+G+ +++V +L +L ++RE
Sbjct: 133 AEALGRKKTYVTMMLSFQRLAPAIREDY 160
>gi|116630297|ref|YP_815528.1| Spo0J-like protein [Lactobacillus gasseri ATCC 33323]
gi|311110076|ref|ZP_07711473.1| conserved hypothetical protein [Lactobacillus gasseri MV-22]
gi|116095879|gb|ABJ61031.1| Effector of nucleoid occlusion Noc [Lactobacillus gasseri ATCC
33323]
gi|311065230|gb|EFQ45570.1| conserved hypothetical protein [Lactobacillus gasseri MV-22]
Length = 293
Score = 72.4 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 89/299 (29%), Positives = 158/299 (52%), Gaps = 28/299 (9%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
+L G + I + I + I+PN + PR+ F E +E+L ++K G+
Sbjct: 4 SLFGNRQKKIPESK--------QVQEIELDKIMPNRYQPRHTFSDESIEELATTLKEQGL 55
Query: 76 IQPLIVRAI---DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+QP+I+R G Y+IIAGERRFRAA+ +++P I+ N+D++ + +A+VEN+QR
Sbjct: 56 LQPIILRKPADGPEGEYEIIAGERRFRAAQSLKWAKIPAIVENMDDEKAASLALVENLQR 115
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
++LNP++EA Y QL+ TQ ++ +GK++S++AN +R+LKL V+ + ++IS
Sbjct: 116 ENLNPIDEAQAYVQLMKVNNLTQTELADQMGKTQSYIANKIRLLKLTPKVQGFLIDKKIS 175
Query: 193 LGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
H R L ++ D + I+ ++V++TEE+V++ D E +K+ E E+ K
Sbjct: 176 QRHGRALLALNEEDQDTAVSEIIKNGLTVKETEEMVKDLDGYFEAQKQAKEEELEENKPE 235
Query: 251 T----------DLEKKISSKVGL-NISIKHRNNKGQFCIKYETN---EQLKIICSLLGE 295
++ +IK + G +KY+ + + KI LL +
Sbjct: 236 KEKKPKKKVQVRTANDFKVQINTIKKAIKMAKDSG-MTVKYKEDKKGDSYKITIELLKK 293
>gi|310644868|ref|YP_003949627.1| parb-like protein [Paenibacillus polymyxa SC2]
gi|309249819|gb|ADO59386.1| ParB-like protein [Paenibacillus polymyxa SC2]
Length = 272
Score = 72.4 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 77/223 (34%), Positives = 130/223 (58%), Gaps = 5/223 (2%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
+ + I + IV +P+ PR F+ E +++LCQ+IK+HG+IQP++VR NG Y+I
Sbjct: 13 ERSNGDEIKQIPVRDIVSSPYQPRTIFDDEKIDELCQTIKTHGVIQPIVVRFR-NGQYEI 71
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
IAGERR+RA + +P I+R ++ + IA++EN+QR+ L +EEA+ Y++LI +
Sbjct: 72 IAGERRWRAVTKLGMETIPAIVREFNDSQAASIALIENLQREGLTAIEEAVAYQKLIDLH 131
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSL 208
TQ + +GKS+S +AN +R+L LP V+E + + ++S HAR L+ + +
Sbjct: 132 QLTQESLAQRLGKSQSTIANKIRLLHLPERVKEALMERKVSERHARALLSLETEELQYKV 191
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+++K+++V+ TE V KK S K+ L
Sbjct: 192 LDEVIAKELNVKQTEARVAFYKQ-VSTIKKSKRISFTKDVRLA 233
>gi|146297753|ref|YP_001181524.1| parB-like partition protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145411329|gb|ABP68333.1| ParB family protein [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 280
Score = 72.4 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 90/247 (36%), Positives = 134/247 (54%), Gaps = 9/247 (3%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
E + + I I+ ++PNP PR F+ + +E L +SIK++G++QP+IVR Y +I
Sbjct: 15 EKELYTIEMIPINKVLPNPFQPRTNFDEKLIEGLAESIKNYGLLQPIIVRKRGEV-YYLI 73
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR RA K ++ I+ NV + S +A++EN+QR+DL+ EEA GY+QLI E+G
Sbjct: 74 AGERRLRACKHLGFDKIKAIVINVTDIESAILALIENIQRQDLDFFEEAQGYKQLIEEFG 133
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS---TSDPLSLA 209
TQ +I VGK++S +AN +R+L LP VR +IR+ E+S HAR L+ D +
Sbjct: 134 LTQVEIAKRVGKTQSAIANKIRLLSLPPDVRWIIRENELSERHARALLKLESEEDMKYII 193
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK-----YLTDLEKKISSKVGLN 264
I+ ++V TE L+ E N K+ K KI K +N
Sbjct: 194 PKIIENGLTVAQTERLISEYLNNKKVTKNGKAIKVSMNDCRVIYNTIKKALKIFQKTDIN 253
Query: 265 ISIKHRN 271
IK
Sbjct: 254 YDIKENK 260
>gi|28209872|ref|NP_780816.1| stage 0 sporulation protein J [Clostridium tetani E88]
gi|28202307|gb|AAO34753.1| stage 0 sporulation protein J [Clostridium tetani E88]
Length = 271
Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 86/252 (34%), Positives = 139/252 (55%), Gaps = 11/252 (4%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
++ + +S I PN + PR F+ E +++L +SI S+GIIQPL VR + + Y++IAGE
Sbjct: 14 KDNINYVSTELICPNLYQPRKVFDEESIDELAKSINSYGIIQPLSVRKLSDDNYELIAGE 73
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK L +VPVI+ +V ++ S IA++EN+QR+DLN LEEA Y+ LI+E+ YTQ
Sbjct: 74 RRLRAAKKIGLEKVPVIVIDVTDRESAAIALLENIQREDLNFLEEAEAYQNLITEHNYTQ 133
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+ S++GK +S +AN +R+LKLP ++R + + ++ HAR ++ +
Sbjct: 134 EQLASVIGKKQSTIANKIRLLKLPQNIRLKLIENNLTERHARAMLRLPSEELQNSI---- 189
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN---N 272
+ + N +E K K+ D +K+I G I I +
Sbjct: 190 ---IDLIIKKGLNVKNTEEAIDKELLKLDNKDIG-KDGKKRIKGIFGSKIYINTVKQVFD 245
Query: 273 KGQFCIKYETNE 284
K KY++ +
Sbjct: 246 KYGVSAKYKSKD 257
>gi|312794736|ref|YP_004027659.1| parb-like partition protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181876|gb|ADQ42046.1| parB-like partition protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 280
Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 130/241 (53%), Gaps = 9/241 (3%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ + I ++PNP+ PR F+ +E+L SIKS+G++QP+IVR Y +IAGERR
Sbjct: 21 IEDVPIEKVLPNPYQPRTNFDERLIEELATSIKSYGLLQPIIVRKKGEL-YYLIAGERRL 79
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA K ++ I+ NV + S +A++EN+QR+DL+ EEA GY+QL E+G TQ +I
Sbjct: 80 RACKHLGYCKIKAIVINVTDIESAILALIENIQRQDLDFFEEAQGYKQLADEFGLTQVEI 139
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS---TSDPLSLAQVIVSK 215
VGK++S +AN +R+L+LP+ +R MIR+ +S HAR L+ D + I+
Sbjct: 140 AKRVGKTQSAIANKIRLLQLPAEIRWMIREHGLSERHARALLKLESQEDMKYILSRIIEG 199
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK-----YLTDLEKKISSKVGLNISIKHR 270
++V TE L+ + + K K KI K +N IK
Sbjct: 200 GLTVSQTERLISDYLSGKRNAKTTRVIKVSMNDCRVVYNTIKKALKIFQKTDINYDIKEN 259
Query: 271 N 271
Sbjct: 260 K 260
>gi|94501994|ref|ZP_01308501.1| chromosome partitioning protein ParB [Oceanobacter sp. RED65]
gi|94425870|gb|EAT10871.1| chromosome partitioning protein ParB [Oceanobacter sp. RED65]
Length = 296
Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 8/265 (3%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
+ PE I I P+P PR + G++ L +SIK +G QP+ V + + Y+I+
Sbjct: 32 QGKPEQILKIHHSKIEPDPLQPRRKIDEAGIKALSESIKLNGQAQPITVIPLGDDTYRIV 91
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR+RAAK+A L V + ++D I + ENV R+D+ + A Y +++
Sbjct: 92 AGERRWRAAKLADLEVVAYVRGDLDETQIRLIQVAENVDREDMTVEDTARAYVGIVNVLT 151
Query: 153 Y---TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
+ G S++ I + + I+ R+L A
Sbjct: 152 ESGLEKKKAIERAGISKTEFYRWQTINEAFEAEDSSIQIVSTVTADLRSLEEFRRLEKKA 211
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVG--LNISI 267
+ SK + ++L + + K + ++ ++E + VG + + I
Sbjct: 212 PDLSSKIIKKIQGDKLKGSLREEIDSLTKPKKKQEKQSPVSYEIEN--AELVGEEILVDI 269
Query: 268 KHRNN-KGQFCIKYETNEQLKIICS 291
K I + L +
Sbjct: 270 SKGGKAKSTLKIDKSSLALLNGLFE 294
>gi|269217855|ref|ZP_06161709.1| ParB family protein [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212790|gb|EEZ79130.1| ParB family protein [Actinomyces sp. oral taxon 848 str. F0332]
Length = 103
Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 39/93 (41%)
Query: 205 PLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
LAQ IVS+ +SVR EE+V D +R L +L +++ +
Sbjct: 1 MERLAQKIVSEGLSVRQVEEIVALGDEPTASPASGRRRARRYGPELGELSSRLADRFDTR 60
Query: 265 ISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
+ ++ KG I + + + L I +L +
Sbjct: 61 VKVEMGAKKGSIKIDFASIDDLNRILGVLSPGE 93
>gi|255690776|ref|ZP_05414451.1| putative partitioning protein [Bacteroides finegoldii DSM 17565]
gi|260623825|gb|EEX46696.1| putative partitioning protein [Bacteroides finegoldii DSM 17565]
Length = 587
Score = 72.4 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
K +++ ++ +++ ++ P+ +NPR F+ E L +L +SI+ G++QP+ VR +
Sbjct: 2 ETKSIQSVEKNITMVALANVQPSSYNPRKNFDGESLAELAESIRQQGVLQPIGVRPTEEN 61
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERRFRA+ MA L E+P I+ + ++ + E+A+ EN+QRKD+ P+EEA Y++L
Sbjct: 62 RFEIVFGERRFRASLMAGLEEIPAIVMEISDEQAEEMAVTENLQRKDVTPIEEANAYQRL 121
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + + GK+ S++ L+ + L + +++ ++EI++ A + + +
Sbjct: 122 LESGRHDVQSLAVQFGKNESYIRTRLKFVSLIPEIAQLLEQDEITISVASEICRYGEDIQ 181
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
K V+ N K + +++Y DL +
Sbjct: 182 REVYETHLKEGVQY---------NSWRGMKASEVAKKIEQQYTADLAR 220
>gi|238853719|ref|ZP_04644086.1| protein YyaA [Lactobacillus gasseri 202-4]
gi|238833655|gb|EEQ25925.1| protein YyaA [Lactobacillus gasseri 202-4]
Length = 293
Score = 72.0 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 89/299 (29%), Positives = 158/299 (52%), Gaps = 28/299 (9%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
+L G + I + I + I+PN + PR+ F E +E+L ++K G+
Sbjct: 4 SLFGNRQKKIPESK--------QVQEIELDKIMPNRYQPRHTFSDESIEELAATLKEQGL 55
Query: 76 IQPLIVRAI---DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+QP+I+R G Y+IIAGERRFRAA+ +++P I+ N+D++ + +A+VEN+QR
Sbjct: 56 LQPIILRKPADGPEGEYEIIAGERRFRAAQSLKWAKIPAIVENMDDEKAASLALVENLQR 115
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
++LNP++EA Y QL+ TQ ++ +GK++S++AN +R+LKL V+ + ++IS
Sbjct: 116 ENLNPIDEAQAYVQLMKVNNLTQTELAEQMGKTQSYIANKIRLLKLTPKVQGFLIDKKIS 175
Query: 193 LGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
H R L ++ D + I+ ++V++TEE+V++ D E +K+ E E+ K
Sbjct: 176 QRHGRALLALNEEDQDTAVSEIIKNGLTVKETEEMVKDLDGYLEAQKQAKEEELEENKPE 235
Query: 251 T----------DLEKKISSKVGL-NISIKHRNNKGQFCIKYETN---EQLKIICSLLGE 295
++ +IK + G +KY+ + + KI LL +
Sbjct: 236 KEKKPKKKVQVRTANDFKVQINTIKKAIKMAKDSG-MTVKYKEDKKGDSYKITIELLKK 293
>gi|154496091|ref|ZP_02034787.1| hypothetical protein BACCAP_00375 [Bacteroides capillosus ATCC
29799]
gi|150274646|gb|EDN01710.1| hypothetical protein BACCAP_00375 [Bacteroides capillosus ATCC
29799]
Length = 269
Score = 72.0 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 79/214 (36%), Positives = 121/214 (56%), Gaps = 4/214 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+ IVPNP PR YF EGLE+L +SI+ HG++Q + G Y++++GER
Sbjct: 13 NRVHFLPESLIVPNPDQPRKYFSQEGLEELAESIREHGVLQ-PLSVRKAGGGYELVSGER 71
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RA++MA L EVP II VD ++S +A+VEN+QR+DL+ +EEA +LI Y +Q
Sbjct: 72 RLRASRMAGLKEVPCIILRVDQENSSLLALVENLQRRDLDFVEEAAALSRLICTYNLSQE 131
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPLSLAQVIV 213
+ +GKS+S VAN LR+L+LP V +++ + + HAR L+ + AQ I
Sbjct: 132 EAARRIGKSQSAVANKLRLLRLPPQVLKLLLEAGCTERHARALLRLEDPELQMKAAQYIA 191
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+ ++V TE V+ + K+ K+
Sbjct: 192 QEHLTVARTEAYVESLLSPATPAKRRKPTYLIKD 225
>gi|301301110|ref|ZP_07207267.1| ParB-like protein [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851239|gb|EFK78966.1| ParB-like protein [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 229
Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 131/222 (59%), Gaps = 2/222 (0%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
EK + E + I + N PR F E + +L ++I+SHG++QP+IVR
Sbjct: 7 KSKKEEKVEDDTQEKVQELPIEQVEVNEDQPRQVFSEESIAELAETIQSHGLLQPIIVRP 66
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
I + Y+IIAGERR+RA K + ++P I++ +D K + +A++EN+QR+ L +EEA
Sbjct: 67 IGDNKYQIIAGERRYRAIKKLNWQKIPAIVKKMDEKEAASMAVIENLQREGLTAIEEAES 126
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--S 201
Y +L+ TQ ++ +GKS++ VAN LR+LKL V+ I + +IS H R++V
Sbjct: 127 YRKLMDLNQLTQLELARAIGKSQAFVANKLRLLKLSPLVQRAILQRKISERHGRSIVSLP 186
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ + + I+ KK+SV++TE++V + KK KR+ I +
Sbjct: 187 EKKQVEILKKIIDKKLSVKETEKIVAQLKIKKRKRRIIAKEQ 228
>gi|332971425|gb|EGK10383.1| stage 0 DNA-binding protein [Desmospora sp. 8437]
Length = 272
Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 120/233 (51%), Gaps = 1/233 (0%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ + + + I P+P+ PR+ F+ + L +LC++I++HG+IQP++VR I Y+
Sbjct: 14 AEKEEHDEVRQLEVGLIRPSPYQPRSIFDDDRLNELCETIRTHGVIQPVVVRRI-QDQYE 72
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
+IAGERR RA K + +P I+R + + + ++++EN+QR+ L LEEA Y QLI
Sbjct: 73 LIAGERRLRAVKKLGMERIPAIVREMSDMDAASVSLIENLQREGLTALEEAEAYHQLIEL 132
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQ 210
+ TQ + +GK +S VAN LR+L LP V++ I I+ HAR L+ + +
Sbjct: 133 HDLTQEGLAKRLGKGQSTVANKLRLLHLPREVQDAILDRSITERHARALLGLKEEELQLK 192
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
++ + ++ + E R + + + I V +
Sbjct: 193 LLNEILQKGLNVKQTEERVQRWTEMRNTPKPKRKSFSRDVRIAVNTIRQSVDM 245
>gi|326390372|ref|ZP_08211931.1| parB-like partition protein [Thermoanaerobacter ethanolicus JW 200]
gi|325993649|gb|EGD52082.1| parB-like partition protein [Thermoanaerobacter ethanolicus JW 200]
Length = 263
Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 140/213 (65%), Gaps = 3/213 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+ + I SI P+P+ PR F+ + L++L +SIK +G++QP+ VR + N Y+++AGER
Sbjct: 2 QEISYLPIDSIRPSPYQPRKTFDIKNLQELSESIKVYGVLQPITVRMVGNNSYELVAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R +A+K+A L+E+P II N ++ + +A++EN+QR+DLN +EEA GY LI+++ TQ
Sbjct: 62 RLKASKLAGLTEIPAIIVNAQDEDAAVLALIENLQREDLNFIEEAEGYYNLINDHHLTQE 121
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIV 213
+ ++GKS+S +AN LRILKL ++E + + +++ HAR L +VIV
Sbjct: 122 QLAKMLGKSQSTIANKLRILKLSKEIKEKLLENDLTERHARALLRLPDEELQKKALEVIV 181
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
KK++V TE+L+Q+ +K K+++ + + +K
Sbjct: 182 KKKLNVSQTEKLIQDMIDKITKQQEETKKANKK 214
>gi|169333908|ref|ZP_02861101.1| hypothetical protein ANASTE_00294 [Anaerofustis stercorihominis DSM
17244]
gi|169259473|gb|EDS73439.1| hypothetical protein ANASTE_00294 [Anaerofustis stercorihominis DSM
17244]
Length = 270
Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 73/214 (34%), Positives = 128/214 (59%), Gaps = 3/214 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ + I I N PR YF+ E +++L +SI+S GIIQP+ VR Y++++
Sbjct: 12 ANVKKVKELDISLISANKDQPRKYFDEESIKELSESIRSLGIIQPITVRQKGYNSYEVVS 71
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR RA+K+A L ++P II +++++ + IA++EN+QR++LN EEAL Y++++SEYG
Sbjct: 72 GERRLRASKLAGLDKIPCIIVSINSEENDLIALIENIQRENLNFYEEALSYKKIMSEYGM 131
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQ 210
+Q ++ S +GK +S ++N++R+L L V +I + ++ HAR L+S D A+
Sbjct: 132 SQEELASRIGKKQSTISNLVRLLNLDEEVLHIIIENNLTQRHARCLLSLPDSNMRLKAAK 191
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
I K ++V+++E LV+ +
Sbjct: 192 EIAKKDLNVKNSELLVERLKQEIVINSSKTNVKN 225
>gi|282852936|ref|ZP_06262277.1| ParB-like protein [Lactobacillus gasseri 224-1]
gi|282556044|gb|EFB61665.1| ParB-like protein [Lactobacillus gasseri 224-1]
Length = 270
Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 136/229 (59%), Gaps = 13/229 (5%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
+L G + I + I + I+PN + PR+ F E +E+L ++K G+
Sbjct: 4 SLFGNRQKKIPESK--------QVQEIELDKIMPNRYQPRHTFSDESIEELATTLKEQGL 55
Query: 76 IQPLIVRAI---DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+QP+I+R G Y+IIAGERRFRAA+ +++P I+ N+D++ + +A+VEN+QR
Sbjct: 56 LQPIILRKPADGPEGEYEIIAGERRFRAAQSLKWAKIPAIVENMDDEKAASLALVENLQR 115
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
++LNP++EA Y QL+ TQ ++ +GK++S++AN +R+LKL V+ + ++IS
Sbjct: 116 ENLNPIDEAQAYVQLMKVNNLTQTELADQMGKTQSYIANKIRLLKLTPKVQGFLIDKKIS 175
Query: 193 LGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
H R L ++ D + I+ ++V++TEE+V++ D E +K+
Sbjct: 176 QRHGRALLALNEEDQDTAVSEIIKNGLTVKETEEMVKDLDGYFEAQKQA 224
>gi|241888692|ref|ZP_04775999.1| nucleoid occlusion protein [Gemella haemolysans ATCC 10379]
gi|241864715|gb|EER69090.1| nucleoid occlusion protein [Gemella haemolysans ATCC 10379]
Length = 294
Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 73/257 (28%), Positives = 133/257 (51%), Gaps = 4/257 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
++ EK + + I + IVPN + PR F E +++L +SIK +G++Q
Sbjct: 8 FSKLYDLTQRAEKVGISDDDVLREILVEKIVPNKYQPRREFTEEKIKELAESIKQNGLLQ 67
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
+ VR + NG Y++IAGERR RA K S I++ + ++ +A++EN+QR++L P
Sbjct: 68 SITVRDMGNGFYELIAGERRLRAIKYLQYSTTKAIVKELTDEQMATLALIENIQREELTP 127
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EEA Y++L+ TQ+++ +GK+++ VAN LR+LKL V + I ++I+ H R
Sbjct: 128 IEEAHAYQELLRINKLTQDELAKSLGKTQATVANKLRLLKLSKKVIDAINTKKITERHGR 187
Query: 198 TLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
+V Q++ + E++ KK+ + + + +K + L
Sbjct: 188 AMVKLDSSAQEKLLIQILSQNLNVSQTEEKIDTYLKIKKDTKVFNPTVNYDGQKIIAKLI 247
Query: 255 KKISSKVGLNISIKHRN 271
K+I+ K+ +I
Sbjct: 248 KEIA-KLEEKYNINLNK 263
>gi|282852933|ref|ZP_06262274.1| stage 0 sporulation protein J family protein [Lactobacillus gasseri
224-1]
gi|282556041|gb|EFB61662.1| stage 0 sporulation protein J family protein [Lactobacillus gasseri
224-1]
Length = 179
Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 1/176 (0%)
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+E+A++EN+QR+DL PLEEA YE L G TQ ++ +GKSR ++AN LR+L LP
Sbjct: 1 MEVAVLENLQREDLTPLEEAQAYEMLQKNLGLTQAEVSKRLGKSRPYIANYLRLLTLPQK 60
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ ++++ E+S+G ARTL+ D + + + +L EK KK +
Sbjct: 61 TKRLLQRGELSMGQARTLLGLKDKDGIDDLAKKVVKNGITVRQLESLVAKLNEKEKKPKK 120
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGEN 296
+ +K ++ E +++ K G +++I + G I + + ++L I LLG N
Sbjct: 121 KAIKKSAFIRASESQLTDKFGTSVNITESKKGNGHLAIDFASTDELNRILDLLGIN 176
>gi|253573866|ref|ZP_04851208.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846343|gb|EES74349.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 279
Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 66/168 (39%), Positives = 108/168 (64%), Gaps = 1/168 (0%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
+ I + IV +P+ PR F+ E +++LCQ+I++HG+IQP++VR N Y+I
Sbjct: 18 ERNSGDEVRQIPVGEIVGSPYQPRTIFDDEKIDELCQTIRTHGVIQPIVVRYR-NEKYEI 76
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
IAGERR+RA K L +P I+R+ ++ + IA++EN+QR+ L +EEA+ Y+ LI +
Sbjct: 77 IAGERRWRAVKKLGLESIPAILRDFNDSQAASIALIENLQREGLTSIEEAMAYQNLIDLH 136
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
TQ + +GKS+S +AN +R+L+LP V+ + + +I+ HAR L
Sbjct: 137 QLTQESLAQRLGKSQSTIANKIRLLQLPDEVKNALMERKITERHARAL 184
>gi|257437748|ref|ZP_05613503.1| protein YyaA [Faecalibacterium prausnitzii A2-165]
gi|257199763|gb|EEU98047.1| protein YyaA [Faecalibacterium prausnitzii A2-165]
Length = 264
Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 120/223 (53%), Gaps = 3/223 (1%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
+ + + SI P+P R F+ + L L QSI+ +G++QP+ VR ++ G Y+++
Sbjct: 5 KKSAGKIYTLPVESIRPSPFQARTVFDEKELAGLAQSIRENGLLQPISVRKVEGG-YELV 63
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR RA K+A + +P I+ + ++ + + ++EN+QR+DLNP E+A G +I+ +
Sbjct: 64 AGERRLRACKLARMETIPAILCDCGDQRTAALGLLENIQREDLNPFEQAQGLRDVIALWD 123
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQ 210
TQ + +G ++ +AN LR+L+L + R+ + ++ HAR + + +
Sbjct: 124 CTQAEAAKRLGMAQPTLANKLRLLQLTTDQRQFVLDNGLTERHARAVLRLPENRRSEALI 183
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
I ++M+ R T+ +++ N + ++ ++ +
Sbjct: 184 TIAKRRMNARQTDLYIEQVLNAAAPGRHRISMVKDVRIFVNTI 226
>gi|126701301|ref|YP_001090198.1| putative stage 0 sporulation protein [Clostridium difficile 630]
gi|254977334|ref|ZP_05273806.1| putative stage 0 sporulation protein [Clostridium difficile
QCD-66c26]
gi|255094665|ref|ZP_05324143.1| putative stage 0 sporulation protein [Clostridium difficile CIP
107932]
gi|255102891|ref|ZP_05331868.1| putative stage 0 sporulation protein [Clostridium difficile
QCD-63q42]
gi|255308711|ref|ZP_05352882.1| putative stage 0 sporulation protein [Clostridium difficile ATCC
43255]
gi|255316418|ref|ZP_05358001.1| putative stage 0 sporulation protein [Clostridium difficile
QCD-76w55]
gi|255519078|ref|ZP_05386754.1| putative stage 0 sporulation protein [Clostridium difficile
QCD-97b34]
gi|255652261|ref|ZP_05399163.1| putative stage 0 sporulation protein [Clostridium difficile
QCD-37x79]
gi|260685215|ref|YP_003216500.1| putative stage 0 sporulation protein [Clostridium difficile CD196]
gi|260688874|ref|YP_003220008.1| putative stage 0 sporulation protein [Clostridium difficile R20291]
gi|306521976|ref|ZP_07408323.1| putative stage 0 sporulation protein [Clostridium difficile
QCD-32g58]
gi|115252738|emb|CAJ70582.1| putative stage 0 sporulation protein,DNA-binding protein Spo0J-like
[Clostridium difficile]
gi|260211378|emb|CBA67030.1| putative stage 0 sporulation protein [Clostridium difficile CD196]
gi|260214891|emb|CBE07694.1| putative stage 0 sporulation protein [Clostridium difficile R20291]
Length = 261
Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 86/214 (40%), Positives = 136/214 (63%), Gaps = 4/214 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ I I +VPNP+ PR F LE+L SIK +GIIQP+ VRA D Y++IAGE
Sbjct: 3 DKRVMEIPIEDVVPNPYQPRKIFSQVSLEELSNSIKVYGIIQPITVRAKDGK-YELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK+A L +P II N++++SS +A++EN+QR+DLN +EEA+GYE LI E+ +TQ
Sbjct: 62 RRLRAAKLAELKTIPAIINNMNDESSAVLALLENLQREDLNFIEEAIGYENLIKEHAFTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVI 212
+ +GK++S VAN LRILKLP+ ++ + + ++ HAR S S+ +
Sbjct: 122 QQLAEKLGKNQSTVANKLRILKLPNDIKMKLIENNLTERHARAFLKLPSEDLMQSVLDKV 181
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ +++V+ TE+L+Q+ + + +++ + K
Sbjct: 182 IKNELTVKKTEKLIQDVLEETKVQEEPDKKQNIK 215
>gi|261410102|ref|YP_003246343.1| parB-like partition protein [Paenibacillus sp. Y412MC10]
gi|329925010|ref|ZP_08279954.1| nucleoid occlusion protein [Paenibacillus sp. HGF5]
gi|261286565|gb|ACX68536.1| parB-like partition protein [Paenibacillus sp. Y412MC10]
gi|328940129|gb|EGG36461.1| nucleoid occlusion protein [Paenibacillus sp. HGF5]
Length = 272
Score = 71.6 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 127/234 (54%), Gaps = 1/234 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ I ++ +V +P+ PR F+ E +++L Q+IK+HG+IQP++VR NG+Y
Sbjct: 12 AAERNQGDEVKQIPVNEVVSSPYQPRTIFDDEKIDELLQTIKTHGVIQPIVVRVR-NGVY 70
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAGERR+RA K L +P I+R ++ + IA++EN+QR+ L +EEA+ Y++LI
Sbjct: 71 EIIAGERRWRAVKKLGLDTIPAIVREFNDSQAASIALIENLQREGLTSIEEAVAYQKLID 130
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
+ TQ + +GKS+S +AN +R+L+LP + + + + +++ HAR L+S + +
Sbjct: 131 LHQLTQESLAQRLGKSQSTIANKIRLLQLPEAAKVALMERKVTERHARALLSLDNEETQL 190
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
+V+ + ++ KE K + I + +
Sbjct: 191 KVLDEIITKELNVKQTEARIAFYKEVTTMKKAKRISYSKDVRLALNTIRQSIDM 244
>gi|225181154|ref|ZP_03734600.1| parB-like partition protein [Dethiobacter alkaliphilus AHT 1]
gi|225168123|gb|EEG76928.1| parB-like partition protein [Dethiobacter alkaliphilus AHT 1]
Length = 299
Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 78/224 (34%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
++T+ E I+I +I PNP+ PR E E + +L QSIK++G++QP+I R Y
Sbjct: 12 EETQFDQEQIQYIAIANIRPNPYQPRKNIEEEKIYELAQSIKTYGLLQPVIARK-SATGY 70
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+++AG RR A K +EVP I+R + N + +A++EN+QR++L+ LEEA GYE LI
Sbjct: 71 ELVAGHRRLLACKKLGWAEVPAIVRELSNSAMATVALIENLQRENLSFLEEAQGYESLIR 130
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
E+ TQ + +GKS+S +AN LRILKLP V+E ++ +E++ HAR L+
Sbjct: 131 EFKLTQEVLAQRLGKSQSTIANKLRILKLPREVKEKLQIQELTERHARALLKLPGEEDQL 190
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
I+ + ++R T + +++ + K+ + D+
Sbjct: 191 -KILQEVCNLRYTVQQTEKRVADYLSNLEPTAVKERKKVIIRDI 233
>gi|62001781|gb|AAX58608.1| unknown [Pseudomonas syringae]
Length = 94
Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
+ A+ +V++ ++VR TE LV++ + K + + + + LE++++ +
Sbjct: 4 DENRQEEGARHVVARGLTVRQTEALVRQWLSDKPDPVEPSKP----DPDIARLEQRLAER 59
Query: 261 VGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL 293
+G + I+H N KGQ I+Y + ++L+ + + +
Sbjct: 60 LGSAVQIRHGNKGKGQLVIRYNSLDELQGVLAHI 93
>gi|255657630|ref|ZP_05403039.1| putative stage 0 sporulation protein [Clostridium difficile
QCD-23m63]
gi|296452689|ref|ZP_06894380.1| chromosome partitioning protein SpoOJ [Clostridium difficile NAP08]
gi|296880059|ref|ZP_06904028.1| chromosome partitioning protein SpoOJ [Clostridium difficile NAP07]
gi|296258471|gb|EFH05375.1| chromosome partitioning protein SpoOJ [Clostridium difficile NAP08]
gi|296428926|gb|EFH14804.1| chromosome partitioning protein SpoOJ [Clostridium difficile NAP07]
Length = 261
Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 86/214 (40%), Positives = 136/214 (63%), Gaps = 4/214 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ I I +VPNP+ PR F LE+L SIK +GIIQP+ VRA D Y++IAGE
Sbjct: 3 DKRVMEIPIEDVVPNPYQPRKIFSQVSLEELSNSIKVYGIIQPITVRAKDGK-YELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK+A L +P II N++++SS +A++EN+QR+DLN +EEA+GYE LI E+ +TQ
Sbjct: 62 RRLRAAKLAELKTIPAIINNMNDESSAVLALLENLQREDLNFIEEAIGYENLIKEHAFTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVI 212
+ +GK++S VAN LRILKLP+ ++ + + ++ HAR S S+ +
Sbjct: 122 QQLAEKLGKNQSTVANKLRILKLPNDIKMKLIENNLTERHARAFLKLPSEDLMQSVLDKV 181
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ +++V+ TE+L+Q+ + + +++ + K
Sbjct: 182 IKNELTVKKTEKLIQDVLEETKIQEEPDKKQNIK 215
>gi|332654796|ref|ZP_08420538.1| ParB family protein [Ruminococcaceae bacterium D16]
gi|332516139|gb|EGJ45747.1| ParB family protein [Ruminococcaceae bacterium D16]
Length = 266
Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 79/213 (37%), Positives = 116/213 (54%), Gaps = 4/213 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + I PNP PR F LE+L +SI++ G++QPL VR + G +++AGE
Sbjct: 4 STRVLFLPVDDIFPNPDQPRRVFAQGDLEELARSIQALGLLQPLTVRRTEGGW-ELVAGE 62
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK+A L EVP + +D++ S +A+VEN+QRKDL+ EE+L ++LIS Y +Q
Sbjct: 63 RRLRAAKLAGLREVPCLSLQIDSQRSSLLALVENLQRKDLDFWEESLALDKLISTYHLSQ 122
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRK---EEISLGHARTLVSTSDPLSLAQVI 212
+ +GKS+S VAN LR+LKLP V E++R E L L AQ +
Sbjct: 123 EEAARRIGKSQSAVANKLRLLKLPREVLEILRDGGATERHARALLCLEDAQLQLQAAQTV 182
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
V + ++V TE L + + R
Sbjct: 183 VEQHLTVAQTEALTETLLLPPPPDQPARRPRRT 215
>gi|91782728|ref|YP_557934.1| ParB family protein [Burkholderia xenovorans LB400]
gi|91686682|gb|ABE29882.1| ParB family protein [Burkholderia xenovorans LB400]
Length = 668
Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 94/234 (40%), Gaps = 2/234 (0%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + + + I SI +P NPR F ++ S+ HG++Q
Sbjct: 61 LPPHRAPLTDTTAMSTQSNSTVAQLPIESIRRSPTNPRKRFVEAHHLEMTASVMKHGVLQ 120
Query: 78 PLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
P++VR ++++AGERR RAA+ A L E+P ++R++ + L I I+EN+QRKD+
Sbjct: 121 PVLVRPWPEEPGLFELVAGERRHRAAEAAQLVELPALVRDLTDDEVLHIQIIENLQRKDV 180
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+PLEEA GY+ L + + + + S + +
Sbjct: 181 HPLEEADGYKVLQERGHSVEQIAEEVSQTRSYVAQRLKLTSLIDSVRELFFDGKLTAATA 240
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
++ A ++ + L ++ + + + K
Sbjct: 241 LLIARLPAELQDKAAKEITAPWVDGEPRPLKTAAEHIQRNYMLRLDQAPFKTSD 294
>gi|298383569|ref|ZP_06993130.1| partitioning protein [Bacteroides sp. 1_1_14]
gi|298263173|gb|EFI06036.1| partitioning protein [Bacteroides sp. 1_1_14]
Length = 577
Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/193 (26%), Positives = 107/193 (55%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+ + ++ +++ I P+ +NPR F+ L +L +SI+ G++QP+ VR I +
Sbjct: 4 ATTAVQAVEKNITSVALADIQPSSYNPRKNFDETSLAELAESIRQQGVLQPIGVRPIADN 63
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L+E+P + + ++++ E+AI EN+ RKD+ P+EEA Y++L
Sbjct: 64 RFEIVFGERRYRASLMAELAEIPATVMEISDETAEEMAITENLHRKDVTPIEEANAYQKL 123
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I + + GK+ +++ L+ + L + ++ ++EI++ A + + +
Sbjct: 124 IDSGRHDVQSLTVQFGKTEAYIRTRLKFVSLIPEIAVLLEQDEITISVASEICRYGEEIQ 183
Query: 208 LAQVIVSKKMSVR 220
K V+
Sbjct: 184 REVYDQHLKEGVQ 196
>gi|312876172|ref|ZP_07736159.1| parB-like partition protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796987|gb|EFR13329.1| parB-like partition protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 280
Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 132/241 (54%), Gaps = 9/241 (3%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ + I ++PNP+ PRN F+ +E+L SIK++G++QP+IVR Y +IAGERR
Sbjct: 21 IEDVPIEKVLPNPYQPRNNFDERLIEELATSIKTYGLLQPIIVRKKGEL-YYLIAGERRL 79
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA K ++ I+ NV + S +A++EN+QR+DL+ EEA GY+QL ++G TQ +I
Sbjct: 80 RACKHLGYCKIKAIVINVTDIESAILALIENIQRQDLDFFEEAQGYKQLADKFGLTQVEI 139
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS---TSDPLSLAQVIVSK 215
VGK++S +AN +R+L+LP+ +R MIR+ +S HAR L+ D + I+
Sbjct: 140 AKRVGKTQSAIANKIRLLQLPAEIRWMIREHGLSERHARALLKLESQEDMKYILSRIIEG 199
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK-----YLTDLEKKISSKVGLNISIKHR 270
++V TE L+ + + K K KI K +N +IK
Sbjct: 200 GLTVSQTERLISDYLSGKRNAKTTRVIKVSMNDCRVVYNTIKKALKIFQKTDINYNIKEN 259
Query: 271 N 271
Sbjct: 260 K 260
>gi|325297583|ref|YP_004257500.1| parB-like partition protein [Bacteroides salanitronis DSM 18170]
gi|324317136|gb|ADY35027.1| parB-like partition protein [Bacteroides salanitronis DSM 18170]
Length = 576
Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 98/175 (56%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+++ ++ +++ I P+ +NPR F+ L +L SI+ G++QP+ VR I
Sbjct: 2 EATNMKSVEKNIASVALADIQPSNYNPRKTFDEASLAELADSIRQQGVLQPIGVRPIGEN 61
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++++ GERR+RA+ MA L VP +I V ++ + E+A+ EN+QRKD+ P+EEA Y++L
Sbjct: 62 RFEVVFGERRYRASLMAGLETVPAVIYEVSDEVAEEMAVTENLQRKDVTPIEEANAYQKL 121
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVST 202
I + + + GKS ++ L+ L + ++ +EI++ A +
Sbjct: 122 IESGRHDVHSLAVQFGKSEDYIRTRLKFTTLIPEIAALLETDEITISVASEICRY 176
>gi|300362900|ref|ZP_07059070.1| stage 0 DNA-binding protein [Lactobacillus gasseri JV-V03]
gi|300352950|gb|EFJ68828.1| stage 0 DNA-binding protein [Lactobacillus gasseri JV-V03]
Length = 293
Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 89/299 (29%), Positives = 160/299 (53%), Gaps = 28/299 (9%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
+L G + I + I + I+PN + PR+ F E +E+L ++K G+
Sbjct: 4 SLFGNRQKKIPESK--------QVQEIELDKIMPNRYQPRHTFSDESIEELAATLKEQGL 55
Query: 76 IQPLIVRAI---DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+QP+I+R G Y+IIAGERRFRAA+ +++P I+ N+D++ + +A+VEN+QR
Sbjct: 56 LQPIILRKPADGPEGEYEIIAGERRFRAAQSLKWAKIPAIVENMDDEKAASLALVENLQR 115
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
++LNP++EA Y QL+ TQ ++ +GK++S++AN +R+LKL V+ + ++IS
Sbjct: 116 ENLNPIDEAQAYVQLMKVNNLTQTELAEQMGKTQSYIANKIRLLKLTPKVQGFLIDKKIS 175
Query: 193 LGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
H R L ++ D + I+ ++V++TEE+V++ D E +K+ E E+ K
Sbjct: 176 QRHGRALLALNEEDQDTAVSEIIKNGLTVKETEEMVKDLDGYLEAQKQAKEEELEENKPE 235
Query: 251 TDLE----------KKISSKVGL-NISIKHRNNKGQFCIKYETN---EQLKIICSLLGE 295
+ + ++ +IK + G +KY+ + + KI LL +
Sbjct: 236 KENKPKKKVQVRTTNDFKVQINTIKKAIKMAKDSG-MTVKYKEDKKGDSYKITIELLKK 293
>gi|23100943|ref|NP_694410.1| hypothetical protein OB3488 [Oceanobacillus iheyensis HTE831]
gi|81744943|sp|Q8EKU5|NOC_OCEIH RecName: Full=Nucleoid occlusion protein; Short=Noc
gi|22779178|dbj|BAC15444.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 286
Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/250 (28%), Positives = 134/250 (53%), Gaps = 5/250 (2%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
I + + + E + I + +I PN + PR F+ E +++L Q+I +HG+IQ
Sbjct: 8 IFGKSDKENIDTDEVEYSTDEVIQIKVDNIHPNRYQPRTIFQEEKIKELAQTIHTHGMIQ 67
Query: 78 PLIVRA-IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
P++VR D Y++IAGERR+RA + +V IIR++ + + +A++EN+QR++L
Sbjct: 68 PIVVRKLEDEDTYELIAGERRWRAVQHLGWEQVSAIIRDMTDTETASVALIENLQREELT 127
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISL 193
+EEA+ Y +L+ + TQ + +GK++S VAN LR+LKLP V+ + + E
Sbjct: 128 VIEEAIAYSKLLELHSLTQEALAQRLGKNQSTVANKLRLLKLPEEVQTALLDKAISERHA 187
Query: 194 GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
L +++ I+ K ++V+ TE+ + + N+ +++KK + K +
Sbjct: 188 RALIKLKQEDQQIAVLHEILEKGLNVKQTEDRIAQI-NEPKEKKKPKPKFKGVNKDIRIA 246
Query: 254 EKKISSKVGL 263
I + +
Sbjct: 247 MNTIRQSLNM 256
>gi|227534573|ref|ZP_03964622.1| stage 0 DNA-binding protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187822|gb|EEI67889.1| stage 0 DNA-binding protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 254
Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 2/201 (0%)
Query: 47 IVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL 106
IVPN PR F E + +L +IK HG++QP+IVR Y+IIAGERR+RA +
Sbjct: 4 IVPNQFQPRKVFTPESIRELATTIKDHGLLQPIIVREYKPEKYEIIAGERRYRAMQTLGW 63
Query: 107 SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSR 166
+ P I++ +D+ S +A+VEN+QR+ L+ +EE Y L+ TQ + +GKS+
Sbjct: 64 EKAPAIVQKMDDDESASMALVENLQREGLSAIEEGQAYVALMKLNHLTQAALAEQLGKSQ 123
Query: 167 SHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA--QVIVSKKMSVRDTEE 224
+ VAN +R+LKL V+E + K IS H R L+ + +A I + ++V++T
Sbjct: 124 AFVANKIRLLKLSEPVQEALMKSRISERHGRELLKLDEKQQVAALHQIFADDLTVKETSA 183
Query: 225 LVQEQDNKKEKRKKIFEGSRE 245
L+ E K+ K R
Sbjct: 184 LINEMLRPKKPTPKPKPKVRR 204
>gi|320527145|ref|ZP_08028332.1| ParB-like partition protein [Solobacterium moorei F0204]
gi|320132473|gb|EFW25016.1| ParB-like partition protein [Solobacterium moorei F0204]
Length = 269
Score = 70.9 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 134/242 (55%), Gaps = 8/242 (3%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
I + IVP+ + PR F+ E L +L SIK +G+IQP+ VR ID +Y+II
Sbjct: 10 RKDTNRIVDIPMEKIVPSRYQPRLVFDEEALRELALSIKENGLIQPITVRKID-DIYEII 68
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
GERRFRA KM EVP I + + + ++A+VEN+QR++L +EEA Y Q++ + G
Sbjct: 69 TGERRFRACKMIGFKEVPCYIMSPNENQAAQMALVENIQRENLTAIEEAKSYLQIMRQSG 128
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQ 210
TQ + VGKS+S VAN +R+L LP +++ + + +I+ HAR L V + +
Sbjct: 129 LTQEQVAQKVGKSQSAVANKIRLLNLPIEIQDAVMETKITERHARALLTVPSDKQKEVFH 188
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIF-----EGSREKEKYLTDLEKKISSKVGLNI 265
IV+ + +VR TE+ + D+ +K+ K S + + K+ +K+G+
Sbjct: 189 HIVAAEFNVRQTEDYIASLDDIPKKKHKHQKTKGFSRSTQIAVNTINQSIKLINKMGIQA 248
Query: 266 SI 267
+
Sbjct: 249 KV 250
>gi|38638036|ref|NP_943010.1| putative partitioning protein [Ralstonia eutropha H16]
gi|32527374|gb|AAP86124.1| putative partitioning protein [Ralstonia eutropha H16]
Length = 328
Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI----VRAIDNGLY 89
+ + + I PNP PR F+ L +L +SIK G++QP++ +
Sbjct: 53 ESQGAASTVPVEKIRPNPWQPRIKFDESSLTELAESIKELGLMQPILVRRVTPDNGESYF 112
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
++IAGERR+RA ++ L E+ +I + + +A+ ENV R+DL E +
Sbjct: 113 ELIAGERRWRAHQVLGLQEIKALITDASDADMAVLALAENVSREDLTDYEIGKAMRRAEK 172
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
E+ + + +G SRS + LP +R
Sbjct: 173 EFP-DRKRMAESMGMSRSTLYRYFAFDNLPEFMR 205
>gi|291558325|emb|CBL35442.1| ParB-like partition proteins [Eubacterium siraeum V10Sc8a]
Length = 263
Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 141/270 (52%), Gaps = 21/270 (7%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K + I +++ I NP+ PR YF+ LE L SIK +G++QPL VR +G Y
Sbjct: 5 TKEKKITGQVFTVNVREIDLNPNQPRKYFDKAELESLAISIKENGLLQPLTVRKKSDGRY 64
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
++IAGERR RA+ +A ++EV VII + + + S +AI+EN+QR DLN +EEA+ ++L++
Sbjct: 65 ELIAGERRLRASILAGINEVRVIIEDRNEEESSVLAIIENIQRCDLNCIEEAVAMQRLMN 124
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
YGYTQ ++ +GK++S +AN +R+LKL + + ++ R L+ +
Sbjct: 125 HYGYTQEELARKLGKAQSTIANKIRLLKLSDKLLANALEHDLCERQIRALIRLPEEQREK 184
Query: 210 QVIVSKKM--SVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
K +V +TE+ + + K+K K K Y+ ++ + + +
Sbjct: 185 AEKHIYKYGLNVSETEKYIDKLL-VKKKADKPKWTFTAKRLYINNINRTLETM------- 236
Query: 268 KHRNNKGQFCIKYETN--EQ---LKIICSL 292
G I++ + E+ L+ I +
Sbjct: 237 ---KKSG---IEFISEKHEENGYLEYIIRI 260
>gi|257458478|ref|ZP_05623615.1| stage 0 sporulation protein J [Treponema vincentii ATCC 35580]
gi|257444075|gb|EEV19181.1| stage 0 sporulation protein J [Treponema vincentii ATCC 35580]
Length = 213
Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 55/116 (47%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ T + + + PNP+ PR F E L++L SIK HGIIQP+I D Y
Sbjct: 98 TQEPTAGSAPVELDPALLKPNPYQPRRTFNEESLQELAASIKEHGIIQPIIA-EKDGENY 156
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
IIAGERR RAA +A L+ VPVI R +N LEIA++EN+QR++LNP+EEA Y+
Sbjct: 157 YIIAGERRTRAALLAGLTRVPVIFREFENSKKLEIALIENIQRENLNPIEEAKAYQ 212
>gi|167770824|ref|ZP_02442877.1| hypothetical protein ANACOL_02177 [Anaerotruncus colihominis DSM
17241]
gi|167666864|gb|EDS10994.1| hypothetical protein ANACOL_02177 [Anaerotruncus colihominis DSM
17241]
Length = 278
Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 66/217 (30%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ I + IV +P+ PR FE +++L SI G++QP+ VRA+ +G Y+
Sbjct: 4 SKQRTVNRVVLIDVDRIVRSPYQPRRQFEPRAMQELADSIAQSGLLQPVTVRAVGSG-YE 62
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
+IAGERR A +M + ++P I+ DN+ S A++EN+QRKDLN EEA G +L+
Sbjct: 63 LIAGERRLMACRMNGIDKIPAIVEQFDNEKSAVFALIENLQRKDLNYFEEAQGIRRLMEL 122
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL-- 208
TQ + +GK++S +AN LR+L +R + ++ HAR L+ +
Sbjct: 123 CDMTQQQVAKRLGKAQSTIANKLRLLNFSEELRRRMLDAGLTERHARALLKLESDQQIEA 182
Query: 209 -AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ I ++++V +TE L++ + + +
Sbjct: 183 ALETITHERLNVGETERLIETMLTAAPEPAPVKPEQK 219
>gi|160932438|ref|ZP_02079828.1| hypothetical protein CLOLEP_01273 [Clostridium leptum DSM 753]
gi|156868397|gb|EDO61769.1| hypothetical protein CLOLEP_01273 [Clostridium leptum DSM 753]
Length = 273
Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 4/222 (1%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
I + I P PR F +E L +L +SI+ +G++QPL VR +++I
Sbjct: 5 SKEENRVRQIPLVQICPGKAQPRKNFSNEELLELARSIQENGVLQPLTVRKAGLAGFELI 64
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR RAA +A +VP ++ + D++ + +++EN+QR DL+P EEA G E+LI E+
Sbjct: 65 AGERRLRAAALAGSEKVPCLVIDCDDQQAAIYSLLENLQRVDLDPFEEAEGIEKLIQEWH 124
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK---EEISLGHARTLVSTSDPLSLA 209
TQ + +GK +S +AN LR+L+L RE I++ E L
Sbjct: 125 ITQEEAAKRLGKKQSTIANKLRLLRLAPEEREAIQRAGLTERHARAVLKLKDGGLRSIAL 184
Query: 210 QVIVSKKMSVRDTEELVQEQD-NKKEKRKKIFEGSREKEKYL 250
+ ++ + ++V+ TE+ V+ +E+ +K K+ +
Sbjct: 185 RHMIERGLNVKQTEDFVERLLEKNREQERKSHRRIIIKDVRI 226
>gi|257454162|ref|ZP_05619433.1| ParB family protein [Enhydrobacter aerosaccus SK60]
gi|257448423|gb|EEV23395.1| ParB family protein [Enhydrobacter aerosaccus SK60]
Length = 308
Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 55/307 (17%), Positives = 109/307 (35%), Gaps = 35/307 (11%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTET-----IPESQDCISIHSIVPNPHNPR 55
MS + L+ + ++ + + + I NP PR
Sbjct: 1 MSKDIK---------TLLAQKLADNNARHANANQSTYLDVGNELKRLPLDKIKSNPFQPR 51
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
F+ + +L +SIK G++QP+ VR G Y++IAGERRF+A ++ + + I+
Sbjct: 52 TVFDETEIANLAESIKEMGLLQPITVRETGLGDYELIAGERRFKAHELLGKTHIDAIVSR 111
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+ +A+ EN R+DL E A + + ++ + VG R + L
Sbjct: 112 ASDSEIAILALAENASREDLCDYEIAQALRNIEKHFP-NKSRLAEAVGLDRKEMYRYLAY 170
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
LP+S + + + L + + EL++ ++ +
Sbjct: 171 HDLPTSFLDKVATKPKLLSRSAAYDIKQVLNQFKFSEQQTDEVLSRVWELLELGKLEQGR 230
Query: 236 RKKIFEGSREKE------------KYLTDLEKKIS--SKVGLNISIKHRNNKGQFCIKYE 281
+ + KE + + +S +G H+ K I +
Sbjct: 231 IAEFIQSESLKELKSQIYCPPVAAPDIKPI---LSGGKPIG---KFHHKGKKYVVEINAK 284
Query: 282 TNEQLKI 288
+Q +
Sbjct: 285 DLDQQQR 291
>gi|146319847|ref|YP_001199559.1| transcriptional regulator [Streptococcus suis 05ZYH33]
gi|145690653|gb|ABP91159.1| Predicted transcriptional regulator [Streptococcus suis 05ZYH33]
Length = 188
Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/171 (42%), Positives = 116/171 (67%), Gaps = 1/171 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E ++I I PNP+ PR +F+ + L +L QSIK +G+IQP+IVR Y+++AGER
Sbjct: 2 EELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RA+++A L+ +P +++ + + L AI+EN+QR +LNP+EEA Y++LIS T +
Sbjct: 62 RLRASQLAGLTTIPAVVKELTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
++ I+GKSR +++N+LR+L L S ++ + + +IS GHAR LVS S+
Sbjct: 121 EVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHARQLVSFSEEKQ 171
>gi|163791211|ref|ZP_02185628.1| Chromosome partitioning protein, DNA-binding exonuclease
[Carnobacterium sp. AT7]
gi|159873542|gb|EDP67629.1| Chromosome partitioning protein, DNA-binding exonuclease
[Carnobacterium sp. AT7]
Length = 287
Score = 70.1 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 79/255 (30%), Positives = 140/255 (54%), Gaps = 11/255 (4%)
Query: 14 LAALIGE---VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
L+ L G ++ + P+ I++ IVPN PR F E L++L ++I
Sbjct: 3 LSDLFGSGKSKKKNEEELLLTELKSPKQVQQIAVQQIVPNRFQPRKVFNEEKLDELARTI 62
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
HG+IQP+I+R + Y+IIAGERRFRA ++ EVP I++ + + + +A++EN+
Sbjct: 63 HIHGLIQPIILRKYEEDKYEIIAGERRFRAMQLLEWQEVPAIVQEMTDNETASVALIENL 122
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
QR++L +EEA Y+ L++ TQ + +GKS+S +AN LR+LKL +++ + E
Sbjct: 123 QREELTAIEEAEAYQGLMALNELTQEALAQRIGKSQSFIANKLRLLKLAEPIKQALLNRE 182
Query: 191 ISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
++ H R+L +S + L +I KK++V++TE LV+ + + + S + +K
Sbjct: 183 VTERHGRSLLALSAEEQNELLTLIREKKLTVKETERLVKLKQ------VEKDKASDQPKK 236
Query: 249 YLTDLEKKISSKVGL 263
+ + K +
Sbjct: 237 RIKRISKDFRLALNT 251
>gi|319644058|ref|ZP_07998617.1| hypothetical protein HMPREF9011_04220 [Bacteroides sp. 3_1_40A]
gi|317384406|gb|EFV65374.1| hypothetical protein HMPREF9011_04220 [Bacteroides sp. 3_1_40A]
Length = 578
Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 109/194 (56%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + ++ +++ +I P+ +NPR F+ L +L +SI+ G++QP+ VR I +
Sbjct: 4 ATTAAAQAVEKNITSVALANIQPSNYNPRKNFDETSLAELAESIRQQGVLQPIGVRPIAD 63
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
++I+ GERR+RA+ MA L+E+P + + ++++ E+AI EN+ RKD+ P+EEA Y++
Sbjct: 64 NRFEIVFGERRYRASLMAELTEIPATVMEISDETAEEMAITENLHRKDVTPIEEANAYQK 123
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
LI + + GK+ +++ L+ + L + ++ ++EI++ A + + +
Sbjct: 124 LIDSGRHDVQSLTVQFGKTEAYIRTRLKFVSLIPEIALLLEQDEITISVASEICRYGEEI 183
Query: 207 SLAQVIVSKKMSVR 220
K V+
Sbjct: 184 QREVYDQHLKEGVQ 197
>gi|261856260|ref|YP_003263543.1| parB-like partition protein [Halothiobacillus neapolitanus c2]
gi|261836729|gb|ACX96496.1| parB-like partition protein [Halothiobacillus neapolitanus c2]
Length = 345
Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 3/234 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+GE + E I I I +P PR F+ E LE+L SI+ ++Q
Sbjct: 8 LGEAMMDGADSTASSGVNYEGIQRIDIDLIKSDPEQPRRLFDEEKLENLAASIRQMDLLQ 67
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P++VR + GL ++ GERR+RAAKMA L +VPV+ L +V N R++L
Sbjct: 68 PILVRE-EAGLIIMVDGERRWRAAKMAGLKDVPVVFSKQAQARVLLAQVVANENRENLMD 126
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR--EMIRKEEISLGH 195
+E A L EY T ++G ++ ++ + ++ ++ ++K P ++ E
Sbjct: 127 IELAKVINTLKREYKITGRELGKLLNRNDAQISRLMLLVKNPEILQLAEEGIITSAEHAA 186
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
+ + L + ++ + Q + + E +
Sbjct: 187 LFSALDPDTQAELVAQAKDNQTALTHQDLTAQREKPQTAAPTVNERPMDEPDAD 240
>gi|309803365|ref|ZP_07697460.1| nucleoid occlusion protein [Lactobacillus iners LactinV 11V1-d]
gi|312872135|ref|ZP_07732210.1| nucleoid occlusion protein [Lactobacillus iners LEAF 2062A-h1]
gi|312873453|ref|ZP_07733503.1| nucleoid occlusion protein [Lactobacillus iners LEAF 2052A-d]
gi|312875345|ref|ZP_07735353.1| nucleoid occlusion protein [Lactobacillus iners LEAF 2053A-b]
gi|315653262|ref|ZP_07906185.1| ParB family protein [Lactobacillus iners ATCC 55195]
gi|308164529|gb|EFO66781.1| nucleoid occlusion protein [Lactobacillus iners LactinV 11V1-d]
gi|311089179|gb|EFQ47615.1| nucleoid occlusion protein [Lactobacillus iners LEAF 2053A-b]
gi|311090962|gb|EFQ49356.1| nucleoid occlusion protein [Lactobacillus iners LEAF 2052A-d]
gi|311092428|gb|EFQ50797.1| nucleoid occlusion protein [Lactobacillus iners LEAF 2062A-h1]
gi|315489425|gb|EFU79064.1| ParB family protein [Lactobacillus iners ATCC 55195]
Length = 281
Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 79/272 (29%), Positives = 145/272 (53%), Gaps = 7/272 (2%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGL 88
K + I + +IVPN + PR F E + L Q+I+ G++QP++VR I D+
Sbjct: 8 KDKLPENKKITDIDLDNIVPNRYQPRRAFNDETIAQLAQTIQEQGLLQPIVVRHILDSDK 67
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERR+RA K+ + +P I+ ++ ++ +A++EN+QR++LNP++EA Y QL+
Sbjct: 68 YEIIAGERRYRAVKLLKWATIPAIVNSMADEQVASLALIENLQRENLNPIDEAKAYAQLM 127
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS--TSDPL 206
TQ + VG+++S++AN +R+LKL V+ + ++I+ H R L++ SD
Sbjct: 128 KINNLTQEQLAHQVGRTQSYIANKIRLLKLTPKVQSFLVAQKITPRHGRALLTLSASDQD 187
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT-DLEKKISSKVGL-N 264
IV K ++V++TE + Q+ D + + + +T + ++
Sbjct: 188 RAVSEIVKKDLTVKETENMAQDIDRYFSNMGQEGATKAKASRKVTVKTGSDFTVQINTIK 247
Query: 265 ISIKHRNNKGQFCI--KYETNEQLKIICSLLG 294
+IK + G + ++ + KI +L
Sbjct: 248 QAIKMVKDSGMIVKQHENKSKDSYKITIEILK 279
>gi|313157225|gb|EFR56655.1| ParB-like protein [Alistipes sp. HGB5]
Length = 575
Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 109/193 (56%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+ + ++ +++ I P+ +NPR F+ L +L +SI+ G++QP+ VR I +
Sbjct: 2 ATTAVQAVEKNITSVALADIQPSNYNPRKNFDETSLAELAESIRQQGVLQPIGVRPIADN 61
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L+E+P I+ + ++++ E+AI EN+QRKD+ P+EEA Y++L
Sbjct: 62 RFEIVFGERRYRASLMAELAEIPAIVMEISDETAEEMAITENLQRKDVTPIEEANAYQKL 121
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I + + GK+ +++ L+ + L + ++ ++EI++ A + + +
Sbjct: 122 IDSGRHDVQSLTVQFGKTEAYIRTRLKFVSLIPEIALLLEQDEITISVASEICRYGEEIQ 181
Query: 208 LAQVIVSKKMSVR 220
K V+
Sbjct: 182 REVYDQHLKEGVQ 194
>gi|253571019|ref|ZP_04848427.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251839968|gb|EES68051.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 577
Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 109/193 (56%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+ + ++ +++ I P+ +NPR F+ L +L +SI+ G++QP+ VR I +
Sbjct: 4 ATTAVQAVEKNITSVALADIQPSNYNPRKNFDETSLAELAESIRQQGVLQPIGVRPIADN 63
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L+E+P I+ + ++++ E+AI EN+QRKD+ P+EEA Y++L
Sbjct: 64 RFEIVFGERRYRASLMAELAEIPAIVMEISDETAEEMAITENLQRKDVTPIEEANAYQKL 123
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I + + GK+ +++ L+ + L + ++ ++EI++ A + + +
Sbjct: 124 IDSGRHDVQSLTVQFGKTEAYIRTRLKFVSLIPEIALLLEQDEITISVASEICRYGEEIQ 183
Query: 208 LAQVIVSKKMSVR 220
K V+
Sbjct: 184 REVYDQHLKEGVQ 196
>gi|224026967|ref|ZP_03645333.1| hypothetical protein BACCOPRO_03726 [Bacteroides coprophilus DSM
18228]
gi|224020203|gb|EEF78201.1| hypothetical protein BACCOPRO_03726 [Bacteroides coprophilus DSM
18228]
Length = 410
Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+++ ++ +++ ++ P+ +NPR F+ L +L +SI+ G++QP+ VR I++
Sbjct: 4 EATAIQSVEKNITMVALANVQPSNYNPRKNFDEASLAELSESIRQQGVLQPIGVRPIEDN 63
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L ++P ++ + ++ + E+A+ EN+QRKD+ P+EEA Y++L
Sbjct: 64 RFEIVFGERRYRASLMAGLEDIPAVVMEISDEVAEEMAVTENLQRKDVTPIEEANAYQKL 123
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I + + GK+ S++ L+ + L + +++ ++EI++ A + + +
Sbjct: 124 IDSGRHDVQSLAVQFGKNESYIRTRLKFVSLMPEIAQLLEQDEITISVASEICRYGEDIQ 183
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
K V+ N K + +Y TDLE+
Sbjct: 184 KEVYNKHLKEGVQY---------NSWRGMKASDVARNIERQYTTDLER 222
>gi|309805110|ref|ZP_07699163.1| nucleoid occlusion protein [Lactobacillus iners LactinV 09V1-c]
gi|309809020|ref|ZP_07702894.1| nucleoid occlusion protein [Lactobacillus iners SPIN 2503V10-D]
gi|312871043|ref|ZP_07731145.1| nucleoid occlusion protein [Lactobacillus iners LEAF 3008A-a]
gi|325913528|ref|ZP_08175893.1| nucleoid occlusion protein [Lactobacillus iners UPII 60-B]
gi|308165564|gb|EFO67794.1| nucleoid occlusion protein [Lactobacillus iners LactinV 09V1-c]
gi|308170676|gb|EFO72695.1| nucleoid occlusion protein [Lactobacillus iners SPIN 2503V10-D]
gi|311093371|gb|EFQ51713.1| nucleoid occlusion protein [Lactobacillus iners LEAF 3008A-a]
gi|325477107|gb|EGC80254.1| nucleoid occlusion protein [Lactobacillus iners UPII 60-B]
Length = 282
Score = 70.1 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 79/272 (29%), Positives = 145/272 (53%), Gaps = 7/272 (2%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGL 88
K + I + +IVPN + PR F E + L Q+I+ G++QP++VR I D+
Sbjct: 9 KDKLPENKKITDIDLDNIVPNRYQPRRAFNDETIAQLAQTIQEQGLLQPIVVRHILDSDK 68
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERR+RA K+ + +P I+ ++ ++ +A++EN+QR++LNP++EA Y QL+
Sbjct: 69 YEIIAGERRYRAVKLLKWATIPAIVNSMADEQVASLALIENLQRENLNPIDEAKAYAQLM 128
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS--TSDPL 206
TQ + VG+++S++AN +R+LKL V+ + ++I+ H R L++ SD
Sbjct: 129 KINNLTQEQLAHQVGRTQSYIANKIRLLKLTPKVQSFLVAQKITPRHGRALLTLSASDQD 188
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT-DLEKKISSKVGL-N 264
IV K ++V++TE + Q+ D + + + +T + ++
Sbjct: 189 RAVSEIVKKDLTVKETENMAQDIDRYFSNMGQEGATKAKASRKVTVKTGSDFTVQINTIK 248
Query: 265 ISIKHRNNKGQFCI--KYETNEQLKIICSLLG 294
+IK + G + ++ + KI +L
Sbjct: 249 QAIKMVKDSGMIVKQHENKSKDSYKITIEILK 280
>gi|296163470|ref|ZP_06846219.1| parB-like partition protein [Burkholderia sp. Ch1-1]
gi|295886285|gb|EFG66154.1| parB-like partition protein [Burkholderia sp. Ch1-1]
Length = 324
Score = 69.7 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 85/156 (54%), Gaps = 2/156 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ + + IVPNP PR F L +L +SI+ G++QP++VR +++ Y+I+A
Sbjct: 55 ESTGTTSQLPVTEIVPNPWQPRRVFNEAKLAELAESIREVGLMQPIVVRRVESA-YQIVA 113
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RA K+ + ++ + ++ + +A+VEN+ R DL E A+ + SE+
Sbjct: 114 GERRWRAHKILGAEHIKTVVIDCSDQDMIVLALVENMDRDDLTDYEVAISLRRSESEFP- 172
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
++ + VG SR+ + L LP +++ + +
Sbjct: 173 SRKRLAEAVGLSRTGLYQFLAFENLPGFMKKDLDLQ 208
>gi|332854654|ref|ZP_08435466.1| ParB-like protein [Acinetobacter baumannii 6013150]
gi|332867670|ref|ZP_08437777.1| ParB-like protein [Acinetobacter baumannii 6013113]
gi|332727897|gb|EGJ59297.1| ParB-like protein [Acinetobacter baumannii 6013150]
gi|332733810|gb|EGJ64960.1| ParB-like protein [Acinetobacter baumannii 6013113]
Length = 303
Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 123/282 (43%), Gaps = 8/282 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + + E + + I I +P+ PR FE L++L SI G++QP+
Sbjct: 15 NTEKHQQAQKDNIKELKEFRRNVPIEDISRSPNQPRKVFEESQLKELADSINEIGLLQPI 74
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
VR +DN Y++IAGERR RA ++ S + II + ++ + + + EN++R+DL E
Sbjct: 75 TVRKLDNLKYELIAGERRLRAHQLLGKSVIEAIIIDANDVEASLLTLAENLKRQDLTDYE 134
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
+G L + + + + +G +R + L +LP ++ + E LG
Sbjct: 135 IFIGLNSLDEKLKKNKQRLANSLGLNREDMYKYLAYERLPQAILNDLDLEPGLLGRTAAT 194
Query: 200 VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY---LTDLEKK 256
+ + + ++ E V+++ ++ K E ++ T + +K
Sbjct: 195 AFKKFLSDHLEQLSEAETALLGAWEKVKDKKLEQSKVTAYAEKLLSQDPEKLTTTSVVRK 254
Query: 257 I--SSKVGLNISIKHRNNKGQF---CIKYETNEQLKIICSLL 293
I S K+ NI + + K I + QL+ L
Sbjct: 255 IEYSGKIAGNIKLNQKQLKVSLNISEIDEASLLQLEDFLKQL 296
>gi|329920828|ref|ZP_08277415.1| nucleoid occlusion protein [Lactobacillus iners SPIN 1401G]
gi|328935608|gb|EGG32075.1| nucleoid occlusion protein [Lactobacillus iners SPIN 1401G]
Length = 281
Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 79/272 (29%), Positives = 146/272 (53%), Gaps = 7/272 (2%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGL 88
K + I + +IVPN + PR F E + L Q+I+ G++QP++VR I D+
Sbjct: 8 KDKLPENKKITDIDLDNIVPNRYQPRRAFNDETIAQLAQTIQEQGLLQPIVVRHILDSDK 67
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERR+RA K+ + +P I+ ++ ++ +A++EN+QR++LNP++EA Y QL+
Sbjct: 68 YEIIAGERRYRAVKLLKWATIPAIVNSMADEQVASLALIENLQRENLNPIDEAKAYAQLM 127
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS--TSDPL 206
TQ + VG+++S++AN +R+LKL V+ + ++I+ H R L++ SD
Sbjct: 128 KINNLTQEQLAHQVGRTQSYIANKIRLLKLTPKVQSFLVAQKITPRHGRALLTLSASDQD 187
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT-DLEKKISSKVGL-N 264
IV K ++V++TE + Q+ D + + + + +T + ++
Sbjct: 188 RAVSEIVKKDLTVKETENMAQDIDRYFSNKAQEGATKAKASRKVTVKTGSDFTVQINTIK 247
Query: 265 ISIKHRNNKGQFCI--KYETNEQLKIICSLLG 294
+IK + G + ++ + KI +L
Sbjct: 248 QAIKMVKDSGMIVKQHENKSKDSYKITIEILK 279
>gi|259501222|ref|ZP_05744124.1| chromosome partitioning protein SpoOJ [Lactobacillus iners DSM
13335]
gi|302191030|ref|ZP_07267284.1| chromosome partitioning protein ParB [Lactobacillus iners AB-1]
gi|325911354|ref|ZP_08173767.1| nucleoid occlusion protein [Lactobacillus iners UPII 143-D]
gi|259167349|gb|EEW51844.1| chromosome partitioning protein SpoOJ [Lactobacillus iners DSM
13335]
gi|325476914|gb|EGC80067.1| nucleoid occlusion protein [Lactobacillus iners UPII 143-D]
Length = 281
Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 79/272 (29%), Positives = 145/272 (53%), Gaps = 7/272 (2%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGL 88
K + I + +IVPN + PR F E + L Q+I+ G++QP++VR I D+
Sbjct: 8 KDKLPENKKIKDIDLDNIVPNRYQPRRAFNDETIAQLAQTIQEQGLLQPIVVRHILDSDK 67
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERR+RA K+ + +P I+ ++ ++ +A++EN+QR++LNP++EA Y QL+
Sbjct: 68 YEIIAGERRYRAVKLLKWATIPAIVNSMADEQVASLALIENLQRENLNPIDEAKAYAQLM 127
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS--TSDPL 206
TQ + VG+++S++AN +R+LKL V+ + ++I+ H R L++ SD
Sbjct: 128 KINNLTQEQLAHQVGRTQSYIANKIRLLKLTPKVQSFLVAQKITPRHGRALLTLSASDQD 187
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT-DLEKKISSKVGL-N 264
IV K ++V++TE + Q+ D + + + +T + ++
Sbjct: 188 RAVSEIVKKDLTVKETENMAQDIDRYFSNMGQEGATKAKASRKVTVKTGSDFTVQINTIK 247
Query: 265 ISIKHRNNKGQFCI--KYETNEQLKIICSLLG 294
+IK + G + ++ + KI +L
Sbjct: 248 QAIKMVKDSGMIVKQHENKSKDSYKITIEILK 279
>gi|225156832|ref|ZP_03724935.1| ParB-like partition protein [Opitutaceae bacterium TAV2]
gi|224802778|gb|EEG21028.1| ParB-like partition protein [Opitutaceae bacterium TAV2]
Length = 186
Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+ LNPLEEA GY LI ++ TQ + VGKSR+ VAN LR+L L +R +
Sbjct: 7 IENLQRESLNPLEEAFGYASLIRDFDLTQEAVAERVGKSRAGVANALRLLSLDEELRGFV 66
Query: 187 RKEEISLGHARTLVSTSDPLSLA---QVIVSKKMSVRDTEELVQEQDNKKEKRKKI---- 239
K +S+GHA+ L+ D A + ++ +SVR TE+LVQ +
Sbjct: 67 AKGLVSVGHAKVLLGVEDSAQRAVLARRVIEGGLSVRATEKLVQTHKAAASPVPPVAGAR 126
Query: 240 --FEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ + + +EK++ S +G ++++H +G+ I+Y N+ L+ I LG
Sbjct: 127 TGSKLPPVEAAAVASIEKRLISHLGARVALQHTPKRGKIVIEYAGNDDLQRILEKLG 183
>gi|291531938|emb|CBK97523.1| ParB-like partition proteins [Eubacterium siraeum 70/3]
Length = 263
Score = 69.7 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 135/270 (50%), Gaps = 21/270 (7%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K + I +++ I NP+ PR YF+ LE L SIK +G++QPL VR +G Y
Sbjct: 5 TKDKKITGQVITVNVREIDLNPNQPRKYFDKAELESLAISIKENGLLQPLTVRKKTDGRY 64
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
++IAGERR RA A + EV VII + + + S +AI+EN+QR DLN +EEA+ ++L+
Sbjct: 65 ELIAGERRLRACIFAGIHEVRVIIEDRNEEESSVLAIIENIQRCDLNCIEEAVAMQRLMD 124
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLS 207
YGYTQ + +GK++S +AN +R+LKL + + + R L+
Sbjct: 125 HYGYTQEKLARKLGKAQSTIANKIRLLKLSDKLLGKALEHGLCERQIRALIRLPEEQREK 184
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI 267
+ I ++V +TE+ + + K+K K K Y+ ++ + + +
Sbjct: 185 AEEHIYKYGLNVSETEKYIDKLLA-KKKVDKPKWTFTAKRLYINNINRTLETM------- 236
Query: 268 KHRNNKGQFCIKYETN--EQ---LKIICSL 292
G I + + E+ L+ I +
Sbjct: 237 ---KKSG---IDFISEKHEENGYLEYIIRI 260
>gi|254885067|ref|ZP_05257777.1| ParB-like nuclease domain-containing protein [Bacteroides sp.
4_3_47FAA]
gi|254837860|gb|EET18169.1| ParB-like nuclease domain-containing protein [Bacteroides sp.
4_3_47FAA]
Length = 578
Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 109/194 (56%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + ++ +++ +I P+ +NPR F+ L +L +SI+ G++QP+ VR I +
Sbjct: 4 ATTAAAQAVEKNITSVALANIQPSNYNPRKNFDETSLAELAESIRQQGVLQPIGVRPIAD 63
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
++I+ GERR+RA+ MA L+E+P + + ++++ E+AI EN+ RKD+ P+EEA Y++
Sbjct: 64 NRFEIVFGERRYRASLMAELTEIPATVMEISDETAEEMAITENLHRKDVTPIEEANAYQK 123
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
LI + + GK+ +++ L+ + L + ++ ++EI++ A + + +
Sbjct: 124 LIDSGRHDVQSLTVQFGKTEAYIRTRLKFVSLIPEIALLLEQDEITISVASEICRYGEEI 183
Query: 207 SLAQVIVSKKMSVR 220
K V+
Sbjct: 184 QREVYDQHLKEGVQ 197
>gi|269928575|ref|YP_003320896.1| parB-like partition protein [Sphaerobacter thermophilus DSM 20745]
gi|269787932|gb|ACZ40074.1| parB-like partition protein [Sphaerobacter thermophilus DSM 20745]
Length = 358
Score = 69.3 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 7/209 (3%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
AL + SP + + I + I P+PH PR F+ E LE+L SI G
Sbjct: 22 DALFQDT-----SPRAVGVSDLVTAKEIRLDRIEPDPHQPRRTFDQERLEELAASIAQEG 76
Query: 75 IIQPLIVRAIDNGLYKII-AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
++QP+ VR + +I GERR+RAA+MA L+ +P ++R+V + L ++ENV R+
Sbjct: 77 VLQPIAVRYDEERDRYVILHGERRWRAAQMAGLTAIPAVVRDVPEERRLLQQLMENVVRE 136
Query: 134 DLNPLEEALGYEQLISEYGY-TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
DLN ++ A L ++ G + + VG RS + +L KLP +V+E IR +S
Sbjct: 137 DLNAVDRAAALRALKAQMGDASWERVAEAVGIKRSRLFQLLGTEKLPDAVQEDIRAGRLS 196
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRD 221
+R L + A + +
Sbjct: 197 EKQSRVLQGLAPAAQAALARLIVDEGLGQ 225
>gi|134298758|ref|YP_001112254.1| parB-like partition protein [Desulfotomaculum reducens MI-1]
gi|134051458|gb|ABO49429.1| parB-like partition protein [Desulfotomaculum reducens MI-1]
Length = 279
Score = 69.3 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 2/202 (0%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ + +I PNP PR F+ + + +L SIK +G++Q I + Y+I+ GERR+RA
Sbjct: 32 ELPLDTITPNPGQPRKEFDPKKISELAVSIKEYGVLQ-PIGVRVIPTGYEIVFGERRWRA 90
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
A A L + + DN IA++EN+ R+DL+ +E+A+ + ++ + + +G
Sbjct: 91 ANEADLKTI-PCVIVPDNADRKTIALIENIHRQDLSAMEKAMAIKDMMVDENLSLEAVGK 149
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
+G ++ V +L IL LP + + +++ HAR L+ + + +
Sbjct: 150 KLGLGKTRVHQLLNILNLPEEMLANFCRADLNETHARALLLLKSYPEAQKELFQDILLQG 209
Query: 221 DTEELVQEQDNKKEKRKKIFEG 242
T + + + +
Sbjct: 210 LTGNQALNRAEEYISKIPVKNP 231
>gi|262371436|ref|ZP_06064753.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262313658|gb|EEY94708.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 303
Score = 69.3 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 59/281 (20%), Positives = 124/281 (44%), Gaps = 8/281 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + + E + + I I +P+ PR F+ + +++L +SI G++QP+ VR ++N
Sbjct: 22 AQKDNIKELKEFRRNVPIEDISRSPYQPRKKFDPQEIKELSESIDEVGLLQPITVRKLEN 81
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
+++IAGERR RA ++ S + II + +++ + + + EN++R+DL E +G
Sbjct: 82 LKFELIAGERRLRAHELLKKSTIEAIIIDANDEEASLLTLAENLKRQDLTDFEIYIGLNG 141
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
L + + +G +R + L KLP V + ++ LG
Sbjct: 142 LDESLKKNKQRLAKSLGLNREDMYKYLAFEKLPEVVLGDLAQDPQLLGRTAATAFKKFLS 201
Query: 207 SLAQVIVSKKMSVRDTEELVQEQD---NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
A + + ++ + V+ K + +E T + KKI +
Sbjct: 202 DHADLKELAEEALINAWNKVKLGKLEQTKAVSHAEKILTQGNQETASTSVVKKIEYAGKV 261
Query: 264 NISIKHRNNKGQF-----CIKYETNEQLKIICSLLGENDFE 299
+IK + + + I + ++L+I+ L E + +
Sbjct: 262 AGNIKFNDKQLKVSLNISSIDNASLDKLEILLKELVERNEK 302
>gi|224541703|ref|ZP_03682242.1| hypothetical protein CATMIT_00875 [Catenibacterium mitsuokai DSM
15897]
gi|224525372|gb|EEF94477.1| hypothetical protein CATMIT_00875 [Catenibacterium mitsuokai DSM
15897]
Length = 269
Score = 69.3 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 83/227 (36%), Positives = 145/227 (63%), Gaps = 4/227 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
KK I ++ + I+ IV N PR +FE E +++L +SI +G++QP++VR + Y
Sbjct: 11 KKRNVIKDAYCFLDINDIVANKEQPRTHFEDEKIQELAESIMQNGLLQPIVVREYEGK-Y 69
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+I+ GERR+RA K+A ++EVP II+ +D+ + A+VEN+QR++L+ +EEAL Y+Q++
Sbjct: 70 QIVVGERRYRACKLAGITEVPCIIQELDDNQTANAALVENIQRENLSAIEEALAYQQILD 129
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---STSDPL 206
G TQ + VGK +S VAN LR+LKLP +V+E ++K+EIS HAR L+ T+
Sbjct: 130 TQGLTQAQLAEKVGKKQSTVANKLRLLKLPMTVQESVKKKEISERHARALLKLEDTAQQN 189
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
++ + I+ ++V +TE+ + + K+++ ++ S+ + L +
Sbjct: 190 NMLKEILEHNLTVDETEKRIAKLLTPKKEKPRVRTFSKSVKIALNTI 236
>gi|295101872|emb|CBK99417.1| ParB-like partition proteins [Faecalibacterium prausnitzii L2-6]
Length = 264
Score = 68.9 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 92/177 (51%), Gaps = 1/177 (0%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ + + I S+ P+P R F + L L SI+ +G++Q I Y+
Sbjct: 3 ERKKSAGKIYALPIESVQPSPFQARTNFNEQELAGLAASIRENGLLQ-PIAVRKKEDGYE 61
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
++AGERR RA KMA + +P I+ + + + + ++EN+QR++LNP E+A G ++
Sbjct: 62 LVAGERRLRACKMAKMQTIPAILCDYADDKTAAMGLLENLQRENLNPFEQAQGLRDVMVL 121
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ TQ + +G ++ +AN LR+L+L R+ + ++ HAR ++ +
Sbjct: 122 WDCTQAEAAKRLGMAQPTLANKLRLLQLTQDQRQFVLDNGLTERHARAVLRLPENRR 178
>gi|302877165|ref|YP_003845798.1| parB-like partition protein [Clostridium cellulovorans 743B]
gi|307687864|ref|ZP_07630310.1| parB-like partition protein [Clostridium cellulovorans 743B]
gi|302580022|gb|ADL54034.1| parB-like partition protein [Clostridium cellulovorans 743B]
Length = 259
Score = 68.9 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 89/242 (36%), Positives = 141/242 (58%), Gaps = 7/242 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ +S + IVPN + PR +F+ G+ +L QSI GIIQPL VR + Y+++AGE
Sbjct: 2 QNTVYYVSPYEIVPNLYQPRKFFDEVGINELAQSISIFGIIQPLSVRRLGENRYELVAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK A L EVPVII +VD+K S IA++EN+QR+DLN LEEA + LI E+ YTQ
Sbjct: 62 RRLRAAKKAGLGEVPVIIVDVDDKESAAIALLENLQREDLNYLEEAEAFYNLIKEHSYTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVI 212
+ +GK +S +AN LR+LKL + +R+ + ++ HAR L + + + +
Sbjct: 122 EQLAKEIGKKQSTIANKLRLLKLDNEIRKQLIDNNLTERHARALLKLPTLEAQIKVLDTV 181
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEG----SREKEKYLTDLEKKISSKVGLNISIK 268
+ K ++V++TE L++++ N K + + K + K++ K G++ K
Sbjct: 182 IKKNLNVKETELLIEKELNFINDIGKDGKKRIRTNSMNSKLYINTIKQVFDKFGIDAKYK 241
Query: 269 HR 270
+
Sbjct: 242 SK 243
>gi|330399467|ref|YP_004030565.1| chromosome partitioning protein parB [Burkholderia rhizoxinica HKI
454]
gi|312170204|emb|CBW77243.1| Chromosome partitioning protein parB [Burkholderia rhizoxinica HKI
454]
Length = 293
Score = 68.9 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 26 DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID 85
++ + I + I PNP PR F + +L +I + G+ +P+++R
Sbjct: 23 EASHTSDFDVGRQHMMIPVDKIEPNPFQPRTVFNEAKIRELATTISADGLGEPVLLRCKG 82
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
+G Y++IAGERR+RA K+ + + ++ + D+ + +A+VEN+QR+DL E ALG +
Sbjct: 83 DG-YQLIAGERRWRAVKLLNQPTIEALVIDADDAKTAILALVENLQREDLADFEVALGIK 141
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
++ ++ + + +G RS + L LP SV+E +R
Sbjct: 142 LVMDQFPQR-SKLAEYLGIERSDLYRYLAFHALPESVQERLRAN 184
>gi|312128796|ref|YP_003993670.1| parb-like partition protein [Caldicellulosiruptor hydrothermalis
108]
gi|311778815|gb|ADQ08301.1| parB-like partition protein [Caldicellulosiruptor hydrothermalis
108]
Length = 280
Score = 68.9 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 71/170 (41%), Positives = 111/170 (65%), Gaps = 1/170 (0%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ + I ++PNP+ PR+ F+ +E+L SIK++G++QP+IVR Y +IAGERR
Sbjct: 21 IEDVQIEKVLPNPYQPRSNFDERLIEELATSIKTYGLLQPIIVRKKG-DFYYLIAGERRL 79
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA K S++ I+ NV + S +A++EN+QR+DL+ EEA GY+QL E+G TQ +I
Sbjct: 80 RACKHLGYSKIKAIVINVTDIESAILALIENIQRQDLDFFEEAQGYKQLADEFGLTQVEI 139
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
VGK++S +AN +R+L+LP+ +R MIR+ +S HAR L+ +
Sbjct: 140 AKRVGKTQSAIANKIRLLQLPAEIRWMIREHGLSERHARALLKLESQEDM 189
>gi|160914903|ref|ZP_02077117.1| hypothetical protein EUBDOL_00911 [Eubacterium dolichum DSM 3991]
gi|158433443|gb|EDP11732.1| hypothetical protein EUBDOL_00911 [Eubacterium dolichum DSM 3991]
Length = 254
Score = 68.9 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 132/216 (61%), Gaps = 3/216 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
++I I PNP+ PR F E L +L QSI+ +G+IQP+ VR +NG Y+IIAGERR
Sbjct: 3 ETKMVTIDQIEPNPYQPRIEFNDEALMELAQSIRENGLIQPISVRKTENG-YQIIAGERR 61
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
+RA KM + EVPV+I + ++ E+A+VEN+QR++L+ +EEA Y ++ G Q++
Sbjct: 62 YRAMKMNGMVEVPVVIMDANDIQMAEMALVENIQRENLSAIEEAKSYVDIMRFTGVNQSE 121
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSK 215
+ VGKS+S +AN +R+L+L +++ + +I+ HAR L + + + IV K
Sbjct: 122 LALRVGKSQSAIANKIRLLQLDENIQNAVSAHQITERHARALLGLDSDKQQKMLDTIVKK 181
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
++V TE+ V+++ KE++KK+ K +
Sbjct: 182 GLNVSQTEKAVKQEKLPKEEKKKVMLKGISKNVKIA 217
>gi|322436148|ref|YP_004218360.1| parB-like partition protein [Acidobacterium sp. MP5ACTX9]
gi|321163875|gb|ADW69580.1| parB-like partition protein [Acidobacterium sp. MP5ACTX9]
Length = 568
Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ ++I I + NPR F+ L +L +SIK +G+IQP+ VR D G ++I+A
Sbjct: 2 QDSSAFQFLAIDQIHESTTNPRRTFDEAKLYELAESIKHNGLIQPITVRPNDQG-FEIVA 60
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
G RR+RA+ +A + VP I +D+ +LE ++EN QR D++P EEA G+++L+ GY
Sbjct: 61 GARRYRASLLAEVFSVPTRIVEIDDAQALEWQLIENSQRVDVHPYEEAQGFQRLLDMPGY 120
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
+ GKS SH+ L +L+L ++ E E I+ HA L A
Sbjct: 121 DVAALVEKSGKSASHIYARLSLLQLIPTIAEAFTAERITASHANLLARLPQDAQSAAYEQ 180
Query: 214 SKKMSVRDTE 223
+ +D E
Sbjct: 181 CWRKDWQDKE 190
>gi|226357406|ref|YP_002787145.1| chromosome partitioning, ParB family [Deinococcus deserti VCD115]
gi|226319396|gb|ACO47391.1| putative chromosome partitioning, ParB family [Deinococcus deserti
VCD115]
Length = 294
Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/132 (36%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 13 GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
GL A++G Q++ + + + ++ P PR F+ LE L SI++
Sbjct: 11 GLDAMLGATAQAMQNTLAT--------RALPVDALTPGRQQPRRTFDQPALEALADSIRA 62
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G++QPL+VR + G +I+AGERR+RAA++A L EVPV IR +D++ +L ++EN+QR
Sbjct: 63 EGVLQPLLVRPVAGGH-EIVAGERRWRAAQLAGLREVPVFIRELDDRQALAAGLMENLQR 121
Query: 133 KDLNPLEEALGY 144
+DLN ++E
Sbjct: 122 QDLNVMDEVDAK 133
>gi|186686758|ref|YP_001869951.1| parB-like partition protein [Nostoc punctiforme PCC 73102]
gi|186469110|gb|ACC84910.1| parB-like partition protein [Nostoc punctiforme PCC 73102]
Length = 307
Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 1 MSNNYSK---RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
MS K RRL +GL ALIGE ++ ++I I + PR Y
Sbjct: 1 MSIKRDKPYGRRL-KGLEALIGESVDTVPCG-----------QFVTIEKIQLSVQQPRRY 48
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
F+ + LE L QS+K HGI++PL+VR + N Y+++AGERR+RAA +A L+EVPVI R+++
Sbjct: 49 FDPKKLEQLVQSVKEHGILEPLLVRYLSNDKYELVAGERRYRAASLAGLTEVPVIARSLN 108
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ +L++++VEN+QR DLNP+EE G +LI+ + + ++
Sbjct: 109 DQEALQLSLVENLQRDDLNPIEETEGILELIALQLDKRVPEVISLLYKMQNILAGKVTDN 168
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ I + + + D V Q + +
Sbjct: 169 V-------ISNSDAEDVKMIFTGLGLMEWESFTANRLPLLRLPDEILEVLRQGKIEYTKA 221
Query: 238 KIFEGSREKEKYLTDLEKKISSKVGLN 264
K+ +EK + + LE+ I + LN
Sbjct: 222 KVIAKLKEKTERIALLEEAILQNLSLN 248
>gi|309799268|ref|ZP_07693516.1| stage 0 sporulation protein J [Streptococcus infantis SK1302]
gi|308117113|gb|EFO54541.1| stage 0 sporulation protein J [Streptococcus infantis SK1302]
Length = 213
Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 66/221 (29%), Positives = 124/221 (56%), Gaps = 9/221 (4%)
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
+IQP+IVR Y+I+AGERR+RA+ A LSEVPVI++ + ++ + +I+EN+QR++
Sbjct: 1 MIQPIIVRKSPVLGYEILAGERRYRASIAAGLSEVPVIVKQLSDQDMMLHSIIENLQREN 60
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
LNP+EEA Y+ LI + G+T +I +GKSR ++ N++R+L LP + + ++S
Sbjct: 61 LNPIEEAKAYQSLIDK-GFTHTEIAEKMGKSRPYITNLVRLLGLPKHILTEVESGKLSQA 119
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
HAR L+ S + + ++ + ++ +K +EK+ ++ + E
Sbjct: 120 HARLLIQLSSDKQDKLLNRIQTENLSVRQV-------EQILQKTKKISKKEKDYFVKEEE 172
Query: 255 KKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLG 294
+ + +GL + IK + + G+ I + ++ + + L
Sbjct: 173 QTLKKILGLEVHIKLQKKDSGKITISFHNQDEYQQFINSLK 213
>gi|206602565|gb|EDZ39046.1| ParB-like partition protein [Leptospirillum sp. Group II '5-way
CG']
Length = 313
Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 97/178 (54%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + T + + I I I +P PR L++L SI HG+++P++VR
Sbjct: 15 TKKPGTGSSESALSEIPIDRIRFDPDQPRKSLPQGSLQELADSIARHGMLEPVLVRPAQE 74
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G + +I GERR RAA++A L+ VP ++RN++ I ++ENVQR+DL PLE A ++
Sbjct: 75 GAWLLICGERRVRAAQLAGLASVPALVRNLEEPDIRLIQLIENVQREDLPPLEIARAIDE 134
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSD 204
++ YG TQ +GKSRS+V+ L +L + + + I A TL++ +
Sbjct: 135 IVKRYGLTQETCAKALGKSRSYVSRHLSLLMSDETTMKALETGMIRDPEAVTLMNRME 192
>gi|317496042|ref|ZP_07954403.1| ParB partition protein [Gemella moribillum M424]
gi|316913848|gb|EFV35333.1| ParB partition protein [Gemella moribillum M424]
Length = 294
Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 123/235 (52%), Gaps = 5/235 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
EK + + I + IVPN + PR+ F E +++L +SIK +G++Q + VR I N
Sbjct: 17 RAEKVGISDDDVLREILVDKIVPNKYQPRHEFTEEKIKELAESIKQNGLLQSITVRDIGN 76
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G Y++IAGERR RA K + I++ + + +A++EN+QR++L P+EEA Y++
Sbjct: 77 GFYELIAGERRLRAIKYLQHATTKAIVKELTEEQMATLALIENIQREELTPIEEAHAYQE 136
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
L+ TQ+++ +GK+++ VAN LR+LKL V E I ++I+ H R +V +
Sbjct: 137 LLRINKLTQDELAKSLGKTQATVANKLRLLKLSKKVIEAINSKKITERHGRAMVKLDESA 196
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
+ + V + + K + KI + + +K+ K+
Sbjct: 197 QEKILS-----QILSQNLNVSQTEEKIDTYLKIKKDVKPVSTNANYDAQKLVIKL 246
>gi|218129486|ref|ZP_03458290.1| hypothetical protein BACEGG_01063 [Bacteroides eggerthii DSM 20697]
gi|217988216|gb|EEC54539.1| hypothetical protein BACEGG_01063 [Bacteroides eggerthii DSM 20697]
Length = 473
Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 105/189 (55%), Gaps = 1/189 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-D 85
+ + +++ +I P+ +NPR +F+ L +L +SI+ G++QP+ VR I D
Sbjct: 2 ETANIQSVVENNIVSVALMNIQPSSYNPRKHFDEVSLAELAESIRQQGVLQPIGVRPIAD 61
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
++I+ GERR+RAA M L+E+ +I +V ++++ E+A+ EN+QRKD+ P+EEA Y+
Sbjct: 62 TDRFEIVFGERRYRAALMVELTEISAVILHVSDETAAEMAVTENLQRKDVTPIEEANAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+L+ Y + GK+ +++ L+ + L + E++ K+EI++ A +
Sbjct: 122 KLMESGRYDVQSLAEQFGKNENYIRTRLKFVSLIPEIAELLEKDEITISVASEICRYGTD 181
Query: 206 LSLAQVIVS 214
+
Sbjct: 182 IQKEVYYKH 190
>gi|309808174|ref|ZP_07702084.1| ParB-like protein [Lactobacillus iners LactinV 01V1-a]
gi|308168555|gb|EFO70663.1| ParB-like protein [Lactobacillus iners LactinV 01V1-a]
Length = 197
Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/173 (35%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGL 88
K + I + +IVPN + PR F E + L Q+I+ G++QP++VR I D+
Sbjct: 8 KDKLPENKKITDIDLDNIVPNRYQPRRAFNDETIAQLAQTIQEQGLLQPIVVRHILDSDK 67
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+IIAGERR+RA K+ + +P I+ ++ ++ +A++EN+QR++LNP++EA Y QL+
Sbjct: 68 YEIIAGERRYRAVKLLKWATIPAIVNSMADEQVASLALIENLQRENLNPIDEAKAYAQLM 127
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
TQ + VG+++S++AN +R+LKL V+ + ++I+ H R L++
Sbjct: 128 KINNLTQEQLAHQVGRTQSYIANKIRLLKLTPKVQSFLVAQKITPRHGRALLT 180
>gi|150392470|ref|YP_001322519.1| parB-like partition protein [Alkaliphilus metalliredigens QYMF]
gi|149952332|gb|ABR50860.1| parB-like partition protein [Alkaliphilus metalliredigens QYMF]
Length = 270
Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 135/218 (61%), Gaps = 4/218 (1%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
T + I+I S++PNP+ PR F LE+L QSIK++GI+QP+ VR I Y++I
Sbjct: 2 NTTEKKMMEIAIDSVIPNPYQPRKTFSQVSLEELSQSIKAYGILQPISVRKIGEEKYELI 61
Query: 93 AGERRFRAAKMASLSEVPVIIR-NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
AGERR +AAK+A L +P II + ++K + +AI+EN+QR+DLN +EEA GY LI ++
Sbjct: 62 AGERRLKAAKLARLVTIPAIINTHYNDKDAAVLAIIENLQREDLNFIEEAEGYANLIHDH 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSL 208
+TQ ++ +GK++S +AN LRIL+L +++M+ + E++ H R L + +
Sbjct: 122 EFTQQELAEHIGKNQSTIANKLRILRLRDDIKKMLIEHELTERHGRALLKLPDDELRMDI 181
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ ++ +V+ TEEL++E +K+ + +K
Sbjct: 182 LKKVIKYDYNVKKTEELIKEMLEDISSQKEEAQKVTKK 219
>gi|237719944|ref|ZP_04550425.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450496|gb|EEO56287.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 579
Score = 68.2 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+++ ++ +++ ++ P+ +NPR F+ L +L +SI+ G++QP+ VR I++
Sbjct: 2 EATAIQSVEKNITMVALANVQPSNYNPRKNFDEASLAELSESIRQQGVLQPIGVRPIEDN 61
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L ++P ++ + ++ + E+A+ EN+QRKD+ P+EEA Y++L
Sbjct: 62 RFEIVFGERRYRASLMAGLEDIPAVVMEISDEVAEEMAVTENLQRKDVTPIEEANAYQKL 121
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I + + GK+ S++ L+ + L + +++ ++EI++ A + + +
Sbjct: 122 IDSGRHDVQSLAVQFGKNESYIRTRLKFVSLMPEIAQLLEQDEITISVASEICRYGEDIQ 181
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
K V+ N K + +Y TDLE+
Sbjct: 182 KEVYNKHLKEGVQY---------NSWRGMKASDVARNIERQYTTDLER 220
>gi|265763606|ref|ZP_06092174.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263256214|gb|EEZ27560.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 581
Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+++ ++ +++ ++ P+ +NPR F+ L +L +SI+ G++QP+ VR I+N
Sbjct: 4 EATAIQSVEKNITMVALANVQPSNYNPRKNFDEASLAELSESIRQQGVLQPIGVRPIENN 63
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L ++P ++ + ++ + E+A+ EN+QRKD+ P+EEA Y++L
Sbjct: 64 RFEIVFGERRYRASLMAGLEDIPAVVMEISDEVAEEMAVTENLQRKDVTPIEEANAYQKL 123
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I + + GK+ S++ L+ + L + +++ ++EI++ A + + +
Sbjct: 124 IDSGRHDVQSLAVQFGKNESYIRTRLKFVSLMPEIAQLLEQDEITISVASEICRYGEDIQ 183
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
K V+ N K + +Y TDLE+
Sbjct: 184 KEVYNKHLKEGVQY---------NSWRGMKASDVARNIERQYTTDLER 222
>gi|298483980|ref|ZP_07002150.1| partitioning protein [Bacteroides sp. D22]
gi|298269889|gb|EFI11480.1| partitioning protein [Bacteroides sp. D22]
Length = 581
Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+++ ++ +++ ++ P+ +NPR F+ L +L +SI+ G++QP+ VR I+N
Sbjct: 4 EATAIQSVEKNITMVALANVQPSNYNPRKNFDEASLAELSESIRQQGVLQPIGVRPIENN 63
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L ++P ++ + ++ + E+A+ EN+QRKD+ P+EEA Y++L
Sbjct: 64 RFEIVFGERRYRASLMAGLEDIPAVVMEISDEVAEEMAVTENLQRKDVTPIEEANAYQKL 123
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I + + GK+ S++ L+ + L + +++ ++EI++ A + + +
Sbjct: 124 IDSGRHDVQSLAVQFGKNESYIRTRLKFVSLMPEIAQLLEQDEITISVASEICRYGEDIQ 183
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
K V+ N K + +Y TDLE+
Sbjct: 184 KEVYNKHLKEGVQY---------NSWRGMKASDVARNIERQYTTDLER 222
>gi|327490337|gb|EGF22124.1| sulfite reductase [NADPH] hemoprotein alpha subunit [Streptococcus
sanguinis SK1058]
Length = 226
Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/165 (44%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E+ I++ I NP+ PR F + +E+L SIK +G+IQP+I+R Y+I+AGER
Sbjct: 2 ENFQYIALKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGER 61
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRAA L +P +++ + + L+ AI+EN+QR+DLNP+EEA Y+ L+ + T +
Sbjct: 62 RFRAASFLGLETIPAVVKELSDDEMLKQAIIENLQREDLNPIEEAESYQNLVDKGL-THD 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+I I+GKSR +++NI+R+L+L VR+ I++EEIS GHAR LV
Sbjct: 121 EIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHARLLVP 165
>gi|124514561|gb|EAY56074.1| ParB-like partition protein [Leptospirillum rubarum]
Length = 313
Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 96/178 (53%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + T + + I I I +P PR L++L SI HG+++P++VR
Sbjct: 15 TKKPGTGSSESALSEIPIDRIRFDPDQPRKSLPQGSLQELADSIARHGMLEPVLVRPAQE 74
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G + +I GERR RAA++A L+ VP ++RN+ I ++ENVQR+DL PLE A ++
Sbjct: 75 GAWLLICGERRVRAAQLAGLASVPALVRNLGEPDIRLIQLIENVQREDLPPLEIARAIDE 134
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSD 204
++ YG TQ +GKSRS+V+ L +L + + + I A TL++ +
Sbjct: 135 IVKRYGLTQETCAKALGKSRSYVSRHLSLLMSDETTMKALETGMIRDPEAVTLMNRME 192
>gi|53714114|ref|YP_100106.1| putative partitioning protein [Bacteroides fragilis YCH46]
gi|255009121|ref|ZP_05281247.1| putative partitioning protein [Bacteroides fragilis 3_1_12]
gi|293371311|ref|ZP_06617748.1| ParB-like protein [Bacteroides ovatus SD CMC 3f]
gi|294645280|ref|ZP_06722996.1| ParB-like protein [Bacteroides ovatus SD CC 2a]
gi|294808742|ref|ZP_06767475.1| ParB-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|313146871|ref|ZP_07809064.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|52216979|dbj|BAD49572.1| putative partitioning protein [Bacteroides fragilis YCH46]
gi|292633671|gb|EFF52226.1| ParB-like protein [Bacteroides ovatus SD CMC 3f]
gi|292639359|gb|EFF57661.1| ParB-like protein [Bacteroides ovatus SD CC 2a]
gi|294444039|gb|EFG12773.1| ParB-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|313135638|gb|EFR52998.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 581
Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+++ ++ +++ ++ P+ +NPR F+ L +L +SI+ G++QP+ VR I++
Sbjct: 4 EATAIQSVEKNITMVALANVQPSNYNPRKNFDEASLAELSESIRQQGVLQPIGVRPIEDN 63
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L ++P ++ + ++ + E+A+ EN+QRKD+ P+EEA Y++L
Sbjct: 64 RFEIVFGERRYRASLMAGLEDIPAVVMEISDEVAEEMAVTENLQRKDVTPIEEANAYQKL 123
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I + + GK+ S++ L+ + L + +++ ++EI++ A + + +
Sbjct: 124 IDSGRHDVQSLAVQFGKNESYIRTRLKFVSLMPEIAQLLEQDEITISVASEICRYGEDIQ 183
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
K V+ N K + +Y TDLE+
Sbjct: 184 KEVYNKHLKEGVQY---------NSWRGMKASDVARNIERQYTTDLER 222
>gi|256840338|ref|ZP_05545846.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256737610|gb|EEU50936.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 581
Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+++ ++ +++ ++ P+ +NPR F+ L +L +SI+ G++QP+ VR I++
Sbjct: 4 EATAIQSVEKNITMVALANVQPSNYNPRKNFDEASLAELSESIRQQGVLQPIGVRPIEDN 63
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L ++P ++ + ++ + E+A+ EN+QRKD+ P+EEA Y++L
Sbjct: 64 RFEIVFGERRYRASLMAGLEDIPAVVMEISDEVAEEMAVTENLQRKDVTPIEEANAYQKL 123
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I + + GK+ S++ L+ + L + +++ ++EI++ A + + +
Sbjct: 124 IDSGRHDVQSLAVQFGKNESYIRTRLKFVSLMPEIAQLLEQDEITISVASEICRYGEDIQ 183
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
K V+ N K + +Y TDLE+
Sbjct: 184 KEVYNKHLKEGVQY---------NSWRGMKASDVARNIERQYTTDLER 222
>gi|253567361|ref|ZP_04844810.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251943930|gb|EES84458.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 577
Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+++ ++ +++ ++ P+ +NPR F+ L +L +SI+ G++QP+ VR I++
Sbjct: 4 EATAIQSVEKNITMVALANVQPSNYNPRKNFDEASLAELSESIRQQGVLQPIGVRPIEDN 63
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L ++P ++ + ++ + E+A+ EN+QRKD+ P+EEA Y++L
Sbjct: 64 RFEIVFGERRYRASLMAGLEDIPAVVMEISDEVAEEMAVTENLQRKDVTPIEEANAYQKL 123
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I + + GK+ S++ L+ + L + +++ ++EI++ A + + +
Sbjct: 124 IDSGRHDVQSLAVQFGKNESYIRTRLKFVSLMPEIAQLLEQDEITISVASEICRYGEDIQ 183
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
K V+ N K + +Y TDLE+
Sbjct: 184 KEVYNKHLKEGVQY---------NSWRGMKASDVARNIERQYTTDLER 222
>gi|255008185|ref|ZP_05280311.1| putative partitioning protein [Bacteroides fragilis 3_1_12]
gi|313145902|ref|ZP_07808095.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313134669|gb|EFR52029.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 584
Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 106/189 (56%), Gaps = 1/189 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-D 85
+ + +++ +I P+ +NPR +F+ L +L +SI+ G++QP+ VR I D
Sbjct: 2 ETANIQSVVENNIVSVALMNIQPSSYNPRKHFDEVSLAELAESIRQQGVLQPIGVRPIAD 61
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
++I+ GERR+RAA MA L+E+ +I +V ++++ E+A+ EN+QRKD+ P+EEA Y+
Sbjct: 62 TDRFEIVFGERRYRAALMAELTEISAVILHVSDETAAEMAVTENLQRKDVTPIEEANAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+L+ Y + GK+ +++ L+ + L + E++ K+EI++ A +
Sbjct: 122 KLMESGRYDVQSLAEQFGKNENYIRTRLKFVSLIPEIAELLEKDEITISVASEICRYGTD 181
Query: 206 LSLAQVIVS 214
+
Sbjct: 182 IQKEVYYKH 190
>gi|251773328|gb|EES53877.1| ParB-like partition protein [Leptospirillum ferrodiazotrophum]
Length = 318
Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + L L L + ++ S + + I +P PR
Sbjct: 1 MAK--KSKFLN-DLDFL----TKGTNAGATGGAPASGSVQTLPLDRIRFDPDQPRKSMSE 53
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI HG+++P++VR + + GERR RAA +A L ++P ++R +D
Sbjct: 54 NTLQELADSISRHGVLEPVLVRPEGDDWILVC-GERRVRAAGLAGLEQIPAVVREMDIPE 112
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+ ++EN+QR+DL PL A L+ YG TQ +GKS+++V+ L +L+
Sbjct: 113 VRLVQLIENIQREDLPPLAIARALSDLLKTYGMTQEACARALGKSQTYVSRHLALLQSDD 172
Query: 181 SVREMIRKEEISLGHARTLVSTSDP 205
+ I A TL++ P
Sbjct: 173 LTMRALESGAIRDPEAVTLLNRMPP 197
>gi|160886743|ref|ZP_02067746.1| hypothetical protein BACOVA_04756 [Bacteroides ovatus ATCC 8483]
gi|156107154|gb|EDO08899.1| hypothetical protein BACOVA_04756 [Bacteroides ovatus ATCC 8483]
Length = 577
Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 106/193 (54%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+ + ++ +++ I + +NPR F+ L +L +SI+ G++QP+ VR I +
Sbjct: 4 ATTAVQAVEKNITSVALADIQSSSYNPRKNFDETSLAELAESIRQQGVLQPIGVRPIADN 63
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L+E+P + + ++++ E+AI EN+ RKD+ P+EEA Y++L
Sbjct: 64 RFEIVFGERRYRASLMAELAEIPATVMEISDETAEEMAITENLHRKDVTPIEEANAYQKL 123
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
I + + GK+ +++ L+ + L + ++ ++EI++ A + + +
Sbjct: 124 IDSGRHDVQSLTVQFGKTEAYIRTRLKFVSLIPEIAVLLEQDEITISVASEICRYGEEIQ 183
Query: 208 LAQVIVSKKMSVR 220
K V+
Sbjct: 184 REVYDQHLKEGVQ 196
>gi|319936581|ref|ZP_08010995.1| nucleoid occlusion protein [Coprobacillus sp. 29_1]
gi|319808379|gb|EFW04939.1| nucleoid occlusion protein [Coprobacillus sp. 29_1]
Length = 255
Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 127/222 (57%), Gaps = 2/222 (0%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
I IH I N PR +FE E +++L SI+ +G++QP++VR + Y+I+ GERRFRA
Sbjct: 9 IDIHDIEANEKQPRTHFEKEKIQELSVSIQQNGLLQPIVVRPYNGK-YQIVVGERRFRAC 67
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
K+A L EVP +++ + + A+VEN+QR++L+P+EEAL Y+QL+ TQ +
Sbjct: 68 KLAGLEEVPCMVQEYNEDQTATAALVENIQRENLSPIEEALAYQQLLDTQDITQEQLAEK 127
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRD 221
VGK +S +AN LR+L+LP +V+E +R+++I+ HAR L+ ++ +
Sbjct: 128 VGKKQSTIANKLRLLQLPMTVQEAVRRKDITERHARALLRLDSTAKQNNMLREIMAKGLN 187
Query: 222 TEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
E+ Q+ K + KK ++ + L + + +
Sbjct: 188 VEQTEQKIKA-KIEPKKQKPKAKSISQNLKIAMNTLDQAIQM 228
>gi|172064600|ref|YP_001812250.1| parB-like partition protein [Burkholderia ambifaria MC40-6]
gi|171998085|gb|ACB69001.1| parB-like partition protein [Burkholderia ambifaria MC40-6]
Length = 324
Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
G G+A+ + I EK ++ + + I PNP PR F L +L SI
Sbjct: 35 GPGMASALATAQDRIAELEKAAAAAASAE--VPVADIRPNPWQPRRVFNEAKLNELASSI 92
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
++ G+IQP++VR + Y+I+AGERR+RA ++ + V+ + ++ +A+ EN+
Sbjct: 93 RASGLIQPIVVRPV-TDGYEIVAGERRWRAHRLIGKESIRVVQVEISDQDMAMLALAENI 151
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
R L+ E +L Q E+ + + S +G +RS + +L LP + + + +
Sbjct: 152 VRDGLSDYEISLSIRQTEKEFP-NRTQMASALGMARSDLYRLLSFADLPEFIVKDLDLQP 210
Query: 191 I 191
Sbjct: 211 N 211
>gi|298480630|ref|ZP_06998826.1| partitioning protein [Bacteroides sp. D22]
gi|298273064|gb|EFI14629.1| partitioning protein [Bacteroides sp. D22]
Length = 587
Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 108/181 (59%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
++ ++ +++ ++ P+ +NPR F+ L +L +SI+ G++QP+ VR +++
Sbjct: 4 ETTAIQSTEKNITLVALVNVQPSNYNPRKNFDEASLAELSESIRQQGVLQPIGVRPVEDK 63
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L E+P I+ + ++++ E+A+ EN+QRKD+ P+EEA Y++L
Sbjct: 64 HFEIVFGERRYRASLMAGLEEIPAIVMEISDETAEEMAVTENLQRKDVTPIEEANAYQRL 123
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + + GK+ +++ L+ + L + +++ ++EI++ A + + +
Sbjct: 124 LDSGRHDVQSLAVQFGKNENYIYTRLKFVSLIPEIAQLLEQDEITISVATEICRYGEDIQ 183
Query: 208 L 208
Sbjct: 184 H 184
>gi|91781361|ref|YP_556568.1| ParB family protein [Burkholderia xenovorans LB400]
gi|91694021|gb|ABE37218.1| ParB family protein [Burkholderia xenovorans LB400]
Length = 324
Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 8 RRLGR-----GL-AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
+R GR GL AL ++ + + + I+PNP PR F
Sbjct: 27 KRSGRTQTAPGLAGAL------AVAQLRVQELESTGVASQLPVGGILPNPWQPRRVFNEG 80
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L +L +SI+ G++QP++VR ++N Y+I+AGERR+RA KM + + ++ + +
Sbjct: 81 KLTELAESIREVGLMQPIVVRRVEND-YQIVAGERRWRAHKMLGIDTIKAVVADCSDSDM 139
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+A+VEN+ R DL E + + +E+ + + +G SR+ + L LP
Sbjct: 140 AVLAMVENISRDDLADYEIGVAIRRSEAEFP-NRKRLAEAMGLSRAGLYQFLAFENLPDF 198
Query: 182 VREMIRKE 189
+++ + +
Sbjct: 199 IKKDLDIQ 206
>gi|313158788|gb|EFR58174.1| ParB-like protein [Alistipes sp. HGB5]
Length = 691
Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 109/193 (56%), Gaps = 3/193 (1%)
Query: 18 IGEVNQSIDSPEKKTETI--PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
IG VN ++ + + + ++ IV + +NPR F E L +L +SI+ G+
Sbjct: 52 IGAVNPVAETSPVEQPAVHPETDVRLLDLNKIVNSTYNPRKNFREETLLELAESIRQSGV 111
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
+QP+ VR D G ++I+ GERR+ AA MA+L +P ++R++ + + + AI EN+QR+D+
Sbjct: 112 LQPICVRPRDEG-FEIVYGERRYWAAAMANLKFIPALVRDLSDAEAEDAAITENLQREDV 170
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
P EEA Y++ + +T + GKS +++ + L++ +L ++ M+ KEEIS+G
Sbjct: 171 RPREEAAAYKRALQSGRHTIESLVGKFGKSEAYIRSRLKLCELIDALAGMLDKEEISVGV 230
Query: 196 ARTLVSTSDPLSL 208
A + +
Sbjct: 231 ATEIAKYPADIQQ 243
>gi|121605175|ref|YP_982504.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
gi|120594144|gb|ABM37583.1| parB-like partition protein [Polaromonas naphthalenivorans CJ2]
Length = 605
Score = 67.4 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/199 (30%), Positives = 111/199 (55%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
++ + T+ + + + +I +P NPR + +E +E+L +S + GI+QP+
Sbjct: 78 DLTDHRKTINLYTDAKLNKVEQLLLGTIHESPFNPRTNYPAEEMEELAESAREVGIMQPV 137
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR +G Y+++ G RR RAA A L +P I+R++ + S ++ VENVQR+DL+P++
Sbjct: 138 LVRPRGDGGYELVFGHRRHRAALTAKLEFIPAIVRDLTDAQSAQLQAVENVQRRDLDPMD 197
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EALGY I+ +G T++++ +GKSR+HV N L++ L + + +R +I A +
Sbjct: 198 EALGYAAFIAAHGITKDELARQIGKSRTHVYNRLKLATLHAPGQAALRAGKIRAEVATRV 257
Query: 200 VSTSDPLSLAQVIVSKKMS 218
+ A+ +
Sbjct: 258 ARVVGEKNQAKALALMLEP 276
>gi|322436699|ref|YP_004218911.1| parB-like partition protein [Acidobacterium sp. MP5ACTX9]
gi|321164426|gb|ADW70131.1| parB-like partition protein [Acidobacterium sp. MP5ACTX9]
Length = 562
Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
I+I I + NPR F+ LE+L SIK HG+IQP++VR +NG ++++A
Sbjct: 2 QDSSPFQYIAIDQIFESKTNPRQTFDQVKLEELAASIKHHGLIQPIVVRPKENG-FEVVA 60
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
G RR+R + +A VP I+ +++ ++E +VEN QR D++P EEA G+++L+ GY
Sbjct: 61 GARRYRTSLLAEEFSVPAHIKELNDAEAVEWQLVENSQRVDIHPYEEAQGFQRLLDVPGY 120
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
+ GKS SH+ L +L+L V E +E I+ HA +
Sbjct: 121 DVAALVEKSGKSTSHIYARLSLLQLIPKVAEAFVEERITASHANLIARLPQEHQADAFEN 180
Query: 214 SKKMSVRDTEELVQEQDN 231
+ +D E + +
Sbjct: 181 CWRKDWQDKEAHLLPAKH 198
>gi|289646531|ref|ZP_06477874.1| ParB family partitioning protein [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 297
Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 106/255 (41%), Gaps = 11/255 (4%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ + + I +P+ PR F+ LE+L SI S G+ +P+++R + N ++++ GE R+
Sbjct: 34 LEDVLVELIDRSPYQPRMIFDQAKLEELAGSIDSVGLGKPILIRPVGNR-FELVGGECRW 92
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA KM + ++ + + ++ +AI +N+Q + + + ++ +Q +
Sbjct: 93 RAHKMLGRVTIRAFVKPMSDDMAMLLAITDNIQNELTDYEKAVSYQRYMLKGADKSQRAL 152
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMS 218
+G + V L +++LP ++E++ + + S ++ +
Sbjct: 153 ARRLGVDHTVVNRCLDLVQLPEQIKEILNTKPHLITANYAKKFLEHSKSDENIVHRVVIQ 212
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCI 278
+ + + ++ G + + LE VG + + R +
Sbjct: 213 MAEKGIGQEAALRMIGQKLSACGGPKNQVVEPRKLEG-----VGS-VRLNGR----KLEF 262
Query: 279 KYETNEQLKIICSLL 293
K++ + I + L
Sbjct: 263 KFDKQVDPEKIMNKL 277
>gi|160914423|ref|ZP_02076638.1| hypothetical protein EUBDOL_00427 [Eubacterium dolichum DSM 3991]
gi|158433581|gb|EDP11870.1| hypothetical protein EUBDOL_00427 [Eubacterium dolichum DSM 3991]
Length = 309
Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/229 (19%), Positives = 95/229 (41%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P ++P + E + + SIK +G++
Sbjct: 10 LASVDDLFSTEEGRQDAKLEKIQEIPLSELHPFKNHPFKVKDDEAMMETADSIKQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDPEGGYELVAGHRRHRASELAEKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
E A Y+ + + + ++++ + + + I L
Sbjct: 130 SERAFAYKMKLEAIKHQGERSDLTSRQVGEKSQTSIQLVANQAGESQRQVQRFIRLTELI 189
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ + + ++S EE V D ++ ++
Sbjct: 190 PELLDMVDEKKIALNPAYELSFLKKEEQVDLLDAMDSEQATPSLSQAQR 238
>gi|226358016|ref|YP_002787755.1| ParB-like partition protein [Deinococcus deserti VCD115]
gi|226319659|gb|ACO47653.1| putative ParB-like partition protein [Deinococcus deserti VCD115]
Length = 297
Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L AL+G + + + + P PH PR F L +L SI+ +
Sbjct: 12 LDALLGPAG-------AGNLVSQDQLRMLDVRQLTPTPHQPRTTFTEGNLRELADSIREN 64
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++QP++VR G +I+AGERR+RAA++A L+ +P +R++D++ + + VEN+ R+
Sbjct: 65 GVLQPILVRTTPAG-LEIVAGERRWRAAQLAGLTTIPAYVRDLDDQQAAAASAVENLIRE 123
Query: 134 DLNPLEEALGYEQL 147
DLNPLEE ++
Sbjct: 124 DLNPLEEVEAKRRI 137
>gi|291037270|ref|ZP_06568234.1| chromosome partitioning protein ParB [Gluconacetobacter xylinus
NBRC 3288]
Length = 293
Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 130/270 (48%), Gaps = 20/270 (7%)
Query: 1 MSNNYSKRR----LGRGLAA-LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR 55
M+ + L G+AA LI + + S + K I + + P+P PR
Sbjct: 1 MATRRKTKAPSPIL--GVAAGLIDDASNSFVRQDGKFRHT----FEIPLTEVAPDPDQPR 54
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLI----VRAIDNGLYKIIAGERRFRAAKMASLSEVPV 111
F+ E + L +++ + G +QP++ + + + I+AGERR+RAA+ A S +
Sbjct: 55 KSFDDESIAALAETMVAEGQLQPILVRRVTNSQSDKRWVIVAGERRWRAAQHAGWSSMLA 114
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
I + + A++EN+QR DLNPLEEA G ++LI + G+ Q+ G ++GKSR +++
Sbjct: 115 IEH---DGDAEVAALIENLQRVDLNPLEEATGIQRLIEKRGWNQSQAGEVLGKSRGEISS 171
Query: 172 ILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
IL+IL LP+ + E + E + ++ Q ++ + + + T + ++
Sbjct: 172 ILKILTLPTDILEELTSERGVARNTLVELARVPDPVRQQELIEQARTGQLTVKAIRLGRA 231
Query: 232 KKEKRKKIFEGSREKEKY--LTDLEKKISS 259
E+ + + + + +++S
Sbjct: 232 DLERPESAPTRKPSGFTFTSVDRMAQRLSE 261
>gi|189461109|ref|ZP_03009894.1| hypothetical protein BACCOP_01756 [Bacteroides coprocola DSM 17136]
gi|265753927|ref|ZP_06089282.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|189432199|gb|EDV01184.1| hypothetical protein BACCOP_01756 [Bacteroides coprocola DSM 17136]
gi|263235641|gb|EEZ21165.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 584
Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-D 85
+ + +++ +I P+ +NPR +F+ L +L +SI+ G++QP+ VR I D
Sbjct: 2 ETANIQSVVENNIVSVALMNIQPSNYNPRKHFDEASLAELAESIRQQGVLQPIGVRPIVD 61
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
++II GERR+RAA MA L+E+P +I +V ++++ E+A+ EN+QRKD+ P+EEA Y+
Sbjct: 62 TDRFEIIFGERRYRAALMAELTEIPAVILHVSDETAAEMAVTENLQRKDVTPIEEANAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+L+ Y + GK+ +++ L+ + L + E++ K+EI++ A +
Sbjct: 122 KLMESGRYDVQSLAVQFGKNENYIRTRLKFVSLIPEIAELLEKDEITISVASEICRYGTD 181
Query: 206 LSLAQVIVS 214
+
Sbjct: 182 IQKEVYYKH 190
>gi|254881402|ref|ZP_05254112.1| ParB-family protein [Bacteroides sp. 4_3_47FAA]
gi|254834195|gb|EET14504.1| ParB-family protein [Bacteroides sp. 4_3_47FAA]
Length = 473
Score = 67.0 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 105/189 (55%), Gaps = 1/189 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-D 85
+ + +++ +I P+ +NPR +F+ L +L +SI+ G++QP+ VR I D
Sbjct: 2 ETANIQSVVENNIVSVALMNIQPSSYNPRKHFDKVSLAELAESIRQQGVLQPIGVRPIAD 61
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
++I+ GERR+RAA MA L E+ +I +V ++++ E+A+ EN+QRKD+ P+EEA Y+
Sbjct: 62 TDRFEIVFGERRYRAALMAELIEISAVILHVSDETAAEMAVTENLQRKDVTPIEEANAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+L+ Y + GK+ +++ L+ + L + E++ K+EI++ A +
Sbjct: 122 KLMESGRYDVQSLAEQFGKNENYIRTRLKFVSLIPEIAELLEKDEITISVASEICRYGTD 181
Query: 206 LSLAQVIVS 214
+
Sbjct: 182 IQKEVYYKH 190
>gi|313640196|gb|EFS04779.1| ParB family chromosome partioning protein [Listeria seeligeri FSL
S4-171]
Length = 64
Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 6 KPARVPIFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 57
>gi|209518121|ref|ZP_03266950.1| parB-like partition protein [Burkholderia sp. H160]
gi|209501425|gb|EEA01452.1| parB-like partition protein [Burkholderia sp. H160]
Length = 324
Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+S+ I+PNP PR F L +L +SI+ G++QP++VR + + Y+I+AGERR+RA
Sbjct: 60 QLSVAGILPNPWQPRRVFNEAKLAELAESIREVGLMQPIVVRRVADD-YQIVAGERRWRA 118
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
KM L + ++ + + +A+VEN+ R DL E + + +E+ + +
Sbjct: 119 HKMLDLDTIKAVVADCSDSDMAVLAMVENISRDDLADYEIGVAIRRSETEFP-NRKRLAE 177
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKE 189
+G SR+ + L LP +++ + +
Sbjct: 178 AMGLSRAGLYQFLSFDNLPDFIKKDLDIQ 206
>gi|313635567|gb|EFS01776.1| ParB family chromosome partioning protein [Listeria seeligeri FSL
N1-067]
Length = 65
Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 7 KPARVPIFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 58
>gi|330997961|ref|ZP_08321795.1| ParB-like protein [Paraprevotella xylaniphila YIT 11841]
gi|329569565|gb|EGG51335.1| ParB-like protein [Paraprevotella xylaniphila YIT 11841]
Length = 570
Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 99/183 (54%), Gaps = 1/183 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ ++ +++ I P+ NPR +F+ L +L +SIK G++QP+ VR +D
Sbjct: 2 KTKANQSAAEKNITMVALADIQPSGFNPRKHFDEAALYELAESIKRQGVLQPITVRPVDG 61
Query: 87 GLYKII-AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
I GERR+RA+ +A E+P I+ + ++ + E+AI EN+QRKD+ P+EEA Y+
Sbjct: 62 TDRYGIVFGERRYRASVIAGRDEIPAIVTKLSDEEAEEMAITENLQRKDVTPVEEAAAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+LI +T + + GK+ +++ L+ L + ++ +E+++ A + +
Sbjct: 122 RLIESGRHTVQTLAQLFGKNENYIRTRLKFTALIPEIAALLEADELTISVAAEICRYGED 181
Query: 206 LSL 208
+
Sbjct: 182 IQR 184
>gi|225016769|ref|ZP_03705961.1| hypothetical protein CLOSTMETH_00681 [Clostridium methylpentosum
DSM 5476]
gi|224950437|gb|EEG31646.1| hypothetical protein CLOSTMETH_00681 [Clostridium methylpentosum
DSM 5476]
Length = 277
Score = 66.6 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 73/218 (33%), Positives = 117/218 (53%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ I + IV NP PR F+ E L+ L SI+ +GI+QPL VR Y++IA
Sbjct: 15 KVVNKVVLIPVSEIVSNPAQPRTLFDLEELQSLSDSIRENGILQPLTVRLNARSQYELIA 74
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR +AA++A + EVP I+ D K S +A++EN+QR+DLN EEA LI E+
Sbjct: 75 GERRLKAAQIAEMKEVPCIVVETDAKQSAVLALLENIQRQDLNFFEEAKAISNLIVEWNV 134
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
TQ + +GK++S +AN LR+L+L + I ++ HAR ++ +DP + +VI
Sbjct: 135 TQEEASKRLGKAQSTIANKLRLLRLDEKQQMKILDAGLTERHARAILKLTDPGMIDKVIY 194
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ ++ + D ++++K K +
Sbjct: 195 YVGAKRLNVKQTEEYIDGILKEQQKSKRKYIHVVKDVR 232
>gi|323342286|ref|ZP_08082518.1| chromosome partitioning protein SpoOJ [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463398|gb|EFY08592.1| chromosome partitioning protein SpoOJ [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 251
Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 78/225 (34%), Positives = 126/225 (56%), Gaps = 6/225 (2%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA-IDNGLYKIIAGERRF 98
I+I I PN + PR F E L +L QSI +G++QP++VR + Y+IIAGERR+
Sbjct: 5 REIAIEKIKPNRNQPRLTFNDESLLELGQSISENGLLQPIVVREVNEIDEYEIIAGERRY 64
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA +M +EVP II N+D+ S +A++EN+QR+DL+ LEEA Y ++ TQ ++
Sbjct: 65 RAMRMFGFTEVPCIISNIDDDKSATLALIENIQREDLSVLEEAKAYRDILRIQKITQKEL 124
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMS 218
+ VGKS+S +AN +R+L+LP V E + + I+ HAR L+S +
Sbjct: 125 ATKVGKSQSAIANKIRLLELPEPVLEALGERRITERHARALLSVEK-----EKTEEVLDE 179
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
+ + + V+E + K +K +R +++ I +G+
Sbjct: 180 ILNKKLNVKETETLINKPRKKKTVTRGISQHIKIGINTIKQSIGM 224
>gi|253681351|ref|ZP_04862149.1| protein YyaA [Clostridium botulinum D str. 1873]
gi|253562589|gb|EES92040.1| protein YyaA [Clostridium botulinum D str. 1873]
Length = 259
Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 78/166 (46%), Positives = 113/166 (68%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ IS I+PN + PR YF E +++L +SIK++GIIQPL VR + + Y++IAGE
Sbjct: 2 KKDIQYISTDIIIPNTYQPRKYFNEETIDELGESIKTYGIIQPLSVRKLQDNKYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RRFRAA L EVPVI+ ++ +K S IA++EN+QR++LN LEEA Y LI ++ YTQ
Sbjct: 62 RRFRAATKIGLKEVPVIVIDICDKDSAAIALLENIQREELNFLEEAEAYYNLIQQHEYTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+ + I+GK +S +AN LRILKL S +R+ + K ++ HAR L+
Sbjct: 122 SQLAKIIGKKQSTIANKLRILKLDSEIRQDVLKNNLTERHARALLK 167
>gi|291513801|emb|CBK63011.1| ParB-like partition proteins [Alistipes shahii WAL 8301]
Length = 649
Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 107/193 (55%), Gaps = 3/193 (1%)
Query: 18 IGEVNQ--SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
IG VN E+ + ++ IV + +NPR F + L +L +SIK G+
Sbjct: 11 IGAVNPVAETSPAEQPAAHPETDVRLLDLNKIVNSTYNPRKNFREDTLLELAESIKQSGV 70
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
+QP+ VR D G ++I+ GERR+ AA MA+L +P ++R++ + + + AI EN+QR+D+
Sbjct: 71 LQPICVRPRDEG-FEIVYGERRYWAAAMANLKFIPALVRDLSDAEAEDAAITENLQREDV 129
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
P EEA Y++ + +T + GKS +++ + L++ +L ++ M+ KEEIS+G
Sbjct: 130 RPREEAAAYKRALQSGRHTIESLVGKFGKSEAYIRSRLKLCELIDALAGMLDKEEISVGV 189
Query: 196 ARTLVSTSDPLSL 208
A + +
Sbjct: 190 ATEIAKYPADIQQ 202
>gi|56808866|ref|ZP_00366577.1| COG1475: Predicted transcriptional regulators [Streptococcus
pyogenes M49 591]
Length = 189
Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 108/193 (55%), Gaps = 5/193 (2%)
Query: 103 MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
MA L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T ++I +
Sbjct: 1 MAGLKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYM 60
Query: 163 GKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDT 222
GKSR +++N LR+L+LP+ + + I + +IS GHAR L++ SD + +++
Sbjct: 61 GKSRPYISNTLRLLQLPAPIIKTIEEGKISAGHARALLTLSDDKQQLYLT----YKIQNE 116
Query: 223 EELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYE 281
V++ + + K + T LEK+++ +GL++++K N+ G I +
Sbjct: 117 GLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYLQISFS 176
Query: 282 TNEQLKIICSLLG 294
+++L I + L
Sbjct: 177 NDDELNRIINKLK 189
>gi|312144696|ref|YP_003996142.1| parB-like partition protein [Halanaerobium sp. 'sapolanicus']
gi|311905347|gb|ADQ15788.1| parB-like partition protein [Halanaerobium sp. 'sapolanicus']
Length = 270
Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 72/239 (30%), Positives = 123/239 (51%), Gaps = 4/239 (1%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
+ E ++I I NP PR F+ +++L SI + G+IQP+ VR DN Y++I
Sbjct: 11 KGNNEEITQLNIADISANPFQPRREFKDSEIQELADSINNFGLIQPITVRKKDNK-YELI 69
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR RAAK ++P +IR +++ EIA+VEN+QRKDLN LEEA+ Y++L+ E+
Sbjct: 70 AGERRLRAAKKLGKLKIPAVIRKFNDQEMAEIALVENLQRKDLNFLEEAVAYQRLLEEFN 129
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI 212
+Q ++ + K +S +AN LR+L+L ++E++ + +S H R L+ T+ +++
Sbjct: 130 LSQKELAERLSKGQSTIANKLRLLQLDDKIQEILIENNLSERHGRALLKTNSVELQLEIL 189
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN 271
E + +K+ + + L + + IK
Sbjct: 190 NEVIDKDLTVRESENLIKAALKPKKEKKKNIKHLSDDLRLFANSLEKTLK---EIKSSG 245
>gi|210624045|ref|ZP_03294162.1| hypothetical protein CLOHIR_02114 [Clostridium hiranonis DSM 13275]
gi|210153252|gb|EEA84258.1| hypothetical protein CLOHIR_02114 [Clostridium hiranonis DSM 13275]
Length = 268
Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 74/162 (45%), Positives = 111/162 (68%), Gaps = 1/162 (0%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + I SI+PNP+ PR +F L++L SIK HGIIQ I + Y+I+AGE
Sbjct: 3 EKKIIEVEIDSILPNPYQPRLHFSDSALKELADSIKIHGIIQ-PITVRKKDDHYEIVAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RRFRA+K+A L +VPVII ++++++S +A++EN+QR+DL+ LEEA+GY LI EYG+TQ
Sbjct: 62 RRFRASKLAGLEKVPVIITDMNDEASAVVAMLENLQREDLDYLEEAIGYSNLIKEYGFTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+ +GKS+S +AN +R+LKLP +R ++ +S H R
Sbjct: 122 QQLAEKLGKSQSTIANKIRLLKLPEHIRNEAMEKGLSERHTR 163
>gi|293399788|ref|ZP_06643934.1| hypothetical protein HMPREF0863_00071 [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291306188|gb|EFE47431.1| hypothetical protein HMPREF0863_00071 [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 254
Score = 66.2 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 79/217 (36%), Positives = 120/217 (55%), Gaps = 3/217 (1%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
E I+I I PNP+ PR F+ + L DL QSI+ +G+IQ I N Y+IIAGER
Sbjct: 2 EDTKMIAIDLIEPNPYQPRLEFDQDALMDLAQSIRENGLIQ-PITVRKVNDKYQIIAGER 60
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRA ++ EVP I + D E+A+VEN+QR++L+ +EEA Y +++ G Q+
Sbjct: 61 RFRALRLNGAVEVPANIMDADEVQMAEMALVENIQRENLSAIEEAKSYVEIMKYAGINQS 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVS 214
+ VGKS+S +AN +R+L L V+E + IS HAR L + Q I
Sbjct: 121 QLALRVGKSQSSIANKIRLLNLDEEVQEAVSARRISERHARALLGLDEEKQKQTLQKIEK 180
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ ++V TE+L++E+ + +KK+ K +
Sbjct: 181 RGLTVAQTEKLLKEEAQGPKPKKKVMLKGISKSIRIA 217
>gi|291515823|emb|CBK65033.1| ParB-like partition proteins [Alistipes shahii WAL 8301]
Length = 574
Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 105/205 (51%), Gaps = 2/205 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+S +SI I PNP+NPR ++ L +L SI +HG+IQP+ VRA + G Y I+ GER
Sbjct: 18 KSTVLLSIDKIRPNPNNPRRSYDENALAELAASIATHGLIQPIRVRAAEQGGYIIVCGER 77
Query: 97 RFRAAKMASLSEVPVIIR--NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
R+RA ++ +E+ I+ D ++ ++A+ EN+QR+++ L+EA Y+ + G
Sbjct: 78 RYRAVQLLGQTEIEAIVDAAPADERAIFDLALSENIQREEMPSLDEAEAYKAAMQTLGGD 137
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVS 214
+ + GKS ++ +++ +L V++++R+ I+LG A L L
Sbjct: 138 AAAVAARFGKSEQYIYYRMKLNELIPDVKKLLRENSITLGLAMELARYGKDLQKTICKDR 197
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKI 239
K + V+E +
Sbjct: 198 LKDEEGWRKYSVKEFKRMVDAHYTN 222
>gi|322436737|ref|YP_004218949.1| parB-like partition protein [Acidobacterium sp. MP5ACTX9]
gi|321164464|gb|ADW70169.1| parB-like partition protein [Acidobacterium sp. MP5ACTX9]
Length = 559
Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 1/198 (0%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
I+I + + NPR F+ LE+L SIK HG+IQP++VR DNG ++++A
Sbjct: 2 QDSSPFQYIAIDQLFESKTNPRQTFDQTKLEELAASIKHHGLIQPIVVRPKDNG-FEVVA 60
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
G RR+RA+ +A VP I+ +++ ++E +VEN QR D++P EEA G+++L+ GY
Sbjct: 61 GARRYRASLLAEEFSVPAHIKELNDAEAIEWQLVENSQRVDVHPYEEAQGFQRLLDVPGY 120
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
+ GKS SH+ L +L+L V E +E I+ HA +
Sbjct: 121 DVAALVEKSGKSASHIYARLSLLQLIPKVAEAFVQERITASHANLIARLPQEHQADAFEN 180
Query: 214 SKKMSVRDTEELVQEQDN 231
+ +D E + +
Sbjct: 181 CWRKDWQDKEAHLLPAKH 198
>gi|8037925|gb|AAF71537.1|AF255728_3 SpoJ [Streptococcus pyogenes]
Length = 187
Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 106/190 (55%), Gaps = 5/190 (2%)
Query: 106 LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKS 165
L +VP II+ + S++ AIVEN+QR +LN +EEA Y+ L+ + T ++I +GKS
Sbjct: 2 LKKVPAIIKKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKS 61
Query: 166 RSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
R +++N LR+L+LP+ + + I + +IS GHAR L++ SD + +++
Sbjct: 62 RPYISNTLRLLQLPAPIIKAIEEGKISAGHARALLTLSDDKQQLYLT----HKIQNEGLS 117
Query: 226 VQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNE 284
V++ + + K + T LEK+++ +GL++++K N+ G I + ++
Sbjct: 118 VRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYLQISFSNDD 177
Query: 285 QLKIICSLLG 294
+L I + L
Sbjct: 178 ELNRIINKLK 187
>gi|158321887|ref|YP_001514394.1| parB-like partition protein [Alkaliphilus oremlandii OhILAs]
gi|158142086|gb|ABW20398.1| parB-like partition protein [Alkaliphilus oremlandii OhILAs]
Length = 265
Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 4/219 (1%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
++ + I + ++PNP+ PR F GLE+L SIK++GI+QP+ VR I Y++I
Sbjct: 2 NSLERRVEEILVEKVIPNPYQPRRTFSQIGLEELSASIKAYGILQPISVRKIGEDRYELI 61
Query: 93 AGERRFRAAKMASLSEVPVIIRN-VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
AGERR RAA++A L +P II + + S +AI+EN+QR+DLN +EEA GY LI ++
Sbjct: 62 AGERRLRAARLAELKTIPAIINHGYTDTDSAVLAIIENLQREDLNFVEEAEGYANLIEDH 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGHARTLVSTSDPLSL 208
G+TQ ++ VGK++S +AN LRIL+L +++ I + E L
Sbjct: 122 GFTQQELAEKVGKNQSTIANKLRILRLGPDIKKKILENGLTERHARALLKLPDDELREKA 181
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
I+ ++ +V+ TE+L++ K K++ + +
Sbjct: 182 LNKIIKEEFNVKKTEQLIKNMLEDIGKEKEVTPKQKIRS 220
>gi|60681274|ref|YP_211418.1| putative ParB-family protein [Bacteroides fragilis NCTC 9343]
gi|60492708|emb|CAH07481.1| putative ParB-family protein [Bacteroides fragilis NCTC 9343]
Length = 570
Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + +++ I P+ NPR +F+ L +L SIK G++QP+ VR +D
Sbjct: 2 KTKANQSAAERNITMVALADIQPSGFNPRKHFDETSLYELADSIKQQGVLQPITVRPVDG 61
Query: 87 GLYKII-AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
I GERR+RA+ +A E+P I+ + ++ + E+AI EN+QRKD+ P+EEA Y+
Sbjct: 62 TDRYGIVFGERRYRASVIAGRDEIPAIVTELSDEEAEEMAITENLQRKDVTPVEEAAAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+LI +T + + GK+ +++ L+ L + ++ +EI++ A + +
Sbjct: 122 RLIESGRHTVQTLAQLFGKNENYIRTRLKFTALIPEIAALLDADEITISVAAEICRYGED 181
Query: 206 LSL 208
+
Sbjct: 182 IQR 184
>gi|320326895|gb|EFW82921.1| ParB family partitioning protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330882727|gb|EGH16876.1| ParB family partitioning protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 334
Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 112/256 (43%), Gaps = 5/256 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + P+ + + + +++ IV +P PR F+ LE+L SI++ G+ QP+
Sbjct: 49 SESPQLQVPDSEAASSRTAIHILNVDQIVKSPFQPRLVFDQAALEELGTSIQTIGLGQPI 108
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + NGL+++I GERR+RA+K+ + +++ + + ++ +A+ +N Q + +
Sbjct: 109 LVRPLPNGLFELIGGERRWRASKLIGNMTIEAMVKPMPDALAMLLALTDNDQEDLTDYEK 168
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE---ISLGHA 196
+ L + + + +G + S ++ +L++++LP +R ++ +
Sbjct: 169 ARSYHRLLTNGEDSSMRALARRLGTNHSVISRLLQLIQLPERIRTILDGHPSLITANYAK 228
Query: 197 RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ +V K S ++ ++ E + K+ + +
Sbjct: 229 DFKDLATINEDFVVDVVEKMASSGLPQQAALRLIKREVDSASRPEAKQVKKSAIDGIGTL 288
Query: 257 ISSKVGLNISIKHRNN 272
+G + +K
Sbjct: 289 --RILGDRVEVKCAKG 302
>gi|254884147|ref|ZP_05256857.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|255013663|ref|ZP_05285789.1| putative partitioning protein [Bacteroides sp. 2_1_7]
gi|254836940|gb|EET17249.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 581
Score = 66.2 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 106/175 (60%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
+++ ++ +++ ++ P+ +NPR F+ L +L +SI+ G++QP+ VR I++
Sbjct: 4 EATAIQSVEKNITMVALANMQPSNYNPRKNFDEASLVELSESIRQQGVLQPIGVRPIEDN 63
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
++I+ GERR+RA+ MA L E+P I+ + ++ + E+A+ EN+QRKD+ P+EEA Y++L
Sbjct: 64 RFEIVFGERRYRASLMAELEEIPAIVMEISDEVAEEMAVTENLQRKDVTPIEEANAYQKL 123
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVST 202
I + + GK+ +++ L+ + L + +++ ++EI++ A +
Sbjct: 124 IDSGRHDVQSLAVQFGKNENYIRTRLKFVSLIPEIAQLLEQDEITISVASEICRY 178
>gi|313606036|gb|EFR83151.1| partition protein ParB homolg [Listeria monocytogenes FSL F2-208]
gi|313621916|gb|EFR92579.1| partition protein ParB homolg [Listeria innocua FSL J1-023]
Length = 64
Score = 65.9 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 6 KPARVPIFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 57
>gi|291569347|dbj|BAI91619.1| ParB-like partition protein [Arthrospira platensis NIES-39]
Length = 293
Score = 65.9 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 6/225 (2%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I IV + PR YF + + L SIKS GI+Q LIVR ID G Y+++AGERR+R
Sbjct: 16 RQIPIKQIVISKVQPRKYFSEQSINKLAASIKSSGILQDLIVRPIDKGKYELVAGERRYR 75
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AA++ L VP ++ + + +L+ A+ EN+QR+DLNP+EE +L++ ++
Sbjct: 76 AAQIVGLETVPAQVKEMSDAEALQCALTENIQREDLNPIEETEAILRLLA------INLN 129
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
V K RS + + K + + E + + + +
Sbjct: 130 DSVEKVRSLLHRMKNDAKKKVTTHSAMGTSEAEIVKSTFDSLGRMSWDSFVSNQLPLLKL 189
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
+ + + K + +E+ L LEK I+ K+ L
Sbjct: 190 PPEILKALGEGDIDYTKAKEIAKLKSEEERLALLEKAIAQKLTLR 234
>gi|160890731|ref|ZP_02071734.1| hypothetical protein BACUNI_03176 [Bacteroides uniformis ATCC 8492]
gi|237708243|ref|ZP_04538724.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|156859730|gb|EDO53161.1| hypothetical protein BACUNI_03176 [Bacteroides uniformis ATCC 8492]
gi|229457796|gb|EEO63517.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 570
Score = 65.9 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 98/183 (53%), Gaps = 1/183 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ ++ +++ I P+ NPR F+ L +L +SIK G++QP+ VR +D
Sbjct: 2 KTKANQSAAEKNITMVALADIQPSGFNPRKRFDEAALYELAESIKRQGVLQPITVRPVDG 61
Query: 87 GLYKII-AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
I GERR+RA+ +A E+P I+ + ++ + E+AI EN+QRKD+ P+EEA Y+
Sbjct: 62 TDRYGIVFGERRYRASVIAGRDEIPAIVTELSDEEAEEMAITENLQRKDVTPVEEAAAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+LI +T + + GK+ +++ L+ L + ++ +E+++ A + +
Sbjct: 122 RLIESGRHTVQTLAQLFGKNENYIRTRLKFTALIPEIAALLEADELTISVAAEICRYGED 181
Query: 206 LSL 208
+
Sbjct: 182 IQR 184
>gi|291566967|dbj|BAI89239.1| ParB-like partition protein [Arthrospira platensis NIES-39]
Length = 293
Score = 65.9 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 6/225 (2%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I IV + PR YF + + L SIKS GI+Q LIVR ID G Y+++AGERR+R
Sbjct: 16 RQIPIKQIVISKVQPRKYFSEQSINKLAASIKSSGILQDLIVRPIDKGKYELVAGERRYR 75
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AA++ L +P ++ + + +L+ A+ EN+QR+DLNP+EE +L++ ++
Sbjct: 76 AAQIVGLETIPAQVKEMSDAEALQCALTENIQREDLNPIEETEAILRLLA------INLN 129
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
V K RS + + K + + E + + + +
Sbjct: 130 DSVEKVRSLLHRMKNDAKKKVTTHSAMGTSEAEIVKSTFDSLGRMSWDSFVSNQLPLLKL 189
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
+ + + K + +E+ L LEK I+ K+ L
Sbjct: 190 PPEILKALGEGDIDYTKAKEIAKLKSEEERLALLEKAIAQKLTLR 234
>gi|295681064|ref|YP_003609638.1| parB-like partition protein [Burkholderia sp. CCGE1002]
gi|295440959|gb|ADG20127.1| parB-like partition protein [Burkholderia sp. CCGE1002]
Length = 324
Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+S+ I+PNP PR F L +L +SI+ G++QP++VR + + Y+I+AGERR+RA
Sbjct: 60 QLSVAGILPNPWQPRRVFNEAKLAELAESIREVGLMQPIVVRRVADD-YQIVAGERRWRA 118
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
KM + + ++ + + +A+VEN+ R DL E + + +E+ + +
Sbjct: 119 HKMLGMDTIKAVVADCSDSDMAVLAMVENISRDDLADYEIGVAIRRSEAEFP-NRKRLAE 177
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKE 189
+G SR+ + L LP +++ + +
Sbjct: 178 AMGLSRAGLYQFLSFDNLPDFIKKDLDIQ 206
>gi|218442792|ref|YP_002381112.1| parB-like partition protein [Cyanothece sp. PCC 7424]
gi|218175150|gb|ACK73882.1| parB-like partition protein [Cyanothece sp. PCC 7424]
Length = 312
Score = 65.5 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 23/264 (8%)
Query: 10 LGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIV-PNPHNPRNYFESEGLEDLCQ 68
LG G+ AL+G S P + I I P PR+YF+ E L+DL +
Sbjct: 14 LG-GVDALLGLGKPSSSDP----------PQTLPISDICLPQKGQPRHYFDPESLQDLIE 62
Query: 69 SIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
S++ HGI+QPL+VR ++ G Y+++AGERR+RAA L +VPV I+ + + + ++A+VE
Sbjct: 63 SVRQHGILQPLLVRPLEQGRYELVAGERRYRAASAVGLEKVPVYIKEMTAQEAWQLALVE 122
Query: 129 NVQRKDLNPLEEALGY--EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
N+QR LNP+EE G + + + + + + L + EMI
Sbjct: 123 NLQRDGLNPIEETEGILKLLELRLDLPQKQVVSLLYRMQHEFKKSEVTQNVLGNPTGEMI 182
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ +G +++ + V + + + K +
Sbjct: 183 EQMFNEVGRLT--------WQSFVTSRLPLLNLPEDILDVLRRGEIEYTKAKAIAKISDD 234
Query: 247 EKYLTDLEKKISSKVGLNISIKHR 270
E+ L++ + + + LN IK +
Sbjct: 235 EQRKLLLDEALVNSLSLN-QIKEK 257
>gi|319641254|ref|ZP_07995953.1| partitioning protein [Bacteroides sp. 3_1_40A]
gi|317387127|gb|EFV68007.1| partitioning protein [Bacteroides sp. 3_1_40A]
Length = 576
Score = 65.5 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 103/177 (58%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
++ + + I P+ +NPR F+ L +L +SI+ G++QP+ VR I ++I
Sbjct: 7 QSVAEKNIVSVVLADIQPSNYNPRKNFDVASLAELAESIRQQGVLQPIGVRPIAENRFEI 66
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
I GERR+RA+ MA L E+P I+ NV ++++ E+A+ EN+QRKD+ P+EEA Y++LI
Sbjct: 67 IFGERRYRASLMAGLEEIPAIVLNVSDETAEEMAVTENLQRKDVTPIEEANAYQRLIESG 126
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
+ + GK+ +++ L+ + L + E++ K+EI++ A + + +
Sbjct: 127 RHDIQSLAMQFGKNETYIRTRLKFVSLIPEIAELLEKDEITISVASEICRYGEDIQR 183
>gi|325272724|ref|ZP_08139077.1| ParB family partitioning protein [Pseudomonas sp. TJI-51]
gi|324102170|gb|EGB99663.1| ParB family partitioning protein [Pseudomonas sp. TJI-51]
Length = 331
Score = 65.5 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 108/272 (39%), Gaps = 15/272 (5%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ + E + E + + + I P+P+ PR +F+ LE+L SI S G+ I
Sbjct: 54 AQGAQEGQLILKDEWLEEVLVEQIDPSPYQPRMFFDQAKLEELAGSIDSVGLG-KPITIR 112
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
+++I GE R+RA KM ++ ++ + + ++ +AI +N+Q + + +
Sbjct: 113 PVGERFELIGGECRWRAHKMLGRDKIMAHVKPMSDDMAMLLAITDNLQNELTDYEKAVSY 172
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS 203
++ +Q + +G + V L +++LP ++E++ + +
Sbjct: 173 QRYMLKGADKSQRALARRLGVDHTVVNRCLDLIQLPEQIKEILDTKPHLITANYAKKFVE 232
Query: 204 DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
+ ++ + + + + ++ G + L+ VG
Sbjct: 233 HSKADVNIVHRIVIQMAEKGTGQEAALRMIGQKLAACSGPKPMMAEPRKLQG-----VGS 287
Query: 264 NISIKHRNNKGQFCIKYETNEQLK--IICSLL 293
+ + R ++++ ++++ I L
Sbjct: 288 -VRLNGRK------LEFKIDKEVDPQKIMDKL 312
>gi|266623874|ref|ZP_06116809.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
gi|288864306|gb|EFC96604.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
Length = 308
Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 85/192 (44%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P ++P + E + + SIK +G++
Sbjct: 10 LASVDDLFSTEEGRQDAKLEKIQEIPLSELHPFKNHPFKVRDDEAMMETADSIKQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDPEGGYELVAGHRRHRASELAEKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
E A Y+ + + + + +I + + I++
Sbjct: 130 SERAFAYKMKLDAIKHQGARTDLTSAQVGPKLTAAEKIAENSPDSKSQIKRFIRLTELIP 189
Query: 198 TLVSTSDPLSLA 209
L+ D +A
Sbjct: 190 ELMDMVDEKKIA 201
>gi|330886049|gb|EGH19950.1| ParB family partitioning protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 334
Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/260 (16%), Positives = 118/260 (45%), Gaps = 13/260 (5%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + P+ + + + +++ IV +P PR F+ LE+L SI++ G+ QP+
Sbjct: 49 SESPQLQVPDSEAASSRTAIHILNVDQIVKSPFQPRLVFDQAALEELGTSIQTIGLGQPI 108
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + NGL+++I GERR+RA+K+ + + +++ + + ++ +A+ +N Q + +
Sbjct: 109 LVRPLPNGLFELIGGERRWRASKLIGNTTIEAMVKPMSDDLAMLLALTDNDQEDLTDYEK 168
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE-------EIS 192
+ L + + + +G + S ++ +L++ +LP S+R ++
Sbjct: 169 ARSYHCLLKNGEDSSMRALARRLGTNHSVISRLLQLTQLPESIRTILDGHPALITANYAK 228
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+ ++ +++ + + S + +L++ + + + + + +
Sbjct: 229 DFKDLSTINEDLVVNVVEKMASTGLPQEAALKLIRREVDSVSRPEAKQAKKSAVD-GIGT 287
Query: 253 LEKKISSKVGLNISIKHRNN 272
L +G + +K
Sbjct: 288 L-----RILGDRVEVKCAKG 302
>gi|256840465|ref|ZP_05545973.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256737737|gb|EEU51063.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 570
Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + +++ I P+ NPR F+ L +L +SIK G++QP+ VR +D
Sbjct: 2 KTKANQSAAERNITMVALADIQPSGFNPRKRFDETSLYELAESIKRQGVLQPITVRPVDG 61
Query: 87 GLYKII-AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
I GERR+RA+ +A E+P I+ + ++ + E+AI EN+QRKD+ P+EEA Y+
Sbjct: 62 TDRYGIVFGERRYRASVIAGRDEIPAIVTELSDEEAEEMAITENLQRKDVTPVEEAAAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+LI +T + + GK+ +++ L+ L + ++ +EI++ A + +
Sbjct: 122 RLIESGRHTVQTLAQLFGKNENYIRTRLKFTALIPEIAALLDADEITISVAAEICRYGED 181
Query: 206 LSL 208
+
Sbjct: 182 IQR 184
>gi|291543434|emb|CBL16543.1| ParB-like partition proteins [Ruminococcus sp. 18P13]
Length = 289
Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 76/224 (33%), Positives = 129/224 (57%), Gaps = 8/224 (3%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
E ++ I+PNPH PR FE + L +SI+ +G++QPL VR + +G Y++I
Sbjct: 29 EKNTTRVIQVAPEEILPNPHQPRTEFEEVEILSLAESIQQNGLLQPLSVRKLPDG-YELI 87
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR RAA+ L VP I+ +V +++S +++VEN+QR++LN +EA ++LI+ YG
Sbjct: 88 AGERRLRAARELGLPTVPCIVFDVSDRTSAILSLVENIQRQNLNFFDEAAAIQRLIASYG 147
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE---EISLGHARTLVSTSDPLSLA 209
TQ D +G+++S VAN LR+LK+ R +I K E L S D ++
Sbjct: 148 MTQEDAAVKLGRAQSTVANKLRLLKISEPHRALILKYGLTERHARALLKLSSLEDRETVL 207
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
Q ++ + ++V TE+L+ + ++K E R++ + ++
Sbjct: 208 QQVIKRNLNVEKTEQLIADLL----HQQKERESYRQRSPFFQNV 247
>gi|160915382|ref|ZP_02077594.1| hypothetical protein EUBDOL_01390 [Eubacterium dolichum DSM 3991]
gi|158432773|gb|EDP11062.1| hypothetical protein EUBDOL_01390 [Eubacterium dolichum DSM 3991]
Length = 308
Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 72/141 (51%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P ++P + E + + SIK +G++
Sbjct: 10 LASVDDLFSTEEGRQDAKLEKIQEIPLSELHPFRNHPFKVKDDEAMMETADSIKQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDPEGGYELVAGHRRHRASELADKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E A Y+ + + +
Sbjct: 130 SERAFAYKMKLDAMKHQGERV 150
>gi|331268197|ref|YP_004394689.1| parB family protein [Clostridium botulinum BKT015925]
gi|329124747|gb|AEB74692.1| parB family protein [Clostridium botulinum BKT015925]
Length = 259
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 77/166 (46%), Positives = 113/166 (68%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + IS I+PN + PR YF E +++L +SIK++GIIQPL VR ++ Y++IAGE
Sbjct: 2 KKDVEYISTDIIIPNAYQPRKYFNEETIDELGESIKTYGIIQPLSVRKLEENKYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RRFRAA L EVPVI+ ++ +K S IA++EN+QR+DL+ LEEA Y LI E+ YTQ
Sbjct: 62 RRFRAATKIGLKEVPVIVIDICDKDSAAIALLENIQREDLSFLEEAEAYYNLIKEHEYTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+ +I+GK +S +AN LRILKL +R+ + + ++ HAR L+
Sbjct: 122 AQLANIIGKKQSTIANKLRILKLDEEIRKSVLENNLTERHARALLK 167
>gi|154502967|ref|ZP_02040027.1| hypothetical protein RUMGNA_00788 [Ruminococcus gnavus ATCC 29149]
gi|153796506|gb|EDN78926.1| hypothetical protein RUMGNA_00788 [Ruminococcus gnavus ATCC 29149]
Length = 311
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 73/141 (51%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P ++P + E + + SIK +G++
Sbjct: 10 LASVDDLFSTEEGRQDAKLEKIQEIPLSELHPFKNHPFKVKDDEAMMETADSIKQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDPEGGYELVAGHRRHRASELAEKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E A Y+ ++ + +
Sbjct: 130 SERAFAYKMKLNAMKHQGERV 150
>gi|332654682|ref|ZP_08420425.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
gi|332516646|gb|EGJ46252.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
Length = 308
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 85/192 (44%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P ++P + E + + SIK +G++
Sbjct: 10 LASVDDLFSTEEGRQDAKLEKIQEIPLSELHPFKNHPFKVKDDEAMMETADSIKQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDPEGGYELVAGHRRHRASELAEKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
E A Y+ + + + + +I + + I++
Sbjct: 130 SERAFAYKMKLDAIKHQGARTDLTSAQVGPKLTAAEKIAENSPDSKSQIKRFIRLTELIP 189
Query: 198 TLVSTSDPLSLA 209
L+ D +A
Sbjct: 190 ELMDMVDEKKIA 201
>gi|289677538|ref|ZP_06498428.1| ParB-like partition protein [Pseudomonas syringae pv. syringae FF5]
Length = 58
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ + ++ LE++++ ++G + I+H KGQ I+Y + ++L+ + + +
Sbjct: 3 AAEPVKTDPDISRLEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVLAHI 57
>gi|118443812|ref|YP_876982.1| spoOJ protein [Clostridium novyi NT]
gi|118134268|gb|ABK61312.1| spoOJ protein, putative [Clostridium novyi NT]
Length = 259
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 78/166 (46%), Positives = 116/166 (69%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ IS I+PN + PR YF + +++L +SI+++GIIQPL VR I++ Y++IAGE
Sbjct: 2 KKDIKYISTDIIIPNTYQPRKYFNEDTIDELGESIRTYGIIQPLSVRKIEDNKYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RRFRAAK L EVPVI+ ++ +K S IA++EN+QR+DLN LEEA YE LI E+ YTQ
Sbjct: 62 RRFRAAKKIGLKEVPVIVTDISDKDSAAIALLENIQREDLNFLEEAEAYENLIKEHKYTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
++ +I+GK +S +AN +RILKL +R+ + + ++ HAR L+
Sbjct: 122 AELANIIGKKQSTIANKIRILKLDKVIRQQVLENNLTERHARALLK 167
>gi|186474562|ref|YP_001863533.1| parB-like partition protein [Burkholderia phymatum STM815]
gi|184198521|gb|ACC76483.1| parB-like partition protein [Burkholderia phymatum STM815]
Length = 325
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
I++ +IVPNP PR F L +L +SI G++Q + VR + ++++A
Sbjct: 56 ESKGVDTEIAVGTIVPNPWQPRRQFNEAKLSELARSIAEAGLLQAVTVRRVGET-FQLVA 114
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RA K+ + + ++ ++ A++ENV R DL+ E A+ + SE+
Sbjct: 115 GERRWRAHKLLNRDSIRAVVIECTDQDMAAYALMENVTRDDLSDYEIAIAVRRAESEFP- 173
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
+ + ++G +R+ + L LP V+ +
Sbjct: 174 NRTRLAEVMGVTRNELYKFLAFDDLPDFVKRDLDLN 209
>gi|298484311|ref|ZP_07002474.1| ParB-family protein [Bacteroides sp. D22]
gi|298269558|gb|EFI11156.1| ParB-family protein [Bacteroides sp. D22]
Length = 570
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 94/177 (53%), Gaps = 1/177 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + +++ I P+ NPR F+ L +L +SIK G++QP+ VR I
Sbjct: 2 KTKANQSAAERNITMVALADIQPSGFNPRKRFDETSLYELAESIKRQGVLQPITVRPIGG 61
Query: 87 GLYKII-AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
I GERR+RA+ +A E+P I+ + ++ + E+AI EN+QRKD+ P+EEA Y+
Sbjct: 62 TDRYGIVFGERRYRASVIAGRDEIPAIVTELSDEEAEEMAITENLQRKDVTPVEEAAAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVST 202
+LI +T + + GK+ +++ L+ L + ++ +EI++ A +
Sbjct: 122 RLIESGRHTVQTLAQLFGKNENYIRTRLKFTALIPEIAALLDADEITISVAAEICRY 178
>gi|291524671|emb|CBK90258.1| ParB-like partition proteins [Eubacterium rectale DSM 17629]
Length = 295
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 116/272 (42%), Gaps = 23/272 (8%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
++ +T E I++ + +P + E +++ +SI+ HG++ P I R + +G Y
Sbjct: 22 EQPQTGTEQVQEIALSELHEFKGHPFKVLDDEKMQETMESIREHGVLMPGIARPMKDGGY 81
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAG RR A ++ L+ +P+ IR+ + + I + N+QR+D+ P E+A Y
Sbjct: 82 EIIAGHRRRHACELVGLTTMPMFIRDYTDDEATIIMVDSNIQREDILPSEKAKAYFMKYE 141
Query: 150 EYGYTQ--------NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+ +++G G+S V + + L ++ +M+ K++I + L
Sbjct: 142 AVKHQGKKGKGNSLDEVGETAGESAKTVQRYIYLAHLSDALLDMVDKKKIGIVQGVELSF 201
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
++ +V ++ V + V + + R +E+
Sbjct: 202 LTEQQQEWVQVVLEETGVIISTVQVSRLKEYGKSDELTLPMVRLILTEPKPIER------ 255
Query: 262 GLNISIKHRNNKGQFCIKY---ETNEQLKIIC 290
++IK + + +NEQ++ +
Sbjct: 256 --KVTIKAD----KISRYFPADYSNEQIENVI 281
>gi|309806381|ref|ZP_07700393.1| nucleoid occlusion protein [Lactobacillus iners LactinV 03V1-b]
gi|308167212|gb|EFO69379.1| nucleoid occlusion protein [Lactobacillus iners LactinV 03V1-b]
Length = 260
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 77/257 (29%), Positives = 141/257 (54%), Gaps = 7/257 (2%)
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFRAAKM 103
+IVPN + PR F E + L Q+I+ G++QP++VR I D+ Y+IIAGERR+RA K+
Sbjct: 2 DNIVPNRYQPRRAFNDETIAQLAQTIQEQGLLQPIVVRHILDSDKYEIIAGERRYRAVKL 61
Query: 104 ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVG 163
+ +P I+ ++ ++ +A++EN+QR++LNP++EA Y QL+ TQ + VG
Sbjct: 62 LKWATIPAIVNSMADEQVASLALIENLQRENLNPIDEAKAYAQLMKINNLTQEQLAHQVG 121
Query: 164 KSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS--TSDPLSLAQVIVSKKMSVRD 221
+++S++AN +R+LKL V+ + ++I+ H R L++ SD IV K ++V++
Sbjct: 122 RTQSYIANKIRLLKLTPKVQSFLVAQKITPRHGRALLTLSASDQDRAVSEIVKKDLTVKE 181
Query: 222 TEELVQEQDNKKEKRKKIFEGSREKEKYLT-DLEKKISSKVGL-NISIKHRNNKGQFCI- 278
TE + Q+ D + + + +T + ++ +IK + G
Sbjct: 182 TENMAQDIDRYFSNMGQEGATKAKASRKVTVKTGSDFTVQINTIKQAIKMVKDSGMIVKQ 241
Query: 279 -KYETNEQLKIICSLLG 294
+ ++ + KI +L
Sbjct: 242 HENKSKDSYKITIEILK 258
>gi|290769902|gb|ADD61672.1| putative protein [uncultured organism]
Length = 311
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 72/141 (51%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P ++P + E + + SIK +G++
Sbjct: 10 LASVDDLFSTEEGRQDAKLEKIQEIPLSELHPFRNHPFKVKDDEAMMETADSIKQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDPEGGYELVAGHRRHRASELAEKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E A Y+ + + +
Sbjct: 130 SERAFAYKMKLDAMKHQGERV 150
>gi|268610513|ref|ZP_06144240.1| ParB family protein [Ruminococcus flavefaciens FD-1]
Length = 273
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 1/213 (0%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
E +++ I+PNP+ PR+ FE + L +SI +GI+QPL VR I + +++I
Sbjct: 10 EKQVNKVLEVAVEDILPNPYQPRSDFEQSDISSLAESISQNGILQPLTVRRIGDK-FELI 68
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR RAAK + VP I+ ++ + S +A+VEN+QR+DL+ +EAL E+LI YG
Sbjct: 69 AGERRLRAAKSCEMEFVPCIVYDISQRESAILALVENIQREDLSFFDEALAIEKLIKYYG 128
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI 212
TQ D + +GK++S +AN LR+L+L R++I + E++ HAR L+ ++
Sbjct: 129 MTQEDAAAKLGKAQSTIANKLRLLRLTEDERKLIVQFELTERHARALLKLGSAEDRLNIL 188
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+ + E + D+ +K+ +
Sbjct: 189 EKVVHNKLNVERTEKLIDDYIGCQKEKNSYKKR 221
>gi|262377697|ref|ZP_06070916.1| ParB family protein [Acinetobacter lwoffii SH145]
gi|262307370|gb|EEY88514.1| ParB family protein [Acinetobacter lwoffii SH145]
Length = 303
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 64/282 (22%), Positives = 122/282 (43%), Gaps = 8/282 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + + E + + I I +P+ PR FE L++L SI G++QP+
Sbjct: 15 NTEKHQQAQKDNIKELKEFRRNVPIEDISRSPNQPRKVFEESLLKELADSIDEIGLLQPI 74
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
VR +DN Y++IAGERR RA ++ S + II + +N + + + EN++R+DL E
Sbjct: 75 TVRKLDNLKYELIAGERRLRAHQLLGKSVIEAIIIDANNVEASLLTLAENLKRQDLTDYE 134
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
+G L + + + + +G +R + L KLP ++ + E LG
Sbjct: 135 IFIGLNSLDEKLKKNKQRLANSLGLNREDMYKYLAYEKLPQAILNDLDVEPGLLGRTAAT 194
Query: 200 VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY---LTDLEKK 256
+ + + ++ E V+++ ++ K E ++ T + +K
Sbjct: 195 AFKKFLSDHIEQLSEAEKALLGAWEKVKDKKLEQSKVTAYAEKILSQDPGKLTTTSVVRK 254
Query: 257 IS--SKVGLNISIKHRNNKGQF---CIKYETNEQLKIICSLL 293
I K+ NI + + K I + QL+ L
Sbjct: 255 IEYAGKIAGNIKLNQKQLKVSLNISEIDEASLLQLEDFLKQL 296
>gi|258515634|ref|YP_003191856.1| parB-like partition protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779339|gb|ACV63233.1| parB-like partition protein [Desulfotomaculum acetoxidans DSM 771]
Length = 285
Score = 64.7 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
T + + + + P + PR F + + +L +SI+ G++QP+ VR +G+Y+I
Sbjct: 16 TSSTGSQVKELPLGKVNPRTNQPRKTFNDKKIGELAESIRERGVLQPIRVRPNGSGMYEI 75
Query: 92 IAGERRFRAAKMASLSEVP-VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS- 149
IAGERR+RA + L +P VI V + + A++EN+QR+DL E+A+ +++I
Sbjct: 76 IAGERRWRACNLIGLKTIPAVITEGVKDIEVMAEALIENIQREDLVAFEKAMAIKEMIEC 135
Query: 150 -----EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS--- 201
T G ++G +R V L ILKLP + E + +++ HAR L+
Sbjct: 136 QLALTGKKMTLEAAGKMLGLTRQRVCQYLGILKLPEHILEKFCQSDLNEMHARALIMLRG 195
Query: 202 -TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
L I + +S + E Q+ + + + + +K + L+K
Sbjct: 196 LIELQEKLIDDIETMGLSGQQAIEWAQQYLSDVPVKTSVHNLVSKSDKQMNKLKKD 251
>gi|210610574|ref|ZP_03288500.1| hypothetical protein CLONEX_00690 [Clostridium nexile DSM 1787]
gi|210152433|gb|EEA83439.1| hypothetical protein CLONEX_00690 [Clostridium nexile DSM 1787]
Length = 301
Score = 64.7 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 74/125 (59%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K+ E + I + P ++P + + E +E+ +S+K +GI+ P IVR +G Y
Sbjct: 20 KEESVSGEVVTSVPIDLLHPFKNHPFHVLDDEKMEETVESVKQYGILMPGIVRPYPDGGY 79
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+++AG RR+RA ++A L E+PVIIR++D+ ++ I + N+QR+D+ P E+A Y+
Sbjct: 80 EVVAGHRRWRACELAGLEEMPVIIRDIDDDTATVIMVDTNIQREDILPSEKAFAYKMKYE 139
Query: 150 EYGYT 154
+
Sbjct: 140 ALKHQ 144
>gi|167841606|ref|ZP_02468290.1| ParB-like partition protein [Burkholderia thailandensis MSMB43]
Length = 315
Score = 64.7 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ + IVPNP PR F L +L +SI+ G+I+P++VR + Y+I+AGERR+RA
Sbjct: 54 ELPVADIVPNPWQPRRIFNEAKLTELAESIRESGLIEPIVVRKV-VSGYQIVAGERRWRA 112
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
KM + +I +V + +A+VENV R L E A E+ + +
Sbjct: 113 HKMIGKEAIKAVIADVSDGDMAVLALVENVVRDGLTDYEIARSIRNTEKEFP-NRKRMAE 171
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKE 189
+G SRS L LP V + + +
Sbjct: 172 ALGISRSEFYRYLAFGDLPEFVIKDLDLQ 200
>gi|166033528|ref|ZP_02236357.1| hypothetical protein DORFOR_03254 [Dorea formicigenerans ATCC
27755]
gi|166026713|gb|EDR45470.1| hypothetical protein DORFOR_03254 [Dorea formicigenerans ATCC
27755]
Length = 311
Score = 64.7 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 70/148 (47%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P ++P + E + + SIK +G++
Sbjct: 10 LASVDDLFSTEEGRQDAKLEKIQEIPLSELHPFKNHPFKVKDDEAMMETADSIKQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDPEGGYELVAGHRRHRASELADKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKS 165
E A Y+ +
Sbjct: 130 SERAFAYKMKLEAMKRQAGRPSKENCSQ 157
>gi|240146477|ref|ZP_04745078.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|257201382|gb|EEU99666.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
Length = 295
Score = 64.7 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 59/303 (19%), Positives = 122/303 (40%), Gaps = 35/303 (11%)
Query: 1 MSN--NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
MS + +K +L R L G +K + E I++ + +P
Sbjct: 1 MSKTGSAAKVKLNR-FDDLFGT---------EKLQIGTEQVQEIALSELHEFKGHPFKVL 50
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ E +++ +SIK HG++ P I R + +G Y+IIAG RR A ++ L+ +P+ IR+ +
Sbjct: 51 DDEKMQETVESIKEHGVLMPGIARPMKDGGYEIIAGHRRRHACEIVGLATMPMFIRDYTD 110
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND--------IGSIVGKSRSHVA 170
+ I + N+QR+D+ P E+A Y + +G G+S V
Sbjct: 111 DEATIIMVDSNIQREDILPSEKAKAYFMKYEAVKHQGKRGKGNSLDEVGETAGESAKTVQ 170
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
+ + L ++ +M+ K++I + L ++ +V ++ + +
Sbjct: 171 RYIYLAHLSDALLDMVDKKKIGILQGVELSFLTEQQQEWVQVVLEETGMIISTVQASRLK 230
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKY---ETNEQLK 287
+ + R +E+ ++IK + + +NEQ++
Sbjct: 231 EHGKSDELTLPMVRLILTEPKPIER--------KVTIKAD----KISRYFPEDYSNEQIE 278
Query: 288 IIC 290
+
Sbjct: 279 NVI 281
>gi|29171484|ref|NP_808668.1| ParB family partitioning protein [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855977|gb|AAO59034.1| partion protein, ParB family [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 294
Score = 64.7 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 116/260 (44%), Gaps = 13/260 (5%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + P + + + +++ IV +P PR F+ LEDL SI++ G+ QP+
Sbjct: 9 SESPQLQVPNSEAASSRTAIHILNVDQIVKSPFQPRLVFDQAALEDLGTSIQTIGLGQPI 68
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR + NGL+++I GERR+RA+K+ + +++ + + ++ +A+ +N Q + +
Sbjct: 69 LVRPLPNGLFELIGGERRWRASKLIGNMTIEAMVKPMSDDLAMLLALTDNDQEDLTDYEK 128
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE-------EIS 192
Y L + + + +G + S ++ +L++ +LP S+R ++
Sbjct: 129 ARSYYCLLKNGEDSSMRALARRLGTNHSVISRLLQLTQLPESIRTILDGHPALITANYAK 188
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+ ++ +++ + + S + +L++ + + + + + +
Sbjct: 189 DFKDLSTINEDLVVNVVEKMASTGLPQEAALKLIRREVDSLSRPEAKQAKKSAVD-GIGT 247
Query: 253 LEKKISSKVGLNISIKHRNN 272
L +G + +K
Sbjct: 248 L-----RILGDRVEVKCAKG 262
>gi|188588117|ref|YP_001922714.1| protein YyaA [Clostridium botulinum E3 str. Alaska E43]
gi|251777993|ref|ZP_04820913.1| protein YyaA [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|188498398|gb|ACD51534.1| protein YyaA [Clostridium botulinum E3 str. Alaska E43]
gi|243082308|gb|EES48198.1| protein YyaA [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 260
Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 76/200 (38%), Positives = 118/200 (59%), Gaps = 1/200 (0%)
Query: 48 VPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLS 107
VPN + PR YF E +E+L QSIK HGIIQP+ VR I Y+++AGERR RAAK+A L
Sbjct: 14 VPNLYQPRKYFNEEAIEELSQSIKQHGIIQPITVRKIGET-YELVAGERRLRAAKVAELD 72
Query: 108 EVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRS 167
VP I ++ + S EIA++EN+QR+DLN +EEA Y L++++ +TQ D+ +GK +S
Sbjct: 73 VVPCNIVDITDSESAEIALLENLQREDLNYIEEAEAYSNLLNDHNFTQEDLAKRIGKKQS 132
Query: 168 HVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQ 227
+AN LR+LKL VR+M + +++ H+R L+S + +V+ + + +
Sbjct: 133 TIANKLRLLKLDPKVRQMCLENKLTERHSRALLSLPNADLQLKVVSKVVNDGLNVKNTEE 192
Query: 228 EQDNKKEKRKKIFEGSREKE 247
+ + K +
Sbjct: 193 LINKELLKLAGKQLNKKRTN 212
>gi|225376779|ref|ZP_03754000.1| hypothetical protein ROSEINA2194_02421 [Roseburia inulinivorans DSM
16841]
gi|225211405|gb|EEG93759.1| hypothetical protein ROSEINA2194_02421 [Roseburia inulinivorans DSM
16841]
Length = 308
Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 85/192 (44%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P ++P + E + + SIK +G++
Sbjct: 10 LASVDDLFSTEEGRQDAKLEKIQEIPLSELHPFKNHPFKVKDDEAMMETADSIKQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDPEGGYELVAGHRRHRASELADKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
E A Y+ + + + + +I + + I++
Sbjct: 130 SERAFAYKMKLDAIKHQGARTDLTSAQVGPKLTAAEKIAENSPDSKSQIKRFIRLTELIP 189
Query: 198 TLVSTSDPLSLA 209
L+ D +A
Sbjct: 190 ELLDMVDEKKIA 201
>gi|307149695|ref|YP_003891003.1| ParB-like partition protein [Cyanothece sp. PCC 7822]
gi|306986761|gb|ADN18638.1| parB-like partition protein [Cyanothece sp. PCC 7822]
Length = 326
Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/119 (46%), Positives = 80/119 (67%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
E T I I I N PR YF+ + LE+L +SI HGI+QPL+VR +++G
Sbjct: 19 AESLAPTTSTPDSTIPITEIHLNKQQPRRYFDPQALEELIKSISQHGILQPLLVRPLEDG 78
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
Y+++AGERR+RAA L+EVPV+IR + N+ +L++A++EN+QR+DLNP+EE G Q
Sbjct: 79 GYELVAGERRYRAATEVGLTEVPVVIRELSNEQALQLALIENLQREDLNPVEETEGILQ 137
>gi|260170448|ref|ZP_05756860.1| hypothetical protein BacD2_01138 [Bacteroides sp. D2]
gi|315918801|ref|ZP_07915041.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313692676|gb|EFS29511.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 645
Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYK 90
E + I I P+ +N R F+++ L++L QSI HG+IQP+ +R Y+
Sbjct: 30 ENGVKKAVNIPSDLIEPSNYNARKTFDADALKELAQSISVHGLIQPITLRRKGEKGEHYE 89
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
II GERRFRA +M L+E+P I+R ++ + +++I EN+QR+D+ P+E A Y++LI
Sbjct: 90 IICGERRFRACRMLKLAEIPAIVREATDEQAYDLSISENLQREDVPPMEAAKAYKRLIDT 149
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQ 210
Y + GKS HV L++ +L + +++ +++ + +
Sbjct: 150 KRYDVASLALQFGKSEKHVYQTLKLCELIKGIANLVKAGKLTASAGIVISKYDKKIQAEI 209
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
+ + L ++ + + + Y LE + K
Sbjct: 210 L----------KDRLGEDGQGEWCSISAGVLDGKIQSCYTNHLENYLFDK 249
>gi|254884229|ref|ZP_05256939.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254837022|gb|EET17331.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 573
Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 1/197 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGL 88
+ +S+ +I P+ +NPR F+ GL++L +SIK G++QP+ VR I D
Sbjct: 4 ANQSAAERNITLVSVANIQPSNYNPRKRFDETGLDELAESIKQQGVLQPITVRPIADTDR 63
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+I+ GERR+RA+ +A L EVP II + ++ + E+A+ EN+QRKD+ P EEA Y+QLI
Sbjct: 64 YEIVFGERRYRASVIAGLEEVPAIISELSDEEAQEMAVTENLQRKDVTPTEEANAYKQLI 123
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
+T + + GKS +++ L L + E++ + I++ A + + +
Sbjct: 124 DSGRHTVETLSVLFGKSENYIRTRLNFSTLIPELAELLDADVITISVASEICRYGEDVQR 183
Query: 209 AQVIVSKKMSVRDTEEL 225
K ++
Sbjct: 184 EVYEKYLKEGIQHYSSW 200
>gi|313901360|ref|ZP_07834846.1| nucleoid occlusion protein [Clostridium sp. HGF2]
gi|312953848|gb|EFR35530.1| nucleoid occlusion protein [Clostridium sp. HGF2]
Length = 254
Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 129/214 (60%), Gaps = 3/214 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
+ I + PNP+ PR F+ E L DL QSI+ +G+IQP+ VR +D Y+IIAGERRFR
Sbjct: 5 RIVDIDLVEPNPYQPRLEFDDEALMDLAQSIRENGLIQPITVREMDGR-YQIIAGERRFR 63
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
A K+ +VPV+I + + E+A+VEN+QR++L+ +EEA Y +++ G Q+ +
Sbjct: 64 ALKLNGAVDVPVLIMDANEVQMAEMALVENIQRENLSAIEEAKSYVEIMKYSGLNQSQLA 123
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV--STSDPLSLAQVIVSKKM 217
VGKS+S +AN +R+L L V+E + ++IS HAR L+ + IV K M
Sbjct: 124 LRVGKSQSSIANKIRLLNLDEDVQEAVSTKKISERHARALIGLDEEKQHDALEKIVKKGM 183
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+V TE++++EQ K+++KK+ K +
Sbjct: 184 TVAQTEKMLKEQAQPKKEKKKVMLKGISKNIKIA 217
>gi|309776223|ref|ZP_07671214.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
3_1_53]
gi|308916174|gb|EFP61923.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
3_1_53]
Length = 311
Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 70/148 (47%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P ++P + E + + SIK +G++
Sbjct: 10 LASVDDLFSTEEGRQDAKLEKIQEIPLSELHPFRNHPFKVKDDEAMMETADSIKQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDPEGGYELVAGHRRHRASELAEKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKS 165
E A Y+ +
Sbjct: 130 SERAFAYKMKLEAMKRQAGRPSKENCSQ 157
>gi|326793313|ref|YP_004311134.1| parB-like partition protein [Clostridium lentocellum DSM 5427]
gi|326544077|gb|ADZ85936.1| parB-like partition protein [Clostridium lentocellum DSM 5427]
Length = 266
Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 133/212 (62%), Gaps = 4/212 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ ++I ++PNP+ PR F L++L SI HG++QP+ VR I N Y++IAGERR
Sbjct: 6 KIEHVAIDRVIPNPYQPRKVFSDAALQELADSILEHGLMQPITVRMIGNS-YELIAGERR 64
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
+A+K+A L +P +I V K S +A++EN+QR++LN LEE+ Y +++ +YGYTQ +
Sbjct: 65 LKASKLAGLETIPAVIVEVTTKDSAVLALIENLQRENLNFLEESQAYHKIMQDYGYTQQE 124
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVS 214
+ + +GK++S VAN LR+LKL V++++ + ++ HAR L + L + ++
Sbjct: 125 LAATLGKNQSTVANKLRVLKLSPMVQKLLVENNLTERHARALLKLPNEEYQLMALEKVIK 184
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
++++V+ TE+++++ K I + +K
Sbjct: 185 QELNVKRTEQIIEQMLVDVTKEDMIKHKANQK 216
>gi|331091964|ref|ZP_08340796.1| hypothetical protein HMPREF9477_01439 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402863|gb|EGG82430.1| hypothetical protein HMPREF9477_01439 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 301
Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 74/125 (59%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K+ E + I + P ++P + + E +E+ +S+K +GI+ P IVR +G Y
Sbjct: 20 KEETVSGEVVTSVPIDLLHPFKNHPFHVQDDEKMEETVESVKQYGILMPGIVRPYPDGGY 79
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+++AG RR+RA ++A L E+PVIIR++D+ ++ I + N+QR+D+ P E+A Y+
Sbjct: 80 EVVAGHRRWRACELAGLEEMPVIIRDIDDDTATVIMVDTNIQREDILPSEKAFAYKMKYE 139
Query: 150 EYGYT 154
+
Sbjct: 140 ALKHQ 144
>gi|297618519|ref|YP_003703678.1| parB-like partition protein [Syntrophothermus lipocalidus DSM
12680]
gi|297146356|gb|ADI03113.1| parB-like partition protein [Syntrophothermus lipocalidus DSM
12680]
Length = 280
Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 83/248 (33%), Positives = 138/248 (55%), Gaps = 24/248 (9%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLC 67
R LGRG I + I NP+ PR + L DL
Sbjct: 7 RVLGRG--------------------VARREVINIGVEEIRGNPYQPRQAIDELELRDLA 46
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
QSI+ +G+IQP+IVR + G Y+++AGERR +A MA EVP I+ +++ + + ++++
Sbjct: 47 QSIQEYGVIQPIIVRKMKEG-YQLVAGERRLKACMMAGWKEVPAIVCDMEEEEAAAVSLI 105
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+QRK+LN LEEA Y +LI E+G TQ ++ VGKS++ +AN LR+L+LP V++++R
Sbjct: 106 ENLQRKELNFLEEARAYARLIGEFGLTQEELARRVGKSQAAIANKLRLLRLPGEVQDLLR 165
Query: 188 KEEISLGHARTLVS---TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ +S HAR L+ + + + + I+ K+++V++ E L+ + + K E R
Sbjct: 166 QGGVSERHARALLKLDSVEEQVEVVRKIIEKELTVKEAEALIDKIRQGISREIKGGEKRR 225
Query: 245 EKEKYLTD 252
++ D
Sbjct: 226 SLSMFIRD 233
>gi|295701143|ref|YP_003610144.1| parB-like partition protein [Burkholderia sp. CCGE1002]
gi|295441466|gb|ADG20633.1| parB-like partition protein [Burkholderia sp. CCGE1002]
Length = 327
Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 15/248 (6%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ +++ IVPNP PR F+ L L +SI+ G++QP++VR +G +I+A
Sbjct: 54 EKSGAASEVTVADIVPNPWQPRKVFDDAKLRQLAESIREAGLVQPIVVRRAAHGH-QIVA 112
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RA KM + +I ++ ++ +A+VENV R DL+ E A E+
Sbjct: 113 GERRWRAHKMIDKDTIKAVIIDLSDEEMAMLALVENVVRDDLSDYEIARSIRSTEKEFP- 171
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQ 210
+ + +G SRS + L +LP V + + + LG + D A
Sbjct: 172 NRKRMAEGLGISRSELYRFLAFSELPDFVVKDLDIQPRLLGATAAEGLVSVLRDKNGKAV 231
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI----------SSK 260
+ + + EL Q + + K+ + + +EK
Sbjct: 232 DVAREVWGRVVSGELDQSKLVRTIKQALQSGDNGSRSVSDRSIEKIFAGKNQAGSITKDA 291
Query: 261 VGLNISIK 268
+G + I+
Sbjct: 292 LGFTVKIR 299
>gi|261366548|ref|ZP_05979431.1| ParB family protein [Subdoligranulum variabile DSM 15176]
gi|282571365|gb|EFB76900.1| ParB family protein [Subdoligranulum variabile DSM 15176]
Length = 311
Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 69/137 (50%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P +P + + + SI+ +G++
Sbjct: 10 LASVDDLFSTEESRADAQREKVLEIPLSELHPFKDHPFKVKDDGAMMETADSIRQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R NG Y+++AG RR RA+++A +PVI+R++D+ + I + N+QR+ L P
Sbjct: 70 PAIARPDPNGGYELVAGHRRHRASELAGKDTMPVIVRDLDDDQATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYT 154
E A Y+ + +
Sbjct: 130 SERAFAYKMKLEAMNHQ 146
>gi|45655850|ref|YP_003659.1| hypothetical protein LIC20275 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45602821|gb|AAS72296.1| ParB [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
Length = 281
Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 67/297 (22%), Positives = 128/297 (43%), Gaps = 27/297 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS+ + L +L + + E + + I + I+P+ + PR
Sbjct: 1 MSSKSKR------LGSL---------ADVFQAEKLEGTVRKIRLDKILPSENQPRQD-RK 44
Query: 61 EGLEDLCQSIKSHGIIQPLIV--RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+G++DL +S++ G++QP+IV + ++ Y+I+AGERR+ AAK +EV I + D
Sbjct: 45 KGVDDLARSLEKDGLLQPIIVTKQNPEDENYRIVAGERRYHAAKQLDWTEVECKILDRDE 104
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
K + +AI+EN+QR++L+P EE L + + YT ++G++ GKSRS++ +L I L
Sbjct: 105 KETFRLAIIENLQRENLSPYEEIEAMSHLKTSFKYTDQELGTLFGKSRSYMTELLGISSL 164
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ I + L+ + + V++ + + +
Sbjct: 165 SKEELRSCKEAGIEGKNL--LIQAVAASRKGTFFEFLNLFQTGALKTVKDAKSFNREEEN 222
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+F K++ K +G I L I L+ +
Sbjct: 223 LFTPKIATNTNSKTSNSKLTEY-------KITKKQGLIQITSHDEALLGEILKLIKK 272
>gi|283796505|ref|ZP_06345658.1| ParB family protein [Clostridium sp. M62/1]
gi|291075919|gb|EFE13283.1| ParB family protein [Clostridium sp. M62/1]
Length = 311
Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 71/141 (50%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P +P + E + + SIK +G++
Sbjct: 10 LASVDDLFSTEESRADAQREKIVEIPLSELHPFKGHPFKVKDDEAMMETADSIKQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDPEGGYELVAGHRRHRASELAEKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E A Y+ + + +
Sbjct: 130 SERAFAYKMKLEAMKHQGERV 150
>gi|257437751|ref|ZP_05613506.1| ParB family protein [Faecalibacterium prausnitzii A2-165]
gi|257199766|gb|EEU98050.1| ParB family protein [Faecalibacterium prausnitzii A2-165]
Length = 197
Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 117/200 (58%), Gaps = 7/200 (3%)
Query: 103 MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
MA L+E PV++++V ++ ++E+A+VEN+QR+DL+P+EEALG +L++ TQ +
Sbjct: 1 MAGLTEAPVVVKDVTDEQAMELALVENLQREDLDPVEEALGIRELMTRCDLTQEQAARKL 60
Query: 163 GKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL---VSTSDPLSLAQVIVSKKMSV 219
GKSRS +AN LR+L LP +V E+++ ++ GHA+ + + AQ+I +++V
Sbjct: 61 GKSRSALANSLRLLNLPETVLELLKGGFLTTGHAKVVLGLPTPELQEQAAQIIADHELNV 120
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIK 279
R E L ++ ++ + ++E+ + +G +++ + + KG+ +
Sbjct: 121 RQAEALCKKLAKPPKEPVEPAPRGTLP----VEVEESLKQALGSEVNVAYHDGKGKLTVH 176
Query: 280 YETNEQLKIICSLLGENDFE 299
+ ++EQLK +LLG+ E
Sbjct: 177 FYSDEQLKAFANLLGQYQVE 196
>gi|315305246|ref|ZP_07875204.1| partition protein ParB homolg [Listeria ivanovii FSL F6-596]
gi|313616508|gb|EFR89382.1| partition protein ParB homolg [Listeria innocua FSL S4-378]
gi|313626385|gb|EFR95560.1| partition protein ParB homolg [Listeria ivanovii FSL F6-596]
Length = 54
Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 27/45 (60%)
Query: 249 YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 3 FIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 47
>gi|24217427|ref|NP_714910.1| ParB family protein [Leptospira interrogans serovar Lai str. 56601]
gi|24202515|gb|AAN51925.1| ParB [Leptospira interrogans serovar Lai str. 56601]
Length = 281
Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 67/297 (22%), Positives = 128/297 (43%), Gaps = 27/297 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS+ + L +L + + E + + I + I+P+ + PR
Sbjct: 1 MSSKSKR------LGSL---------ADVFQAEKLEGTVRKIRLDKILPSENQPRQD-RK 44
Query: 61 EGLEDLCQSIKSHGIIQPLIV--RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+G++DL +S++ G++QP+IV + ++ Y+I+AGERR+ AAK +EV I + D
Sbjct: 45 KGVDDLARSLEKDGLLQPIIVTKQNPEDENYRIVAGERRYHAAKQLDWTEVECKILDRDE 104
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
K + +AI+EN+QR++L+P EE L + + YT ++G++ GKSRS++ +L I L
Sbjct: 105 KETFRLAIIENLQRENLSPYEEIEAMSHLKTSFKYTDQELGTLFGKSRSYMTELLGISSL 164
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ I + L+ + + V++ + + +
Sbjct: 165 SKEELRSCKEAGIEGKNL--LIQAVAASRKGTFFEFLNLFQTGALKTVKDAKSFNREEEN 222
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+F K++ K +G I L I L+ +
Sbjct: 223 LFTPKIAANTNSKTSNSKLTEY-------KITKKQGLIQITSHDEALLGEILKLIKK 272
>gi|257091547|ref|YP_003165190.1| hypothetical protein CAP2UW1_4611 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048556|gb|ACV37743.1| hypothetical protein CAP2UW1_4611 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 319
Score = 63.9 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 98/256 (38%), Gaps = 3/256 (1%)
Query: 25 IDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI 84
+ + I + I NP+N R + + + +L +SI ++G +QP I
Sbjct: 41 SSKVAAAGDKRSGRFERIPVDLIDANPYNARRIYRPQRIGELSESIVANGQMQPGIATMR 100
Query: 85 DNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALG 143
D G Y ++AG R A + A L + V++ + ++ E + EN +R + L++A+
Sbjct: 101 DGGRYVLVAGHYRLAAIRQAGLPTMDVMVHDGLSDRDLFEYSYRENSERDSQSALDDAMA 160
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS 203
+ +++ Y + V + N + S + + L
Sbjct: 161 WREMLDRNVYPNETALAGVVRKSLANVNRTLSILKLSGTVLDLVGQNPETFPMSCLSELV 220
Query: 204 DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
++A + + + + + ++ + + + SR++++ + +S G
Sbjct: 221 LLEAVAGTKTALVFAEKVGQGEIGRKEIIEARMRIETPKSRKRKEISRQYKIHVSD--GT 278
Query: 264 NISIKHRNNKGQFCIK 279
I + G+ +
Sbjct: 279 QIGALKEWDSGRVSLD 294
>gi|294146902|ref|YP_003559568.1| ParB-like protein [Sphingobium japonicum UT26S]
gi|292677319|dbj|BAI98836.1| ParB-like protein [Sphingobium japonicum UT26S]
Length = 341
Score = 63.5 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 82/231 (35%), Gaps = 2/231 (0%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ P + + I P+P R F+ ++ L +IK G++QP+
Sbjct: 19 DAMDFSAVPANTEFKAAGRFQRLPLDDIDPDPTQVRREFDQAEIDALAATIKDRGLLQPI 78
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+V NG Y I GERR+RA + ++ ++ D + + + +++ L
Sbjct: 79 VVAPTSNGRYIIRYGERRYRACRQLGFDQIDTVLDQADAERDIGLDQFLENEQRQALSLA 138
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
E + + + D+ + + K S V + + LP + ++ A
Sbjct: 139 ERVSFIASRVSDTLSTKDLAARIAKPHSEVKRLYSLRTLPEDILAALKNCSPRAAVAIKH 198
Query: 200 VSTSDPLSLAQVIVSKKMSVRD--TEELVQEQDNKKEKRKKIFEGSREKEK 248
D + + + + + L Q + +E+ + +
Sbjct: 199 AIELDEQATRNFVAANENPTAAACEQFLATLQGSPEEETAQAGAAKAIDDP 249
>gi|317476147|ref|ZP_07935399.1| ParB-like partition protein [Bacteroides eggerthii 1_2_48FAA]
gi|316907785|gb|EFV29487.1| ParB-like partition protein [Bacteroides eggerthii 1_2_48FAA]
Length = 581
Score = 63.5 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 104/177 (58%), Gaps = 1/177 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
++ +++ +I P+ +NPR YF+ L +L +SI+ G++QP+ VR ID
Sbjct: 2 ETANIQSVAEKNIVSVALANIQPSSYNPRKYFDEVSLAELAESIRQQGVLQPIGVRPIDE 61
Query: 87 G-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
++I+ GERR+RA+ +A L E+ I+ NV ++++ E+A+ EN+QRKD+ P+EEA Y+
Sbjct: 62 SGKFEIVFGERRYRASLLAGLEEISAILLNVSDETAAEMAVTENLQRKDVTPIEEANAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVST 202
+LI Y + GK+ +++ L+ + L + E++ K+EI++ A +
Sbjct: 122 KLIESGRYDVQSLAVQFGKNENYIRTRLKFVSLIPEIAELLEKDEITISVASEICRY 178
>gi|114883641|ref|YP_740331.1| ParB-like partition protein [Plasmid pLB1]
gi|113734282|dbj|BAF30458.1| ParB-like partition protein [Plasmid pLB1]
Length = 339
Score = 63.5 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 2/231 (0%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ P + + I P+P R F+ ++ L +IK G++QP+
Sbjct: 19 DAMDFSAVPANTEFKAAGRFQRLPLDDIDPDPTQVRREFDQAEIDALAATIKDRGLLQPI 78
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+V NG Y I GERR+RA + ++ ++ D + + + +++ L
Sbjct: 79 VVAPTSNGRYIIRYGERRYRACRQLGFDQIDTVLDQADAERDIGLDQFLENEQRQALSLA 138
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
E + + + D+ + + K S V + + LP + ++ A
Sbjct: 139 ERVSFIASRVSDTLSTKDLAARIAKPHSEVKRLYSLRTLPEDILAALKNCSPRAAVAIKH 198
Query: 200 VSTSDPLSLAQVIVSKKMSVRD--TEELVQEQDNKKEKRKKIFEGSREKEK 248
D + + + + + L Q + E+ + +
Sbjct: 199 AIELDEQATRNFVAANENPTAAACEQFLATLQGSPDEESAQAGAAKAIDDP 249
>gi|325264646|ref|ZP_08131376.1| hypothetical protein HMPREF0240_03653 [Clostridium sp. D5]
gi|324030308|gb|EGB91593.1| hypothetical protein HMPREF0240_03653 [Clostridium sp. D5]
Length = 309
Score = 63.5 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 71/137 (51%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P ++P + E + + SIK +G++
Sbjct: 10 LASVDDLFSTEEGRQDAKLEKIQEIPLTELHPFKNHPFKVKDDEAMMETADSIKQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDPEGGYELVAGHRRHRASELAEKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYT 154
E A Y+ + +
Sbjct: 130 SERAFAYKMKLEAVKHQ 146
>gi|224024772|ref|ZP_03643138.1| hypothetical protein BACCOPRO_01500 [Bacteroides coprophilus DSM
18228]
gi|224017994|gb|EEF76006.1| hypothetical protein BACCOPRO_01500 [Bacteroides coprophilus DSM
18228]
Length = 577
Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL-IVRAIDNGLYK 90
+ +++ I P+ +NPR +F+ L +L SI+ G++QP+ + + G ++
Sbjct: 7 QSVEEKKISMVALADIQPSGYNPRKHFDEASLVELADSIRQQGVLQPIGVRPINEIGKFE 66
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
I+ GERR+RA+ MA ++E+P I NV ++ + E+A+ EN+QRKD+ P+EEA Y++LI
Sbjct: 67 IVFGERRYRASLMADMTEIPATILNVSDEVAEEMAVTENLQRKDVTPIEEANAYQKLIDS 126
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
+ + GK+ +++ L+ L + E++ K+E+++ A + + +
Sbjct: 127 GRHDIKSLAVQFGKNETYIRTRLKFTALIPEIAELLEKDELTISVASEICRYGEDIQR 184
>gi|225028345|ref|ZP_03717537.1| hypothetical protein EUBHAL_02617 [Eubacterium hallii DSM 3353]
gi|224954391|gb|EEG35600.1| hypothetical protein EUBHAL_02617 [Eubacterium hallii DSM 3353]
Length = 293
Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 107/241 (44%), Gaps = 8/241 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I I P ++P + E ++DL +S++ +G++ P
Sbjct: 6 GEKIKLASIDELLGVVNEESAMEIEISKIHPFKNHPFKVLDDEKMQDLVESVRINGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R DN Y++++G RR AA++A L+ +P I+R + + ++ + N+QR++L P
Sbjct: 66 VLLRMDDNEEYEMVSGHRRMHAAQLAGLTTIPAIVRELSDDDAVIAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
E+A Y+ + + + +S + + V E R + +
Sbjct: 126 EKAFAYKMKLDAMKRQGSRTDLTLCQSGTKSRTDQLLG---EQVGESARSVQRYIRLTEL 182
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
+ D + ++ + + + ++ VQE + I + K K + L +++
Sbjct: 183 IPELLDLVDNKKLQFTVAVDISYIDKEVQEW-----IYEYISDTGFIKPKQIAALRNQLN 237
Query: 259 S 259
Sbjct: 238 D 238
>gi|309789515|ref|ZP_07684098.1| stage 0 sporulation protein J [Oscillochloris trichoides DG6]
gi|308228481|gb|EFO82126.1| stage 0 sporulation protein J [Oscillochloris trichoides DG6]
Length = 288
Score = 63.2 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ +T I I I PNP R F L++L SI+ HG
Sbjct: 14 ADDLARERDLAALVQTQRTVVQEIGIERIRPNPFQARQSFTD--LDELADSIRLHGFTTR 71
Query: 79 LIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
L VR ++++ GERR RAA M + VP I + + +EI + EN+QR+DL+
Sbjct: 72 LRVRPHPSLPNTFELVYGERRLRAAGMVGYTSVPCEIADHSDADLIEIGLAENIQRRDLD 131
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
PLEEA + LI + GY+ + +GK +S+V + L +L++PS V+EM+ + +L A
Sbjct: 132 PLEEARAFMSLIGQRGYSVRGLAERIGKDKSYVESRLALLRMPSDVQEMVAERPDTLRSA 191
Query: 197 RTLVS 201
R +
Sbjct: 192 REIAK 196
>gi|257879396|ref|ZP_05659049.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|323142542|ref|ZP_08077358.1| ParB-like protein [Phascolarctobacterium sp. YIT 12067]
gi|257813624|gb|EEV42382.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|295100964|emb|CBK98509.1| ParB-like partition proteins [Faecalibacterium prausnitzii L2-6]
gi|322412975|gb|EFY03878.1| ParB-like protein [Phascolarctobacterium sp. YIT 12067]
Length = 308
Score = 63.2 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 101/259 (38%), Gaps = 4/259 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + + + E E I + + P +P + E + +S++ G++
Sbjct: 10 LKGYDDIFSTDQSRAEAQQERVQEIPLSELHPFEGHPFRVVDDEEMMKTAESVRDFGVLT 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P IVR +G Y+I++G RR RA+++A +P I+R++D+ +++ + + N+QR+ + P
Sbjct: 70 PAIVRPDPDGGYEIVSGHRRHRASELAGKETMPAIVRDLDDDAAIILMVDANLQRESILP 129
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
E A Y+ + + G + S V L+ + + R +
Sbjct: 130 SERAFAYKMKLDAIKHQ----GQRTDLTSSQVGMKLQAMDIVGQEAGESRNQVHRYIRLT 185
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
L+ + I +++D S + + + L ++
Sbjct: 186 ELIPELLDMVDTGQIKFNPAVELSYLASEEQKDFLSAMDYAQAAPSLSQAQRIKKLAQEG 245
Query: 258 SSKVGLNISIKHRNNKGQF 276
+ I + KG+
Sbjct: 246 ECTLDAMCEIMNEIKKGEL 264
>gi|315284156|ref|ZP_07872075.1| partition protein ParB homolg [Listeria marthii FSL S4-120]
gi|313612201|gb|EFR86424.1| partition protein ParB homolg [Listeria marthii FSL S4-120]
Length = 55
Score = 63.2 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 27/45 (60%)
Query: 249 YLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ + E ++ K G +SIK R+ KG+ I++ +++ L I +L
Sbjct: 4 FIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL 48
>gi|188591568|ref|YP_001796167.1| Plasmid partition protein B [Cupriavidus taiwanensis]
gi|170938963|emb|CAP63970.1| Plasmid partition protein B [Cupriavidus taiwanensis LMG 19424]
Length = 323
Score = 63.2 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 12/269 (4%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
I++ IVPNP PR F L DL +SI+ G++QP++VR + G Y+I+A
Sbjct: 53 EAAGVASLIAVADIVPNPWQPRRVFNDSKLADLAESIREVGLMQPIVVRRAEMG-YQIVA 111
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR+RA KM + ++ + +A+VENV R DL+ E AL Q E+
Sbjct: 112 GERRWRAHKMLGADTIKAVVAEPSDADMAVLALVENVSRDDLSDYEIALSIRQTEKEFP- 170
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
++ + +G SRS + L +LP V + ++ + + +++ +
Sbjct: 171 SRARLAEALGLSRSGLYRFLSFAQLPDYVIRDL---DLQPTLLGGTAAEAIVMTIRKYGE 227
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFE--GSREKEKYLTDLEKKISSKVGLN---ISIK 268
+ + ++ LV + K + +R + + E+ I SI
Sbjct: 228 AGDAAAKEIWPLVASGKMDQGKAANAIKALATRRVDAANSASERSIDKFFAGKEHAGSIT 287
Query: 269 HRNNKGQFCIKYETNEQ-LKI-ICSLLGE 295
N IK+ + L+ I L+ E
Sbjct: 288 KDANGFTVKIKFGALSEALENQIRQLISE 316
>gi|307591394|ref|YP_003900193.1| parB-like partition protein [Cyanothece sp. PCC 7822]
gi|306986248|gb|ADN18127.1| parB-like partition protein [Cyanothece sp. PCC 7822]
Length = 301
Score = 63.2 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/116 (40%), Positives = 75/116 (64%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ E + I +I P PR YF + ++L SI+ HGI+QP++VR +D G
Sbjct: 15 SPEVEETSVQPVSLPIDAIQTRPSQPRRYFSPQAHQELVDSIRQHGILQPILVRPLDGGT 74
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
Y+++AGERR+RAA A L+ +PV+I+ + + + E+ ++EN+QR++LNPLEEA G
Sbjct: 75 YELVAGERRYRAAIDAGLTNIPVLIKQLSDGEASELTLIENLQRENLNPLEEAEGI 130
>gi|301165224|emb|CBW24795.1| putative ParB-family protein [Bacteroides fragilis 638R]
Length = 570
Score = 63.2 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 98/183 (53%), Gaps = 1/183 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + +++ +I P+ NPR F+ L +L +SIK G++QP+ VR +D
Sbjct: 2 KTKANQSAAERNITMVALANIQPSGFNPRKRFDETSLYELAESIKRQGVLQPITVRPVDG 61
Query: 87 GLYKII-AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
I GERR+RA+ +A E+P I+ + ++ + E+AI EN+QRKD+ P+EEA Y+
Sbjct: 62 TDRYGIVFGERRYRASVIAGRDEIPAIVSELSDEEAEEMAITENLQRKDVTPVEEAAAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+LI +T + + GK+ +++ L+ L + ++ +EI++ A + +
Sbjct: 122 RLIESGRHTVQTLAVLFGKNENYIRTRLKFTALIPEIAALLDADEITISVAAEICRYGED 181
Query: 206 LSL 208
+
Sbjct: 182 IQR 184
>gi|139439865|ref|ZP_01773230.1| Hypothetical protein COLAER_02264 [Collinsella aerofaciens ATCC
25986]
gi|133774793|gb|EBA38613.1| Hypothetical protein COLAER_02264 [Collinsella aerofaciens ATCC
25986]
Length = 183
Score = 62.8 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR DLNP+EEA GY QLI G TQ + V KSRS + N LR+L LP V++MI
Sbjct: 7 IENLQRSDLNPVEEAKGYRQLIDASGMTQEALSKAVSKSRSAITNSLRLLDLPEVVQQMI 66
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ +++ GHAR +++ A++ +++K+ E + + R
Sbjct: 67 FEGKLTAGHARAILAVPYED--ARIRLAEKVVTEGLSVRATENLAPLFSAGETPKTPRPA 124
Query: 247 EKY-LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
+ + N+ +K K + I+++ E+L I
Sbjct: 125 TPQSFKKAARVLRQVFNTNVRVKSSRGKNKIEIEFKDEEELSRIL 169
>gi|114766520|ref|ZP_01445478.1| chromosome partitioning protein, ParB [Pelagibaca bermudensis
HTCC2601]
gi|114541287|gb|EAU44337.1| chromosome partitioning protein, ParB [Roseovarius sp. HTCC2601]
Length = 346
Score = 62.8 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ + + +K + Q I + IVP+P PR +F+ + L L +SI+ G++Q + V
Sbjct: 19 SGDLAALTRKNKPAQAGQRDIPLDDIVPDPEQPRRHFDKDQLASLAESIRIQGVLQAITV 78
Query: 82 RAIDNGLYKI-IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
+ D + I GERRF+AAK+A L +P ++R + + + ++ E
Sbjct: 79 QPADEAGKHVLIMGERRFQAAKLAGLIRIPAVVREMTDALRMAQLTENV--QRADLTTLE 136
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+ G +++ I +G + V+ + K+P +R+
Sbjct: 137 VAEAVAAMRAAGQSRSAIAEALGWNEGEVSRFAALAKMPDVLRD 180
>gi|313884373|ref|ZP_07818135.1| ParB-like protein [Eremococcus coleocola ACS-139-V-Col8]
gi|312620451|gb|EFR31878.1| ParB-like protein [Eremococcus coleocola ACS-139-V-Col8]
Length = 221
Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 73/128 (57%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P +P ++E + D +S+K +G++
Sbjct: 10 LASVDDLFSTEESRADESREKIIEIPLTELFPFKDHPFKVIDNEAMLDTAESVKQYGLLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R D G Y+++AG RR RA ++A L +PVI+RN+D+ +++ I + N+QR+++ P
Sbjct: 70 PAIARPRDEGGYELVAGHRRKRACELAELDTMPVIVRNLDDDAAIIIMVDSNLQRENILP 129
Query: 138 LEEALGYE 145
E A ++
Sbjct: 130 SERAFAFK 137
>gi|116329558|ref|YP_799277.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332447|ref|YP_802164.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116122451|gb|ABJ80344.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116127314|gb|ABJ77406.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 281
Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 27/297 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS+ + L +L + + E + + I + I+P+ + PR
Sbjct: 1 MSSKSKR------LGSL---------ADVFQAEKLEGTIRKIRLDKILPSENQPRQD-RK 44
Query: 61 EGLEDLCQSIKSHGIIQPLIV--RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+G+EDL +S+ G++QP+IV + ++ YKI+AGERR+ AAK +E+ I + D
Sbjct: 45 KGIEDLARSLDKDGLLQPIIVTKQNPEDENYKIVAGERRYHAAKQLGWAEIECKILDRDE 104
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
K + +AI+EN+QR++L+P EE L + + YT ++G++ GKSRS++ +L I L
Sbjct: 105 KETFRLAIIENLQRENLSPYEEVEAMSHLKNSFKYTDQELGTLFGKSRSYMTELLGISNL 164
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
++ I + + ++ + + N++E+
Sbjct: 165 SKEELRSCKEAGIESKNLLIQAVAASRKGTFSEFLNLFQTGALKTVKDAKSFNREEENLS 224
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + +++L I + G I + E L I L+ +
Sbjct: 225 TPKITSATNPKVSNLNS-------TEYKITKKQ--GLIQISSDNEELLGNIFKLIKK 272
>gi|94971962|ref|YP_594002.1| parB-like partition proteins [Deinococcus geothermalis DSM 11300]
gi|94554013|gb|ABF43928.1| parB-like partition protein [Deinococcus geothermalis DSM 11300]
Length = 291
Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 76/115 (66%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
E + +++ ++ P+ PR +F E LE+L +SI+ G++QPL+VR +
Sbjct: 18 EGVEALAQPAVTRVAVQALQPSTFQPRVHFAPEALEELARSIREQGVLQPLLVRPLGQER 77
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
Y+I+AGERR+RAA++A L+EVPV++R++ ++ + A VEN+QR++LN +EE
Sbjct: 78 YEIVAGERRWRAAQLAGLTEVPVLLRHLTDEQAQLAAAVENLQRENLNVIEEVQA 132
>gi|282601277|ref|ZP_06257965.1| ParB family protein [Subdoligranulum variabile DSM 15176]
gi|282569588|gb|EFB75123.1| ParB family protein [Subdoligranulum variabile DSM 15176]
Length = 280
Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 68/129 (52%)
Query: 26 DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID 85
+ E + + E I + + P ++P + E + + S++ +GI+ P I R
Sbjct: 3 STEESRQDAKLEKVREIPLSELHPFKNHPFKVKDDEAMMETADSVRQYGILVPAIARPDP 62
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P E A Y+
Sbjct: 63 EGGYELVAGHRRHRASELAEKETMPVIVRDLDDDAATIIMVDSNLQRESLLPSERAFAYK 122
Query: 146 QLISEYGYT 154
+ +
Sbjct: 123 MKLEAMKHQ 131
>gi|170745049|ref|YP_001766507.1| parB-like partition protein [Methylobacterium radiotolerans JCM
2831]
gi|170659211|gb|ACB28264.1| parB-like partition protein [Methylobacterium radiotolerans JCM
2831]
Length = 378
Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 71/181 (39%), Gaps = 10/181 (5%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+AL N + + I + I P+P PR F ++DL ++IK
Sbjct: 4 LSAL----NAKPEDEVTSVSEPDGTPFRIKLSDIEPDPDQPRKMFTDADVDDLAENIKER 59
Query: 74 GIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+ P+ V+ ++ I GE R+RA+ A L ++P ++ +K A +
Sbjct: 60 GVKLPISVKTHPTKSGMWMINDGEIRWRASGRAGLDDIPAVVDENFDKFDQVNANEKRYA 119
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
+ E G+ + +I +GK + + +L ++ P V E
Sbjct: 120 LHPMELAEFVKA----RLADGFKKGEIAKRLGKKANAITELLALVDAPPCVTEACTSGRC 175
Query: 192 S 192
+
Sbjct: 176 T 176
>gi|218264030|ref|ZP_03477947.1| hypothetical protein PRABACTJOHN_03637 [Parabacteroides johnsonii
DSM 18315]
gi|218222320|gb|EEC94970.1| hypothetical protein PRABACTJOHN_03637 [Parabacteroides johnsonii
DSM 18315]
Length = 582
Score = 62.8 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 64/230 (27%), Positives = 121/230 (52%), Gaps = 9/230 (3%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-D 85
+ EK + +++ ++ P+ +NPR YF+ L +L +SI+ G+IQP+ VR + D
Sbjct: 2 ATEKFQTVAENNIVAVALANVQPSNYNPRKYFDETSLAELAESIRQQGVIQPIGVRPVAD 61
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
++I+ GERR+RA+ MA L E+P ++ NV ++++ E+AI EN+QR+D+ P+EEA Y+
Sbjct: 62 TDRFEIVFGERRYRASLMAGLEEIPAVVLNVSDETAEEMAITENLQRQDVTPMEEANAYQ 121
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+L+ Y + GKS S++ L+ L + ++ ++E+++ A + +
Sbjct: 122 KLMESGRYDVQSLAVQFGKSESYIRTRLKFASLIPEIALLLEQDELTVSVAAEICRYGED 181
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ I K + + + E++ Y TDLE+
Sbjct: 182 IQREVYIKHLKEES-------MLYSSWRGLKAAEVAKYIERD-YTTDLER 223
>gi|291522912|emb|CBK81205.1| ParB-like partition proteins [Coprococcus catus GD/7]
Length = 303
Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 110/241 (45%), Gaps = 5/241 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I I P ++P + E ++DL +S+K +G++ P
Sbjct: 6 GEKIKLASIDELLGVVNEESAMEIEISKIHPFKNHPFKVLDDEKMQDLVESVKINGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R +N Y++++G RR AA++A L+ +P I+R + + ++ + N+QR++L P
Sbjct: 66 VLLRMDENEEYEMVSGHRRMHAAQLAGLTTIPAIVRELSDDDAIVAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
E+A Y+ ++ S G++ ++ + L V E ++ + +
Sbjct: 126 EKAFAYKMKLAAMKRQAGRPKSNSGQNDQNLIGTVSRDVLAEQVGESSKQIQRYIRLTEL 185
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
+ D + ++ + + + ++ VQ + I + K K + L +++
Sbjct: 186 IPELLDLVDNKKLQFTVAVDISYIDKEVQGW-----IYEYICDTGFIKPKQIAALRNQLN 240
Query: 259 S 259
Sbjct: 241 D 241
>gi|126661191|ref|ZP_01732267.1| ParB-like partition protein [Cyanothece sp. CCY0110]
gi|126617527|gb|EAZ88320.1| ParB-like partition protein [Cyanothece sp. CCY0110]
Length = 317
Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 8/253 (3%)
Query: 19 GEVNQSIDSPEKKTE-TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
V+ ID+ K + + S I I I PR YFE + LE+L SIK HGI+Q
Sbjct: 13 SSVSSFIDTATKSLDISDSSSVKTIPIEVIHLPRSQPRRYFEPQRLEELVTSIKQHGILQ 72
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PL+VR + G Y+++AGERR+RAAK A L+EVPVII+ +++ +L++A++EN+QR+DLNP
Sbjct: 73 PLLVRLKETGEYELVAGERRYRAAKEALLTEVPVIIKELNDCEALQLALIENLQREDLNP 132
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+EE G +L+ + + AN + S ++ +E + L
Sbjct: 133 VEETKGILELLMLNLSYTSIDEVKSLLYQMKRANDSQ------SNLDIFNQEPVQLVVLL 186
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+++ + V + + K +E E+ L + I
Sbjct: 187 FKQLGRQTWESFVKNRLPLLNLPEDILTVLQNGEIAYTKAKSIAQVKEVEQRKQLLNEAI 246
Query: 258 SSKVGLNISIKHR 270
S + L+ +IK +
Sbjct: 247 SDNLSLS-AIKDK 258
>gi|223984986|ref|ZP_03635086.1| hypothetical protein HOLDEFILI_02390 [Holdemania filiformis DSM
12042]
gi|239624251|ref|ZP_04667282.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|223963057|gb|EEF67469.1| hypothetical protein HOLDEFILI_02390 [Holdemania filiformis DSM
12042]
gi|239520637|gb|EEQ60503.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 309
Score = 62.4 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 73/137 (53%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P +P + + + + SIK +G++
Sbjct: 10 LASVDDLFSTEESRQDEQLEKIQEIPLSELHPFKDHPFKVKDDDAMIETADSIKKYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R + +G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR++L P
Sbjct: 70 PAIARPLPDGGYELVAGHRRRRASELAGKETMPVIVRDLDDDAATIIMVDSNLQRENLLP 129
Query: 138 LEEALGYEQLISEYGYT 154
E A Y+ + +
Sbjct: 130 SERAFAYKMKLEAIKHQ 146
>gi|295099020|emb|CBK88109.1| ParB-like partition proteins [Eubacterium cylindroides T2-87]
Length = 303
Score = 62.4 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 108/241 (44%), Gaps = 5/241 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I I P ++P + E ++DL +S+K +G++ P
Sbjct: 6 GEKIKLASIDELLGVVNEESAMEIEISKIHPFKNHPFKVLDDEKMQDLVESVKINGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R +N Y++++G RR AA++A L+ +P I+R + + ++ + N+QR++L P
Sbjct: 66 VLLRMDENEDYEMVSGHRRMHAAQLAGLTTIPAIVRELSDDDAIVAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
E+A Y+ + + G+ + ++ L V E ++ + +
Sbjct: 126 EKAFAYKMKLDAMKRQGSRTDITSGQIDQKLKPVISRNILADQVGESSKQIQRYIRLTEL 185
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
+ D + ++ + + + ++ VQ + I + K K + L +++
Sbjct: 186 IPELLDLVDNKKLQFTVAVDISYIDKEVQGW-----IYEYISDTGFIKPKQIAALRNQLN 240
Query: 259 S 259
Sbjct: 241 D 241
>gi|332653644|ref|ZP_08419388.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
gi|332516730|gb|EGJ46335.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
Length = 309
Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 73/137 (53%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P +P + + + + SIK +G++
Sbjct: 10 LASVDDLFSTEESRQDEQLEKIQEIPLSELHPFKDHPFKVKDDDAMIETADSIKKYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R + +G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR++L P
Sbjct: 70 PAIARPLPDGGYELVAGHRRRRASELAGKETMPVIVRDLDDDAATIIMVDSNLQRENLLP 129
Query: 138 LEEALGYEQLISEYGYT 154
E A Y+ + +
Sbjct: 130 SERAFAYKMKLEAIKHQ 146
>gi|269216515|ref|ZP_06160369.1| spoOJ protein [Slackia exigua ATCC 700122]
gi|269130044|gb|EEZ61126.1| spoOJ protein [Slackia exigua ATCC 700122]
Length = 150
Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 22/55 (40%)
Query: 241 EGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + +SS G + +K K + I+++ E LK + +G+
Sbjct: 96 RQKPVTPPFFRTAARSLSSAFGTKVKVKSSRGKNKIEIEFKDEEDLKALLERVGK 150
>gi|121582875|ref|YP_973317.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
gi|120596137|gb|ABM39575.1| ParB family protein [Polaromonas naphthalenivorans CJ2]
Length = 583
Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
EK + I+++ I +NPR F+ ++++ S ++HGI+QP+++R
Sbjct: 2 EKAESVTSGTPARIAVNLIDRG-NNPRTRFDETAMDEMVASFRAHGILQPILLRPSGESR 60
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIR----NVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
++IIAGERRFRA V + I +D+ + A++ENV R+ + P+EEA
Sbjct: 61 FQIIAGERRFRAFTTVYGMGVDISIPALVVEMDDAQADMSALIENVIREKMTPVEEAEAA 120
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
+++ +++ +G R + + ++ VR+ ++ E+I LGHA L
Sbjct: 121 ARVLGYSQGDRDEAARKLGWERKFLDRRIALMYAIDEVRQALQDEKILLGHAELL 175
>gi|283797208|ref|ZP_06346361.1| ParB family protein [Clostridium sp. M62/1]
gi|291075171|gb|EFE12535.1| ParB family protein [Clostridium sp. M62/1]
Length = 311
Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 71/137 (51%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P +P + E + + S++ +G++
Sbjct: 10 LASVDDLFSTEESRADAQREKVLEIPLSELHPFKDHPFKVKDDEAMMETVDSVRQYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R NG Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P
Sbjct: 70 PAIARPDLNGGYELVAGHRRHRASELAGKETMPVIVRDLDDDAATIIMVDSNLQRESLLP 129
Query: 138 LEEALGYEQLISEYGYT 154
E A Y+ + +
Sbjct: 130 SERAFAYKMKLEAMKHQ 146
>gi|282600616|ref|ZP_05979249.2| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
gi|282571971|gb|EFB77506.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
Length = 294
Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 75/159 (47%)
Query: 26 DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID 85
+ E + + E I + + P ++P + E + + S++ +G++ P I R
Sbjct: 3 STEESRQDAKLEKVREIPLSELHPFKNHPFKVKDDEAMMETADSVRQYGVLVPAIARPDP 62
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR+ L P E A Y+
Sbjct: 63 EGGYELVAGHRRHRASELAEKETMPVIVRDLDDDAATIIMVDSNLQRESLLPSERAFAYK 122
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
+ + + ++++ + +
Sbjct: 123 MKLEAIKHQGERSDLTSRQVGEKSQTSIQLVASQAGESQ 161
>gi|168187286|ref|ZP_02621921.1| protein YyaA [Clostridium botulinum C str. Eklund]
gi|169294758|gb|EDS76891.1| protein YyaA [Clostridium botulinum C str. Eklund]
Length = 259
Score = 62.4 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 81/166 (48%), Positives = 114/166 (68%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + IS I+PN + PR YF + +++L +SIK++GIIQPL VR I+ Y++IAGE
Sbjct: 2 KKDIEYISTDIIIPNTYQPRKYFNEDTIDELGESIKTYGIIQPLSVRKIEGNKYELIAGE 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RRFRAAK L EVPVI+ ++ NK S IA++EN+QR++L+ LEEA YE LI E+ YTQ
Sbjct: 62 RRFRAAKKIGLKEVPVIVTDISNKDSAAIALLENIQRENLSFLEEAEAYENLIKEHKYTQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+ SI+GK +S +AN LRILKL +R I + ++ HAR L+
Sbjct: 122 AQLASIIGKKQSTIANKLRILKLDEDIRREILENNLTERHARALLK 167
>gi|298247566|ref|ZP_06971371.1| parB-like partition protein [Ktedonobacter racemifer DSM 44963]
gi|297550225|gb|EFH84091.1| parB-like partition protein [Ktedonobacter racemifer DSM 44963]
Length = 355
Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 5/215 (2%)
Query: 13 GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
GLA+ + S E++ + I I + NP PR E E L+ L ++I S
Sbjct: 22 GLAS---SIFTSKVQEEEQRLLHEKQPQQIDIDLLFDNPFQPRVAMEEESLQQLSETIAS 78
Query: 73 HGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
HG L+ R Y++ AG RR AAK A L ++PVI+ + ++ +A EN+
Sbjct: 79 HGFQGVLVARPHPQRPGTYQLTAGHRRREAAKRAGLKKLPVIVHSWSDQDMATLAATENI 138
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
QR+DL+PLEE + +I + G TQ ++ S + K R +V N LR+ K P+ ++ + +
Sbjct: 139 QREDLSPLEEGKLFLIMIDQMGLTQVEVASAIKKDRGYVRNRLRLAKAPADIQAFVEMKT 198
Query: 191 ISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
S+ L+ D AQ+I TE+L
Sbjct: 199 DSMRAVIYLLDIEDVTERAQIIAQLLNRKLTTEDL 233
>gi|284054522|ref|ZP_06384732.1| ParB family chromosome partitioning protein [Arthrospira platensis
str. Paraca]
Length = 174
Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 46/107 (42%), Positives = 68/107 (63%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I IV + PR YF + + L SIKS GI+Q LIVR ID G Y+++AGERR+R
Sbjct: 33 RQIPIKQIVISKVQPRKYFSEQSINKLAASIKSSGILQDLIVRPIDKGKYELVAGERRYR 92
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
AA++ L +P ++ + + +L+ A+ EN+QR+DLNP+EE +
Sbjct: 93 AAQIVGLETIPAQVKEMSDAEALQCALTENIQREDLNPIEETEAILR 139
>gi|160939351|ref|ZP_02086701.1| hypothetical protein CLOBOL_04244 [Clostridium bolteae ATCC
BAA-613]
gi|158437561|gb|EDP15323.1| hypothetical protein CLOBOL_04244 [Clostridium bolteae ATCC
BAA-613]
Length = 309
Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 74/137 (54%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ + E + + E I + + P +P + + + + SIK +G++
Sbjct: 10 LASVDDLFSTEESRQDEQLEKIQEIPLSELHPFKDHPFKVKDDDAMIETADSIKKYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R++ +G Y+++AG RR RA+++A +PVI+R++D+ ++ I + N+QR++L P
Sbjct: 70 PAIARSLPDGGYELVAGHRRRRASELAGKETMPVIVRDLDDDAATIIMVDSNLQRENLLP 129
Query: 138 LEEALGYEQLISEYGYT 154
E A Y+ + +
Sbjct: 130 SERAFAYKMKLEAIKHQ 146
>gi|317489094|ref|ZP_07947619.1| ParB-like partition protein [Eggerthella sp. 1_3_56FAA]
gi|325831038|ref|ZP_08164362.1| ParB-like protein [Eggerthella sp. HGA1]
gi|316911826|gb|EFV33410.1| ParB-like partition protein [Eggerthella sp. 1_3_56FAA]
gi|325486959|gb|EGC89405.1| ParB-like protein [Eggerthella sp. HGA1]
Length = 314
Score = 62.0 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 68/141 (48%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V+ S ++ + E I++ +I P +P + E + L +SI G++
Sbjct: 10 LPTVDDLFTSQGEREQDAGEKVREIALEAIEAFPGHPFKVADDEDMARLAESIAESGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PL VR +G+Y +++G RR RAA++A L+ VP ++R + + + + N+QR+ + P
Sbjct: 70 PLTVRPFGDGMYGLVSGHRRKRAAEIAGLATVPCVVRCMGDDEATIAMVDSNLQRETILP 129
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E A Y +
Sbjct: 130 SERAFAYSMRLEAMKRQGQRT 150
>gi|218281938|ref|ZP_03488263.1| hypothetical protein EUBIFOR_00831 [Eubacterium biforme DSM 3989]
gi|218217048|gb|EEC90586.1| hypothetical protein EUBIFOR_00831 [Eubacterium biforme DSM 3989]
Length = 301
Score = 62.0 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 78/162 (48%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I I P ++P + E ++DL +S+K +G++ P
Sbjct: 6 GEKIKLASIDELLGVVNEESAMEIEISKIHPFKNHPFKVLDDEKMQDLVESVKINGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R +N Y++++G RR AA++A L+ +P I+R + + ++ + N+QR++L P
Sbjct: 66 VLLRMDENEEYEMVSGHRRMHAAQLAGLTTIPAIVRELSDDDAVIAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E+A Y+ + T + ++ +
Sbjct: 126 EKAFAYKMKMDAMRRTAGRPTKENPRQNVGNYETADLIGKDN 167
>gi|331092094|ref|ZP_08340925.1| hypothetical protein HMPREF9477_01568 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402295|gb|EGG81866.1| hypothetical protein HMPREF9477_01568 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 302
Score = 62.0 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 101/241 (41%), Gaps = 5/241 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I+ I +P + E + DL +S+K++G++ P
Sbjct: 6 GEKIKLTSIDELLGVVNEESAMEIEINRIHAFKDHPFKVLDDEKMADLVESVKTYGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R+ Y++I+G RR AA + L+ +P I+R + + ++ + N+QR++L P
Sbjct: 66 VLLRSDGENGYEMISGHRRMHAAVIVGLATIPAIVRELSDDDAVIAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
E+A Y+ + + L V E ++ + +
Sbjct: 126 EKAFAYKMKLDAMKRQAGRPSQKNSGQNDQNFGKVSRDVLAEEVVESSKQIQRYIRLTEL 185
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
+ D + ++ + + + E+ +Q+ + I + K K +T L K++
Sbjct: 186 IPELLDMVDAKKLNFTIAVDISYIEKEIQKW-----IYEYIRDTGFVKPKQITALRKQLE 240
Query: 259 S 259
Sbjct: 241 E 241
>gi|291571715|dbj|BAI93987.1| ParB-like partition protein [Arthrospira platensis NIES-39]
Length = 291
Score = 62.0 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 6/225 (2%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I IV + PR YF + + L SIKS GI+Q LIVR ID G Y+++AGERR+R
Sbjct: 16 RQIPIKQIVISKVQPRKYFSEQSINKLAASIKSSGILQDLIVRPIDKGKYELVAGERRYR 75
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AA++ L +P ++ + + +L+ A+ EN+QR+DLNP+EE +L++ ++
Sbjct: 76 AAQIVGLETIPAQVKEMSDAEALQCALTENIQREDLNPIEETEAILRLLA------INLN 129
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
V K RS + + K + + K E + + + +
Sbjct: 130 DSVEKVRSLLHRMKNDAKKKVTTHSAMGKPEAEIVKSTFDSLGRMSWDSFVSNQLPMLKL 189
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
+ + K + +++ L L + I+ + L
Sbjct: 190 PPEIMKALGEGEIDYTKAKEIAKLKSEKERLALLSEAIAQNLTLR 234
>gi|288963009|ref|YP_003453303.1| chromosome partitioning protein [Azospirillum sp. B510]
gi|288915275|dbj|BAI76759.1| chromosome partitioning protein [Azospirillum sp. B510]
Length = 283
Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 6/225 (2%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ + + NP PR +F+ L L SI+ HG+ P++VR + G Y +I GERR
Sbjct: 25 VVELDLARVHRNPDQPRRHFDEAELRSLAASIERHGLQNPILVRPLPQGEYLLIGGERRV 84
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RA +M V I+ + D EI +++NVQR DLN +E A +LI ++GYT +++
Sbjct: 85 RAHEMLGRKTVFAILTSGD---PDEIGLIDNVQRVDLNAVEYAAALARLIDKHGYTHDEL 141
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMS 218
++VG+ R+ V +L I+ LP+ +RE + + ++ + + + K+
Sbjct: 142 AAVVGRDRTDVTKLLAIMGLPAEMREEYATRFAHVSRSV-MIEIAAAPAELHAQLWKRAK 200
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGSREKEK--YLTDLEKKISSKV 261
+ + V++ + + + E + + L+ ++ +
Sbjct: 201 EGASVKAVRQAKREHAQGGATDAAAPEPDAGEAVRTLQASVARIL 245
>gi|95930261|ref|ZP_01312999.1| parB-like partition proteins [Desulfuromonas acetoxidans DSM 684]
gi|95133724|gb|EAT15385.1| parB-like partition proteins [Desulfuromonas acetoxidans DSM 684]
Length = 273
Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 112/206 (54%), Gaps = 3/206 (1%)
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
P+P+ PR +F+ + L +L ++I HG++QP++ +G ++I+GERR+RA+K+A L+
Sbjct: 21 PDPNQPRKHFDDKALLELKETICQHGVLQPVLFTLSPDGQLQLISGERRYRASKLAGLTH 80
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
+P I + ++SLE+A++EN+ R++L+P+EEA ++LI + Q D+ +GK++S
Sbjct: 81 IPAIFKK---QASLEVALIENIVRENLSPIEEAEAIQRLIDDKICRQKDLPEKLGKAKST 137
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
++ IL + +LP ++ R + V+ + K + T V++
Sbjct: 138 ISEILSLNRLPEEIKNDCRSNNLVPRGILVEVAKKRKKHTMLSLYEKYKARGLTRGEVRK 197
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLE 254
+ + + ++ + +E
Sbjct: 198 VSRQPRRTTPGSSLQKSIDQLMRKIE 223
>gi|75812649|ref|YP_320267.1| ParB family protein [Anabaena variabilis ATCC 29413]
gi|75705405|gb|ABA25078.1| ParB family protein [Anabaena variabilis ATCC 29413]
Length = 320
Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/120 (39%), Positives = 77/120 (64%)
Query: 25 IDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI 84
+ + ++ + ++I I PR YF+ LE+L +SIK GI++PL+VR +
Sbjct: 22 SSTTATQPDSTLNATSTVAIDKIHLPTSQPRRYFDEHKLEELSRSIKELGILEPLLVRPL 81
Query: 85 DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
G Y+++AGERR+RAA MA L+EVP++ + +D+ + ++ +VEN+QR+DLN LEE G
Sbjct: 82 PGGDYELVAGERRYRAATMAGLTEVPIVAKAMDDTITYQVRLVENLQREDLNTLEETEGI 141
>gi|225026169|ref|ZP_03715361.1| hypothetical protein EUBHAL_00410 [Eubacterium hallii DSM 3353]
gi|224956420|gb|EEG37629.1| hypothetical protein EUBHAL_00410 [Eubacterium hallii DSM 3353]
Length = 298
Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 13/238 (5%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L AL G E I+I S+ P P++P + + +E+L SI +
Sbjct: 15 LDALFGT-----------NEETTNGISEIAIGSLHPFPNHPFQVKDDKKMEELSDSITQY 63
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++ P IVR ++G Y+++AG RR RA ++A L ++PVII+++ + + I + N+QR+
Sbjct: 64 GVLVPGIVRLRESGGYELVAGHRRKRACELAGLEKMPVIIKDLTDDEATVIMVDSNIQRE 123
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
+L E+A Y+ + +A S R+++R ++
Sbjct: 124 ELLISEKAFAYKMKYEALKRQGKRSDLTSCQVGKKLAVEEVSQNTGDSSRQILRYIHLTE 183
Query: 194 --GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
L V VS S L ++ K + ++ K
Sbjct: 184 LITELLELADEKKLPFNTAVEVSYLRSEEQQILLQYMSNHNMVPSMKQAKELKQISKE 241
>gi|23011670|ref|ZP_00051961.1| COG1475: Predicted transcriptional regulators [Magnetospirillum
magnetotacticum MS-1]
Length = 145
Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 68/143 (47%), Positives = 98/143 (68%), Gaps = 4/143 (2%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++ RLGRGLAALIG+ + E + + Q +++ + PNP NPR F L+
Sbjct: 1 TARPRLGRGLAALIGDFPDTGS--EAASRAADQPQRKVAVEFLRPNPRNPRRRFSEPELD 58
Query: 65 DLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
+L SI+ G+IQP++VRA+ G ++I+AGERR+RAA+ A L+EVPV+I +D+++SL
Sbjct: 59 ELAASIRQRGVIQPIVVRALSGVPGTFEIVAGERRWRAAQRAGLNEVPVVIVEIDDRTSL 118
Query: 123 EIAIVENVQRKDLNPLEEALGYE 145
E AI+ENVQR DLN +EEA GYE
Sbjct: 119 EYAILENVQRTDLNAIEEAAGYE 141
>gi|209522857|ref|ZP_03271415.1| parB-like partition protein [Arthrospira maxima CS-328]
gi|209496906|gb|EDZ97203.1| parB-like partition protein [Arthrospira maxima CS-328]
Length = 177
Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/107 (42%), Positives = 66/107 (61%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I IV + PR YF +G+ L SIKS GI Q LIVR I Y+++AGERR+R
Sbjct: 16 RQIPIKQIVISKVQPRKYFSEQGINKLAASIKSSGIQQDLIVRPIGGDKYELVAGERRYR 75
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
AA++ L VP ++ + + +L+ A+ EN+QR+DLNP+EE +
Sbjct: 76 AAQIVGLETVPAQVKEMSDAEALQCALTENIQREDLNPIEETEAILR 122
>gi|299533238|ref|ZP_07046622.1| parB-like partition protein [Comamonas testosteroni S44]
gi|298718768|gb|EFI59741.1| parB-like partition protein [Comamonas testosteroni S44]
Length = 768
Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
Q + T E D ++I SI + NPR +F+ L++L SI + G+ QP+++R
Sbjct: 5 QDTVTQALPTPGAGERMDHVAIVSIARSLTNPRKHFDPAKLQELADSIAASGVHQPILLR 64
Query: 83 AIDNGL-----------------YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
+ Y+++AGERR+RA ++A ++++P +IR + ++ +LE
Sbjct: 65 PLPPHRLEDTHREARALKQPAPEYELVAGERRWRACQLAKVAQIPAMIRPMTDEQALEAQ 124
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+D+ LEEA GYE L+ + +G+ +GKSR +V + L++L L RE
Sbjct: 125 VIENLQREDVTELEEAEGYESLMKHSKLNADQVGAKIGKSRGYVYSRLKLLDLCQQAREA 184
Query: 186 IRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+R+ +I A + A ++ + D + + +++ + +
Sbjct: 185 LREGKIDFSRALLAARIPNEQLQIKAVDFMTHEDWQGDLPGYRECAKHVQKEFMLRLDTA 244
Query: 244 REKEKY 249
R K
Sbjct: 245 RFKIAD 250
>gi|94152464|ref|YP_581871.1| plasmid partitioning protein ParB [Cupriavidus metallidurans CH34]
gi|93358834|gb|ABF12921.1| Plasmid replication- partition related protein ParB [Cupriavidus
metallidurans CH34]
Length = 369
Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 73/155 (47%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ P K SQ + + I +PH PR F+ + L L +I G+ P
Sbjct: 85 SGGASGVSPPPKALHIPIGSQQMLPMDQIDVSPHQPRLVFDQDALASLTSTIDLVGLNNP 144
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+ VR D+G +++IAGERRFRA ++ + +P +R++ K + +A+ +N R+DL+
Sbjct: 145 ITVRRKDDGRFELIAGERRFRAFQLKHEAYIPGFVRDLGEKEAAILAMTDNDAREDLSDF 204
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
E ALGY++L+ S +
Sbjct: 205 ERALGYQRLLKLGHCLNQMDISRCVGRSMATVSRC 239
>gi|307149657|ref|YP_003891027.1| ParB-like partition protein [Cyanothece sp. PCC 7822]
gi|306986786|gb|ADN18662.1| parB-like partition protein [Cyanothece sp. PCC 7822]
Length = 370
Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 57/147 (38%), Positives = 94/147 (63%), Gaps = 7/147 (4%)
Query: 1 MSNNYSKRRL-GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
MS + K+ G+ L +++ E +T + P+S I + I P PR+YF+
Sbjct: 1 MSPSKQKKPFAGK----LTTPSPSWLETSEDQTTSAPKSL--IKLSDIHLPPTQPRHYFD 54
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ L+ L SI HGI+QPL+VR ++ G Y+++AGERR RAA A L+EVPV+++ + ++
Sbjct: 55 PQSLKGLADSISEHGILQPLLVRPLETGGYELVAGERRLRAAHQAGLTEVPVVVKELTDE 114
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQ 146
++ ++A++EN+QR+DLNP+EE G Q
Sbjct: 115 AAWQLALIENLQREDLNPVEETEGILQ 141
>gi|134288325|ref|YP_001110488.1| parB-like partition protein [Burkholderia vietnamiensis G4]
gi|134132975|gb|ABO59685.1| ParB family protein [Burkholderia vietnamiensis G4]
Length = 384
Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 11/256 (4%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
S + + +++ I P+P+ PR F+ + L L +I G+ P+I
Sbjct: 100 TAVSPAATHDVVTKVLNPALLLALDMIDPSPYQPRIIFDEDALASLADTISDSGLNNPII 159
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR +G Y++IAGERR A K+ L + +R + + + +A +N R+DL E
Sbjct: 160 VRLKSDGRYELIAGERRLLAHKLLRLPTIAAFVRELSDADAAIMATTDNDAREDLADFER 219
Query: 141 ALGYEQ-LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
Y++ L + Q ++ VG+S + V+ L KLP V M+ + +G
Sbjct: 220 GRSYKRLLDDKVVENQRELARRVGRSMATVSRCLAYFKLPQEVIGMLTSNPLLVGTKVVA 279
Query: 200 VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS 259
S + V + ++ + +L QE K + + +L
Sbjct: 280 ELVSFAEQGYRPQVVEAVAKIEKTKLSQESALNWLKTEVRRMKNPSVAPAPRNL------ 333
Query: 260 KVGLN----ISIKHRN 271
VG + + R
Sbjct: 334 HVGGKSVAEVKVDGRK 349
>gi|172055118|ref|YP_001806445.1| ParB family chromosome partitioning protein [Cyanothece sp. ATCC
51142]
gi|171701399|gb|ACB54379.1| chromosome partitioning protein, ParB family [Cyanothece sp. ATCC
51142]
Length = 324
Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/140 (37%), Positives = 81/140 (57%), Gaps = 11/140 (7%)
Query: 13 GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
G+ AL G E+ E + I I I+ P PR YF+ E + L +SI+
Sbjct: 12 GINALFG---------EELEEDKQITPHYIPIELILLPPSQPRRYFDPEKMAQLTESIRV 62
Query: 73 HGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
GI+QPL+VR Y+++ GERR+R AK A L+EVP+I++++ + + A++EN+
Sbjct: 63 DGILQPLVVRPHPTKSGAYELVFGERRYRGAKNAELTEVPIIVKDLSDSQAQRFALIENL 122
Query: 131 QRKDLNPLEEALGYEQLISE 150
R+DLNP++E G QL+S
Sbjct: 123 HREDLNPVDEVEGILQLLSH 142
>gi|331083499|ref|ZP_08332611.1| hypothetical protein HMPREF0992_01535 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404192|gb|EGG83740.1| hypothetical protein HMPREF0992_01535 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 302
Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 97/241 (40%), Gaps = 5/241 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E E+ I I I +P + E + DL +S+K++G++ P
Sbjct: 6 GEKIKLTSIDELLGVVNEETAMEIEISRIHAFKDHPFKVLDDEKMADLVESVKTYGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R+ Y++I+G RR AA +A LS +P I+R + + ++ + N+QR++L P
Sbjct: 66 VLLRSDGENGYEMISGHRRMHAAVIAGLSTIPAIVRELSDDDAVIAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
E+A Y + + + + + + E + + ++
Sbjct: 126 EKAFAYRMKLDAMKHQGY----RTDITSGQNGQKSKGVVSRDILAEQVGESTRNVQRYIR 181
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
L L + ++ + ++ K I + K K +T L K++
Sbjct: 182 LTELIPELLDMVDVKKLNFTIAVDISYIDKEMQKWIYEY-IRDTGFIKPKQITALRKQLE 240
Query: 259 S 259
Sbjct: 241 E 241
>gi|187925982|ref|YP_001892327.1| parB-like partition protein [Ralstonia pickettii 12J]
gi|241665467|ref|YP_002983826.1| parB-like partition protein [Ralstonia pickettii 12D]
gi|187727736|gb|ACD28900.1| parB-like partition protein [Ralstonia pickettii 12J]
gi|240867494|gb|ACS65154.1| parB-like partition protein [Ralstonia pickettii 12D]
Length = 335
Score = 61.6 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 103/262 (39%), Gaps = 16/262 (6%)
Query: 12 RGLAALIGEVNQSIDSPE--KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQS 69
RGL +G+ S E + T I + + NP N R ++ + +++ S
Sbjct: 41 RGL---LGQPAAPTFSAESAESANTSERRVIKIPLDRLHENPLNARRIYDPQTVQERAAS 97
Query: 70 IKSHGIIQPLIVRAID--NGLYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAI 126
I +HG P + G Y +I G R RA A + + + ++
Sbjct: 98 IATHGQQTPGLAAPHPSKPGWYVLIDGHYRKRALAAAGKAEMDCFVEEGLSDIDFYRLSF 157
Query: 127 VENVQRKDLNPLEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
V N QR + L+ A+ + + L + DI I G S V L +LKLP SV ++
Sbjct: 158 VLNEQRSGQSVLDNAIAWRQLLDEGKVKKEEDICEITGVSAGTVNKTLALLKLPDSVLDV 217
Query: 186 IRKEE----ISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+++ I+ G+ TL S + +V + + + V++ ++ +
Sbjct: 218 MKERPAGIGIATGYELTLYCKSAGEERTRELVHRVLEEGLSSRDVEQIRKIAQEGRTRKV 277
Query: 242 GSREKEKYLTDLEKKISSKVGL 263
++ + + E + +G
Sbjct: 278 KEVSRQYKIRNSEGDL---LGT 296
>gi|325284288|ref|YP_004256828.1| parB-like partition protein [Deinococcus proteolyticus MRP]
gi|324316352|gb|ADY27465.1| parB-like partition protein [Deinococcus proteolyticus MRP]
Length = 339
Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ + ++ I ++ I PNP R YF + L+ L SI G++QP+++R + Y+
Sbjct: 25 EQPDLTQAVREIPLNQIRPNPEQQRRYFAQDELQRLATSIAEKGVLQPVLLRPFE-QHYE 83
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
I+ GERR+RAA++A L+ +P +R +D++ + +EN+QR D+N E+
Sbjct: 84 IVFGERRWRAAQLAGLASIPAQVREMDDQEAALAGAIENLQRVDINRFEDVN 135
>gi|325284502|ref|YP_004257041.1| parB-like partition protein [Deinococcus proteolyticus MRP]
gi|324316676|gb|ADY27787.1| parB-like partition protein [Deinococcus proteolyticus MRP]
Length = 307
Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 109/260 (41%), Gaps = 13/260 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS +L A I QS ++ E + + I I P+P+ R F
Sbjct: 1 MSARKPSSQL-----AAIVAAAQSNVEGIRQNEGERRAARQLPIGQISPSPYQARRDFS- 54
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L L + I+ HG++QP++VR + +++IAGERR+RA++ A L+++P ++R ++
Sbjct: 55 -NLASLVEDIREHGVLQPILVRPLGEDRFELIAGERRWRASQEAGLTKIPAVVREFTDRE 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
+L + + EN+QR+DLN E A +L + D S+ +LR +
Sbjct: 114 ALLVGLAENLQREDLNAYEIARAVIELAAAELEQPADKVRKALSSKRPEEEVLRAMDAAL 173
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ H L+ L A + +V + + Q + +
Sbjct: 174 GLLNKDMTLRTYQRHYLPLLRLDPHLIEAIEHGASYAAVLLIRGVEKRQQQQWLPKLVSG 233
Query: 241 EGSREKEKYLTDLEKKISSK 260
E SR DLE+ +
Sbjct: 234 EWSRS------DLEEALRKH 247
>gi|332655091|ref|ZP_08420832.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
gi|332515951|gb|EGJ45560.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
Length = 308
Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 101/261 (38%), Gaps = 8/261 (3%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + + + E+ E I + + P +P + E + +S++ G++
Sbjct: 10 LKGYDDIFSTEQSRAESQQERVQEIPLSELHPFEGHPFRVVDDEEMMKTAESVRDFGVLT 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P IVR +G Y+I++G RR RA+++A +P I+R++D+ +++ + + N+QR+ + P
Sbjct: 70 PAIVRPDPDGGYEIVSGHRRHRASELAGKETMPAIVRDLDDDAAIILMVDANLQRETILP 129
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
E A Y+ + + + + ++ + R +++
Sbjct: 130 SERAFAYKMKLDAIKHQGERTDLTSAQLGQKSWAVNQVAEQSGDSRVQVQRYIRLTELIP 189
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY--LTDLEK 255
L+ D + + L E+ + + + + L +
Sbjct: 190 ELLDMVDMGQIKFN------PAVELSYLASEEQKDFLSAMDYAQAAPSLSQAQRIKKLAQ 243
Query: 256 KISSKVGLNISIKHRNNKGQF 276
+ + I + KG+
Sbjct: 244 EGECTLDAMCEIMNEIKKGEL 264
>gi|222872345|gb|EEF09476.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 65/167 (38%), Positives = 112/167 (67%), Gaps = 1/167 (0%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKII 92
+ + + + P + PR + L++L SI++ G++QP++VR + + Y+II
Sbjct: 197 AREGAPSVLRVDQLQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRRVAEPDRYEII 256
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR+RA+K+A L +VPV++++V ++++ +A++EN+QR+DLNPLEEA G +LI E+
Sbjct: 257 AGERRYRASKLAGLDKVPVLVKDVADEAAAAMALIENIQREDLNPLEEAQGIMRLIREFR 316
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
+T VG+SRS V+N+LR+L L + V+ M+ ++ +GHAR L
Sbjct: 317 FTHEQAAESVGRSRSAVSNLLRLLNLAAPVQTMLMAGDLDMGHARAL 363
>gi|240146007|ref|ZP_04744608.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|257201888|gb|EEV00173.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
Length = 292
Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/309 (18%), Positives = 122/309 (39%), Gaps = 35/309 (11%)
Query: 1 MSN--NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ + +K +L L G+ + E I++ + +P
Sbjct: 1 MNKTGSAAKVKLNS-FDDLFGDGQP---------QAGIEQVQEIALSELHEFKGHPFKVL 50
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ E +++ +S++ HG++ P I R G Y+IIAG RR A ++ L +P+ IRN +
Sbjct: 51 DDEKMQETVESVREHGVLMPGIARPRAEGGYEIIAGHRRRHACELVGLDTMPMFIRNYTD 110
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ--------NDIGSIVGKSRSHVA 170
+ I + N+QR+D+ P E+A Y + +++G G+S V
Sbjct: 111 DEATIIMVDSNIQREDILPSEKAKAYRMKYEAMKHQGSRAGGLTLDELGGAAGESAKTVQ 170
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
+ I +L + +M+ +I + A + S+ ++ + + T++
Sbjct: 171 RYIWISRLSEPLLDMVDSGKIGIMQAVDISFLSEDAQQWVLVAIQDTNAVITKQQSAMLK 230
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKY---ETNEQLK 287
+K + F R + +E+ + IK + + + + ++
Sbjct: 231 ESDKKGELTFPMVRMLLEKEKPVER--------KVVIKTE----RINSYFPDTYSTDDIE 278
Query: 288 IICSLLGEN 296
I L +N
Sbjct: 279 KIIFQLLDN 287
>gi|319641933|ref|ZP_07996603.1| hypothetical protein HMPREF9011_02202 [Bacteroides sp. 3_1_40A]
gi|317386441|gb|EFV67350.1| hypothetical protein HMPREF9011_02202 [Bacteroides sp. 3_1_40A]
Length = 269
Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ K ++ + I +I P+ N R F L++L +SI+ GI+Q +
Sbjct: 60 TEEAPQQATFKTPLATATAETDLDITTIHPSTDNHRKTFNDASLQELAESIREVGILQAI 119
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPL 138
VR G Y+II GERR+RA+ +A + I N + + ++++ EN+QR+ + P
Sbjct: 120 AVRLRTEGGYEIIYGERRYRASLLAGAKTIKATIYNNVTDDEAEDMSLSENLQREQVRPT 179
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA +++L+ + Y + + G+S ++ L++ +L + + E++ E I++ A
Sbjct: 180 EEAKAFKRLLEKGRYDMYSLTARFGRSEKYIYTRLKLNELYAPIGELLDNETITVSVAEE 239
Query: 199 LVSTSDPLS 207
+ + +
Sbjct: 240 ISTYEPDIQ 248
>gi|166033001|ref|ZP_02235830.1| hypothetical protein DORFOR_02722 [Dorea formicigenerans ATCC
27755]
gi|166027358|gb|EDR46115.1| hypothetical protein DORFOR_02722 [Dorea formicigenerans ATCC
27755]
Length = 300
Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 109/241 (45%), Gaps = 8/241 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I I P ++P + E ++DL +S++ +G++ P
Sbjct: 6 GEKIKLASIDELLGVVNEESAMEIEISKIHPFKNHPFKVLDDEKMQDLVESVRINGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R DN Y++++G RR AA++A L+ +P I+R + + ++ + N+QR++L P
Sbjct: 66 VLLRMDDNEEYEMVSGHRRMHAAQLAGLTTIPAIVRELSDDDAIVAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
E+A Y+ + + ++ + + + + K R +++ +
Sbjct: 126 EKAFAYKMKLEAMKRQGVRTDLTLSQNETKLRSDEVLSKQVGESRAQVQRF---VRLTEL 182
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
+ D + ++ + +++ ++ VQ + I + K K + L +++
Sbjct: 183 IPELLDLVDNKKLQFTVAVNISYIDKEVQGW-----IYEYISDTGFIKPKQIAALRNQLN 237
Query: 259 S 259
Sbjct: 238 D 238
>gi|146280383|ref|YP_001170538.1| parB-like partition protein [Rhodobacter sphaeroides ATCC 17025]
gi|145558624|gb|ABP73233.1| parB-like partition protein [Rhodobacter sphaeroides ATCC 17025]
Length = 336
Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L AL K+ + P I+I IVP+P PR F+ + L+ L +SI++
Sbjct: 23 LDAL------------KRPKPQPTGPQEIAIDQIVPDPDQPRRSFDQDKLKSLAESIRAQ 70
Query: 74 GIIQPLIVRAIDNGLYK-IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G++Q + V+ D II GERRF+AAK+A L+++P ++R + ENVQR
Sbjct: 71 GVLQAITVQPADEAGKHVIIMGERRFQAAKLAGLAKIPAVVREAT-LEIRLAQLTENVQR 129
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
DL LE A + G ++ DI +G S V+ I K+P +++
Sbjct: 130 DDLTTLEIAQAVAAMRDA-GQSREDIAKALGWSEGSVSRFASISKMPEELQQ 180
>gi|317054744|ref|YP_004103211.1| parB-like partition protein [Ruminococcus albus 7]
gi|315447013|gb|ADU20577.1| parB-like partition protein [Ruminococcus albus 7]
Length = 288
Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 3/227 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIH--SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
++ E+ E IP++ + I I PNP PR +F E L L +SI ++GIIQP
Sbjct: 9 TKAFVEIREETVEEIPDTGKLLEIGTGDIRPNPSQPRRHFSPEELTSLAKSITANGIIQP 68
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
L VR +N +++I+GERR RAAK+A L VP I+ D K S +A++EN+QR DLN
Sbjct: 69 LTVRQTEND-FELISGERRLRAAKLAGLKTVPCILIEADKKRSAVLALLENIQRSDLNCF 127
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA +LI T+ I +G +RS +AN LR+LKL ++++ ++ ++ HAR
Sbjct: 128 EEAAAINKLIESGEITREKISIKLGMARSTIANKLRLLKLTDEEQQLMIEKGLTERHARA 187
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
L+ +D +++ + L + D + + K +
Sbjct: 188 LLRVADEDRRKEILAKTINGSWTVDTLEKYIDRLERQELKKTSYEKR 234
>gi|303238484|ref|ZP_07325018.1| parB-like partition protein [Acetivibrio cellulolyticus CD2]
gi|302593882|gb|EFL63596.1| parB-like partition protein [Acetivibrio cellulolyticus CD2]
Length = 254
Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 43 SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAK 102
I P+P+ PR YF+ L +L +SIK +G++QP+I ++G I+AGERR++AAK
Sbjct: 11 PIAEFQPDPNQPRKYFDETALSELAESIKQYGVLQPIIYYVNESGQKIIVAGERRYQAAK 70
Query: 103 MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
A LSE+P I+ + + ++A+VEN+ R+DL PLEEA +++L +Y Y+ + +
Sbjct: 71 KAQLSEIPAIVIDGNEAD--KVALVENILRQDLTPLEEAEAFQRLKDKYKYSNEKLSEVF 128
Query: 163 GKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDT 222
K+ + ++ L I KL +++E + ++ +K + +
Sbjct: 129 NKAPNTISETLSINKLSDTIKERYKANPELAKRELVKIARMRSEEGQINAYNKLTNYKPE 188
Query: 223 EELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK 273
E ++ + ++ K+ G ++ L K+S NI I K
Sbjct: 189 TEEPKDAEKDGKENYKLALG------FIKSLTGKLSK---SNIVISSDEEK 230
>gi|303258159|ref|ZP_07344167.1| stage 0 sporulation protein J [Burkholderiales bacterium 1_1_47]
gi|302859178|gb|EFL82261.1| stage 0 sporulation protein J [Burkholderiales bacterium 1_1_47]
Length = 367
Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 120/259 (46%), Gaps = 10/259 (3%)
Query: 13 GLAALIGEVNQSI-DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
GL +G +N++ D +++E E+ + + I +P PR F+ E L++L +SIK
Sbjct: 2 GLNLNLGNINKAAKDFTHRRSEASDETMRDVGVEVIKADPRQPRKEFDEEALKELAESIK 61
Query: 72 SHGIIQPLIVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
+HG+IQP+++R + Y IIAGERRFRA K+ + I++ + +
Sbjct: 62 AHGLIQPIVLRPSPDKEDEYYIIAGERRFRAVKLNGDKTIRAIVKKTLKPEEIGYVQMAE 121
Query: 130 VQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
++ + E + E G Q ++ +G +++ V+ +LP ++E + +
Sbjct: 122 NIKRANLTVVEIAEFICRQLEAGDKQAEVVEKLGLNKAIVSQYAVWPELPECIKEALTSK 181
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
+I ++ S Q + E + + + +K + K ++ + + ++
Sbjct: 182 KIG-----SIQSAYALFKTWQEYPEETAKFVAENEKISQAEARKFEPKSLYVQTFQDQED 236
Query: 250 LTDLEKKISSK--VGLNIS 266
++ ++S + + ++S
Sbjct: 237 ISQPSDQVSDEPVLDTSVS 255
>gi|238925953|ref|YP_002939471.1| chromosome partitioning parB family protein [Eubacterium rectale
ATCC 33656]
gi|238877630|gb|ACR77337.1| chromosome partitioning parB family protein [Eubacterium rectale
ATCC 33656]
Length = 298
Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L AL G E I I S+ P P++P + + +E+L +SI +
Sbjct: 15 LDALFGT-----------NEETNNGICEIEIGSLHPFPNHPFQVKDDKKMEELSESITQY 63
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++ P IVR ++G Y+++AG RR RA ++A L ++PVII+++ + + I + N+QR+
Sbjct: 64 GVLVPGIVRLRESGGYELVAGHRRKRACELAGLEKMPVIIKDLTDDEATVIMVDSNIQRE 123
Query: 134 DLNPLEEALGYEQLI 148
+L E+A Y+
Sbjct: 124 ELLISEKAFAYKMKY 138
>gi|182416754|ref|ZP_02948151.1| spoOJ protein [Clostridium butyricum 5521]
gi|237669604|ref|ZP_04529582.1| protein YyaA [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379411|gb|EDT76906.1| spoOJ protein [Clostridium butyricum 5521]
gi|237654838|gb|EEP52400.1| protein YyaA [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 259
Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 126/212 (59%), Gaps = 1/212 (0%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
I I ++PN + PR YF E +E+L +SIK +GIIQPL VR + Y+++AGE
Sbjct: 2 NNEIIQIDIDKVIPNIYQPRKYFNEESIEELSESIKQYGIIQPLTVRKRGDV-YELVAGE 60
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RAAK+A+L++VP I ++ + S EIA++EN+QR+DLN +EEA Y LI ++ +TQ
Sbjct: 61 RRLRAAKLANLNKVPCNIVDITDTESAEIALLENLQREDLNYIEEAEAYYNLIHDHSFTQ 120
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+++ +GK +S +AN LR+LKL + VR + +++ HAR+L++ + ++I
Sbjct: 121 DELAKRMGKKQSTIANKLRLLKLSTEVRGICLNNKLTERHARSLLTLPNEELQLKIIKKV 180
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+ ++ + + + K + K
Sbjct: 181 INDGLNVKKTEELINKELLKISSEELKKKRKN 212
>gi|300863454|ref|ZP_07108409.1| Chromosome partitioning protein, ParB family [Oscillatoria sp. PCC
6506]
gi|300338517|emb|CBN53551.1| Chromosome partitioning protein, ParB family [Oscillatoria sp. PCC
6506]
Length = 307
Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 21/271 (7%)
Query: 1 MSNNYSKRRLGR-GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
MS+ + G+ L+ L G+ E + ++ +SI SI PR YF+
Sbjct: 1 MSSKNDQPYKGKANLSVLFGD-----------DEVVEPTERLLSIESIQIASSQPRRYFD 49
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
S+ ++ L +S+K+ GI+QPL+VR + Y+++AGERR+RAA+ L+EVPVI+R++ +
Sbjct: 50 SQAMQALVESVKTDGILQPLLVRPLGEEKYELVAGERRYRAARELGLTEVPVIVRDLTEQ 109
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
+L +A+VEN+QR+DLNP+EE G QL+S + + +
Sbjct: 110 QALRVALVENLQREDLNPVEETEGILQLLSHHLE--------YDREEVIHLLYRMQNDVQ 161
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+I E+ + + + + + + + +
Sbjct: 162 RMNDNVIIHPEMQIVTKVFSELGRMSWESFVSNRLGLLKLPADIQEALRRGQIEYTKARA 221
Query: 240 FEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+++ LE I+ + L IK R
Sbjct: 222 IAKVKDEPARTLLLESAIAEGLSLT-QIKER 251
>gi|258512940|ref|YP_003189197.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-01]
gi|256634843|dbj|BAI00818.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-01]
gi|256637898|dbj|BAI03866.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-03]
gi|256640952|dbj|BAI06913.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-07]
gi|256644007|dbj|BAI09961.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-22]
gi|256647062|dbj|BAI13009.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-26]
gi|256650115|dbj|BAI16055.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-32]
gi|256653106|dbj|BAI19039.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656159|dbj|BAI22085.1| chromosome partitioning protein ParB [Acetobacter pasteurianus IFO
3283-12]
Length = 290
Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 5/205 (2%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGERRF 98
+ + +VP+P PR +F SE ++ L S+ GI+QP++VR + + I+AGERR+
Sbjct: 41 EVQLSELVPDPDQPRKFFNSEDIKALASSLSERGILQPILVREAEEGSAKWIIVAGERRW 100
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
RAA ++P I D ++VEN+ R DL+ +EEA G ++ ++Q++
Sbjct: 101 RAAASLGWEKLPAIEYEGD---YRAASLVENLLRTDLSAVEEARGLRNIMDLNNWSQSEA 157
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMS 218
G +G S+S V LRIL LP + + + + +V DP ++
Sbjct: 158 GRQLGLSQSRVNRTLRILDLPCAFLDFASAHAVPINVLVQIVREEDPTQQQVLMDRVMTG 217
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGS 243
E+ + K + I +
Sbjct: 218 SATVAEVQDLRKKTDTKSQNIADKK 242
>gi|219883219|ref|YP_002478381.1| parB-like partition protein [Cyanothece sp. PCC 7425]
gi|219867344|gb|ACL47682.1| parB-like partition protein [Cyanothece sp. PCC 7425]
Length = 324
Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 101/241 (41%), Gaps = 8/241 (3%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ T + + I I P R +F+ E L Q I+ G I + VR + + Y
Sbjct: 43 EGTPPTEQQTLNVPIDQIDRYPEQVRQWFDPTEQEKLTQLIQQVGFIGRIWVRRLSSDRY 102
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
++IAGERR R+A A L+ +PV + +VD++++L ++++EN+ R DLNP+EE G +L++
Sbjct: 103 QLIAGERRLRSAISAGLTHIPVEVLDVDDETALMLSLLENLNRVDLNPVEETEGMLRLLA 162
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
+ + + E ++ +
Sbjct: 163 SRLNYEVSEVKSLLYRMKNHYERGE-------EATPSEAEAFAMITKIFDMVGRVNWQSF 215
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH 269
+ + +++ +Q + + + ++++ + L I+ + L+ IK
Sbjct: 216 ITMRLRLLNLPSEILAALQQGKLEYTKATVIARIKDEDSRIQLLNDSIAFNLSLS-EIKD 274
Query: 270 R 270
R
Sbjct: 275 R 275
>gi|210613363|ref|ZP_03289683.1| hypothetical protein CLONEX_01890 [Clostridium nexile DSM 1787]
gi|210151205|gb|EEA82213.1| hypothetical protein CLONEX_01890 [Clostridium nexile DSM 1787]
Length = 301
Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 84/189 (44%), Gaps = 8/189 (4%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
E+ E I + + P ++P + E + + +SIK++G++ P +VR G
Sbjct: 20 EEAPEKSMNQVVEIELEKLHPFKNHPFRVSDDEKMAETVESIKNYGVLNPALVRPRSEGG 79
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y++I+G RR R ++ + +PV++RN + ++ I + N+QR+++ P E+A Y+
Sbjct: 80 YELISGHRRKRGCELCGKTTMPVLVRNYTDDEAVIIMVDSNIQRENILPSEKAHAYKMKY 139
Query: 149 SEYGYT--------QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
+ + +G G S V +R+ L + E + + +I + L
Sbjct: 140 DAMKHQGSKGEKYTADMVGETAGDSGRTVQRYIRLASLSDGLLEYVDENKIPMIVGEKLS 199
Query: 201 STSDPLSLA 209
Sbjct: 200 YLKPQEQEW 208
>gi|10957477|ref|NP_051545.1| ParB family chromosome partitioning protein [Deinococcus
radiodurans R1]
gi|12230477|sp|Q9RZV8|PARB3_DEIRA RecName: Full=Probable plasmid-partitioning protein parB
gi|6460906|gb|AAF12610.1|AE001826_79 chromosome partitioning protein, ParB family [Deinococcus
radiodurans R1]
Length = 291
Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 53/132 (40%), Positives = 86/132 (65%), Gaps = 7/132 (5%)
Query: 13 GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
GLAAL+GE + P + + + + PR F +EGL +L SI+S
Sbjct: 6 GLAALLGESAKLAQGP------VVGHTSTLRVDQLRAGSQQPRRQFGTEGLTELAASIQS 59
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
GI+QPL+VRA+ + Y+I+AGERR+RAA++A L+EVPVI++++ ++ + IA++EN+QR
Sbjct: 60 QGILQPLLVRAVGDT-YEIVAGERRWRAAQLAGLTEVPVIVKSLTDQEAAVIALIENLQR 118
Query: 133 KDLNPLEEALGY 144
++LN ++E G
Sbjct: 119 ENLNLIDEVEGK 130
>gi|254966505|gb|ACT97232.1| KorB [Synthetic plasmid pMOL98]
Length = 378
Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 16/242 (6%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+AL + I + I +P PR F E ++++ SI++
Sbjct: 5 LSAL---EEKPTAPAVAGAAQPTGKPLDIPLADIEEDPDQPRKEFTPEAMQEMTDSIRAR 61
Query: 74 GIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+ P+ VR+ + + + G RR+R + A +P + D ++EN+Q
Sbjct: 62 GVKTPVSVRSHPSKPGKWMLNYGARRYRGSHAAGRPTIPAFV---DEAHDDYDQVIENIQ 118
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R DL P+E AL ++ + G + DI +GK +A L ++ P+ + + +
Sbjct: 119 RDDLKPMELALFIKKRLDA-GDQKKDIAKRLGKGGGIIAKHLALIDPPACIEDAYSSGKC 177
Query: 192 SLGHA-------RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ A + +V + + ++ + + + +GS+
Sbjct: 178 TSPETLYELRGLHEKFPEQVEAWCADAGEITRKTVAELADELKGKKKPAPETGEGQQGSK 237
Query: 245 EK 246
Sbjct: 238 NP 239
>gi|153811691|ref|ZP_01964359.1| hypothetical protein RUMOBE_02084 [Ruminococcus obeum ATCC 29174]
gi|149832094|gb|EDM87179.1| hypothetical protein RUMOBE_02084 [Ruminococcus obeum ATCC 29174]
Length = 302
Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 73/136 (53%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I I P ++P + E ++DL +S+K +G++ P
Sbjct: 6 GEKIKLASIDELLGVVNEESAMEIEISKIHPFKNHPFKVLDDEKMQDLVESVKINGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R +N Y++++G RR AA++A L+ +P I+R + + ++ + N+QR++L P
Sbjct: 66 VLLRMDENEEYEMVSGHRRMHAAQLAGLTTIPAIVRELSDDDAIVAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYT 154
E+A Y+ +
Sbjct: 126 EKAFAYKMKLEAMKRQ 141
>gi|210614277|ref|ZP_03290148.1| hypothetical protein CLONEX_02361 [Clostridium nexile DSM 1787]
gi|210150761|gb|EEA81770.1| hypothetical protein CLONEX_02361 [Clostridium nexile DSM 1787]
Length = 300
Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 103/226 (45%), Gaps = 8/226 (3%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
ES I I I P ++P + E ++DL +S+K +G++ P+++R +N Y++++
Sbjct: 21 VNEESAMEIEISKIHPFKNHPFKVLDDEKMQDLVESVKINGVLTPVLLRMDENEEYEMVS 80
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
G RR AA++A L+ +P I+R + + ++ + N+QR++L P E+A Y+ +
Sbjct: 81 GHRRMHAAQLAGLTTIPAIVRELSDDDAIVAMVDANIQREELLPSEKAFAYKMKLDAMKR 140
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
+ + +S + + V E R + + + D + ++
Sbjct: 141 QGSRTDLTLCQSGTKSRTDQLLG---EQVGESARSVQRYIRLTELIPELLDLVDNKKLQF 197
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS 259
+ +++ ++ VQ + I + K K + L +++
Sbjct: 198 TVAVNISYIDKEVQGW-----IYEYISDTGFIKPKQIAALRNQLND 238
>gi|295116008|emb|CBL36855.1| ParB-like partition proteins [butyrate-producing bacterium SM4/1]
Length = 308
Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 79/194 (40%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + + E E I + + P ++P + E ++ +SI G++
Sbjct: 10 LNTYADIFSTEQSRAEDRLEKVREIPLAELHPFKNHPFKVLDDESMQRTVESIARFGVLS 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P I R +G Y+++AG RR A ++ + +PVI+R++D+ ++ + + N+QR+ + P
Sbjct: 70 PAIARPSPDGGYELVAGHRRHHACELVGMETMPVIVRDLDDDAATILMVDSNLQRETILP 129
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
E A Y+ + + + + + K I++
Sbjct: 130 SERAFAYKMKLEAMRHQGERTDLTSRQVVGKLEAADMLGKDTGESGRQIQRFIRLTELIP 189
Query: 198 TLVSTSDPLSLAQV 211
L+ D +A
Sbjct: 190 ELLDMVDQKQIAFN 203
>gi|298484387|ref|ZP_07002546.1| ParB family protein [Bacteroides sp. D22]
gi|298269451|gb|EFI11053.1| ParB family protein [Bacteroides sp. D22]
Length = 142
Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + +++ +I P+ NPR F+ L +L +SIK G++QP+ VR +D
Sbjct: 2 KTKANQSAAERNITMVALANIQPSGFNPRKRFDETSLYELAESIKRQGVLQPITVRPVDG 61
Query: 87 GLYKII-AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
I GERR+RA+ +A E+P I+ + ++ + E+AI EN+QRKD+ P+EEA Y+
Sbjct: 62 TDRYGIVFGERRYRASVIAGRDEIPAIVSELSDEEAEEMAITENLQRKDVTPVEEAAAYQ 121
Query: 146 QLISEYGYTQNDI 158
+LI +T +
Sbjct: 122 RLIESGRHTVRPV 134
>gi|325678146|ref|ZP_08157776.1| putative nucleoid occlusion protein [Ruminococcus albus 8]
gi|324110151|gb|EGC04337.1| putative nucleoid occlusion protein [Ruminococcus albus 8]
Length = 307
Score = 60.5 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 1/188 (0%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L I + I P + I + SI PNP PR +F ++ L L +SI ++
Sbjct: 28 LTDFISKAFIEISEPPNEELRELGRVVEIGVGSIKPNPSQPRRHFAADELTALAKSISAN 87
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
GIIQPL VR + G +++I+GERR RAAK+A L VP II D S +A++EN+QR
Sbjct: 88 GIIQPLTVRQTEEG-FELISGERRLRAAKLAGLKSVPCIIVKADRGRSAVLALLENIQRS 146
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
DLN EEA L+ T+ + +G ++S +AN LR+L+L +++I + +S
Sbjct: 147 DLNCFEEAAAISALLDSGKVTREEAALKLGLAQSTIANKLRLLRLSRDEQKLICEHGLSE 206
Query: 194 GHARTLVS 201
HAR L+
Sbjct: 207 RHARALLK 214
>gi|291540505|emb|CBL13616.1| ParB-like partition proteins [Roseburia intestinalis XB6B4]
Length = 292
Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 58/309 (18%), Positives = 122/309 (39%), Gaps = 35/309 (11%)
Query: 1 MSN--NYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ + +K +L L G+ + E I++ + +P
Sbjct: 1 MNKTGSAAKVKLNS-FDDLFGDGQP---------QAGIEQVQEIALSELYEFKGHPFKVL 50
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ E +++ +S++ HG++ P I R G Y+IIAG RR A ++ L +P+ IRN +
Sbjct: 51 DDEKMQETVESVREHGVLMPGIARPRAEGGYEIIAGHRRRHACELVGLDTMPMFIRNYTD 110
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ--------NDIGSIVGKSRSHVA 170
+ I + N+QR+D+ P E+A Y + +++G G+S V
Sbjct: 111 DEATIIMVDSNIQREDILPSEKAKAYRMKYEAMKHQGSRAGGLTLDELGGAAGESAKTVQ 170
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
+ I +L + +M+ +I + A + S+ ++ + + T++
Sbjct: 171 RYIWISRLSEPLLDMVDSGKIGIMQAVDISFLSEDAQQWVLVAIQDTNAVITKQQSAMLK 230
Query: 231 NKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKY---ETNEQLK 287
+K + F R + +E+ + IK + + + + ++
Sbjct: 231 ESDKKGELTFPMVRMLLEKEKPVER--------KVVIKTE----RINSYFPDTYSTDDIE 278
Query: 288 IICSLLGEN 296
I L +N
Sbjct: 279 KIIFQLLDN 287
>gi|300115641|ref|YP_003762215.1| ParB-like partition protein [Nitrosococcus watsoni C-113]
gi|299541583|gb|ADJ29894.1| parB-like partition protein [Nitrosococcus watsonii C-113]
Length = 284
Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/154 (36%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGE 95
+ + ++ NP PR F+ L++L SI+ HG+IQP+ V + Y ++AGE
Sbjct: 26 RIIEVDLSNLRENPDQPRKTFDETALQELAASIEQHGLIQPIAVASDPENKEGYMVVAGE 85
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA K +P I+ + EIA++EN+QR++LNPLEEA Q++S + YTQ
Sbjct: 86 RRLRAFKRLGRETIPAIVTQGN---RDEIALIENLQRENLNPLEEAEALAQIMSRHAYTQ 142
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
N++ ++GK+R+ V +LR+ LP ++E R
Sbjct: 143 NEVSKVIGKARNTVNELLRLNTLPQGIKEEYRSR 176
>gi|171911254|ref|ZP_02926724.1| ParB family protein [Verrucomicrobium spinosum DSM 4136]
Length = 857
Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 9/233 (3%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
I + I P+P+N R F+ L +L S+K HG + +VR + G Y+++AGERR+RA
Sbjct: 17 DIPLALIDPSPYN-RTRFDEGKLNELAGSLKLHGQLDDALVRPKEGGRYELVAGERRWRA 75
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG------YT 154
+A + I+ + + + E+ +VE +Q ++ + +EEA G+ L+S YT
Sbjct: 76 CPLAGFVSLRAKIKEMTDNEAHELVLVEQLQHEEWSVVEEARGFASLMSLKDGEGAPLYT 135
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI--SLGHARTLVSTSDPLSLAQVI 212
+ KS +++ +L IL P ++ + + E+ + + + LA +
Sbjct: 136 LEKCAVRIDKSENYIRELLAILDAPQELQAAVERGELAKASAAVVASIPDREQRELAGKM 195
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
V + + V E + R ++ L ++ G +
Sbjct: 196 VLRPANKTSGPLSVLETKELIKDRFARSLQGAPFKQADALLVPEMKDIAGARV 248
>gi|77163531|ref|YP_342057.1| ParB-like partition protein [Nitrosococcus oceani ATCC 19707]
gi|254436411|ref|ZP_05049916.1| ParB-like nuclease domain family [Nitrosococcus oceani AFC27]
gi|76881845|gb|ABA56527.1| chromosome segregation DNA-binding protein [Nitrosococcus oceani
ATCC 19707]
gi|207087945|gb|EDZ65219.1| ParB-like nuclease domain family [Nitrosococcus oceani AFC27]
Length = 284
Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/154 (36%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGE 95
+ + ++ NP PR F+ L++L SI+ HG+IQP+ V + Y ++AGE
Sbjct: 26 RIIEVDLSNLRENPDQPRKTFDETALQELAASIEQHGLIQPIAVASDPENKEGYMVVAGE 85
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA K +P I+ + EIA++EN+QR++LNPLEEA Q++S + YTQ
Sbjct: 86 RRLRAFKRLGRETIPAIVTQGN---RDEIALIENLQRENLNPLEEAEALAQIMSRHAYTQ 142
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
N++ ++GK+R+ V +LR+ LP ++E R
Sbjct: 143 NEVSKVIGKARNTVNELLRLNTLPQGIKEEYRSR 176
>gi|187928679|ref|YP_001899166.1| parB-like partition protein [Ralstonia pickettii 12J]
gi|241114234|ref|YP_002973709.1| parB-like partition protein [Ralstonia pickettii 12D]
gi|187725569|gb|ACD26734.1| parB-like partition protein [Ralstonia pickettii 12J]
gi|240868807|gb|ACS66465.1| parB-like partition protein [Ralstonia pickettii 12D]
Length = 554
Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 95/170 (55%), Gaps = 3/170 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ + + I P NPR YF+ + ++ +SI+ G+IQP++VR +++G Y+++A
Sbjct: 2 QENQQSVTVKLGQIRPGK-NPRKYFDPAKMAEITESIREDGVIQPVLVRPLEDGTYELVA 60
Query: 94 GERRFRAAKMAS--LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
GERR+R AK A ++PV+IR + + +A++ENVQR D+ P EEA+ ++ +
Sbjct: 61 GERRYRGAKAACGDDYDMPVVIREMTEGEARRLALIENVQRADMAPSEEAVAAADIVGDL 120
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+++ +G RS + L ++ +V + + I LGHA L +
Sbjct: 121 KGDRDEAARQLGWPRSTLDRRLALMNCSPAVLDALNTRSIQLGHAELLAT 170
>gi|72383981|ref|YP_293335.1| ParB family protein [Ralstonia eutropha JMP134]
gi|72123324|gb|AAZ65478.1| ParB family protein [Ralstonia eutropha JMP134]
Length = 323
Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 62/244 (25%), Positives = 103/244 (42%), Gaps = 10/244 (4%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+++ IVPNP PR F L DL +SI+ G++QP++VR ++G Y+I+AGERR+RA
Sbjct: 60 QLAVAEIVPNPWQPRRVFNDSKLSDLAESIREVGLMQPIVVRRAESG-YQIVAGERRWRA 118
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
KM + ++ + +A+VENV R DL E AL Q E+ +++ +
Sbjct: 119 HKMLGAETIKAVVAEPTDADMAVLALVENVSRDDLADYEIALSIRQTEKEFP-SRSRLAE 177
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEI---SLGHARTLVSTSDPLSLAQVIVSKKM 217
+G SRS + L +LP V + + +++ +
Sbjct: 178 ALGLSRSGLYRFLSFAQLPDYVIRDLELQPSLLGGTAAEAMVMTIRKYGEAGDAAAKEIW 237
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS--SKVGLNISIKHRNNKGQ 275
+ T ++ Q + K + ++K S G SI N
Sbjct: 238 PLVATGKMDQGKAASAIKALATQRANTPSSASERSIDKFFSGKEHAG---SITKDANGFT 294
Query: 276 FCIK 279
IK
Sbjct: 295 IKIK 298
>gi|307591516|ref|YP_003900315.1| parB-like partition protein [Cyanothece sp. PCC 7822]
gi|306986370|gb|ADN18249.1| parB-like partition protein [Cyanothece sp. PCC 7822]
Length = 388
Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ E ++ ++ I I ++ PNP PR F E L L +S++ G QP++V
Sbjct: 48 AEEKKVKELRSSLTEQTIIEIKIENLQPNPQQPRQTFSEENLLVLARSLEQDGQQQPILV 107
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVP 110
ID + I GERR+RAA+ + +
Sbjct: 108 FQIDATTFLIFDGERRYRAAQKINWQTLQ 136
>gi|218778136|ref|YP_002429454.1| parB-like partition protein [Desulfatibacillum alkenivorans AK-01]
gi|218759520|gb|ACL01986.1| parB-like partition protein [Desulfatibacillum alkenivorans AK-01]
Length = 569
Score = 60.1 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL----- 88
++ I + I P+P NPR F+ +G+++L +SI+S G+++P++VR +
Sbjct: 2 EEKQTFREIPLDQITPSPENPRKTFDGKGMDELVESIRSVGVLEPILVRPREAQPVKKAR 61
Query: 89 -------------YKIIAGERRFRAAKMASLSE-------VPVIIRNVDNKSSLEIAIVE 128
++I+AGERRFRA + + +P ++R + + + + ++E
Sbjct: 62 GKKILTASTESQAFEIVAGERRFRACCILANQNGGLSKNTIPAMVRPMTDDQAWDAMVIE 121
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQ-NDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
N+ R+DL+ LEEA G++ + G D+ G S ++ +R+L LP V E
Sbjct: 122 NLARQDLDELEEARGFKAYLDRKGPESLEDLAGRTGISPGYIRRRVRVLDLPEKVLEAWD 181
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
+ + GH L+ D ++ + +EL
Sbjct: 182 GDALRFGHLEQLLRLPDQEAVLEFFNHFAWETVSVKEL 219
>gi|294627800|ref|ZP_06706380.1| parB-like partition protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292597896|gb|EFF42053.1| parB-like partition protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 375
Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 17/243 (6%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+AL N D I I I +P+ PR F E ++DL ++IK
Sbjct: 4 LSAL----NAKQDDEVTPVSEPDGKPFRIPIADIERDPNQPRTEFSDEEIDDLAENIKDR 59
Query: 74 GIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+ P+ V+ ++ I GE R+ A++ A ++++P I+ + A +
Sbjct: 60 GVKLPISVKTHPTKPGMWMINDGELRWLASQRAGVADIPAIVDEDFDDFDQVNANEKRYA 119
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
+ + + + + G + I +GK + + +L ++ P+ V E
Sbjct: 120 LRPIELAQ----FIKRKLSDGLKKGVIAKRLGKPANAITELLSLVDAPACVTEAYSSGRC 175
Query: 192 SL-------GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ + + SV + ++E+
Sbjct: 176 TSPKTLYELRALAEKYPDQVQEWCDSDVEITRASVAALGDSLKEKKAPNPSDPAAGAAGA 235
Query: 245 EKE 247
+
Sbjct: 236 NPD 238
>gi|83749697|ref|ZP_00946676.1| ParB [Ralstonia solanacearum UW551]
gi|207738538|ref|YP_002256931.1| partitioning protein [Ralstonia solanacearum IPO1609]
gi|83723622|gb|EAP70821.1| ParB [Ralstonia solanacearum UW551]
gi|206591906|emb|CAQ58812.1| partitioning protein [Ralstonia solanacearum IPO1609]
Length = 334
Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 57/294 (19%), Positives = 106/294 (36%), Gaps = 19/294 (6%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPES-QDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
RGL +G+ + S E +T E I + + NP N R ++ + +++ SI
Sbjct: 41 RGL---LGQPARPAFSAESQTAVTSERRVVKIPLDRLQENPLNARRIYDPQVVQERAASI 97
Query: 71 KSHGIIQPLIVRAID--NGLYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAIV 127
+HG P + + G Y +I G R RA A I + + ++ V
Sbjct: 98 ATHGQQTPGLAASDPARPGWYVLIDGHYRKRALAAAGKAEMECFIEDGLSDIDFYRLSFV 157
Query: 128 ENVQRKDLNPLEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
N QR + L+ A+ + + L + DI I G S V L +LKLP SV +++
Sbjct: 158 LNEQRSGQSALDNAIAWRQLLDDGKVKKEEDICEITGVSAGTVNKTLALLKLPESVLDVM 217
Query: 187 --RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
R I + L + + + + +K ++ +
Sbjct: 218 KERPTGIGIATGYELTLYFKSAGEDKTRELVHRVLEEGLSSRDVEQIRKVAQEGRTRKVK 277
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQ---LKIICSLLGE 295
E + + +G IK + G+ + + + + + L
Sbjct: 278 EVSRQYK-IRNDRGDLLGT---IKEW-DSGRVMLDVK-LDDRAARESLVEALKS 325
>gi|226322803|ref|ZP_03798321.1| hypothetical protein COPCOM_00575 [Coprococcus comes ATCC 27758]
gi|225208784|gb|EEG91138.1| hypothetical protein COPCOM_00575 [Coprococcus comes ATCC 27758]
Length = 301
Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 13/238 (5%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L AL G E I+I S+ P ++P + + +E+L +SI +
Sbjct: 15 LDALFGT-----------NEETTNGISEIAIGSLHPFTNHPFQVRDDKKMEELTESITQY 63
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++ P IVR ++G Y+++AG RR RA ++A L ++PVII+++ + + I + N+QR+
Sbjct: 64 GVLVPGIVRLRESGGYELVAGHRRKRACELAGLEKMPVIIKDLTDDEATVIMVDSNIQRE 123
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
+L E+A Y+ + +A S R+++R ++
Sbjct: 124 ELLISEKAFAYKMKYEALKRQGKRSDLTSCQVGKKLAAEEVSQNTGDSSRQILRYIHLTE 183
Query: 194 --GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
L V VS + L ++ K + ++ K
Sbjct: 184 LIAELLELADEKKLPFNTAVEVSYLRTEEQQILLQYMSNHNMVPSMKQAKELKQISKE 241
>gi|300693047|ref|YP_003749020.1| plasmid partition protein [Ralstonia solanacearum PSI07]
gi|299075084|emb|CBJ34365.1| plasmid partition protein [Ralstonia solanacearum PSI07]
Length = 334
Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 58/294 (19%), Positives = 106/294 (36%), Gaps = 19/294 (6%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPES-QDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
RGL +G+ + S E + ET E I + + NP N R ++ + +++ SI
Sbjct: 41 RGL---LGQPARPAFSAESQIETRSERRVVKIPVDRLQENPLNARRIYDPQIVQERAASI 97
Query: 71 KSHGIIQPLIVRAID--NGLYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAIV 127
+HG P + G Y +I G R RA A I + + ++ V
Sbjct: 98 ATHGQQTPGLAAPDPARPGWYVLIDGHYRKRALAAAGKAEMECFIEDGLSDIDFYRLSFV 157
Query: 128 ENVQRKDLNPLEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
N QR + L+ A+ + + L + DI I G S V L +LKLP SV +++
Sbjct: 158 LNEQRSGQSALDNAIAWRQLLDDGKVKKEEDICEITGVSAGTVNKTLALLKLPESVLDVM 217
Query: 187 --RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
R I + L + + + + +K ++ +
Sbjct: 218 KERPTGIGIATGYELTLYFKSAGEDKTRELVHRVLEEGLSSRDVEQIRKVAQEGRTRKVK 277
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQ---LKIICSLLGE 295
E + + +G IK + G+ + + + + + L
Sbjct: 278 EVSRQYK-IRNDRGDLLGT---IKEW-DSGRVMLDVK-LDDRAARESLVEALKS 325
>gi|86141435|ref|ZP_01059981.1| putative partitioning protein [Leeuwenhoekiella blandensis MED217]
gi|295133611|ref|YP_003584287.1| partitioning protein [Zunongwangia profunda SM-A87]
gi|85831994|gb|EAQ50449.1| putative partitioning protein [Leeuwenhoekiella blandensis MED217]
gi|294981626|gb|ADF52091.1| putative partitioning protein [Zunongwangia profunda SM-A87]
Length = 595
Score = 59.7 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ ++ +SI +I P+P PR F + L+ L +SI+ HG++Q I
Sbjct: 14 AKSTAKKEVNGKKSSVHQIQNLSIGNIKPDPEQPRKTFNEDALKQLSESIEKHGVLQ-PI 72
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
NG Y I+ GERR+RA+K+A VP I+R +N LE+ I+EN+QR+D+ P EE
Sbjct: 73 TVRQLNGHYVIVMGERRYRASKLAGKKTVPCIVRTYENNDVLEVQIIENLQRQDVEPTEE 132
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A L Y +I +G++ + + L++ L ++ +R E+++ +
Sbjct: 133 AEAIAYLSE--RYVPTEIAKRLGRTNNFIRQRLKLAGLIEGFKQFVRNGEMTISLGVGVA 190
Query: 201 STSDPLSLAQ-VIVSKKMSVRDTEELVQ 227
+ + + +++
Sbjct: 191 LFEPEEQQMMLETMGEDFNAHQINRMIK 218
>gi|17548225|ref|NP_521565.1| putative partitioning protein [Ralstonia solanacearum GMI1000]
gi|17430471|emb|CAD17155.1| putative partitioning protein [Ralstonia solanacearum GMI1000]
Length = 334
Score = 59.3 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 59/294 (20%), Positives = 106/294 (36%), Gaps = 19/294 (6%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPES-QDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
RGL +G+ + S E + ET E I + + NP N R ++ + +++ SI
Sbjct: 41 RGL---LGQPARPAFSAESQAETSSERRVVKIPLERLQENPLNARRIYDQQIVQERAASI 97
Query: 71 KSHGIIQPLIVRAID--NGLYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAIV 127
+HG P + G Y +I G R RA A I + + ++ V
Sbjct: 98 ATHGQQTPGLAAPDPAKPGWYVLIDGHYRKRALAAAGKAEMECFIEDGLSDIDFYRLSFV 157
Query: 128 ENVQRKDLNPLEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
N QR + L+ A+ + + L + DI I G S V L +LKLP SV E++
Sbjct: 158 LNEQRSGQSALDNAIAWRQLLDDGKVKKEEDICEITGVSAGTVNKTLALLKLPESVLEVM 217
Query: 187 --RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
R I + L + + + + +K ++ +
Sbjct: 218 KERPTGIGIATGYELTLYFKSAGEDKTRDLVHRVLEEGLSSRDVEQIRKVAQEGRTRKVK 277
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQ---LKIICSLLGE 295
E + + +G IK + G+ + + + + + L
Sbjct: 278 EVSRQYK-IRNDRGDLLGT---IKEW-DSGRVMLDVK-LDDRAARESLVEALKS 325
>gi|94992654|ref|YP_600753.1| chromosome partitioning protein parB [Streptococcus pyogenes
MGAS2096]
gi|94546162|gb|ABF36209.1| Chromosome partitioning protein parB [Streptococcus pyogenes
MGAS2096]
Length = 321
Score = 59.3 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 93/242 (38%), Gaps = 2/242 (0%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E + E I I I P +P E +E L SIK +G++
Sbjct: 21 LTAYDDLFQTDESRAEAALSKIRDIPISEIDEFPDHPFKVLMDEDMEQLVDSIKRNGVMT 80
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++I+G RR +A ++A L + ++ ++ + + N+QR + P
Sbjct: 81 PATVRLKEDGRYELISGHRRKKACELAGLDTLKCEVKEFSRDEAIIVMVESNLQRTTILP 140
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
E+A Y+ + + S + + RE IR+
Sbjct: 141 SEKAFAYKMRLEAMNRQGQRLDLASTPMVSKSRSNEELADKVGESREQIRRYIRLTELVP 200
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
++ D +A + + + ++ + + + + +KY+ E K+
Sbjct: 201 EILQMVDERQIAFRPAVEISYLSEEQQYTLLEAMEYNDATPSLAQAIKMKKYMQ--EGKL 258
Query: 258 SS 259
+
Sbjct: 259 TD 260
>gi|331086937|ref|ZP_08336013.1| hypothetical protein HMPREF0987_02316 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409598|gb|EGG89037.1| hypothetical protein HMPREF0987_02316 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 302
Score = 59.3 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 103/241 (42%), Gaps = 5/241 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I+ I +P + E + DL +S+K++G++ P
Sbjct: 6 GEKIKLTSIDELLGVVNEESAMEIEINRIHAFKDHPFKVLDDEKMADLVESVKTYGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R+ Y++I+G RR AA +A L+ +P I+R++ + ++ + N+QR++L P
Sbjct: 66 VLLRSDGENGYEMISGHRRMHAAVIAGLATIPAIVRDLSDDDAVIAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
E+A Y+ + + L V E ++ + +
Sbjct: 126 EKAFAYKMKLDAMKRQAGRPSQKNSGQNDQNFGKVSRDVLAKEVGESSKQIQRYIRLTEL 185
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
+ D + ++ + + + ++ +Q+ + I + K K +T L K++
Sbjct: 186 IPELLDMVDAKKLNFTIAVDISYIDKEMQKW-----IYEYIRDTGFIKPKQITVLRKQLE 240
Query: 259 S 259
Sbjct: 241 E 241
>gi|331001379|ref|ZP_08325002.1| ParB-like protein [Parasutterella excrementihominis YIT 11859]
gi|329568601|gb|EGG50404.1| ParB-like protein [Parasutterella excrementihominis YIT 11859]
Length = 381
Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
I S +K I + I P+P+ PR F L +L SI+ +G++QP++VR
Sbjct: 9 SKIASGKKSVLNTEGKILDIELDKIKPDPNQPRKQFNDAELSELSASIQEYGLLQPIVVR 68
Query: 83 AIDNGLYKIIAGERRFRAAK 102
A + + II+GERRFRA++
Sbjct: 69 ANSDDTFTIISGERRFRASQ 88
>gi|295108415|emb|CBL22368.1| ParB-like partition proteins [Ruminococcus obeum A2-162]
Length = 295
Score = 59.3 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 53/287 (18%), Positives = 118/287 (41%), Gaps = 36/287 (12%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ + + ++ + P ++P + + E + + +SIK++GI+ P +VR G
Sbjct: 20 NEAEQNTLNQIVEVPLNELHPFRNHPFHVNDDEKMAETVESIKNYGILNPALVRPRAEGG 79
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y++IAG RR R ++A S++PV+IRN + ++ + + N+QR++L P E+A Y+ +
Sbjct: 80 YELIAGHRRKRGCELAGKSKMPVLIRNYTDDEAVIVMVDSNIQRENLLPSEKAYAYKMKM 139
Query: 149 SEYGYTQND------------IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
+ +G G S V +R+ L + +++ + +I+
Sbjct: 140 DAVKHQGIKEENAVSVDSADLVGQAAGDSGRTVQRYIRLTCLIPELLKLLDEGKINFTVG 199
Query: 197 RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+L S+ + + T + + ++ LT+L +
Sbjct: 200 VSLTYLSEMEQIWVKDCIVSGASSVTGSMATKLKQYSDEG------------NLTELAVQ 247
Query: 257 I---SSKVGL-NISIKHRNNKGQFCIKY---ETNEQLKI-ICSLLGE 295
+ K +++ + + + EQ++ I LL
Sbjct: 248 LILNEKKTETGKVTLTEK----KIRKYFPKEYNREQIEQVIYELLDN 290
>gi|291615495|ref|YP_003522603.1| parB-like partition protein [Nitrosococcus halophilus Nc4]
gi|291582557|gb|ADE17013.1| parB-like partition protein [Nitrosococcus halophilus Nc4]
Length = 284
Score = 58.9 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 20/249 (8%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGE 95
I + ++ NP PR F+ L++L SI+ H +IQP+ V Y ++AGE
Sbjct: 26 RIIEIDLKNLRENPDQPRKVFDETALQELADSIEQHELIQPIAVAPDPENEDGYIVVAGE 85
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RRFRA K +P I+ + EIA++EN+QR DLNPLEEA EQ++ Y YTQ
Sbjct: 86 RRFRAFKQLGRETIPAIVTQGN---HDEIALIENLQRVDLNPLEEAEALEQIMDRYDYTQ 142
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ ++GK+R+ V +LR+ LP ++E R +++++ + +
Sbjct: 143 IELSKVIGKARNTVNELLRLNTLPQEIKEEYRSRTSDSVVSKSVLIELTRIKNKDKQLKL 202
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKE------KYLTDLE---------KKISSK 260
++ + + K+E S + ++ LE ++ S+
Sbjct: 203 WEELKAGATVRVARKAKREGTANKMSSSPAMQLLSAGRRFTKKLEGIAAHDLNNEQFSTL 262
Query: 261 VGLNISIKH 269
+ L I +
Sbjct: 263 LELREKIDN 271
>gi|16751954|ref|NP_444538.1| hypothetical protein pIPO2T_p10 [Plasmid pIPO2T]
gi|16610022|emb|CAC82768.1| hypothetical 40 kDa protein [Plasmid pIPO2T]
Length = 379
Score = 58.9 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 8/224 (3%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+AL + I + I +P PR F E ++++ SI++
Sbjct: 5 LSAL---EEKPTAPAVAGAAQPTGKPLDIPLADIEEDPDQPRKEFTPEAMQEMTDSIRAR 61
Query: 74 GIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+ P+ VR + + + G RR+R + A +P + + I ++
Sbjct: 62 GVKTPVSVRTHPSKPGKWMLNYGARRYRGSHAAGRKTIPAFVDESHDDYDQVIENIQRDD 121
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGS---IVGKSRSHVANILRILKLPSSVREMIRK 188
K + + ++G I+ + + + I S+ + K
Sbjct: 122 LKPMELALFIKKRLDAGDQKKAIAKNLGKDGAIITQHLALIDPPACIEDAYSNGKCTSPK 181
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
L A + +V D + ++ +
Sbjct: 182 TLYELRGLHEKFPEKVEAWCADAAEITRKTVADLADELKGKKKP 225
>gi|331004545|ref|ZP_08328014.1| hypothetical protein HMPREF0491_02876 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410653|gb|EGG90077.1| hypothetical protein HMPREF0491_02876 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 292
Score = 58.9 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 52/247 (21%), Positives = 111/247 (44%), Gaps = 16/247 (6%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
++ ++ E I++ + +P + E ++++ +SI+ +G++ P I R + G Y
Sbjct: 22 EQPQSGIEQVQEIALTELHEFKEHPFKVLDDEKMQEMIESIREYGVLMPGIARPMKGGGY 81
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+IIAG RR A +M LS +P+ IR+ + + I + N+QR+D+ P E++ Y
Sbjct: 82 EIIAGHRRKYACEMVGLSTMPMFIRDYTDDEATIIMVDSNIQREDILPSEKSKAYRMKYD 141
Query: 150 EYGYTQN--------DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+ + ++G G+S V + I +L + +M+ ++I + A L
Sbjct: 142 AMKHQGSKAGGLTLGELGEAAGESAKTVQRYIWISRLADELLDMVDTKKIGIMQAVDLSF 201
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
S+ + + V ++ ++ T +K + F R + + +E+
Sbjct: 202 LSEDVQQWVLAVIQETNIIITTLQSSMLKESYKKGELTFPMVRMVLEKVKTVER------ 255
Query: 262 GLNISIK 268
+ IK
Sbjct: 256 --KVVIK 260
>gi|331089000|ref|ZP_08337907.1| hypothetical protein HMPREF1025_01490 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330406452|gb|EGG85965.1| hypothetical protein HMPREF1025_01490 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 311
Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 93/242 (38%), Gaps = 2/242 (0%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E + E I I I P +P E +E L SIK +G++
Sbjct: 11 LTAYDDLFQTDESRAEAALSKIRDIPISEIDEFPDHPFKVLMDEDMEQLVDSIKRNGVMT 70
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++I+G RR +A ++A L + ++ ++ + + N+QR + P
Sbjct: 71 PATVRLKEDGRYELISGHRRKKACELAGLDTLKCEVKEFSRDEAIIVMVESNLQRTTILP 130
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
E+A Y+ + + S + + RE IR+
Sbjct: 131 SEKAFAYKMRLEAMNRQGQRLDLTSTPMVSKSRSNEELADKVGESREQIRRYIRLTELVP 190
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
++ D +A + + + ++ + + + + +KY+ E K+
Sbjct: 191 EILQMVDERQIAFRPAVEISYLSEEQQYTLLEAMEYNDATPSLAQAIKMKKYMQ--EGKL 248
Query: 258 SS 259
+
Sbjct: 249 TD 250
>gi|158339515|ref|YP_001520904.1| ParB family chromosome partitioning protein [Acaryochloris marina
MBIC11017]
gi|158309756|gb|ABW31372.1| chromosome partitioning protein, ParB family, putative
[Acaryochloris marina MBIC11017]
Length = 302
Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 74/124 (59%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
S++S + + + I I I P R YF+ + L S++ GI++ LIV
Sbjct: 3 GSSLESLDNDVDQESDKIAVIPIDKIKRTPDQVRRYFDPMKMNQLVSSVRIDGILENLIV 62
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
++++G +++I+GERR RAAK L+EVPV I N+D + I+++EN+QR+DLNP+EE
Sbjct: 63 SSLNDGKFQLISGERRLRAAKEVGLTEVPVKILNLDEFDAFRISLIENLQREDLNPVEET 122
Query: 142 LGYE 145
G
Sbjct: 123 DGII 126
>gi|51492523|ref|YP_067820.1| transcriptional repressor protein KorB [Aeromonas punctata]
gi|190570406|ref|YP_001966827.1| ParB-like partition protein [Aeromonas hydrophila]
gi|51470566|emb|CAG15057.1| transcriptional repressor protein KorB (parB family) [Aeromonas
caviae]
gi|89243353|gb|ABD64838.1| ParB-like partition protein [Aeromonas hydrophila]
Length = 452
Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 81/242 (33%), Gaps = 9/242 (3%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+ L+G + + E + I I P+P+N R + + +L S+K+
Sbjct: 16 LSDLMGGPGAAPVEAAEP-ENNNLLIREVPISKIHPDPNNSRQRVDPAKITELADSMKAV 74
Query: 74 GI---IQPLIVRAIDNGLYKIIAGERRFRAAKMASL---SEVPVIIRNVDNKSSLEIAIV 127
Q + + + + GE A L + + + E
Sbjct: 75 SKVTGKQRGVKNPLSLKPHPELEGEFMINAGYRRYLAAQEAGLDTVPAFIDSDADEYDNA 134
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
+ +++ E + Q + G +++I +GK S V++ + +LP +RE+
Sbjct: 135 VDNIQREGLTALEMAHFIQRQIDNGDKKSEIAGKLGKPASFVSDHISFFELPDCIRELYD 194
Query: 188 KEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
A + S + + + M D +EL + K +
Sbjct: 195 SGRCVSVQALAILHRSFKNYPDEVETYCIESMVAEDGDELTTADVRRFCNDLKNPSTEPD 254
Query: 246 KE 247
+
Sbjct: 255 SD 256
>gi|291545542|emb|CBL18650.1| ParB-like partition proteins [Ruminococcus sp. SR1/5]
Length = 301
Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L AL G E I+I S+ P ++P + + +E+L +SI +
Sbjct: 15 LDALFGT-----------NEETTNGISEIAIGSLHPFTNHPYQVRDDKKMEELAESITQY 63
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++ P IVR ++G Y+++AG RR RA +++ L ++PVII+++ + + I + N+QR+
Sbjct: 64 GVLVPGIVRLRESGGYELVAGHRRKRACELSGLEKMPVIIKDLTDDEATVIMVDSNIQRE 123
Query: 134 DLNPLEEALGYEQLI 148
+L E+A Y+
Sbjct: 124 ELLISEKAFAYKMKY 138
>gi|116693964|ref|YP_728175.1| chromosome partitioning protein ParB [Ralstonia eutropha H16]
gi|113528463|emb|CAJ94810.1| chromosome partitioning protein ParB [Ralstonia eutropha H16]
Length = 337
Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 8/139 (5%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
GRG + + I + + NP N R ++ +++ SI
Sbjct: 46 GRG-----ADGAPVFSAESLGEAAAGRQLIRIPLEQLHDNPLNARRLYDPAVVQERAASI 100
Query: 71 KSHGIIQPLIVRAID--NGLYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAIV 127
+HG P + G Y +I G R RA A L + ++ + ++ +
Sbjct: 101 ATHGQKTPGLAAPDPARPGHYILIDGHYRKRALASAGKLEMECFVENDLSDLDFYRLSFM 160
Query: 128 ENVQRKDLNPLEEALGYEQ 146
N QR D + L+ A+ + Q
Sbjct: 161 LNEQRSDQSALDNAIAWRQ 179
>gi|297567889|ref|YP_003686859.1| parB-like partition protein [Meiothermus silvanus DSM 9946]
gi|296852338|gb|ADH65351.1| parB-like partition protein [Meiothermus silvanus DSM 9946]
Length = 333
Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 78/249 (31%), Gaps = 6/249 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ E I + + + + P+P+ PR +F+ + +E L + I+ +G++ PL
Sbjct: 2 NDAPEFPKITRPLEYIALTVEEAPVDLLRPHPNQPRRFFDPKAMEQLKEDIRQNGVLTPL 61
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+V A I++GERR+RAA+ + VP + D+ +L +
Sbjct: 62 LVEA-SAEGLYIVSGERRWRAAQELGMPTVPCLFLRGDSGHTLMYSTNLQEPLSVYERYR 120
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR-----ILKLPSSVREMIRKEEISLG 194
+ + R + ++++ L
Sbjct: 121 FLWQVVHRVYRAFRNDLTLEGTANILRYIHNPHNPRLASRVPDWALERFAYLKEDAEMLL 180
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
+ LA ++ E + I + R + E
Sbjct: 181 KSLGSSLKEAAGFLAAWEGLHPLTQEALEAGKTYWKGAQRISAWIKKMRRALPGHPELEE 240
Query: 255 KKISSKVGL 263
+ + + +
Sbjct: 241 DNLRAFIEM 249
>gi|116329578|ref|YP_799297.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332467|ref|YP_802184.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116122471|gb|ABJ80364.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116127334|gb|ABJ77426.1| ParB-like protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 235
Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 4/215 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
S I + IVPNP PR F E + DL +S+K G+I+P++VR Y+I+A
Sbjct: 18 EKESSSSEIQVSDIVPNPSQPR-VFGKEEVSDLVESMKRLGLIEPIVVRKQGKK-YQIVA 75
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR++AAK+ + + I + E+A+ EN +RK LNP E + L E
Sbjct: 76 GERRYQAAKVLKWNTITAIETSASEDRCFEMALAENEKRKSLNPWEVGRAIQFLRKEKRK 135
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL--GHARTLVSTSDPLSLAQV 211
T ++ ++G + +V + I +L + + + + L+ + +
Sbjct: 136 TAEEVSKVLGFTERYVKQLSSIARLDQKSVQDLIRSGKDPSVKNLEALLKQKEGRGGEMI 195
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
K + + T +LV ++EK K ++K
Sbjct: 196 SSRKSVPTKMTIQLVGLTLQQREKFLKELSSLKKK 230
>gi|326572077|gb|EGE22078.1| parB-like partition protein [Moraxella catarrhalis BC7]
Length = 314
Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+ I+I I PNP PR F+++ L++L +I +G++Q I Y+I+AGER
Sbjct: 35 SRLESIAISDIRPNPVQPRTEFDAKALQELADNIDKNGLLQ-PITVRQTAQGYEIVAGER 93
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRA ++ + + I+ +V ++ + +A+ EN+ RKDL+ E AL E++ +
Sbjct: 94 RFRATQLLGKTSIECIVVHVTDQQNALLALSENLARKDLSDYETALAVEKIQDGFDNKTE 153
>gi|298481984|ref|ZP_07000173.1| partitioning protein [Bacteroides sp. D22]
gi|295087341|emb|CBK68864.1| ParB-like partition proteins [Bacteroides xylanisolvens XB1A]
gi|298271848|gb|EFI13420.1| partitioning protein [Bacteroides sp. D22]
Length = 644
Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
++ + I +I P+ N R F L++L +SI+ GI+Q + VR G Y+II
Sbjct: 74 ATATAETDLDITTIHPSTDNHRKTFNDASLQELAESIREVGILQAIAVRPRTEGGYEIIY 133
Query: 94 GERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
GERR+RA+ +A + I N + + ++++ EN+QR+ + P EEA +++L+ +
Sbjct: 134 GERRYRASLLAGAKTIKATIYNNVTDDEAEDMSLSENLQREQVRPTEEAKAFKRLLEKGR 193
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI 212
Y + + G+S ++ L++ +L + + E++ E I++ A + + +
Sbjct: 194 YDMYSLTARFGRSEKYIYTRLKLNELYAPIGELLDNETITVSVAEEISTYEPDIQKDVYE 253
Query: 213 VSKKMSVRD 221
K +
Sbjct: 254 KHLKEGNGE 262
>gi|296100172|ref|YP_003617089.1| partitioning protein [Pseudomonas putida]
gi|295443538|dbj|BAJ06417.1| partitioning protein [Pseudomonas putida]
Length = 338
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 14/250 (5%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
S E + + + SI +P PR F +EDL SI S G+++PL VR I
Sbjct: 65 SDESLAASDSGVLAEVKVESIRVSPFQPRLTFSEAAIEDLANSIASVGLVKPLTVRPIGE 124
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G Y++I GERR+RA K+ V +R+V + + +A+ +N ++ L E Y
Sbjct: 125 GAYELIGGERRWRAHKLLGRETVTAYVRSVTDAMAKILALTDNEGQEALTEYERGRSYAA 184
Query: 147 LISE-YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE--EISLGHARTLVSTS 203
++ + + VG + S V+ L ++ LP VR ++ I A+ + S
Sbjct: 185 IMRAGEESSIRALARRVGVNHSIVSRCLLLMDLPEEVRAILDTNPGLIGGKWAKDFIEFS 244
Query: 204 DPLSLAQVIVSKKMSVRD--TEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
+ M E ++ + R + S+ +K ++ +
Sbjct: 245 RTEPALLLQAVTSMRDHQWTQEHALRWLAKEVASRDQQKTPSKFTDKEISGIG------- 297
Query: 262 GLNISIKHRN 271
+ + +
Sbjct: 298 --KVRVDGKK 305
>gi|149195440|ref|ZP_01872522.1| ParB-like nuclease domain [Caminibacter mediatlanticus TB-2]
gi|149134408|gb|EDM22902.1| ParB-like nuclease domain [Caminibacter mediatlanticus TB-2]
Length = 280
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 17/285 (5%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ + K+ E I I + NP+ PR + + +++L +SI+ +G++QP+ V
Sbjct: 5 KKVLKEKVKQKAIGGEEVKEIEIDKLKENPYQPRIEIKEDEVKELAKSIEKNGLLQPINV 64
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEE 140
Y II+G RR A K+ + + I +N D+ +IVEN+QRKDL+ +E
Sbjct: 65 YQSPLSDYYIISGHRRVEAHKLLNKKTIKAIVYKNQDDLKLASKSIVENLQRKDLSLVEL 124
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
AL ++ E+ T ++ +GKS+ +V+ IL IL LP V + I++ + + +
Sbjct: 125 ALSLKRYKEEFKKTLEEVAEDIGKSKGYVSQILSILNLPEKVIKDIKENKTTKDVW--AL 182
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
S + + ++ + E+ + K + + + K + + ++
Sbjct: 183 SLLNSFAKKNKKKFDMSNLDEWEDEIFRIYKGFLKNGREWLKNEINNKSIQNKKE----- 237
Query: 261 VGLNISIKHRNNKGQFCIKYE----TNEQLKIICS--LLGENDFE 299
NI I+ NK I + +LK I LL + E
Sbjct: 238 ---NIEIQSSKNKITIKINLKMERNEISELKKIIENFLLKKPKEE 279
>gi|207722624|ref|YP_002253060.1| partitioning protein [Ralstonia solanacearum MolK2]
gi|206587806|emb|CAQ18388.1| partitioning protein [Ralstonia solanacearum MolK2]
Length = 334
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/289 (18%), Positives = 103/289 (35%), Gaps = 16/289 (5%)
Query: 17 LIGEVNQSIDSPEKKTETIPES-QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
L+G+ + S E + E I + + NP N R ++ + +++ SI +HG
Sbjct: 43 LLGQPARPAFSAESQAAVTSERRVVRIPLDRLQENPLNARRIYDPQVVQERAASIATHGQ 102
Query: 76 IQPLIVRAID--NGLYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
P + + G Y +I G R RA A I + + ++ V N QR
Sbjct: 103 QTPGLAASDPARPGWYVLIDGHYRKRALAAAGKAEMECFIEDGLSDIDFYRLSFVLNEQR 162
Query: 133 KDLNPLEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI--RKE 189
+ L+ A+ + + L + DI I G S V L +LKLP SV +++ R
Sbjct: 163 SGQSALDNAIAWRQLLDDGKVKKEEDICEITGVSAGTVNKTLALLKLPESVLDVMKERPT 222
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
I + L + + + + +K ++ +E +
Sbjct: 223 GIGIATGYELTLYFKSAGEDKTRELVHRVLEEGLSSRDVEQIRKVAQEGRTRKVKEVSRQ 282
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQ---LKIICSLLGE 295
+ +G IK + G+ + + + + + L
Sbjct: 283 YK-IRNDRGDLLGT---IKEW-DSGRVMLDVK-LDDRAARESLVEALKS 325
>gi|330990114|ref|ZP_08314094.1| putative chromosome-partitioning protein parB [Gluconacetobacter
sp. SXCC-1]
gi|329762802|gb|EGG79266.1| putative chromosome-partitioning protein parB [Gluconacetobacter
sp. SXCC-1]
Length = 625
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 4/196 (2%)
Query: 19 GEVNQSIDSPEKKTETIPE---SQDCISIHSIVPNPHNPRNYFES-EGLEDLCQSIKSHG 74
G+ ++ + + I ++ NP NPR E L +I++ G
Sbjct: 3 GDAPPDRPEDVERRHSAKDRTMELREIDPKTLRANPDNPRRAAPPVEEDRRLALNIRAVG 62
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
+I P +VR +G+ IIAG RR R + MA L +PV + D + +A EN+ R
Sbjct: 63 LIHPPLVREGGDGVLTIIAGHRRARCSIMAKLKTIPVFVTGADEELDGLVAASENMIRLG 122
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
++ ++ ++ SE + I + + +++ + + L + + I
Sbjct: 123 MSEPDQWRAVSRMRSEQKMKETAICKALMVTPAYLRRLDLLAHLHPPILDAIELGIGPDD 182
Query: 195 HARTLVSTSDPLSLAQ 210
AR ++ + P A+
Sbjct: 183 DARKAIAKASPDEQAR 198
>gi|167763556|ref|ZP_02435683.1| hypothetical protein BACSTE_01931 [Bacteroides stercoris ATCC
43183]
gi|167698850|gb|EDS15429.1| hypothetical protein BACSTE_01931 [Bacteroides stercoris ATCC
43183]
Length = 644
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 1/204 (0%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ K ++ + I ++ P+ N R F L++L +SI+ GI+Q +
Sbjct: 60 TEEAPQQATFKTPLATATAETDLDITTVHPSRDNHRKTFNDASLQELAESIREVGILQAI 119
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPL 138
VR G Y+II GERR+RA+ +A + I N + + ++++ EN+QR+ + P
Sbjct: 120 AVRPRTEGGYEIIYGERRYRASLLAGAKTIKATIYNNVTDDEAEDMSLSENLQREQVRPT 179
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA +++L+ + Y + + G+S ++ L++ +L + + E++ E I++ A
Sbjct: 180 EEAKAFKRLLEKGRYDMYSLTARFGRSEKYIYTRLKLNELYAPIGELLDNETITVSVAEE 239
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDT 222
+ + + K +
Sbjct: 240 ISTYEPDIQKDVYEKHLKEGNGEG 263
>gi|296051628|ref|YP_003632302.1| parB-like partition protein [Planctomyces limnophilus DSM 3776]
gi|296016865|gb|ADG70103.1| parB-like partition protein [Planctomyces limnophilus DSM 3776]
Length = 624
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
EV I + I + + P+P R SE + +L QS+ G + P
Sbjct: 89 PEVTSESSQEHPGKAFIVDRSRDIPLSQLDPSPWQVRKKTSSEWIAELGQSLLDDGQLAP 148
Query: 79 LIVRAIDN-------GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
L+VR Y+IIAG R AA L + I D++++ + +++N +
Sbjct: 149 LLVRLSKIINQGSLANRYEIIAGHTRAFAAGQVGLKSLRCDILECDDETAQRLVLIDNAK 208
Query: 132 RKDLNPLEEALGYEQLISEYG---YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
RKDL +E+A + L+ Y +Q + + +G S+ ++N+ R+L LP V+E++
Sbjct: 209 RKDLTKIEQAQALKALVETYEAAGKSQRQLAADIGISQGQISNLTRLLLLPPEVQELVIS 268
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTE 223
EI+ AR V +A+ V++ +RD
Sbjct: 269 GEITQASAREAVPMLQHPKIAKAFVAEIADIRDVA 303
>gi|331083383|ref|ZP_08332495.1| hypothetical protein HMPREF0992_01419 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404076|gb|EGG83624.1| hypothetical protein HMPREF0992_01419 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 299
Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 98/241 (40%), Gaps = 8/241 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I+ I +P + E + DL +S+K++G++ P
Sbjct: 6 GEKIKLTSIDELLGVVNEESAMEIEINRIHAFKDHPFKVLDDEKMADLVESVKTYGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R+ Y++I+G RR AA +A L+ +P I+R + + ++ + N+QR++L P
Sbjct: 66 VLLRSDGENGYEMISGHRRMHAAVIAGLATIPAIVRELSDDDAVIAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
E+A Y + + ++ + + I E + + ++
Sbjct: 126 EKAFAYRMKLEAMKRQGVRNDLTLCQNGTKYRTDVVI-------AEQVGESARNVQRYIR 178
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
L L ++ + ++ K I + K K +T L K++
Sbjct: 179 LTELIPELLDMVDAKKLNFTIAVDISYIDKEMQKWIYEY-IRDTGFIKPKQITALRKQLE 237
Query: 259 S 259
Sbjct: 238 E 238
>gi|325264184|ref|ZP_08130916.1| hypothetical protein HMPREF0240_03189 [Clostridium sp. D5]
gi|324030668|gb|EGB91951.1| hypothetical protein HMPREF0240_03189 [Clostridium sp. D5]
Length = 305
Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 72/141 (51%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V++ + E + E E IS+ I P++P + + DL SIK +G++
Sbjct: 3 LPSVDELFTTQENREEQSLEKVMNISVDLIDDFPNHPFKVLDDSEMIDLSTSIKEYGVLV 62
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P +VR ++G Y+++AG RR + +A E+P I+R++ + ++ I + N+QR+ + P
Sbjct: 63 PALVRPKEDGRYEMVAGHRRKHGSILAEKKEIPCIVRSLTDDEAILIMVDSNLQREHILP 122
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E+A Y+ +
Sbjct: 123 SEKAFAYKMKLDAMKRQGKRT 143
>gi|319644568|ref|ZP_07998919.1| hypothetical protein HMPREF9011_04522 [Bacteroides sp. 3_1_40A]
gi|317384048|gb|EFV65036.1| hypothetical protein HMPREF9011_04522 [Bacteroides sp. 3_1_40A]
Length = 606
Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ K ++ + I ++ P+ N R F L++L +SI+ GI+Q +
Sbjct: 48 TEEAPQQATFKTPLATATAETDLDITTVHPSRDNHRKTFNDASLQELAESIREVGILQAI 107
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPL 138
VR G Y+II GERR+RA+ +A + I N + + ++++ EN+QR+ + P
Sbjct: 108 AVRPRTEGGYEIIYGERRYRASLLAGAKTIKATIYNNVTDDEAEDMSLSENLQREQVRPT 167
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA +++L+ + Y + + G+S ++ L++ +L + + E++ E I++ A
Sbjct: 168 EEAKAFKRLLEKGRYDMYSLTARFGRSEKYIYTRLKLNELYAPIGELLDNETITVSVAEE 227
Query: 199 LVSTSDPLSLAQVIVSKKMSVRD 221
+ + + K +
Sbjct: 228 ISTYEPDIQKDVYEKHLKEGNGE 250
>gi|27228557|ref|NP_758607.1| partitioning protein [Pseudomonas resinovorans]
gi|219856978|ref|YP_002474010.1| partitioning protein [Pseudomonas sp. CA10]
gi|26106145|dbj|BAC41585.1| partitioning protein [Pseudomonas resinovorans]
gi|219688906|dbj|BAH09997.1| partitioning protein [Pseudomonas putida]
Length = 342
Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 107/281 (38%), Gaps = 15/281 (5%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ +T IS +I +P PR F +EDL SI S G+ +P+
Sbjct: 62 NSQAKVSGKVLETGAANGVIAEISTSNIRVSPFQPRLAFSEAAIEDLANSIASVGLAKPV 121
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
VR I +G+Y+++ GERR+RA K+ + +R +D+ + +A+ +N ++ L E
Sbjct: 122 TVRPIGDGIYELVGGERRWRAHKLLGRETITSYVREMDDALAQILALTDNEGQEALTEYE 181
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
Y +++ G + + +L + + I L +
Sbjct: 182 RGKSYAKILDSGGEPSVRALGRRLGVNHSIVSRCLLLMDLPNEVKAILDTNPGLIGGKRA 241
Query: 200 VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS 259
+ S ++ + ++ E+ QE + ++ + TD E S
Sbjct: 242 KDFIEFSSKEPELLLRAVTAMRDEQWTQEHALRWLAKEIASRTQQNSSSKFTDTE---IS 298
Query: 260 KVGLNISIKHRNNKGQFCIKY-ETNE------QLKIICSLL 293
+G + ++ + + ++ ++ + Q + +
Sbjct: 299 GIG-RVRVEGK----KVELRCEKSVDAKLIAEQFEAFLKTI 334
>gi|299145266|ref|ZP_07038334.1| putative partitioning protein [Bacteroides sp. 3_1_23]
gi|298515757|gb|EFI39638.1| putative partitioning protein [Bacteroides sp. 3_1_23]
Length = 633
Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 8/213 (3%)
Query: 17 LIGEVNQSIDSPEKKTET-------IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQS 69
LIG N + E ++ + I ++ P+ N R F L++L S
Sbjct: 37 LIGGPNVPAATEEAPQPAEFKTPLATATAETDLDITTVQPSAENHRKTFNDASLQELADS 96
Query: 70 IKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR-NVDNKSSLEIAIVE 128
I+ G++Q + VR G Y+II GERR+RA+ +A + I N+ + + ++++ E
Sbjct: 97 IREVGVLQAIAVRPRTAGGYEIIYGERRYRASLLAGAKTIKATIYGNITDDEAEDMSLSE 156
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
N+QR+ + P EEA +++L+ + Y + S G+S ++ L++ +L + E++
Sbjct: 157 NLQREQVRPTEEARAFKRLLEKGRYDMYSLVSRFGRSEKYIYTRLKLNELYQPIGELLDN 216
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKKMSVRD 221
E I++ A + + + K D
Sbjct: 217 ETITISVAEEISTYEPHIQKDVYEKHLKEGSGD 249
>gi|229106072|ref|ZP_04236686.1| Stage 0 sporulation protein J [Bacillus cereus Rock3-28]
gi|228677347|gb|EEL31610.1| Stage 0 sporulation protein J [Bacillus cereus Rock3-28]
Length = 88
Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIK 268
+ I + ++VR E++VQE + + K + +E+ + + E + K G ++ IK
Sbjct: 1 MKRIEKEGLNVRQLEKIVQEINQHVSRETKQVK--KERNIFFVERETFLREKFGTDVKIK 58
Query: 269 H-RNNKGQFCIKYETNEQLKIICSLLGEND 297
+ KG+ I++ E L I LL +
Sbjct: 59 ETKKEKGKIEIEFFNKEDLNRILELLSHKN 88
>gi|295798182|emb|CAZ15824.1| probable parb-like (korb) partition protein [Xanthomonas
albilineans]
Length = 355
Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 5 YSKRRLG-RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL 63
+K+ L GL L S+ + + + I+ +P+ PR F L
Sbjct: 1 MAKKGLDLTGLDDL------SVLANAHGGSGANAASKIAPLAEIIADPNQPRKRFNQRKL 54
Query: 64 EDLCQSIKSHGIIQPLIVRA-IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD---NK 119
E+L SIK G+ Q +IVR D+G + I+ GERR+RA+ +A ++P+ IR+
Sbjct: 55 EELRDSIKESGVQQAIIVRPKNDDGKHIIVFGERRYRASLLAGKKDIPIEIRDTTVLPES 114
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
I ++EN+QR DL+PLE A ++ + +
Sbjct: 115 EVRFIQLIENIQRDDLDPLEIADAIKEQLDQGMKKAQIAAK 155
>gi|111116394|ref|YP_709278.1| putative partitioning protein [Pseudomonas putida]
gi|6273613|emb|CAB60149.1| ParB protein [Pseudomonas fluorescens]
gi|111036198|dbj|BAF02388.1| putative partitioning protein [Pseudomonas putida]
Length = 338
Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 14/250 (5%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
S E + + + SI +P PR F +EDL SI S G+++PL VR I
Sbjct: 65 SDESLAASDSGVLAEVRVESIRVSPFQPRLTFSEAAIEDLANSIASVGLVKPLTVRPIGE 124
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G Y++I GERR+RA K+ V +R+V + + +A+ +N ++ L E Y
Sbjct: 125 GAYELIGGERRWRAHKLLGRETVTAYVRSVTDAMAKILALTDNEGQEALTEYERGRSYAA 184
Query: 147 LISE-YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE--EISLGHARTLVSTS 203
++ + + VG + S V+ L ++ LP VR ++ I A+ + S
Sbjct: 185 IMRAGEESSIRALARRVGVNHSIVSRCLLLMDLPEEVRAILDTNPGLIGGKWAKDFIEFS 244
Query: 204 DPLSLAQVIVSKKMSVRD--TEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
+ M E ++ + R + S+ +K ++ +
Sbjct: 245 RTEPALLLQAVTSMRDHQWTQEHALRWLAKEVASRDQQKTPSKFTDKEISGIG------- 297
Query: 262 GLNISIKHRN 271
+ + +
Sbjct: 298 --KVRVDGKK 305
>gi|295101817|emb|CBK99362.1| ParB-like partition proteins [Faecalibacterium prausnitzii L2-6]
Length = 344
Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 70/135 (51%)
Query: 13 GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
GL + + + E + E E I I + P +P + E ++ +SIK
Sbjct: 5 GLNVSLNSYDDIFSTEETRQEEQREQVQQIPIDELYPFKDHPFKVLDDEAMQRTVESIKQ 64
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G+ PLI R +G Y+II+G RR AA++A L +PVI+R++ + +++ + + N+QR
Sbjct: 65 LGVTNPLIARPRPDGGYEIISGHRRQHAAQLARLKTLPVIVRDMSDDAAVLLMVDSNLQR 124
Query: 133 KDLNPLEEALGYEQL 147
+ + P E A Y+
Sbjct: 125 EQILPSERAFAYKMK 139
>gi|308205776|gb|ADO19209.1| ParB family protein [Nostoc flagelliforme str. Sunitezuoqi]
Length = 104
Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 5 YSKRRLGR--GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG 62
S+R L R GL L G E+ + I I+ PR YF+
Sbjct: 1 MSERTLDRLSGLDGLFG-----------NDESATTQASMLPISQIILPKSQPRRYFDQNK 49
Query: 63 LEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
LE L SIK G+++P++VR I Y+++AGERR +A ++A L + +
Sbjct: 50 LESLANSIKEVGLLEPIVVRCIRENTYELVAGERRLKACQIAELEKCSCKYHRM 103
>gi|38638552|ref|NP_943138.1| hypothetical protein ND005 [Pseudomonas sp. ND6]
gi|34335340|gb|AAP44238.1| ParB [Pseudomonas sp. ND6]
Length = 338
Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 14/250 (5%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ E + + + SI +P PR F +EDL SI S G+++PL VR I
Sbjct: 65 NDESLAASDSGVLAEVKVESIRVSPFQPRLTFSEAAIEDLANSIASVGLVKPLTVRPIGE 124
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G Y++I GERR+RA K+ V +R+V + + +A+ +N ++ L E Y
Sbjct: 125 GAYELIGGERRWRAHKLLGRETVTAYVRSVTDAMAKILALTDNEGQEALTEYERGRSYAA 184
Query: 147 LISE-YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE--EISLGHARTLVSTS 203
++ + + VG + S V+ L ++ LP VR ++ I A+ + S
Sbjct: 185 IMRAGEESSIRALARRVGVNHSIVSRCLLLMDLPEEVRAILDTNPGLIGGKWAKDFIEFS 244
Query: 204 DPLSLAQVIVSKKMSVRD--TEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV 261
+ M E ++ + R + S+ +K ++ +
Sbjct: 245 RTEPALLLQAVTSMRDHQWTQEHALRWLAKEVASRDQQKTPSKFTDKEISGIG------- 297
Query: 262 GLNISIKHRN 271
+ + +
Sbjct: 298 --KVRVDGKK 305
>gi|167643938|ref|YP_001672036.1| KorB [Collimonas fungivorans]
gi|166863230|gb|ABZ01486.1| KorB [Collimonas fungivorans Ter331]
Length = 381
Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 5/124 (4%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+AL + I + I +P PR F E ++++ S+++
Sbjct: 5 LSAL---EEKPTAPAVAGAAQPTGKPLDIPLADIEEDPDQPRKEFTPEAMQEMTDSVRAR 61
Query: 74 GIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+ P+ VR + + + G RR+R + A + +P + + I ++
Sbjct: 62 GVKTPVSVRTHPSKPGKWMLNFGARRYRGSLAAGRATIPAFVDEAHDDYDQVIENIQRDD 121
Query: 132 RKDL 135
K +
Sbjct: 122 LKPM 125
>gi|291540722|emb|CBL13833.1| ParB-like partition proteins [Roseburia intestinalis XB6B4]
Length = 299
Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K ++ +++ + P ++P + E +++ +S+ HG+IQP IVR +G Y
Sbjct: 20 TKDNSVEGIYTTVALSQLHPFKNHPFKVLDDEKMQETVESVIQHGVIQPGIVRPCADG-Y 78
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+++AG RR+RA ++A ++PVIIR++D+ ++ + + N+QR++L P E+A Y+
Sbjct: 79 EVVAGHRRWRACELAGKPDMPVIIRDLDDDAATVLMVDTNIQRENLLPSEKARAYKMKYE 138
Query: 150 EYGYT 154
+
Sbjct: 139 ALKHQ 143
>gi|300696569|ref|YP_003747230.1| plasmid partition protein [Ralstonia solanacearum CFBP2957]
gi|299073293|emb|CBJ52802.1| plasmid partition protein [Ralstonia solanacearum CFBP2957]
Length = 335
Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/295 (18%), Positives = 102/295 (34%), Gaps = 20/295 (6%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPES--QDCISIHSIVPNPHNPRNYFESEGLEDLCQS 69
RGL +G+ + P I + + NP N R ++ + +++ S
Sbjct: 41 RGL---LGQPAPRPAFSAESQTVAPSERRVVKIPLDRLQENPLNARRIYDPQIVQERAAS 97
Query: 70 IKSHGIIQPLIVRAID--NGLYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAI 126
I +HG P + + G Y +I G R RA A I + + ++
Sbjct: 98 IATHGQQTPGLAASDPARPGWYVLIDGHYRKRALAAAGKAEMECFIEDGLSDIDFYRLSF 157
Query: 127 VENVQRKDLNPLEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
V N QR + L+ A+ + + L + DI I G S V L +LKLP SV ++
Sbjct: 158 VLNEQRSGQSALDNAIAWRQLLDDGKVKKEEDICEITGVSAGTVNKTLALLKLPESVLDV 217
Query: 186 I--RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ R I + L + + D + +K ++
Sbjct: 218 MKERPTGIGIATGYELTLYFKSAGEDKTRELVHRVLEDGLSSRDVEQIRKVAQEGRTRKV 277
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQ---LKIICSLLGE 295
+E + + +G IK + G+ + + + + + L
Sbjct: 278 KEVSRQYK-IRNDRGDLLGT---IKEW-DSGRVMLDVK-LDDRAARESLVEALKS 326
>gi|295102005|emb|CBK99550.1| ParB-like partition proteins [Faecalibacterium prausnitzii L2-6]
Length = 310
Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Query: 12 RG-LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
+G L + + + E + E E I I + P ++P + E ++ +S+
Sbjct: 3 KGSLNVSLKGADDIFSTEESRQEQQREQVQQIPIGELFPFKNHPFKVLDDESMQRTVESV 62
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+ +G++ PLI R G Y+II+G RR AA++A L +PVI+R +D+ +++ + + N+
Sbjct: 63 EQYGVLSPLIARPRPEGGYEIISGHRRQHAAQLAGLDALPVIVRQMDDDAAVLLMVDSNL 122
Query: 131 QRKDLNPLEEALGYEQL 147
QR+++ P E A Y+
Sbjct: 123 QRENILPSERAFAYKMK 139
>gi|317132818|ref|YP_004092132.1| parB-like partition protein [Ethanoligenens harbinense YUAN-3]
gi|315470797|gb|ADU27401.1| parB-like partition protein [Ethanoligenens harbinense YUAN-3]
Length = 309
Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 73/130 (56%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E + + E + + + P P +P + + +++ +SIK +G++
Sbjct: 10 LNSYDDIFSTEETREDAKREKVTDMPLSELHPFPDHPFQVRDDDSMKETVESIKEYGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P IVR+ +G Y++I+G RR A ++A L +PVI+R++D+ ++ I + N+QR+++ P
Sbjct: 70 PAIVRSRADGGYELISGHRRKHACELAGLPTMPVIVRDLDDDAATIIMVDSNIQRENILP 129
Query: 138 LEEALGYEQL 147
E A Y+
Sbjct: 130 SERAKAYKMK 139
>gi|15807674|ref|NP_285326.1| ParB family chromosome partitioning protein [Deinococcus
radiodurans R1]
gi|12230476|sp|Q9RZE7|PARB2_DEIRA RecName: Full=Probable chromosome 2-partitioning protein parB;
AltName: Full=Probable chromosome II-partitioning
protein parB
gi|6460594|gb|AAF12300.1|AE001862_126 chromosome partitioning protein, ParB family [Deinococcus
radiodurans R1]
Length = 293
Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 80/128 (62%), Gaps = 9/128 (7%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L+GE + + ++ + PR F+ E L +L +SI++HG++
Sbjct: 15 LLGETPVDLSQAND--------IRALPVNELKVGSTQPRRSFDLERLSELAESIRAHGVL 66
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
QPL+VR++D G Y+I+AGERR+RAA++A L+EVPV++R + N+ + A++EN+QR +LN
Sbjct: 67 QPLLVRSVD-GQYEIVAGERRWRAAQLAGLAEVPVVVRQLSNEQARAAALIENLQRDNLN 125
Query: 137 PLEEALGY 144
++E G
Sbjct: 126 VIDEVDGK 133
>gi|148264081|ref|YP_001230787.1| parB-like partition protein [Geobacter uraniireducens Rf4]
gi|146397581|gb|ABQ26214.1| parB-like partition protein [Geobacter uraniireducens Rf4]
Length = 286
Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 118/277 (42%), Gaps = 19/277 (6%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + + + ++ + PR Y E LE+LC SI+ HG++QP+I
Sbjct: 22 TAEEASPVKNTKVGKQRKNSELDVEALQISDSQPRRYINEERLEELCLSIRKHGVLQPVI 81
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
V+ +G ++AG+RR AA+ A L ++PV + EIA++EN+QR DL +EE
Sbjct: 82 VQVDTDGSNLLVAGQRRLLAARKAGLKKIPV---VFTDGDPAEIALIENLQRSDLTAIEE 138
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A L GYT +D+ +I+GKS++ V+ + + KLP +++E R++ +
Sbjct: 139 AEAISSLKERNGYTLDDVSAIMGKSKTTVSETISLTKLPETIKEECRRDPHMAKSILVEI 198
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
+ + + +++ + KK S K
Sbjct: 199 ARQPTADEMITAYNGYKKEKLPRAQLRKINRPGASGKKRIGVSFVKSFA--------QRI 250
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQL-----KIICSL 292
V +++ I + Q E+L +I L
Sbjct: 251 VTVDVEILKSKQREQMK---NNLEELHAKIGDLIVKL 284
>gi|295100933|emb|CBK98478.1| ParB-like partition proteins [Faecalibacterium prausnitzii L2-6]
Length = 311
Score = 57.4 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 73/141 (51%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L + + + E + E E I I + P ++P + E ++ +S++ +
Sbjct: 6 LNVSLKGADDIFSTEESRQEQQREQVQQIPIGELFPFKNHPFKVLDDESMQRTVESVEQY 65
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++ PLI R G Y+II+G RR AA++A L +PVI+R +D+ +++ + + N+QR+
Sbjct: 66 GVLSPLIARPRPEGGYEIISGHRRQHAAQLAGLDALPVIVRQMDDDAAVLLMVDSNLQRE 125
Query: 134 DLNPLEEALGYEQLISEYGYT 154
+ P E A Y+ + +
Sbjct: 126 TILPSERAFAYKMKLEAMKHQ 146
>gi|253700078|ref|YP_003021267.1| parB-like partition protein [Geobacter sp. M21]
gi|251774928|gb|ACT17509.1| parB-like partition protein [Geobacter sp. M21]
Length = 260
Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ DS E I++ + + PR +F+ + L +SI G++ P++ R
Sbjct: 2 TADSKETTKTYRKGKVHDINLDLLHRDIDQPRKHFDEAEHDALKKSIADKGLLYPVLFRV 61
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
DN +++GERR +A L + + VD+ EIA+++N+QR +L+P++E+
Sbjct: 62 DDNDNLILVSGERRLKAC--RDLGKETIPAMRVDSDRYDEIALIDNIQRVELSPIDESEA 119
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
L ++YG+TQ +G++VGK+++ +A+IL ++KL VRE R A
Sbjct: 120 ISNLQTKYGHTQEQLGNLVGKAQNTIADILCLMKLSGEVREDARHRPELSRSA 172
>gi|218296999|ref|ZP_03497685.1| parB-like partition protein [Thermus aquaticus Y51MC23]
gi|218242702|gb|EED09238.1| parB-like partition protein [Thermus aquaticus Y51MC23]
Length = 294
Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 16/254 (6%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ EV + K+ + + + ++VP+P PR F E LE L +SI+ G++Q
Sbjct: 4 LDEVLGTALLKGKRAQGAGREVVTVPLEALVPSP-QPRRRF--ENLEALAESIREKGVLQ 60
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PL+VR + +G Y I+AGERR+RAAKMA L+EVPV + ++ K + +A+VEN+QR+DLNP
Sbjct: 61 PLLVRPLGDGRYAIVAGERRYRAAKMAGLAEVPVRVLDLSEKEARLLALVENLQREDLNP 120
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
EE LG +L ++ + + +R K + ++ E
Sbjct: 121 YEETLGVLEL-------LSEELGKTREEVVGLLRRMRKEKRGEAGHNVMASPEAQRVEEV 173
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK-- 255
+ + + E+ + ++ E LE+
Sbjct: 174 FKALGRMTWESFVQNRLPLLGLPEDLRAALEEGALPYTAALELKKVKDLEARARLLEEAK 233
Query: 256 ---KISSKVGLNIS 266
+ + +
Sbjct: 234 GGLSLRE-LKAKVR 246
>gi|307591628|ref|YP_003900427.1| parB-like partition protein [Cyanothece sp. PCC 7822]
gi|306986482|gb|ADN18361.1| parB-like partition protein [Cyanothece sp. PCC 7822]
Length = 388
Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 94/261 (36%), Gaps = 12/261 (4%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
RGL + E ++ +P+ I + I NP R F E + L S+
Sbjct: 41 RGLE---DKKAFENKVVELRSSLLPQGIQKIPLSQIEFNPSQSRQTFSQESIRLLACSLL 97
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS-------LEI 124
HG QP++V Y + GERR RAA+ + + II
Sbjct: 98 EHGQQQPILVFQKSFNSYLLFEGERRCRAARSIDWATIDGIIIPKKESVCLEKPETLRRY 157
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK--LPSSV 182
+I+ N R++LNPL+ A + ISE + + +++ +
Sbjct: 158 SILINHHRENLNPLDLAEALIKDISETYGIDAQEIPRLLNALMARLTRKKLVDELTNLTF 217
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
+ ++EE + +A+ ++S +++ + V E K
Sbjct: 218 LDKEQQEEKLKQLEAQDIIKESEGIIARFLLSLQLNPASIKANVFPALKFHEDLKIAIRT 277
Query: 243 SREKEKYLTDLEKKISSKVGL 263
+ L++ + K+GL
Sbjct: 278 QGLGGHHAKVLQQISAEKLGL 298
>gi|299068441|emb|CBJ39664.1| plasmid partition protein [Ralstonia solanacearum CMR15]
Length = 334
Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 60/294 (20%), Positives = 106/294 (36%), Gaps = 19/294 (6%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPES-QDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
RGL +G+ + S E ET E IS+ + NP N R ++ + +++ SI
Sbjct: 41 RGL---LGQPARPAFSAESPAETSSERRVVKISLERLQENPLNARRIYDQQIVQERAASI 97
Query: 71 KSHGIIQPLIVRAID--NGLYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAIV 127
+HG P + G Y +I G R RA A I + + ++ V
Sbjct: 98 ATHGQQTPGLAAPDPAKPGWYVLIDGHYRKRALAAAGKAEMECFIEDGLSDIDFYRLSFV 157
Query: 128 ENVQRKDLNPLEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
N QR + L+ A+ + + L + DI I G S V L +LKLP SV E++
Sbjct: 158 LNEQRSGQSALDNAIAWRQLLDDGKVKKEEDICEITGVSAGTVNKTLALLKLPESVLEVM 217
Query: 187 --RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
R I + L + + + + +K ++ +
Sbjct: 218 KERPTGIGIATGYELTLYFKSAGEDKTRDLVHRVLEEGLSSRDVEQIRKVAQEGRTRKVK 277
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQ---LKIICSLLGE 295
E + + +G IK + G+ + + + + + L
Sbjct: 278 EVSRQYK-IRNDRGDLLGT---IKEW-DSGRVMLDVK-LDDRAARESLVEALKS 325
>gi|325914680|ref|ZP_08177021.1| ParB-like partition protein [Xanthomonas vesicatoria ATCC 35937]
gi|325539182|gb|EGD10837.1| ParB-like partition protein [Xanthomonas vesicatoria ATCC 35937]
Length = 586
Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Query: 42 ISIHSIV-PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ + ++ + HNPR F E + LCQ+++ G++ P+ VR + ++IIAGERR+RA
Sbjct: 14 LPVSTVRVRSGHNPRRRFNQEEHDGLCQTLREEGLLHPIAVRKLGGEEFEIIAGERRWRA 73
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
AK + + + + + +A +EN++R +L+ EEA + + +
Sbjct: 74 AKDIGWASIDAKVFICSEQQARRMARIENLKRVNLSVPEEAYLAQDQLDDCEGDYEQTAR 133
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
++G + + + + +++L +V + + I +GHA L +
Sbjct: 134 VLGWTVAKLRHRMQLLHASKAVMDALMDRAIQVGHAELLSTLPTEKQ 180
>gi|295103412|emb|CBL00956.1| ParB-like partition proteins [Faecalibacterium prausnitzii SL3/3]
Length = 308
Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Query: 12 RG-LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
+G L + + + E + E E I I + P ++P + E ++ +S+
Sbjct: 3 KGSLNVSLKGADDIFSTEESRQEQQREQVQQIPIGELFPFKNHPFKVLDDESMQRTVESV 62
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+ G++ PLI R G Y+II+G RR AA++A L +PVI+RN+D+ +++ + + N+
Sbjct: 63 EQCGVLSPLIARPRPEGGYEIISGHRRQHAAQLAGLDTLPVIVRNMDDDAAVLLMVDSNL 122
Query: 131 QRKDLNPLEEALGYEQL 147
QR+++ P E A Y+
Sbjct: 123 QRENILPSERAFAYKMK 139
>gi|299140224|ref|ZP_07033390.1| parB-like partition protein [Acidobacterium sp. MP5ACTX8]
gi|298597763|gb|EFI53935.1| parB-like partition protein [Acidobacterium sp. MP5ACTX8]
Length = 532
Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
T + + I + +P NPR F+ L++L SI S G++ L+VR N Y+
Sbjct: 2 NTAIVNNVPRELPIAILSESPTNPRRVFDEAFLKELASSIDSQGVLASLLVRP-KNQRYE 60
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ--LI 148
I+ G +RFRAA++A VPV IR + + +E +VEN+QR+D++PLEEA ++ +
Sbjct: 61 IVFGAQRFRAAQIAGKESVPVEIREMTDAQVMEAQLVENLQRRDVHPLEEANSFKGLLDL 120
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
E+ Y+ I + +GK ++VA L++ +L V + +EEI LGHA L
Sbjct: 121 EEHKYSIEQIAAKIGKPPAYVAMRLKLTELAEVVIDEFYREEIGLGHALLLAKLPLDKQE 180
Query: 209 AQVIVSKKMS 218
+ +
Sbjct: 181 GALKACFRED 190
>gi|56130629|ref|YP_145532.1| partitioning protein [Ralstonia metallidurans CH34]
gi|56068620|emb|CAI11184.1| partitioning protein [Cupriavidus metallidurans CH34]
Length = 263
Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 68/133 (51%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ + I +PH PR F+ + L L +I G+ P+ VR D+G +++IAGERRFRA
Sbjct: 1 MLPMDQIDVSPHQPRLVFDQDALASLTSTIDLVGLNNPITVRRKDDGRFELIAGERRFRA 60
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
++ + +P +R++ K + +A+ +N R+DL+ E ALGY++L+ S
Sbjct: 61 FQLKHEAYIPGFVRDLGEKEAAILAMTDNDAREDLSDFERALGYQRLLKLGHCLNQMDIS 120
Query: 161 IVGKSRSHVANIL 173
+
Sbjct: 121 RCVGRSMATVSRC 133
>gi|160945933|ref|ZP_02093159.1| hypothetical protein FAEPRAM212_03466 [Faecalibacterium prausnitzii
M21/2]
gi|158443664|gb|EDP20669.1| hypothetical protein FAEPRAM212_03466 [Faecalibacterium prausnitzii
M21/2]
Length = 307
Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Query: 12 RG-LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
+G L + + + E + E E I I + P ++P + E ++ +S+
Sbjct: 3 KGSLNVSLKGADDIFSTEESRQEQQREQVQQIPIGELFPFKNHPFKVLDDESMQRTVESV 62
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+ +G++ PLI R G Y+II+G RR AA++A L +PVI+R +D+ +++ + + N+
Sbjct: 63 EQYGVLSPLIARPRPEGGYEIISGHRRQHAAQLAGLDTLPVIVRQMDDDAAVLLMVDSNL 122
Query: 131 QRKDLNPLEEALGYEQL 147
QR+++ P E A Y+
Sbjct: 123 QRENILPSERAFAYKMK 139
>gi|288961942|ref|YP_003452252.1| chromosome partitioning protein [Azospirillum sp. B510]
gi|288914222|dbj|BAI75708.1| chromosome partitioning protein [Azospirillum sp. B510]
Length = 273
Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 96/164 (58%), Gaps = 4/164 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
P + + I+ NP PR +F+ + ++ L SI +G+ QP++V+ G ++++AGE
Sbjct: 18 PPRLLELDVARIIRNPGMPRRHFDPQEMQGLADSIAHYGLKQPILVQET-VGGHRLVAGE 76
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA +M L+ + ++ + + E+ +VENVQR DL+ LE A +LI +GYTQ
Sbjct: 77 RRLRAHEMLGLATIYALVTSGN---PDELTLVENVQRVDLDALELAEALARLIDRFGYTQ 133
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
+G I+GKS+S+V++ LR+ LP ++++ + + +
Sbjct: 134 EQLGRIIGKSQSNVSHTLRLNSLPETIKQEYAAAHHDVSRSTLI 177
>gi|255020378|ref|ZP_05292445.1| ParB-like partition protein [Acidithiobacillus caldus ATCC 51756]
gi|254970178|gb|EET27673.1| ParB-like partition protein [Acidithiobacillus caldus ATCC 51756]
Length = 435
Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 19/173 (10%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF------ESEGLEDLCQSIKSHGI 75
+ +K +T + + + +I P+P PR + GLE+L SI +HGI
Sbjct: 21 DLEAAVAKKPADTPQSAYQFLPLDAIEPDPDQPRRISGMSDGDDPHGLEELAGSILAHGI 80
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-------------NKSSL 122
IQP+ VR++ G Y+I++GERR+RAAK+A + P + D L
Sbjct: 81 IQPITVRSLGGGRYRIVSGERRWRAAKIALQTGEPCRRKGYDLARIPAVLVTPESEHDRL 140
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
E+ +VEN+ R D+ PL+ A ++L+ E + +++ +GKSR+ V IL +
Sbjct: 141 EMQMVENLARADMTPLDTARALQKLLDETKISVSELARRLGKSRTWVLQILNV 193
>gi|224543148|ref|ZP_03683687.1| hypothetical protein CATMIT_02348 [Catenibacterium mitsuokai DSM
15897]
gi|224523935|gb|EEF93040.1| hypothetical protein CATMIT_02348 [Catenibacterium mitsuokai DSM
15897]
Length = 315
Score = 57.0 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 67/143 (46%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + ++ + + E I I I P +P F E +E L SIK +G++
Sbjct: 11 LTAYDDLFETDQSREEAKLSKIRDIPISEIDEFPDHPFKVFIDEDMEQLVDSIKRNGVMT 70
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++I+G RR +A ++A L + ++++ + ++ + + N+QR + P
Sbjct: 71 PATVRLKEDGRYELISGHRRKKACELAGLETLKCEVKDLSREEAIIVMVESNLQRSTILP 130
Query: 138 LEEALGYEQLISEYGYTQNDIGS 160
E+A Y+ +
Sbjct: 131 SEKAFAYKMRLEAMKRQAGRPPK 153
>gi|170079555|ref|YP_001736188.1| ParB family chromosome partitioning protein [Synechococcus sp. PCC
7002]
gi|169887224|gb|ACB00933.1| chromosome partitioning protein, ParB family [Synechococcus sp. PCC
7002]
Length = 299
Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 14/256 (5%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLY 89
E E + ++I +I PR+YF+ E ++ L SIK +GI++PL+VR Y
Sbjct: 11 AELPTEPESSVAIANIRLPESQPRHYFDPEKIQRLAASIKEYGILEPLLVRPIRHQTNRY 70
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+++AGERR+RAAK L VPV+IR++D++ +L IA+VEN+ R+DLNP+EEA G L++
Sbjct: 71 ELVAGERRYRAAKQLGLKTVPVVIRDLDDQQALAIALVENLTREDLNPVEEAEGVLNLLA 130
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
Q + + I + EI + S
Sbjct: 131 IELQLQPQEVKSLLYRLENEKKGKTITHN-------VMGSEIGEQIQSVFTNLGQNWSSF 183
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKH 269
+++ D V Q + K ++ E LE I + L+ I+
Sbjct: 184 TANRLPLLNLPDDILEVLRQGKIAYTKAKAIARLQDAESRKNLLETAIQENLSLS-EIRQ 242
Query: 270 RNNKGQFCIKYETNEQ 285
R N +K+ T EQ
Sbjct: 243 RIN----ELKFNTAEQ 254
>gi|160934964|ref|ZP_02082350.1| hypothetical protein CLOLEP_03839 [Clostridium leptum DSM 753]
gi|156866417|gb|EDO59789.1| hypothetical protein CLOLEP_03839 [Clostridium leptum DSM 753]
Length = 307
Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 67/135 (49%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+++ S E++ + E I ++ + P +P E ++ L +SI+ G + P
Sbjct: 14 SLDELFSSQEERDDAKLERVRDIPLNELHPFKDHPFKIQSDEEMKRLIESIQKFGTLTPA 73
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+ R + G Y++I+G RR A ++ + +PVI+R + + S+ + N+QR+ + P E
Sbjct: 74 LARPLPEGGYELISGHRRLAACQVLGIETMPVIVREMTDDESVIAMVDANLQREHILPSE 133
Query: 140 EALGYEQLISEYGYT 154
+A Y+ +
Sbjct: 134 KAFAYKMKRDALNHQ 148
>gi|160944485|ref|ZP_02091713.1| hypothetical protein FAEPRAM212_01995 [Faecalibacterium prausnitzii
M21/2]
gi|158444267|gb|EDP21271.1| hypothetical protein FAEPRAM212_01995 [Faecalibacterium prausnitzii
M21/2]
Length = 303
Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 71/130 (54%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E + E E I I + P ++P + E ++ +S++ +G++
Sbjct: 3 LKGADDIFSTEESRQEQQREQVQQIPIGELFPFKNHPFKVLDDESMQRTVESVEQYGVLS 62
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PLI R G Y+II+G RR AA++A L +PVI+R +D+ +++ + + N+QR+++ P
Sbjct: 63 PLIARPRPEGGYEIISGHRRQHAAQLAGLDTLPVIVRQMDDDAAVLLMVDSNLQRENILP 122
Query: 138 LEEALGYEQL 147
E A Y+
Sbjct: 123 SERAFAYKMK 132
>gi|17158718|ref|NP_478229.1| ParB family chromosome partitioning protein [Nostoc sp. PCC 7120]
gi|17134667|dbj|BAB77225.1| chromosome partitioning protein, ParB family [Nostoc sp. PCC 7120]
Length = 315
Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 17/255 (6%)
Query: 13 GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
GL L G+ + S + + I+ P PR YF+ L+ L SIK
Sbjct: 12 GLDNLFGDEEEQSLSDS-----------TLPLSQIILPPSQPRRYFDPVKLKSLANSIKE 60
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G+++P+ VR I+ Y++IAGERR +A ++A L E+ V+I D K + ++ +VEN+QR
Sbjct: 61 VGLLEPIAVRKIEEDKYELIAGERRLKACEIAGLEEISVVILECDEKKARKLRLVENLQR 120
Query: 133 KDLNPLEEALGYEQLISEYGYTQND------IGSIVGKSRSHVANILRILKLPSSVREMI 186
+DLN EE +G +L++E + + N++ + + +
Sbjct: 121 EDLNAYEETIGILELLAEELDLDQEAVVSLLYQMNNETKGNSNHNVMVSEEALAIQTIFL 180
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ +IS + L I +K + T+ V + +KR+ I + + E+
Sbjct: 181 QIGKISWESFVSNRLPLLKLPQDIQITLEKGQIEYTKAQVIARIKDNKKRQNILKKAIEE 240
Query: 247 EKYLTDLEKKISSKV 261
L+ +++ + +
Sbjct: 241 NLSLSAIKELVGDIL 255
>gi|313115429|ref|ZP_07800899.1| ParB-like partition protein [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622270|gb|EFQ05755.1| ParB-like partition protein [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 303
Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 71/130 (54%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E + E E I I + P ++P + E ++ +S++ +G++
Sbjct: 3 LKGADDIFSTEESRQEQQREQVQQIPIGELFPFKNHPFKVLDDESMQRTVESVEQYGVLS 62
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PLI R G Y+II+G RR AA++A L +PVI+R +D+ +++ + + N+QR+++ P
Sbjct: 63 PLIARPRPEGGYEIISGHRRQHAAQLAGLDTLPVIVRQMDDDAAVLLMVDSNLQRENILP 122
Query: 138 LEEALGYEQL 147
E A Y+
Sbjct: 123 SERAFAYKMK 132
>gi|320321510|gb|EFW77619.1| ParB family partitioning protein [Pseudomonas syringae pv. glycinea
str. B076]
Length = 328
Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 85/154 (55%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
++ + + + SI +P+ PR F++ + L +SI+ G+ +P++VR + NG +++ GE
Sbjct: 63 DQTLEEVDVSSIDVSPYQPRLVFDAVAISLLVESIREIGLGKPILVRPLPNGRNELVGGE 122
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+RA + + +++ + + ++ +A+ +N + + L + +Q
Sbjct: 123 RRWRAVTILGWDRITAVVKPMSDDMAMLLALADNEHEELTDYELARSYDRYLQNGNDKSQ 182
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
+ I +G +RS V+ L ++KLP+S+R+++ +
Sbjct: 183 SAIARRLGINRSVVSRCLDLMKLPTSIRQVLDQH 216
>gi|282600663|ref|ZP_06257683.1| ParB family protein [Subdoligranulum variabile DSM 15176]
gi|282571740|gb|EFB77275.1| ParB family protein [Subdoligranulum variabile DSM 15176]
Length = 280
Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 61/125 (48%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
I + + P +P + E + + SI+ +G++ P I R NG Y+++AG RR RA
Sbjct: 2 EIPLSELHPFKDHPFKVKDDEAMMETADSIRQYGVLVPAIARPDPNGGYELVAGHRRHRA 61
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
+++A +PVI+R++D+ + I + N+QR+ L P E A Y+ +
Sbjct: 62 SELAGKETMPVIVRDLDDDQATIIMVDSNLQRESLLPSERAFAYKMKLEAMKRQAGRPSK 121
Query: 161 IVGKS 165
Sbjct: 122 ENCSQ 126
>gi|218442253|ref|YP_002380581.1| parB-like partition protein [Cyanothece sp. PCC 7424]
gi|218175394|gb|ACK74124.1| parB-like partition protein [Cyanothece sp. PCC 7424]
Length = 400
Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/150 (35%), Positives = 87/150 (58%), Gaps = 13/150 (8%)
Query: 1 MSNNYSKR----RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRN 56
MS + K+ +L + +T E + I + I PR+
Sbjct: 1 MSPSKQKKPFAGKL---------TTPSPSWLTTDEVQTTSEEKSLIKLSDIHLPSTQPRH 51
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV 116
YF+ + L+ L SI HGI+QPL+VR ++ G Y+++AGERR+RAA + L+EVPV+++ +
Sbjct: 52 YFDPQSLKGLADSISQHGILQPLLVRPLETGGYELVAGERRYRAAGLVGLTEVPVVVKEL 111
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
++ S ++A++EN+QR+DLNP+EE G Q
Sbjct: 112 TDEESWQLALIENLQREDLNPVEETEGILQ 141
>gi|154483999|ref|ZP_02026447.1| hypothetical protein EUBVEN_01707 [Eubacterium ventriosum ATCC
27560]
gi|149735041|gb|EDM50927.1| hypothetical protein EUBVEN_01707 [Eubacterium ventriosum ATCC
27560]
Length = 282
Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 110/247 (44%), Gaps = 21/247 (8%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ I + + ++P + E +E+L +SI+ G++ P++VR ++ Y+II+
Sbjct: 20 ETTDGLKEIDVDKLHDFSNHPFKVSDDEKMEELTESIRERGVLLPILVRKTNDEEYEIIS 79
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
G RR AA++A L +VPVIIR + N + + + N+QR+++ P E+A ++ + +
Sbjct: 80 GHRRTHAARLAGLEKVPVIIRELSNDDATIVMVDSNIQREEILPSEKAYAFQMKLEAIHH 139
Query: 154 T-------QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
+ +G G S V+ +++ L + EM+ K++I++ A + S+
Sbjct: 140 KGIKGAESREVVGEANGLSGRQVSRYIKLTNLLPELLEMVDKKKIAIKLAVEIAELSESE 199
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS 266
++ + ++ K + + + E+K ++
Sbjct: 200 ------------QQEILDYFNLGYKVSLEQVKAIKNKEKSTDIIERPEEKTKES--TKVT 245
Query: 267 IKHRNNK 273
I + K
Sbjct: 246 ISRKKLK 252
>gi|60683308|ref|YP_213452.1| hypothetical protein BF3866 [Bacteroides fragilis NCTC 9343]
gi|60494742|emb|CAH09544.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
Length = 634
Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 104/235 (44%), Gaps = 11/235 (4%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ K ++ + I ++ P+ N R F L++L SI+ G++Q + V
Sbjct: 63 ETPQQATPKTPLATATAETDLDITAVHPSADNHRKTFNDTSLQELADSIREVGVLQAIAV 122
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEE 140
R G Y+II GERR+RA+ +A + I + + + ++++ EN+QR+ + P EE
Sbjct: 123 RPRTAGGYEIIYGERRYRASLLAGAKTIKATIYDHITDDEAEDMSLSENLQREQVCPTEE 182
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
A +++L+ + Y + S G+S ++ L++ +L + + E++ I++ A +
Sbjct: 183 ARAFKRLLEKGRYDMYSLVSRFGRSEKYIYTRLKLNELYAPIGELLDNGTITVSVAEEIS 242
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + L Q + ++ Y TDLE+
Sbjct: 243 TYETNIQKDVY----------ESHLKQGNRDDWSGYTLNLFKKHFEKYYTTDLEQ 287
>gi|209693688|ref|YP_002261616.1| putative chromosome partitioning protein ParB [Aliivibrio
salmonicida LFI1238]
gi|208007639|emb|CAQ77744.1| putative chromosome partitioning protein ParB [Aliivibrio
salmonicida LFI1238]
Length = 324
Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 58/298 (19%), Positives = 113/298 (37%), Gaps = 21/298 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS + +L+ ++S+ E ES I I + R +F+
Sbjct: 1 MSKKKDFK-------SLMNNKSKSLLDEEINEVKPGESVVLIPKEDIY-SSEQIRKFFDE 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E + +L +++ G IQP++V D YKI GE R+RAA ++ + +
Sbjct: 53 EYILELSKNMDDIGQIQPIVVTHNDIRGYKIQVGECRWRAANLSDKITHVECLVR--DAG 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGY-TQNDIGSIVGKSRSHVANILRILKLP 179
++ + EN+ R DL P E E L+ E G D+ ++V S ++ + + P
Sbjct: 111 TVLAQLSENLHRNDLTPFETGRALELLMEEQGIVENKDLANVVSLSEPRISAFRKAAQCP 170
Query: 180 SSVREMIRKEEISLGHARTLVST--SDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ I + + ++ +S ++ ++LV+ +++ K
Sbjct: 171 PYIELAYHNGIIRDVDTVNSLRIAGELSEVETKKLLESPVSRKEAKDLVKSLKASQKELK 230
Query: 238 KIFEGSREKEKYLTDLEKK-ISSKVG-LNIS--IKHRNNKGQFCIKYETNE---QLKI 288
+ ++ + S+K +S I N G I +E N+ L
Sbjct: 231 SAQVDEEQSSLEHQEVANENPSNKADQTKVSGVIPTSQNNG-IRISFEGNQGFIDLNG 287
>gi|331086541|ref|ZP_08335619.1| hypothetical protein HMPREF0987_01922 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410374|gb|EGG89806.1| hypothetical protein HMPREF0987_01922 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 299
Score = 56.6 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 92/241 (38%), Gaps = 8/241 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I I +P + E + DL +S+K+ G++ P
Sbjct: 6 GEKIKLTSIDELLGVVNEESAMEIDISKIHAFKDHPFKVLDDEKMTDLVESVKAKGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R Y++I+G RR AA A L +P I+R + + ++ + N+QR++L P
Sbjct: 66 VLLRPDGEDGYEMISGHRRMYAAVRAGLKTIPAIVRELSDDDAVIAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
E+A Y + ++ + + + + + + + +
Sbjct: 126 EKAFAYRMKMEAMKRQGKRTDLTSYQNETKLRSDEILSR-------QVGESRAQVQRYIR 178
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
L L ++ + ++ K I + K K +T L K++
Sbjct: 179 LTELIPELLDMVDAKKLNFTIAVDISYIDKEMQKWIYEY-IRDSGFIKPKQITALRKQLE 237
Query: 259 S 259
Sbjct: 238 E 238
>gi|296450837|ref|ZP_06892587.1| PRTRC system ParB family protein [Clostridium difficile NAP08]
gi|296260308|gb|EFH07153.1| PRTRC system ParB family protein [Clostridium difficile NAP08]
Length = 309
Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 91/235 (38%), Gaps = 14/235 (5%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L AL G ++ I++ ++ ++P + + + +L +S+++H
Sbjct: 15 LDALFGTTSEE-----------QAGIQQIALDNLHSFSNHPFKVLDDDKMIELSESVRTH 63
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G++ P IVR D G Y+IIAG RR RA ++A L +PVII+++ + S I + N+QR+
Sbjct: 64 GVLVPGIVRIKDTGGYEIIAGHRRKRACEIAGLKTMPVIIKDLTDDESTVIMVDSNIQRE 123
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
+L E+A Y+ + I + I +
Sbjct: 124 ELLISEKAFAYKMKYDALKRQGKR-SDLTSCQVGKKLAAEDISQNSEDSTRQILRYIHLT 182
Query: 194 G--HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
++ L + + + + L+Q N + +K
Sbjct: 183 ELLPVLLDMADHKQLPFNTAVELSYLKKEEQDILLQYMGNHEMVPSMKQAQEMKK 237
>gi|325662818|ref|ZP_08151387.1| hypothetical protein HMPREF0490_02127 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470870|gb|EGC74099.1| hypothetical protein HMPREF0490_02127 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 299
Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 98/241 (40%), Gaps = 8/241 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I+ I +P + E + DL +S+K++G++ P
Sbjct: 6 GEKIKLTSIDELLGVVNEESAMEIEINRIHAFKDHPFKVLDDEKMADLVESVKTYGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R+ Y++I+G RR AA +A L+ +P I+R + + ++ + N+QR++L P
Sbjct: 66 VLLRSDGENGYEMISGHRRMHAAVIAGLATIPAIVRELSDDDAVIAMVDANIQREELLPS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
E+A Y + + ++ + + I E + + ++
Sbjct: 126 EKAFAYRMKLEAMKRQGVRNDLTLCQNGTKYRTDVVI-------AEQVGESARNVQRYIR 178
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
L L ++ + ++ K I + K K +T L K++
Sbjct: 179 LTELIPELLDMVDAKKLNFTIAVDISYIDKEMQKWIYEY-IRDTGFIKPKQITVLRKQLE 237
Query: 259 S 259
Sbjct: 238 E 238
>gi|220916221|ref|YP_002491525.1| parB-like partition protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219954075|gb|ACL64459.1| parB-like partition protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 355
Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
Q+ + I + +I P+P PR F+ E L L SI+ +G++Q
Sbjct: 25 SAQAAKVLGNAEAELRLELREIPLDAIEPDPAQPRRVFDEEKLRSLVTSIRKYGVLQEPG 84
Query: 81 VRAIDNG------LYKIIAGERRFRAAKMASLSEVPV 111
V + Y++I GERR+RA+++A L+ +
Sbjct: 85 VVPVAGEGASAAVRYRLIWGERRWRASRLAGLTALRC 121
>gi|331000879|ref|ZP_08324519.1| ParB-like protein [Parasutterella excrementihominis YIT 11859]
gi|329570067|gb|EGG51814.1| ParB-like protein [Parasutterella excrementihominis YIT 11859]
Length = 406
Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
I I I P+P PR F + L+DL SI +G+IQP++VR G + A
Sbjct: 19 KPVRKILDIDISLISPDPLQPRKEFNEDKLQDLAASIGEYGLIQPIVVRKQGEGYVIV-A 77
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNK 119
GERR+RA ++ V I++ ++
Sbjct: 78 GERRYRACQILGKESVSCILQEKEDP 103
>gi|67920668|ref|ZP_00514188.1| ParB-like partition protein [Crocosphaera watsonii WH 8501]
gi|67858152|gb|EAM53391.1| ParB-like partition protein [Crocosphaera watsonii WH 8501]
Length = 335
Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 97/226 (42%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ S I I IV + PRNY + + + L ++I+ G P +VR I++ Y+
Sbjct: 35 PSSNQTASYQLIPISQIVTWENQPRNYIDQQAINKLAKTIEVEGFKYPCLVRPIEDNKYQ 94
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
I+AGERR+ AA++A +E+P +I N+++ +LE A+ EN+ R+DLNP+E +L+S+
Sbjct: 95 IVAGERRYLAAQLALKTEIPCLIENLNDTDALEAALKENLLREDLNPIEVLNSLLRLLSD 154
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQ 210
D + + K S + TL + +
Sbjct: 155 QLQLSEDDVCKLLYEMKRRRETHQEKKKSSGEINFPNSTDDRYQTVITLFESYGYNWYSY 214
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
V K+ + + E K + S + +K L +
Sbjct: 215 VCSQLKLRNLPKDVYQAIATGQIEYSKGLKFKSIKDDKLRQSLLNE 260
>gi|148550892|ref|YP_001260322.1| parB-like partition protein [Sphingomonas wittichii RW1]
gi|148503303|gb|ABQ71555.1| parB-like partition protein [Sphingomonas wittichii RW1]
Length = 298
Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA-IDNGLYK 90
+ + + + P+P NPR +F+ + +L SI++ G++QP+IVR +G +
Sbjct: 17 AHESARRVEELPLDWLTPDPGNPRTHFDEAEMAELAASIEARGVLQPIIVRPKNGDGKHV 76
Query: 91 IIAGERRFRAA 101
I GERR+RA+
Sbjct: 77 IRMGERRYRAS 87
>gi|325663364|ref|ZP_08151814.1| hypothetical protein HMPREF0490_02555 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470818|gb|EGC74048.1| hypothetical protein HMPREF0490_02555 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 196
Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 72/156 (46%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I+ I +P + E + DL +S+K +G++ P
Sbjct: 6 GEKIKLTSIDELLGVVNEESAMEIEINRIHAFKDHPFKVLDDEKMADLVESVKVNGVLTP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+++R+ Y++I+G RR AA +A L+ +P I+R + + ++ + N+QR++L
Sbjct: 66 VLLRSDGENGYEMISGHRRMHAAVIAGLATIPAIVRELSDDDAVIAMVDANIQREELLTS 125
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
E+A Y + + ++ + R
Sbjct: 126 EKAFAYRMKLEAMKRQGVRVDLTCDQNEHKLGKKSR 161
>gi|309779236|ref|ZP_07673999.1| partitioning protein [Ralstonia sp. 5_7_47FAA]
gi|308922040|gb|EFP67674.1| partitioning protein [Ralstonia sp. 5_7_47FAA]
Length = 336
Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 100/263 (38%), Gaps = 17/263 (6%)
Query: 12 RGLAALIGEVNQSID---SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQ 68
RGL +G+ + T + + + NP N R ++ + +++
Sbjct: 41 RGL---LGQPVPTPAFSAESAAATNASERRVIKVPLERLQENPLNARRIYDPQIVQERAA 97
Query: 69 SIKSHGIIQPLIVRAID--NGLYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIA 125
SI +HG P + G Y +I G R RA A + + + ++
Sbjct: 98 SIATHGQQTPGLAAPDPARPGWYVLIDGHYRKRALAAAGKPEMDCFVEDGLSDIDFYRLS 157
Query: 126 IVENVQRKDLNPLEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
V N QR + L+ A+ + + L + DI I G S V L +LKLP SV E
Sbjct: 158 FVLNEQRSGQSVLDNAIAWRQLLDEGKVKKEEDICEITGVSAGTVNKTLALLKLPESVLE 217
Query: 185 MIRKEE----ISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
++++ I+ G+ TL + + +V + + + V++ ++ +
Sbjct: 218 VMKERPAGIGIATGYELTLYFKTAGEDRTRELVHRVLEEGLSSRDVEQIRKVAQEGRTRK 277
Query: 241 EGSREKEKYLTDLEKKISSKVGL 263
++ + E + +G
Sbjct: 278 VKEVSRQYKIRSAEGDL---LGT 297
>gi|67923736|ref|ZP_00517201.1| ParB-like partition protein [Crocosphaera watsonii WH 8501]
gi|67854400|gb|EAM49694.1| ParB-like partition protein [Crocosphaera watsonii WH 8501]
Length = 312
Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 68/110 (61%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
S + + I P PR YF+ L L SIK GI+QPL+VR +D+G Y+++AGER
Sbjct: 29 SSPQFLPLSDISLPPSQPRKYFDPYSLNQLAYSIKRDGILQPLLVRPLDDGKYELVAGER 88
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
R+R AK L VPV+I+++ + + I++ EN+QR+DLNP+EE
Sbjct: 89 RYRVAKQLELDSVPVLIKSLTVQEAKLISLTENLQREDLNPVEETEAVLD 138
>gi|295103616|emb|CBL01160.1| ParB-like partition proteins [Faecalibacterium prausnitzii SL3/3]
Length = 308
Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Query: 12 RG-LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
+G L + + + E + E E I I + P ++P + E ++ +S+
Sbjct: 3 KGSLNVSLKGADDIFSTEESRQEQQREQVQQIPIGELFPFKNHPFKVLDDESMQRTVESV 62
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+ +G++ PLI R G Y+II+G RR AA++A L +PVI+R +D+ +++ + + N+
Sbjct: 63 EQYGVLSPLIARPRAEGGYEIISGHRRQHAAQLAGLDALPVIVRQMDDDAAVLLMVDSNL 122
Query: 131 QRKDLNPLEEALGYEQL 147
QR+++ P E A Y+
Sbjct: 123 QRENILPSERAFAYKMK 139
>gi|310825818|ref|YP_003958175.1| hypothetical protein ELI_0192 [Eubacterium limosum KIST612]
gi|308737552|gb|ADO35212.1| hypothetical protein ELI_0192 [Eubacterium limosum KIST612]
Length = 308
Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ N + + + + ++ E I I I P +P
Sbjct: 1 MAANKK-------INMPLPSADDLFKTDAERQNDGLEKVMEIPIEEISSFPDHPFKLQMD 53
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E + ++ +SI+ +G++ P +VR + G Y++++G RR A+++A + +P I+RN+ +
Sbjct: 54 EAMSEMVESIREYGVLSPALVRPKEGGGYEMVSGHRRKMASEIAEKTTIPCIVRNLTDDE 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
+ + + N+QR+++ P E+A Y+ + + +
Sbjct: 114 ATILMVDSNLQRENILPSEKAYAYKMKLEALKHQGKKMDE 153
>gi|160945871|ref|ZP_02093097.1| hypothetical protein FAEPRAM212_03404 [Faecalibacterium prausnitzii
M21/2]
gi|158443602|gb|EDP20607.1| hypothetical protein FAEPRAM212_03404 [Faecalibacterium prausnitzii
M21/2]
Length = 280
Score = 56.2 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 62/125 (49%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
I + + P ++P + E + + SI+ +G++ P I R G Y+++AG RR RA
Sbjct: 2 EIPLSELHPFKNHPFKVKDDESMLETADSIRQYGVLVPAIARPDPEGGYELVAGHRRHRA 61
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
+++A +PVI+R++D+ ++ I + N+QR+ L P E A Y+ +
Sbjct: 62 SELAEKETMPVIVRDLDDDAATIIMVDSNLQRESLLPSERAFAYKMKLDAMKRQAGRPTK 121
Query: 161 IVGKS 165
Sbjct: 122 ENCSQ 126
>gi|291535027|emb|CBL08139.1| ParB-like partition proteins [Roseburia intestinalis M50/1]
Length = 293
Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 53/301 (17%), Positives = 107/301 (35%), Gaps = 18/301 (5%)
Query: 1 MSNN--YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ +K +L L G + E + + ++P
Sbjct: 1 MNKKGSAAKVKLNS-FDDLFGSS--------EMQTAGAEQIINAPLAELHDFKNHPFRVV 51
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ E +E+ +SI+ +G++ P I R G Y++IAG RR R ++ A E+PVI+RN +
Sbjct: 52 DDEKMEETTESIRQYGVLVPGIARPRTGGGYELIAGHRRKRGSQRAGKLEMPVIVRNYSD 111
Query: 119 KSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ I + N+QR+D+ P E+A Y+ + G A
Sbjct: 112 DEATIIMVDSNIQREDILPSEKAKAYKMKYEAMKHQGKKSGKNTLDEVGETAGESAKTVQ 171
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+ + + A+ + +++ + +E ++ K
Sbjct: 172 RYIWISRLSDSLLDMVDAKKIGIMQAVDLSFLSEDAQQWVLVAIQETNVVITTQQSAMLK 231
Query: 239 IFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKY---ETNEQLKIICSLLGE 295
+ E + + + V + IK + + + E+++ I L E
Sbjct: 232 ESDKKGELTFPMVRMMLEKEKTVERKVVIKTE----RINNYFPATYSREEIENIIYQLLE 287
Query: 296 N 296
N
Sbjct: 288 N 288
>gi|94971944|ref|YP_593984.1| parB-like partition proteins [Deinococcus geothermalis DSM 11300]
gi|94553995|gb|ABF43910.1| parB-like partition protein [Deinococcus geothermalis DSM 11300]
Length = 303
Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 49/129 (37%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G++ + + T+ +++ + P+ PR YF LE L QS++ G++QP
Sbjct: 10 GDLAGLLGRAQDLTQPAETDTRRVALSELRPHGGQPRRYFTPSELEALTQSVRERGVLQP 69
Query: 79 LIVRA-IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
L+VR D Y+I AGERR+RAA A L +VPV+IR + ++ LE+ +VEN+QR++LNP
Sbjct: 70 LLVRPAPDGSGYEIAAGERRYRAALAAGLPDVPVLIRPLSDEQMLEVGLVENLQRENLNP 129
Query: 138 LEEALGYEQ 146
L+E G +
Sbjct: 130 LDEVEGTLR 138
>gi|332706755|ref|ZP_08426816.1| ParB family protein [Lyngbya majuscula 3L]
gi|332354639|gb|EGJ34118.1| ParB family protein [Lyngbya majuscula 3L]
Length = 322
Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 47/117 (40%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
PE++ + + + + IV PR+YF+ + ++ L +S+ GI+QPL+VR + +
Sbjct: 35 PERQEDASALAAKLVPLSQIVLPATQPRHYFDPKAMQSLVESVGREGILQPLLVRPVGDK 94
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
Y+++AGERR+RAA+ SLSEVPV IR + + +++ A+ EN+QR+DLNP+EE G
Sbjct: 95 -YELVAGERRYRAAQECSLSEVPVTIREMSDTQAIQYALTENLQREDLNPVEETEGI 150
>gi|295136107|ref|YP_003586783.1| partitioning protein [Zunongwangia profunda SM-A87]
gi|294984122|gb|ADF54587.1| putative partitioning protein [Zunongwangia profunda SM-A87]
Length = 598
Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + I + +SI ++P+P PR F + L+ L +SIK HG++Q
Sbjct: 16 TAAKKEVKEKLTQKAIGLQIENLSIAKVIPDPMQPRKTFNEDALKQLSESIKKHGVLQ-P 74
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
I + I+ GERR+RA+K+A+ +P I+ N LEI I+EN+QR+D+ P E
Sbjct: 75 ITVRKSGNDFIIVMGERRYRASKLANKKSIPCIVWEYKNNDVLEIQIIENLQRQDVEPTE 134
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA L Y +I +G++ + + L++ L + +R E+++ +
Sbjct: 135 EAEAIAYLSE--RYAPTEIAKRLGRTDNFIRQRLKLAGLIEGFKHFVRNGEMTISLGAGV 192
Query: 200 VST-SDPLSLAQVIVSKKMSVRDTEELVQ 227
+ + + + S +++
Sbjct: 193 ALFEPEEQQMLLETMGEDFSAHQINRMIK 221
>gi|225874742|ref|YP_002756201.1| ParB family protein [Acidobacterium capsulatum ATCC 51196]
gi|225792513|gb|ACO32603.1| ParB family protein [Acidobacterium capsulatum ATCC 51196]
Length = 529
Score = 56.2 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 2/189 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ + + + P+ NPR FE L++L +SI++ G++ PL+VR + +
Sbjct: 2 ETQVINATEYRNVPLFLLNPSRTNPRRTFEDAALKELAESIRAQGVLSPLLVRPLTENGF 61
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ--L 147
+I+ GERR+RAA++A VPV IR + + +LE +VEN+ R +++P+EEA G+
Sbjct: 62 EIVFGERRYRAAQIAGQDTVPVRIRQMSDAEALEAQLVENLIRSEIHPMEEAQGFRALLA 121
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ E Y+ I + VGKS VA+ L++ L + E EI +GHA L
Sbjct: 122 LEEPKYSIEQIAAKVGKSPGFVASRLKLTDLTPAAVEAFYAGEIGVGHALLLAKLPADQQ 181
Query: 208 LAQVIVSKK 216
+ K
Sbjct: 182 KQALSACFK 190
>gi|75812783|ref|YP_320400.1| ParB family protein [Anabaena variabilis ATCC 29413]
gi|75705539|gb|ABA25211.1| ParB family protein [Anabaena variabilis ATCC 29413]
Length = 328
Score = 55.8 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 13 GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
GL L G+ + S + + I+ P PR YF+ L+ L SIK
Sbjct: 12 GLDNLFGDDEEKSLSDS-----------TLPLSQIILPPSQPRRYFDPVKLKSLADSIKE 60
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G+++P++VR I Y+++AGERR +A ++A L +PV+I D K + ++ +VEN+QR
Sbjct: 61 VGLLEPIVVRKIQEDKYEMVAGERRLKACEIAKLEAIPVVIIECDEKKARKLRLVENLQR 120
Query: 133 KDLNPLEEALGY 144
+DLN EE +G
Sbjct: 121 EDLNAYEETIGI 132
>gi|158339574|ref|YP_001520963.1| ParB family chromosome partitioning protein [Acaryochloris marina
MBIC11017]
gi|158309815|gb|ABW31431.1| chromosome partitioning protein, ParB family, putative
[Acaryochloris marina MBIC11017]
Length = 292
Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 8/230 (3%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
I I +I + PR YF +E L L S+K HG+++PL+VR + NG Y+++AGERR RAA
Sbjct: 22 IPIKNIHLPTNQPRKYFNAEKLAQLVTSVKEHGVLEPLLVRPLKNGEYELVAGERRLRAA 81
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
K A L+EVP+I + ++N+ ++ +A++EN+QR+DLNP+EE L+ +
Sbjct: 82 KEAGLTEVPIIAKQLNNREAVHVALIENLQREDLNPIEETDAILDLLGLVLELNKEQVIA 141
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRD 221
+ H + + + ++ + + + + S + + K+
Sbjct: 142 LFYQAHHAKHRGQ-----ELGQNVLSQLDTVQQTMQEVGRFSIDSFRSSRLPLLKLPEDV 196
Query: 222 TEELVQEQDNKKEKRKKIFEGSREKEKYL--TDLEKKISSKVGLNISIKH 269
E L Q + + ++ L T + +++S K + + I+
Sbjct: 197 LEVLRQGLLEYTKCQAIARVSDKKVRANLLNTAITEQLSLK-DIKLEIQS 245
>gi|94314739|ref|YP_587948.1| plasmid partition protein [Cupriavidus metallidurans CH34]
gi|93358591|gb|ABF12679.1| plasmid partition protein [Cupriavidus metallidurans CH34]
Length = 338
Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 47/251 (18%), Positives = 99/251 (39%), Gaps = 11/251 (4%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + ++ + I I + NP N R ++ +++ SI +HG P +
Sbjct: 52 PQSTFSAESDESVIEGRTLIKIPIAQLHDNPFNARRIYDPAVVQERAASIATHGQKTPGL 111
Query: 81 VRAIDNG--LYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
+ Y +I G R RA A L I ++ + ++ + N QR D +
Sbjct: 112 AASDPTRPGHYILIDGHYRKRALASAGKLEMECFIETDLSDLDFYRLSFLLNEQRSDQSA 171
Query: 138 LEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE----IS 192
L+ A+ + + L +++I + G S V L +LKLP SV ++R+ I+
Sbjct: 172 LDNAIAWRQLLDEGKVQKEDEICELTGMSAGTVNKTLALLKLPESVLAVMRERPSAIGIA 231
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
G+ TL + + ++ M+ + V+ + ++ K ++ +
Sbjct: 232 TGYELTLYCKVAGEDRTRDLATRIMNDGMSSREVEAIRKQAQEGKSRKVKEISRQYKIRT 291
Query: 253 LEKKISSKVGL 263
++ +G
Sbjct: 292 ESGQL---LGT 299
>gi|305666026|ref|YP_003862313.1| putative ParB-like chromosome partitioning protein [Maribacter sp.
HTCC2170]
gi|88710801|gb|EAR03033.1| putative ParB-like chromosome partitioning protein [Maribacter sp.
HTCC2170]
Length = 331
Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 49/227 (21%), Positives = 86/227 (37%), Gaps = 3/227 (1%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-D 85
+ ++ + + I I N HNPR F E ++L SI GI+ PLIV
Sbjct: 2 TEDETKLNYQDEIQYLPISKIEANKHNPRQRFSEEEEDELIASILEKGILNPLIVFKKSG 61
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVII--RNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
+ Y I+ GERRFRA+ +L E+P I D SL + + +KD ++
Sbjct: 62 SDEYVILDGERRFRASNKLNLKELPARILLDEPDKLESLSLMFHIHHVQKDWTQFSISIT 121
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS 203
+I E G + ++ + + +E I +
Sbjct: 122 LIDIIKEMGMNPKRLSKNDRAQLIKKTSLSNYKINRYLIFQDYPQEVIDRFLRSEIEEEQ 181
Query: 204 DPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
+P + +++ +R +L+ E K K I ++K +
Sbjct: 182 EPGADPDILLEMYRPIRQITKLMPELLKKYPVEKIIDSCIKKKANDV 228
>gi|17227381|ref|NP_478432.1| ParB family chromosome partitioning protein [Nostoc sp. PCC 7120]
gi|17134780|dbj|BAB77337.1| chromosome partitioning protein, ParB family [Nostoc sp. PCC 7120]
Length = 314
Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 78/327 (23%), Positives = 140/327 (42%), Gaps = 60/327 (18%)
Query: 5 YSKRRLG----RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
+K+RL RG+ L+ + ISIH I PR +F+
Sbjct: 1 MTKKRLEVPKMRGVEDLL------------TMDVDASPITTISIHKIRVAK-QPRRWFDP 47
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E + L QS++ HGI++PL+VR + NG Y++IAGERR RAA ASL+EVP++ + + +K
Sbjct: 48 EKMSHLVQSVREHGILEPLLVRPLGNGEYELIAGERRLRAALEASLAEVPIVSKELTDKQ 107
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV------------------ 162
+L++A++EN+QR+DLNP+EE +L++ + +
Sbjct: 108 ALQVALLENLQREDLNPVEEVEAILELLAIDLDVSIEDVKSILNEAANAKKRNLELTGNV 167
Query: 163 ----------------GKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
+ S + L +L LP+ V E++R+ ++ ART+ D
Sbjct: 168 SRQLEQIEFILAGIGKFNAESFRTSRLPLLSLPADVMEVLRQGQLEFTKARTIARVKDQQ 227
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK--EKYLTDLEKKISSKVGLN 264
A ++ S ++ + + + + EK K T++ K++
Sbjct: 228 QRADLLSSAITQNLSLTQIKELIKQLESAQTTPAAATPEKVLSKRYTEIGKRLQQ---TK 284
Query: 265 ISIKHRNNKGQFCIKYETNEQLKIICS 291
+ + K + L+ +
Sbjct: 285 LWKDDKKRK-KLE---RLLNDLEKLLD 307
>gi|67925781|ref|ZP_00519082.1| ParB-like partition protein [Crocosphaera watsonii WH 8501]
gi|67852374|gb|EAM47832.1| ParB-like partition protein [Crocosphaera watsonii WH 8501]
Length = 296
Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 84/134 (62%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + S +I + I I PR F+ E L +L SI+ +GI++
Sbjct: 1 MAQSRKRASSKSIDNPSIAPIGQWVDIEQIKLPHRQPRRSFDREKLVELTASIEEYGILE 60
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PLIVR +++ LY+++AGERR+RAAK A +++PVI++++D + + E+A++EN+QR DLN
Sbjct: 61 PLIVRPLNDRLYELVAGERRYRAAKNAGKTQIPVIVKDIDEQQAFELALLENIQRDDLNA 120
Query: 138 LEEALGYEQLISEY 151
++E G +LI ++
Sbjct: 121 IDETEGMLELIRQH 134
>gi|313115709|ref|ZP_07801162.1| ParB-like partition protein [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310621927|gb|EFQ05429.1| ParB-like partition protein [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 302
Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 71/130 (54%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E + E E I I + P +P + E ++ +S++ +G++
Sbjct: 3 LKGADDIFSTEESRQEQQREQVQQIPIGELFPFKDHPFKVLDDESMQRTVESVEQYGVLS 62
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PLIVR G Y+II+G RR AA++A L +PVI+RN+D+ +++ + + N+QR+ + P
Sbjct: 63 PLIVRPRPEGGYEIISGHRRQHAAQLAGLDTLPVIVRNMDDDAAVLLMVDSNLQRETILP 122
Query: 138 LEEALGYEQL 147
E A Y+
Sbjct: 123 SERAFAYKMK 132
>gi|148240885|ref|YP_001220386.1| putative ParB-like (korB) partition protein [Bradyrhizobium sp.
BTAi1]
gi|146411261|gb|ABQ39714.1| putative ParB-like (korB) partition protein [Bradyrhizobium sp.
BTAi1]
Length = 340
Score = 55.8 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
AL Q ID+ E TI CI+I I +P PR F+ + LE+L +S++ HG+
Sbjct: 16 ALDLSFKQLIDAAEDGAATI-GQPTCIAIDRIDEDPDQPRRSFDQQKLEELAESVRQHGV 74
Query: 76 IQPLIVRA-IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
+QP+++R + G Y I+ G RR+RAAK A L ++P I V + + ++EN+QR D
Sbjct: 75 LQPIVLRQATEEGRYVIVMGARRYRAAKRAGLRDIPAFIHAV-GSADRYVQMIENIQRDD 133
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
LN E A + E G Q DI +GK R V+ + +P + +++
Sbjct: 134 LNAPEIA-AFIADRLEQGDNQADISRKLGKPRDWVSRYASVQSMPQ-----FLRSKLAGS 187
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDT 222
R + + + +++
Sbjct: 188 SIRAVYELYQAWREQPNAIETLCAAQES 215
>gi|217978328|ref|YP_002362475.1| parB-like partition protein [Methylocella silvestris BL2]
gi|217503704|gb|ACK51113.1| parB-like partition protein [Methylocella silvestris BL2]
Length = 322
Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 8/179 (4%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ I IV NP NPR F + +E L SI HGI Q + D Y ++ GE
Sbjct: 8 AQKLRLIPPSEIVQNPENPRLVFRQDEMESLMLSIDKHGI-QVPLTVYRDGNTYTLLDGE 66
Query: 96 RRFRAAKMASLSEVPVIIR-NVDNKSSLEIAIVENVQRKDLNPL------EEALGYEQLI 148
RR+R A+ +L VP I++ +L + + R+ + + +
Sbjct: 67 RRWRCARKLNLKTVPAIVQSKPSELDNLVLMYNIHSLREQWDYYTIASKLQRVCALYEQE 126
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + + G +R + ++ LP +EM+ E + L
Sbjct: 127 HGQFPNEIILSELTGLTRGAIRRCQLLIDLPERFKEMLLSELDKPKSQQRLSEDFFIEM 185
>gi|126656982|ref|ZP_01728160.1| chromosome partitioning protein, ParB family [Cyanothece sp.
CCY0110]
gi|126621820|gb|EAZ92529.1| chromosome partitioning protein, ParB family [Cyanothece sp.
CCY0110]
Length = 302
Score = 55.8 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
Query: 20 EVNQSIDSPEKKTETIPESQ-DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ +Q DS +K + + I I PR F E L++L SI+ +GI++P
Sbjct: 2 DQSQKRDSSKKMDKQPIAPIGQWLDIEQIQLPQRQPRRSFNQEKLDELTASIEEYGILEP 61
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
LIVR +++ LY+++AGERR+RAAK A +++PVI++++D + + E+A++EN+QR DLN +
Sbjct: 62 LIVRPLNDHLYELVAGERRYRAAKNAQKTQIPVIVKDIDEQQAFELALLENMQRDDLNAI 121
Query: 139 EEALGY 144
+E G
Sbjct: 122 DETEGM 127
>gi|86141921|ref|ZP_01060445.1| hypothetical protein MED217_02280 [Leeuwenhoekiella blandensis
MED217]
gi|85831484|gb|EAQ49940.1| hypothetical protein MED217_02280 [Leeuwenhoekiella blandensis
MED217]
Length = 595
Score = 55.5 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 15/227 (6%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
S + R + ++ + + I P+ PR F +
Sbjct: 6 STKMKRSR-----------AKSTAKKEVNGKKSEVLQIQNLPLGKIKPDLEQPRKTFNDD 54
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
L+ L +SI+ HG++Q I NG Y I+ GERR+RA+K+A VP I+R +
Sbjct: 55 ALQQLSESIEKHGVLQ-PITVRQLNGHYIIVMGERRYRASKLAGKKTVPCIVRTYETNDI 113
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
LE+ I+EN+QR+D+ P EEA L Y +I +G++ + + L++ L
Sbjct: 114 LEVQIIENLQRQDVEPTEEAEAIAYLSE--KYAPTEIAKRLGRTDNFIRQRLKLAGLIDG 171
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQ-VIVSKKMSVRDTEELVQ 227
++ +R E+++ + + + S +++
Sbjct: 172 FKQFVRNGEMTISLGVGVALFEPEQQQMMLETMGEDFSAHQINRMIK 218
>gi|240126767|ref|ZP_04739653.1| parB-like partition protein [Neisseria gonorrhoeae SK-92-679]
gi|268685345|ref|ZP_06152207.1| plasmid partition-associated transcriptional repressor protein
[Neisseria gonorrhoeae SK-92-679]
gi|295788846|ref|YP_003600461.1| ParB [Neisseria gonorrhoeae]
gi|268625629|gb|EEZ58029.1| plasmid partition-associated transcriptional repressor protein
[Neisseria gonorrhoeae SK-92-679]
gi|294769587|gb|ADF36662.1| ParB [Neisseria gonorrhoeae]
Length = 305
Score = 55.5 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 47/244 (19%), Positives = 90/244 (36%), Gaps = 16/244 (6%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+ L+G E + + + SI +P PR F+ +++L SI+
Sbjct: 14 LSELLG-----------NAEVSSGTPLRLPLASIKEDPDQPRKEFDEGKIQELANSIQER 62
Query: 74 GIIQPL-IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G+ P+ + ++ + G+Y I G RR+RA+ +A LSE+P I ++ I +
Sbjct: 63 GVKTPISVRQSSEEGVYVINHGARRYRASLLAGLSEIPAYI----DQDYSLIDQAVENIQ 118
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
+D E + G + I +GKS + V +L LP + ++S
Sbjct: 119 RDNLTPREIADVIGRLLAEGMKKGQIAEKMGKSPAFVTQHANLLDLPEPLANAFNSGKVS 178
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
++ V T V+ K + ++
Sbjct: 179 DLTVINDLNALYKKEPEAVEDLLSNEDEITRSSVRNLKEFLNSDPKNSADADHEKPSKAK 238
Query: 253 LEKK 256
+++K
Sbjct: 239 VKEK 242
>gi|317165630|gb|ADV09169.1| ParB [Neisseria gonorrhoeae TCDC-NG08107]
Length = 305
Score = 55.5 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 48/244 (19%), Positives = 90/244 (36%), Gaps = 16/244 (6%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+ L+G E + + + SI +P PR F+ +++L SI+
Sbjct: 14 LSELLG-----------NAEVSSGTPLRLPLASIKEDPDQPRKEFDEGKIQELANSIQER 62
Query: 74 GIIQPL-IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G+ P+ + ++ + G+Y I G RR+RA+ +A LSE+P I ++ I +
Sbjct: 63 GVKTPISVRQSSEEGVYVINHGARRYRASLLAGLSEIPAYI----DQDYSLIDQAVENIQ 118
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
+D E + G + I +GKS + V +L LP + +IS
Sbjct: 119 RDNLTPREIADVIGRLLAEGMKKGQIAEKMGKSPAFVTQHANLLDLPEPLANAFNSGKIS 178
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
++ V T V+ K + ++
Sbjct: 179 DLTVINDLNALYKKEPEAVEDLLSNEDEITRSSVRNLKEFLNSDPKNSADADHEKPSKAK 238
Query: 253 LEKK 256
+++K
Sbjct: 239 VKEK 242
>gi|32442171|gb|AAP82046.1| hypothetical protein [Stenotrophomonas maltophilia]
Length = 157
Score = 55.5 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 226 VQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNE 284
+ R K K+ + LE+++ +G + I+ G + Y +
Sbjct: 85 ARLAKEIDRSRGKRDRDDVHKDADIAHLERRLGEHLGTTVQIETGAGHGGALRLFYTDLD 144
Query: 285 QLKIICSLLG 294
L + LG
Sbjct: 145 TLSGLLERLG 154
>gi|189912850|ref|YP_001964739.1| ParB-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|189913175|ref|YP_001964404.1| Putative chromosome partitioning protein ParB [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|167777526|gb|ABZ95826.1| ParB-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167781243|gb|ABZ99540.1| Putative chromosome partitioning protein ParB [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 273
Score = 55.5 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 4/219 (1%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG-LY 89
+ E + + I + I P+ H PR +G+E+L Q++K+ G++QP+IV + Y
Sbjct: 16 QAENLDGTIRTIRMDRIQPSEHQPRQE-RKKGIEELAQTLKADGLLQPIIVSKGEKEGNY 74
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
KIIAGERR+ AAK E+ I N +K ++A++EN+QR++L+P EE L +
Sbjct: 75 KIIAGERRYHAAKSLGWPEIECKILNRPDKEIYKLAVIENLQRENLSPYEEVDALLFLKN 134
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
+ YT ++G + GKSRS++ +L I + + E +K EI + + +
Sbjct: 135 AHNYTDQELGDLFGKSRSYMTEVLSITSMSKTDLEKCKKNEIHNKNLLVQAAQAAKKGSL 194
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
++ + V++ + ++ K + +
Sbjct: 195 DEFLTLYHK--GALKTVKDAKDFNKQTKSGVVPNSKPSP 231
>gi|257438290|ref|ZP_05614045.1| conserved hypothetical protein [Faecalibacterium prausnitzii
A2-165]
gi|257199252|gb|EEU97536.1| conserved hypothetical protein [Faecalibacterium prausnitzii
A2-165]
Length = 337
Score = 55.5 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 71/130 (54%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E + E E I I + P ++P + E ++ +S++ +G++
Sbjct: 3 LKGADDIFSTEESRQEQQREQVQQIPIGELFPFKNHPFKVLDDESMQRTVESVEQYGVLS 62
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PLI R G Y+II+G RR AA++A L +PVI+R +D+ +++ + + N+QR+++ P
Sbjct: 63 PLIARPRPEGGYEIISGHRRQHAAQLAGLDALPVIVRQMDDDAAVLLMVDSNLQRENILP 122
Query: 138 LEEALGYEQL 147
E A Y+
Sbjct: 123 SERAFAYKMK 132
>gi|294648583|ref|ZP_06726047.1| partitioning protein [Acinetobacter haemolyticus ATCC 19194]
gi|292825509|gb|EFF84248.1| partitioning protein [Acinetobacter haemolyticus ATCC 19194]
Length = 299
Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 10/283 (3%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + ++ + E + + I I +P+ PR F + +EDL SI+ G++Q
Sbjct: 15 NTQKHQHAQKEHINDVKELRRNVQITDIQASPNQPRKLFNQQDIEDLAASIEEIGLLQ-P 73
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
I N Y++IAGERR +A + + + + VII + ++ + + EN++R+DL E
Sbjct: 74 IAVRRINDKYELIAGERRLKAHQFLNKNTIEVIIIDASDEEVALLTLAENLKREDLTDYE 133
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
+G L + + + +G +R + L KLP + E + K+ L
Sbjct: 134 IYVGLTSLDEKLKKNKQKLAKSLGMNREDMYKYLSFEKLPGELIEDLEKQPSLLARTAAT 193
Query: 200 VSTSDPLSLAQVIVSKKMSV----RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + K ++ + EQ +KIF+ +E T +
Sbjct: 194 AVKKFLSDHDENHENAKKALFEAWSKLLKKEVEQTKLTSLAEKIFKSKETEEVIQTSIVH 253
Query: 256 KIS--SKVGLNISIKHRNNKGQFCI-KYE--TNEQLKIICSLL 293
KI KV NI H K I +++ ++L+ +
Sbjct: 254 KIEYDGKVAGNIKFDHNTLKVSLKIGQFDDQNLQELEAFLKRM 296
>gi|323693232|ref|ZP_08107450.1| hypothetical protein HMPREF9475_02313 [Clostridium symbiosum
WAL-14673]
gi|323502715|gb|EGB18559.1| hypothetical protein HMPREF9475_02313 [Clostridium symbiosum
WAL-14673]
Length = 296
Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/283 (18%), Positives = 117/283 (41%), Gaps = 25/283 (8%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + E+ E + + +P + E +E+ +SI+ +G++ P
Sbjct: 16 DKFEDLFGGSAEQESSAEQIINAPLTDLHTFKDHPFRVEDDEKMEETTESIRQYGVLVPG 75
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
I R + G Y+IIAG RR R +++A E+PVI+RN + + I + N+QR+D+ P E
Sbjct: 76 IARPREGGGYEIIAGHRRKRGSELAGKKEMPVIVRNYTDDEATIIMVDSNIQREDILPSE 135
Query: 140 EALGYEQLISEYGYTQ--------NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
+A Y+ + +++G G++ V + + +L + M+ +++
Sbjct: 136 KARAYKMKYEAMKHQGKKSGKNTLDEVGEAAGENAKKVQRYIWLSRLSEELLAMVDSKKL 195
Query: 192 SLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ ++ V ++ S + + + + R L
Sbjct: 196 GFSQGVDISFLTEEAQQWVQAVIEEKSCNISMVQSAKIKEYGKTGELTLAMVR-----LI 250
Query: 252 DLEKKISSKVGLNISIKHRNNKGQFCIKY----ETNEQLKIIC 290
E+K + +++K + +Y ++E+++ I
Sbjct: 251 LTEEKPKER---KVTLKAD----KIS-EYFAEDYSSEEIEGII 285
>gi|319941360|ref|ZP_08015689.1| hypothetical protein HMPREF9464_00908 [Sutterella wadsworthensis
3_1_45B]
gi|319805121|gb|EFW01948.1| hypothetical protein HMPREF9464_00908 [Sutterella wadsworthensis
3_1_45B]
Length = 368
Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKI 91
S I++ I + PR F+ + L DL +SI+++G++QP+++R N Y I
Sbjct: 21 QPGNSVLEIALDKIERDESQPRKNFDEDTLRDLAESIEAYGLLQPIVIRKKPNALDRYII 80
Query: 92 IAGERRFRAAKMASLSEVPVI--IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+AGERR+RA+++ + + N D+ + ++EN++R L E A +
Sbjct: 81 VAGERRYRASQLLKARTIKAVLLETNPDDAELGYLQVIENIKRDALTTAELAD-FIAARI 139
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
T IG +G S+ + ++P S+RE++R +++
Sbjct: 140 AAKETAVSIGKKLGISKPQMTRYAAWAEMPESIRELVRLQKVP-------SIKIAYELYR 192
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
+ + + E + + K+I + + E++
Sbjct: 193 KWKETPEAVEAAISEAADDFEWTMAAVKRIGSAPEAEVVDIEA-EERFE 240
>gi|111038106|ref|YP_709193.1| KorB protein [IncP-1 plasmid pKJK5]
gi|110781111|emb|CAK02695.1| KorB protein [IncP-1 plasmid pKJK5]
Length = 347
Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 93/248 (37%), Gaps = 13/248 (5%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDL 66
G GL +L G++ ++ P+ + + + I +P+ PR F E + ++
Sbjct: 21 GMGLDSL-GDLAGLLNEPQAANTGV-AGPQDLPLELIDEDPNQPRKEDNPGFSPESIAEI 78
Query: 67 CQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
Q+IK G+ P+ VR G Y I G RRFR +K A + +P I + +
Sbjct: 79 GQTIKDRGVKSPISVRENPDAPGRYLINHGARRFRGSKWAEKTTIPGFI----DNDYNDD 134
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
V +++ E Y G + +I VGKS + + + +L LP + E
Sbjct: 135 DQVIENLQRNELTAREIADYIGRELAKGRKKGEIAKAVGKSAAFITQHVTLLDLPEPIAE 194
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ T+ + +V ++ + + K +G
Sbjct: 195 AFNSGRAKDVTVINELVTAYKKNPDEVGAWLADDSQELTRGSVKLLREF-LDDKRSQGEE 253
Query: 245 EKEKYLTD 252
E++ D
Sbjct: 254 ERDPNTVD 261
>gi|299541634|ref|ZP_07051975.1| putative stage 0 sporulation protein J [Lysinibacillus fusiformis
ZC1]
gi|298725837|gb|EFI66460.1| putative stage 0 sporulation protein J [Lysinibacillus fusiformis
ZC1]
Length = 82
Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E +S E+ + + E I I +I PN + PR F+ +E+L +I++HG+IQP
Sbjct: 19 SEFELQDESHEEIDKKVYEEIQEIPIVNITPNRYQPRTVFDDARIEELALTIRTHGLIQP 78
Query: 79 LIV 81
++V
Sbjct: 79 IVV 81
>gi|187729950|ref|YP_001853844.1| putative partition protein [Vibrio tapetis]
gi|182894509|gb|ACB99674.1| ParB-like partition protein [Vibrio tapetis]
Length = 324
Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 18/287 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MSN + AL+ ++S+ E ES I I + R +F+
Sbjct: 1 MSNKKDFK-------ALMKNKSKSLLDEEINEVKPGESVVLIPKEEIY-SSEQVRKFFDK 52
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
E + DL +++ G +QP++V D YKI GE R+RAA ++ + +
Sbjct: 53 EYIADLSKNMDDIGQLQPIVVTRKDIRGYKIQVGECRWRAANLSDKITHVECLVR--DAG 110
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGY-TQNDIGSIVGKSRSHVANILRILKLP 179
++ + EN+ R DL P E E L+ E G D+ ++V S S ++ + + P
Sbjct: 111 TVLAQLSENLHRSDLTPFETGAPLELLMEEQGIVENKDLANVVSLSESRISAFRKAAQCP 170
Query: 180 SSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV--SKKMSVRDTEELVQEQDNKKEKRK 237
+ I + + LS + +S ++ +ELV+ K+K K
Sbjct: 171 PYIELAYHNGIIRDVDTVNSLRIAGELSELETKKLLESPVSRKEAKELVKSLKASKKKAK 230
Query: 238 KIFEGSREKEKYLTDLEKK--ISSKVGLNIS---IKHRNNKGQFCIK 279
+ ++ + ++ +S +NN + +
Sbjct: 231 SKQADEEQSSPEHQEVTNETPLNEVTQTTVSGATPTPQNNGIRISFE 277
>gi|58616198|ref|YP_195327.1| hypothetical protein p1B79 [Azoarcus sp. EbN1]
gi|56315659|emb|CAI10303.1| hypothetical protein p1B79 [Aromatoleum aromaticum EbN1]
Length = 557
Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 97/170 (57%), Gaps = 3/170 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
+ I IV +NPR +F+ +E+L SI+ G+IQP++VR + +G Y+++AG RR+
Sbjct: 2 QTVQISEIVVG-NNPRKFFDPAEMEELTASIREKGVIQPILVRPLQDGGYQVVAGGRRYA 60
Query: 100 AAK--MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
AAK +PV+I+ +D+ + E+A++ENVQR D++P EEA ++++ ++D
Sbjct: 61 AAKAAHGDDYPMPVVIKELDDDEAEELALIENVQRADMSPAEEAEAAAKILARSEGDRDD 120
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+G SR+ + L ++ +VR + + I LGHA L P
Sbjct: 121 AARRLGWSRATLDKRLGLMNATDAVRTALAERRIKLGHAELLAGLPRPKQ 170
>gi|289661544|ref|ZP_06483125.1| parB-like partition protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 324
Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 10/181 (5%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+AL GE + + + + I + I +P PR F ++ L ++IK
Sbjct: 4 LSALNGEPDDQVTPVSE----PDGTPFRIKLADIERDPKQPRKRFTQADIDALAENIKER 59
Query: 74 GIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+ + V+ + I GE R+RA+K A + ++P I+ D + N
Sbjct: 60 GVKLAISVKTHPTKRGKWLINDGEVRWRASKQAGVEDIPTIV---DEDFDSFDQVNANEL 116
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R L+P++ A ++ + E G+ + I +GK + + +L ++ P+ V +
Sbjct: 117 RYALHPMDLAEFIKEKVGE-GFKKGVIAKRLGKPANAITELLALVDAPACVTDACMSGRC 175
Query: 192 S 192
+
Sbjct: 176 T 176
>gi|313667288|ref|YP_004049689.1| parB-like partition protein [Oceanithermus profundus DSM 14977]
gi|313153919|gb|ADR37769.1| parB-like partition protein [Oceanithermus profundus DSM 14977]
Length = 323
Score = 54.7 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL-I 80
+ P ++ ++ I + +I PNP PR F+ + LE L SI+ HG++QP+ +
Sbjct: 27 GAPKERPTPESLKGFKALSRIPVAAIEPNPEQPRVEFDEKELEQLATSIREHGLLQPISV 86
Query: 81 VRAIDNGLYKIIAGERRFRA 100
+ Y++IAGERR RA
Sbjct: 87 IELEPGQRYQLIAGERRLRA 106
>gi|17227492|ref|NP_478674.1| ParB family chromosome partitioning protein [Nostoc sp. PCC 7120]
gi|17134958|dbj|BAB77513.1| chromosome partitioning protein, ParB family [Nostoc sp. PCC 7120]
Length = 307
Score = 54.7 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ ++ + K + +S+ I+ PR YF+ + ++ L +S+K GI+QP
Sbjct: 11 ADRSKLKNVALFKEDDENLVPTKVSLDKIILPSSQPRRYFDPQAMQSLVESVKREGILQP 70
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
L+VR + + Y+++AGERR+RAA+ A+L+EVP+ R + ++ +++ A+ EN+QR DLNP+
Sbjct: 71 LLVRPVGDK-YELVAGERRYRAAQEAALTEVPITAREMSDEQAVQYALTENLQRSDLNPI 129
Query: 139 EEALGYEQ 146
EE G Q
Sbjct: 130 EETEGILQ 137
>gi|150004689|ref|YP_001299433.1| hypothetical protein BVU_2150 [Bacteroides vulgatus ATCC 8482]
gi|149933113|gb|ABR39811.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 644
Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/223 (23%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
++ + I ++ P+ N R F + L++L +SI+ GI+Q + VR G Y+II
Sbjct: 74 ATATAETDLDITTVHPSADNHRKTFNNASLQELAESIREVGILQAIAVRPHTAGGYEIIY 133
Query: 94 GERRFRAAKMASLSEVP-VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
GERR+RA+ +A + I N+ + + ++++ EN+QR+ + P EEA +++L+ +
Sbjct: 134 GERRYRASLLAGAKTIKATIYNNITDDEAEDMSLSENLQREQVRPTEEAKAFKRLLEKGR 193
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI 212
Y + S G+S ++ L++ +L + + E++ E I++ A + + +
Sbjct: 194 YDMYSLVSRFGRSEKYIYTRLKLNELYAPIGELLDNETITISVAEEISTYEANIQKDVY- 252
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
L + + ++ Y TDLE+
Sbjct: 253 ---------ENHLKSDNKDDWSGYTLNLFKKYFEKYYTTDLEQ 286
>gi|260437670|ref|ZP_05791486.1| spspoJ protein [Butyrivibrio crossotus DSM 2876]
gi|292810026|gb|EFF69231.1| spspoJ protein [Butyrivibrio crossotus DSM 2876]
Length = 301
Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 92/219 (42%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
I I I P++P + E ++ L SI+ +GI+ P+IVR +G Y++I+G R
Sbjct: 24 AGTQEIEIGRIHAFPNHPFKVLDDEKMDTLVDSIRENGILNPVIVRPDQSGNYEMISGHR 83
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R AAK+ L +VP I++ + + ++ + N+QR+++ P E A + +
Sbjct: 84 RLHAAKIVGLKKVPAIVKEMSDDEAIIKMVDANIQREEILPSERAFSLKMKMDAIKRQGK 143
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ +A + + S ++ R ++ L T + + V
Sbjct: 144 RSDLTSDHNGPKLAAVEVGQTVGISSTQVKRYIRLTELIPELLECTDNKKIGLVMAVDLS 203
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
++ V E + K + + + L+++ +
Sbjct: 204 YLDEQVQKWVYEYFKENGFLKPVQVEALKNYPNLSNVTQ 242
>gi|120610284|ref|YP_969962.1| parB-like partition protein [Acidovorax citrulli AAC00-1]
gi|120588748|gb|ABM32188.1| parB-like partition protein [Acidovorax citrulli AAC00-1]
Length = 864
Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 63/228 (27%), Positives = 110/228 (48%), Gaps = 27/228 (11%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + T +++ SIV + NPR F+ E L++L SIK+ G+ Q
Sbjct: 1 MATDQNDSVTVALPTPGAGPQMRMVAVSSIVASLTNPRKVFKQEPLQELADSIKASGVHQ 60
Query: 78 PLI---------------------------VRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
P++ + Y+++AGERR+RA ++A + E+P
Sbjct: 61 PILLRPLPAARVAETSRAARTSAPAWPFATTNKGEPIEYELVAGERRWRACQLADVGEIP 120
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
+IR++ + +LE+ ++EN+QR+D+ PLEEA GYE L+ + +G+ +GKSRS+V
Sbjct: 121 AMIRDLTDAQTLEVQVIENLQREDVTPLEEAEGYEVLMRTSELNADQVGAKIGKSRSYVY 180
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMS 218
L++L L S RE +R+ +I L D + + +
Sbjct: 181 ARLKVLDLCSQAREALREGKIDFSRGLLLARIPDEKLQLEALKFCTAT 228
>gi|119511590|ref|ZP_01630697.1| chromosome partitioning protein, ParB family protein [Nodularia
spumigena CCY9414]
gi|119463751|gb|EAW44681.1| chromosome partitioning protein, ParB family protein [Nodularia
spumigena CCY9414]
Length = 538
Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 78/133 (58%), Gaps = 4/133 (3%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
I + + +T P ++ + + I P PR YF+ + L +L S+K HGI+
Sbjct: 14 ITTPPPAPWLSPVEADTPPAAESKVKLQDIHLPPQQPRRYFDPQALTELIASVKQHGILH 73
Query: 78 PLIVRA----IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
PL+VR G Y+++AGERR+RAA A L EVPV++R + + + ++A++EN+QR+
Sbjct: 74 PLLVRPLTGGKTAGKYELVAGERRYRAATEAGLEEVPVVVRELSDDQAFQLALIENLQRQ 133
Query: 134 DLNPLEEALGYEQ 146
DLNP+EE G
Sbjct: 134 DLNPVEETEGILH 146
>gi|86159693|ref|YP_466478.1| ParB family protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85776204|gb|ABC83041.1| ParB family protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 369
Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 5/232 (2%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPH-NPRNYFESEGLEDLCQSIKSHGIIQPL 79
++ + + + + I P P R F+ E L L S++ G+ +P+
Sbjct: 38 AAEATKDAVLASILPGQQLRSVRLDLISPAPDGQARQQFDEERLLALADSLRRSGVREPI 97
Query: 80 IVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRNV--DNKSSLEIAIVENVQRKDL 135
IV + G ++I+AGERR+RAA++A L E+P II D + L EN+ R++L
Sbjct: 98 IVTPHGAEPGHFQIVAGERRWRAAQLAGLEEIPCIIDPKLVDRPTKLLAQAEENLHRENL 157
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
N +EEA QL+ + G ++G+S + + RI +++ + + E+
Sbjct: 158 NAVEEADVLAQLMGARDLDVREAGELIGRSYAQARRLYRIHMAIEPIKKALIRGELDARG 217
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
A + + L A V E + + + ++ + +
Sbjct: 218 AIEVDRVFNALEKAVGNEEALKRVDKLLERIVREKWPIRRIEQHAKKVAGGD 269
>gi|124262610|ref|YP_001023080.1| ParB, partition protein [Methylibium petroleiphilum PM1]
gi|124261856|gb|ABM96845.1| ParB, partition protein [Methylibium petroleiphilum PM1]
Length = 279
Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/278 (18%), Positives = 112/278 (40%), Gaps = 10/278 (3%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ Q++ + + I + + +P++ E E ++ L ++K +
Sbjct: 3 FSDDAQALTEENRALKEAEGRGKAIPLDFLDDSPYHI-GELEPERVKALEDNLKHNPQSS 61
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P++VR +G Y+++AG R RA + +EV +I+ VD++ +L I + +N +L+
Sbjct: 62 PVVVRLKADGRYELLAGRHRVRALRNLGRTEVEAVIKAVDDQQALRIVVYDNHITPNLSD 121
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
++ LG+E++ E T ++ G S + I+ KLP + +E+IR S G A
Sbjct: 122 YQKYLGFERIRQERELTVTELAEESGVSLPVLQKIMLFTKLPPAAQEVIRASHRSFG-AN 180
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ + V++ + + +L Q + + +++
Sbjct: 181 LFAGLAPLVDDYSDQVTEAVKLVAAGKLKQGAAVAWVTKPGTENAPEPVSVAVMSGKRRY 240
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ + G+ I + E I L E
Sbjct: 241 AEI---RV-----KKAGRLEIDFVRAEDASGIVKKLQE 270
>gi|188591851|ref|YP_001796449.1| plasmid partition protein [Cupriavidus taiwanensis LMG 19424]
gi|170938225|emb|CAP63210.1| plasmid partition protein [Cupriavidus taiwanensis LMG 19424]
Length = 338
Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 8/183 (4%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
GRG A+ E S + I + + NP N R ++ +++ SI
Sbjct: 46 GRG--AV--EAPLSFSAESHDDSAAGRQLIRIPLAQLHDNPLNARRIYDPAVVQERAASI 101
Query: 71 KSHGIIQPLIVRAIDNG--LYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAIV 127
+HG P + Y +I G R RA A L + ++ + ++ +
Sbjct: 102 ATHGQKTPGLAAPDPQRPGHYILIDGHYRKRALASAGKLDMECFVENDLSDLDFYRLSFM 161
Query: 128 ENVQRKDLNPLEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
N QR D + L+ A+ + + L + +I + G S V L +L+LP SV ++
Sbjct: 162 LNEQRSDQSALDNAIAWRQLLDEGKVQKEEEICELTGISAGTVNKTLALLRLPESVLAVM 221
Query: 187 RKE 189
R+
Sbjct: 222 REC 224
>gi|158340363|ref|YP_001521719.1| ParB family chromosome partitioning protein [Acaryochloris marina
MBIC11017]
gi|158310604|gb|ABW32218.1| chromosome partitioning protein, ParB family, putative
[Acaryochloris marina MBIC11017]
Length = 310
Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
I E + ++ E I + I PR YF+ ++DL SI +GI++
Sbjct: 10 ISEAKLAQKLDSEQIEDQRSG--NIPLTKISLPKQQPRRYFDPAKMQDLILSISKNGILE 67
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PL+VR + Y+++AGERR RAAK L EVP +IR +D+ +L++AI+EN+QR+DLNP
Sbjct: 68 PLLVRPLPRSKYELVAGERRLRAAKALKLKEVPAVIRKLDDDQALQLAIIENLQREDLNP 127
Query: 138 LEEALGYE 145
+EE
Sbjct: 128 VEETEAII 135
>gi|291530012|emb|CBK95597.1| ParB-like partition proteins [Eubacterium siraeum 70/3]
Length = 317
Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/230 (18%), Positives = 81/230 (35%), Gaps = 2/230 (0%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
++ S E++ E I + I P +P E E + L +SIK G+I P V
Sbjct: 16 DELFSSQEERDEAKLSKIRDIPLEEIDDFPDHPFKVREDEDMFQLVESIKERGVITPATV 75
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
R ++G Y++I+G RR RA ++A + + ++D + + + N QR + P E+A
Sbjct: 76 RQKEDGRYELISGHRRKRACELAGFETLRCEVVDLDRDEATILMVESNFQRSQILPSEKA 135
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
Y+ + + L L S R + LV
Sbjct: 136 HAYKMRLDAMKRQAGRPRKENSSPVGIDLRGKQSLDLMSEECGDSRNQIHRYIRLTNLVP 195
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
K + L ++ + + + ++ +
Sbjct: 196 ELLEFV--DEGRIKMRPAVELSYLNEDCQRDLVDEIDLNDCTPSHDQAIR 243
>gi|295099205|emb|CBK88294.1| ParB-like partition proteins [Eubacterium cylindroides T2-87]
Length = 323
Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 7/147 (4%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ + GL + V+ + E++ E E +S I P++P
Sbjct: 1 MAKSN-------GLNFNLPSVDDLFSTEEERAEARLEKVVNLSPTEISDFPNHPFKVRMD 53
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
++++ +S+K +G++ P +VR G Y+++AG RR +AA +A L+++P I+R + +
Sbjct: 54 AAMQEMTESVKQYGVLVPALVRPKPEGGYEMVAGHRRKKAADLAGLAKIPCIVRQLTDDE 113
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQL 147
+ I + N+QR+ + P E+A Y+
Sbjct: 114 ATIIMVDSNLQREQILPSEKAFAYKMK 140
>gi|326392670|ref|ZP_08213983.1| ParB-like partition protein [Thermoanaerobacter ethanolicus JW 200]
gi|325991288|gb|EGD49967.1| ParB-like partition protein [Thermoanaerobacter ethanolicus JW 200]
Length = 51
Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 249 YLTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
++ ++E + S +G + I R ++G I+Y + E L I ++
Sbjct: 2 HVKEIEDNLCSFLGTKVKISQRSKDRGIIQIEYYSEEDLTRIIEII 47
>gi|292557967|gb|ADE30968.1| Chromosome partitioning protein parB [Streptococcus suis GZ1]
Length = 314
Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 63/141 (44%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +++ + E++ E I + I P +P + E + L +SIK G+I
Sbjct: 10 LTKLDDLFSTQEQRDEEKLSKIRDIPLTEIDDFPDHPFKVRDDEDMAQLIESIKERGVIT 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++I+G RR RA ++A + + ++ + + + N QR + P
Sbjct: 70 PATVRQKEDGRYELISGHRRKRACELAGFDTLRCEVVELNRDEATILMVESNYQRSQILP 129
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E+A Y+ +
Sbjct: 130 SEKAYAYKMRLEAMKRQGERT 150
>gi|317489200|ref|ZP_07947718.1| ParB-like partition protein [Eggerthella sp. 1_3_56FAA]
gi|325832305|ref|ZP_08165304.1| ParB-like protein [Eggerthella sp. HGA1]
gi|316911708|gb|EFV33299.1| ParB-like partition protein [Eggerthella sp. 1_3_56FAA]
gi|325486141|gb|EGC88595.1| ParB-like protein [Eggerthella sp. HGA1]
Length = 312
Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ ++ + ++ E E I ++ I P P +P + + L D+ +S+ G++
Sbjct: 11 LPSLDDLFTTQAERDEVGCEKVGVIPLYMIDPFPDHPFRV-DDDALRDMAESVSRFGVLV 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P +VR +NG Y++++G RR RAA+MA L +P ++R + ++ + N+QR+++ P
Sbjct: 70 PALVRPKENGRYEMVSGHRRKRAAEMAGLEALPAVVREMTYDEAVIAMVDANIQRENVLP 129
Query: 138 LEEALGYEQL 147
E+A Y+
Sbjct: 130 SEKAFAYKMK 139
>gi|170690926|ref|ZP_02882092.1| parB-like partition protein [Burkholderia graminis C4D1M]
gi|170144175|gb|EDT12337.1| parB-like partition protein [Burkholderia graminis C4D1M]
Length = 352
Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 60/315 (19%), Positives = 126/315 (40%), Gaps = 24/315 (7%)
Query: 3 NNYSKRRLG--RGLAALIGEVNQSIDSPEKKTETI------------PESQDCISIHSIV 48
NN SK + G R L+++I + +D+ + + E+ P +++ +I
Sbjct: 37 NNVSKSQDGTARTLSSVIPQAQTDLDTVDTENESAAYRAWRMEHGYRPGQVIELALKTIK 96
Query: 49 PNPHNPRNYFESEGLEDLCQSIKSHGIIQPL--IVRAIDNGLYKIIAGERRFRAAKMASL 106
P+P NPR+++ + +L ++ G Q + I + G Y + G RR RA K A+
Sbjct: 97 PSPFNPRHFYLKSSIAELAVNLAKQGQQQAIHVIPDYDNPGTYFVSDGGRRVRALKEANK 156
Query: 107 SEVPVIIRNVD-NKSSLEIAIVENVQRKDLNPLEEALGYEQL-ISEYGYTQNDIGSIVGK 164
V I+ ++ S ++ NVQR + A+ +++ + +Q ++ +G
Sbjct: 157 ESVKAIVIDLPIGIQSYKLGYDLNVQRDSQTVFDNAVVWKRFLEDRHFQSQKELAEHLGL 216
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
S VA L I KLP +V + G + + ++ +++
Sbjct: 217 DESTVAVALSIAKLPEAVMHEMVARPDRFGSNMAYQVGRYHTARGADATLRLINKIISDD 276
Query: 225 LVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKG--QFCIKYET 282
L Q K + + S K +++ K+ +S+ + G + ++ +
Sbjct: 277 LSTRQVADIVKGRATTQES-TKPAGRQRYAQRLEIKLD-GVSVGDLKSYGDDRIELRLKG 334
Query: 283 N--EQLKIICSLLGE 295
E+ I + +
Sbjct: 335 LTREKRDDILRQIEK 349
>gi|295102563|emb|CBL00108.1| ParB-like partition proteins [Faecalibacterium prausnitzii L2-6]
Length = 297
Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 8/137 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
+GL L + EK+ E E I I ++ P ++P + E + +SI
Sbjct: 11 KGLDDLFS-------TEEKRQEEQREQVQQIPIDALHPFTNHPFKVLDDEAMTRTVESIA 63
Query: 72 SHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+G++ PLI R +G Y+II+G RR AAK+A L +PVI+R + + +++ + + N+
Sbjct: 64 QYGVLAPLIARPRPDGDGYEIISGHRRQYAAKLAGLDTLPVIVRQMSDDAAVILMVDSNL 123
Query: 131 QRKDLNPLEEALGYEQL 147
QR+ + P E A Y+
Sbjct: 124 QREHILPSERAFAYKMK 140
>gi|282901884|ref|ZP_06309787.1| Chromosome partitioning protein, ParB family [Cylindrospermopsis
raciborskii CS-505]
gi|281193222|gb|EFA68216.1| Chromosome partitioning protein, ParB family [Cylindrospermopsis
raciborskii CS-505]
Length = 385
Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
I + I NP PR F SE +E + +S+ S G ++P+I+ + I
Sbjct: 59 QSQSGIQYIPLEKIQANPEQPRQTFLSESIESMSRSLVSDGQLEPIILIQRE--HLVIFD 116
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
GERR+R+AK + +I + A++ ++ R+DLNPL++A
Sbjct: 117 GERRWRSAKHLGWQNLQAVIIPEPDA-LHRKALITSLHREDLNPLDKAEAI 166
>gi|330825339|ref|YP_004388642.1| PRTRC system ParB family protein [Alicycliphilus denitrificans
K601]
gi|329310711|gb|AEB85126.1| PRTRC system ParB family protein [Alicycliphilus denitrificans
K601]
Length = 597
Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 4/179 (2%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID-NGLYK 90
T+T SQ + I IV NPR YF+ + + +L + I++ G+++P++VR I Y+
Sbjct: 2 TDTPHPSQPTLPIRRIVQGR-NPRTYFDPDKMAELEEGIRAVGVLEPIVVRPIPGTDRYE 60
Query: 91 IIAGERRFRAAKMA--SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
IIAGERR+RAA+ ++PV+I++ ++++ ++++EN R+D++P EEA ++ +
Sbjct: 61 IIAGERRWRAARNVFGDGYDMPVVIKDASDETAEAMSVIENYHREDMSPAEEAHAAQRQL 120
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + ++G S + L +L +V + + I LGHA L
Sbjct: 121 LRQRGDKEETARLMGWSPDVLERRLALLACTPAVLQALTSRTILLGHAELLSGIPPDKQ 179
>gi|218281953|ref|ZP_03488271.1| hypothetical protein EUBIFOR_00840 [Eubacterium biforme DSM 3989]
gi|218217009|gb|EEC90547.1| hypothetical protein EUBIFOR_00840 [Eubacterium biforme DSM 3989]
Length = 329
Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 65/141 (46%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E++ E E I I I +P + E + L SIK + ++
Sbjct: 11 LPSYDSLFSTEEERQEANSEKVMTIPIDKITDFKGHPFHVTMDEDMAKLIDSIKENDMLM 70
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P +VR +G Y++I+G RR A E+ VIIR++D+ + + + N+QR+++ P
Sbjct: 71 PALVRPKKDGSYEMISGHRRKFALSQLGRKEMNVIIRDLDDDQATILMVDSNIQRENIYP 130
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E Y+ + + +
Sbjct: 131 SERGYAYKMRLEAMKHQGKRV 151
>gi|186687050|ref|YP_001870193.1| parB-like partition protein [Nostoc punctiforme PCC 73102]
gi|186469353|gb|ACC85152.1| parB-like partition protein [Nostoc punctiforme PCC 73102]
Length = 374
Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L AL ++ + ++ T+ Q I I I PNP PR F ++ + + ++++
Sbjct: 35 LRALQAPELEAQIAALREQLTMQSGQQEIDITLICPNPEQPRKTFSAQSINSMARTLEKD 94
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G +QP+I+ +G + + GERR+RA + + ++ + A++ + R+
Sbjct: 95 GQLQPVILITQGSG-FDLFDGERRWRAGMQLNWKTLKSVVMPRP-QDLHRKALLTTLYRE 152
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
DLNPL++A + ISE + + +
Sbjct: 153 DLNPLDKAEALLKEISEQTEVNLAEAPRILATAVRRLEYQK 193
>gi|226321064|ref|ZP_03796606.1| stage 0 sporulation protein J [Borrelia burgdorferi 29805]
gi|226233474|gb|EEH32213.1| stage 0 sporulation protein J [Borrelia burgdorferi 29805]
Length = 186
Score = 53.9 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I IH + + PR LE+L SIK +GI+QPLIV ++ I+ GERRFR
Sbjct: 6 KMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIV-GERRFR 64
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
AAK+ L+ +PVI ++ + +VEN+QR++ P+EEA Y+ ++++Y TQ D+
Sbjct: 65 AAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENFTPVEEAYAYKNIMNKYSLTQKDLS 124
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI 212
+GKSR++++N++RIL L + I ++EIS GHA+ ++S D +
Sbjct: 125 EKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGHAKVILSLKDRQDRYNLY 177
>gi|170697429|ref|ZP_02888520.1| parB-like partition protein [Burkholderia ambifaria IOP40-10]
gi|170137608|gb|EDT05845.1| parB-like partition protein [Burkholderia ambifaria IOP40-10]
Length = 321
Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 98/266 (36%), Gaps = 9/266 (3%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + S + + + I I NP NPR + + + ++ S+ + G I
Sbjct: 43 TAREVGSSQDSVKYEVGQVYDVPIGKIRSNPFNPRVVYTASAVSEMAASLVARGQGMSAI 102
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLS--EVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
A G +I GE R R A+ A LS + + + ++ E A NV+R+D +PL
Sbjct: 103 GYANGEGEVVLIEGETRLRGARAAGLSTLRLEIRPKPASDRELYEEARAANVERRDQSPL 162
Query: 139 EEALGYEQLISEYGYTQN-DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
++A+ +++LI + Y + + HV+ + + +LPS V + + L
Sbjct: 163 DDAIKWKELIGKKIYPTQAALAKALNLGEDHVSRTMSLAQLPSKVVHAVAEYPELLSLKM 222
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ +S + + K R + +++
Sbjct: 223 LNAIREFWEVKGEEETLALISEAAKSGMGYRDVAARRKAAAKGTVKRPRSTR-----EQL 277
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETN 283
+ + G K G+ +K +
Sbjct: 278 TFR-GAKGEFKSFEEDGRIELKLKGL 302
>gi|295090258|emb|CBK76365.1| ParB-like partition proteins [Clostridium cf. saccharolyticum K10]
Length = 314
Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 64/137 (46%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +++ + E++ E I + I P +P + E + L +SIK G+I
Sbjct: 10 LTKLDDLFSTQEQRDEEKLSKIRDIPLTEIDDFPDHPFKVRDDEDMAQLIESIKERGVIT 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++I+G RR RA ++A + + +++ + + + N QR + P
Sbjct: 70 PATVRQKEDGRYELISGHRRKRACELAGFDTLRCEVVDLNRDEATILMVESNYQRSQILP 129
Query: 138 LEEALGYEQLISEYGYT 154
E+A Y+ +
Sbjct: 130 SEKAFAYKMRLDAMKRQ 146
>gi|288959397|ref|YP_003449738.1| chromosome partitioning protein [Azospirillum sp. B510]
gi|288911705|dbj|BAI73194.1| chromosome partitioning protein [Azospirillum sp. B510]
Length = 695
Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ E+ ++P + I P+P NPR + EG+ L SI++ G++Q
Sbjct: 63 LAELAGEEEAPSAAAPVGAVGLRLFRLMDIKPSPLNPRKTCDPEGIASLAASIEAQGLMQ 122
Query: 78 PLIVRAIDN--GLYKIIAGERRFRAAKMA--------SLSEVPVIIRNVDNKSSLEIAIV 127
L++R D Y+I+AGERRFRA ++ +P + + D+ L IA++
Sbjct: 123 NLVLRRSDEAGVAYQIVAGERRFRALRLLAEQGKWNPEEPNIPGNLIDADDAKHLAIALL 182
Query: 128 ENVQRKDLNPLEEA--LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
EN+QR D+N +EEA + ++ I +G ++ H+ L +L +
Sbjct: 183 ENLQRHDVNAMEEAEGFAQLIALDPSQWSTKSIADSIGCTQRHIQQRLALLDKLGDEAQT 242
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ +++ + P A+++ +
Sbjct: 243 ALRDGKITFSQARVLTMAAPAEQAKLVKNP 272
>gi|189219200|ref|YP_001939841.1| Chromosome (plasmid) partitioning protein, ParB/Spo0J, contains
ParB-like nuclease domain [Methylacidiphilum infernorum
V4]
gi|189186058|gb|ACD83243.1| Chromosome (plasmid) partitioning protein, ParB/Spo0J, contains
ParB-like nuclease domain [Methylacidiphilum infernorum
V4]
Length = 525
Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 115/201 (57%), Gaps = 4/201 (1%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+++ S I I IV + NPR + E +E+L SIK G++ P++VR N Y+
Sbjct: 5 RSQKQASSFSLIPIDKIVLSDSNPRKEIKEEHIEELATSIKEIGLLHPILVRPTVNNSYE 64
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
II GERR+RA K + + I +D+K +L++ I+EN+QR++LNP+EEA GY++L+ E
Sbjct: 65 IICGERRWRACKKLNREFIECFIHPMDDKLALQVRIIENIQRQNLNPIEEAQGYKKLLDE 124
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL---GHARTLVSTSDPLS 207
G + ++ S++GK R +++ + +L LP + +E I ++S + +
Sbjct: 125 -GMSIIELASVIGKGRDYISRMTMLLSLPEAAKEAIIAGKLSRRAGWYISRIPVPKLRAI 183
Query: 208 LAQVIVSKKMSVRDTEELVQE 228
+A ++K ++V ++V E
Sbjct: 184 VASEAIAKSLTVNQVAQIVLE 204
>gi|325274939|ref|ZP_08140944.1| parB-like partition protein [Pseudomonas sp. TJI-51]
gi|324099937|gb|EGB97778.1| parB-like partition protein [Pseudomonas sp. TJI-51]
Length = 349
Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 87/234 (37%), Gaps = 7/234 (2%)
Query: 19 GEVNQSIDSP-EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
GE + +P E + E + + P+P+ PR F L+ L +I+++G +
Sbjct: 67 GEKSVGPAAPLEGQYLPAKEGVTLLDTDMVDPSPYQPRKIFNEVALQLLADAIQANGGLN 126
Query: 78 PLIVRAIDNGLYKIIA-GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
IV + GERR+RA + +++ +R++ ++ + +A+ +N ++ L
Sbjct: 127 NPIVVRPKANGRFELVGGERRWRAHDILQWTKIEAYVRDLSDEDAAVLAVTDNESQEPLT 186
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
E AL Y++L+ S ++ I + + + +
Sbjct: 187 DFERALSYKKLLDSKAVKNQMTLSR-----RVGRSMATISRCLAYFKLPQETLTLLEDDP 241
Query: 197 RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
+ + A K V +LV + +E + S K L
Sbjct: 242 AFIGTKHVADLAALADEGHKDLVVQATQLVFDGKLSQEAAVAWIKSSVRKSSDL 295
>gi|56550615|ref|YP_161681.1| putative chromosome partitioning protein ParB [Cupriavidus
metallidurans CH34]
gi|56410321|emb|CAI30203.1| putative chromosome partitioning protein ParB [Cupriavidus
metallidurans CH34]
Length = 594
Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
G T + + I P NPR YF+ + +L +S++ +G++Q
Sbjct: 16 GTTFPVRQRVPHFARTQKMQTPTVVVGKIRPGR-NPRKYFDPAEMAELTESVRVNGVLQS 74
Query: 79 LIVRAIDN----GLYKIIAGERRFRAA--KMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
L++R ++ Y+++AGERR+RAA VPVII+ + + + A++EN+QR
Sbjct: 75 LLIRPVEEDESGREYEVVAGERRYRAALSAHGEDYPVPVIIKAMTDAEADSFALIENIQR 134
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
D+ P EEA+ +++ +++ +G SRS + L ++ SV E + I
Sbjct: 135 ADMAPSEEAVQAAKIVGWLQGDRDEAARQLGWSRSTLDKRLALMNCSESVLEALNTRTIQ 194
Query: 193 LGHARTLVS 201
LGHA L +
Sbjct: 195 LGHAELLAT 203
>gi|254426400|ref|ZP_05040116.1| ParB-like nuclease domain family [Synechococcus sp. PCC 7335]
gi|196187814|gb|EDX82780.1| ParB-like nuclease domain family [Synechococcus sp. PCC 7335]
Length = 319
Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNP-----HNPRNYFESEGLEDLCQSIKSH 73
GE + + +++ E + + I P PR YF+ + +E L QSI+ H
Sbjct: 14 GETITQLKEEIESLKSLSEQSFKLPVDDIQPLQLPGKLKQPRLYFDPQKMERLKQSIQKH 73
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
G+++P++VR G Y+II+GERR+R+ + + ++P I+R++ + +LE A++ ++ +
Sbjct: 74 GVLEPILVRPSAKGRYEIISGERRWRSCRALEMEDIPAIVRDMSDAIALEAALIAHLLNE 133
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIV 162
++ P+E+ L+S + +
Sbjct: 134 EITPVEQTESILNLLSLHLNMPIEEVKAN 162
>gi|121583424|ref|YP_973855.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
gi|120596678|gb|ABM40113.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
Length = 368
Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
++ S P + + I +P PR F+ E L+ + +SI +HG++QP++
Sbjct: 30 AEATLASLRAAGSAAPGEALRLPLADIDEDPDQPRTVFDDEELQSMARSILAHGVVQPIV 89
Query: 81 VRAIDNGLYKIIAGERRFRAAK 102
VR NG Y + G RR RA++
Sbjct: 90 VRPPVNGRYVLAFGARRLRASR 111
>gi|294643674|ref|ZP_06721475.1| ParB-like protein [Bacteroides ovatus SD CC 2a]
gi|294808505|ref|ZP_06767255.1| ParB-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|292640976|gb|EFF59193.1| ParB-like protein [Bacteroides ovatus SD CC 2a]
gi|294444295|gb|EFG13012.1| ParB-like protein [Bacteroides xylanisolvens SD CC 1b]
Length = 651
Score = 53.5 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 98/203 (48%), Gaps = 1/203 (0%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ K ++ + I ++ P+ N R F+ L++L +SI+ GI+Q +
Sbjct: 67 TEEAPQQAVFKTPLATATAETDLDITTVHPSADNHRKTFKDASLQELAESIREVGILQAI 126
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPL 138
VR G Y+II GERR+RA+ +A + I N + + ++++ EN+QR+ + P
Sbjct: 127 AVRPRTEGSYEIIYGERRYRASLLAGAKTIKATIYNNVTDDEAEDMSLSENLQREQVRPT 186
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EEA +++L+ + Y + + G+S ++ L++ +L + + E++ E I++ A
Sbjct: 187 EEAKAFKRLLEKGRYDMYSLTARFGRSEKYIYTRLKLNELYAPIGELLDNETITVSIAEE 246
Query: 199 LVSTSDPLSLAQVIVSKKMSVRD 221
+ + + K +
Sbjct: 247 ISTYEPDIQKDVYEKHLKEGNGE 269
>gi|257457458|ref|ZP_05622627.1| ParB family protein [Treponema vincentii ATCC 35580]
gi|257445141|gb|EEV20215.1| ParB family protein [Treponema vincentii ATCC 35580]
Length = 77
Score = 53.5 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 7/73 (9%)
Query: 228 EQDNKKEKRKKIFEGSREKEK-------YLTDLEKKISSKVGLNISIKHRNNKGQFCIKY 280
+ +K K+ + D+E++ +G + IK KG I Y
Sbjct: 2 QLKTGGRAGQKKPAPQPVKQPGADDAQLAVKDIEQQFIDALGTKVEIKGNLEKGIVYISY 61
Query: 281 ETNEQLKIICSLL 293
+ L + + +
Sbjct: 62 FSQADLDALYNKI 74
>gi|294010426|ref|YP_003543886.1| ParB-like protein [Sphingobium japonicum UT26S]
gi|292673756|dbj|BAI95274.1| ParB-like protein [Sphingobium japonicum UT26S]
Length = 315
Score = 53.5 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA-GER 96
+ I + I+P+P NPR F+ + L +L SI S G++QP+ V D I GER
Sbjct: 23 RVEDIELARILPDPGNPRRSFDDDALAELASSIASRGVLQPITVTPPDANGMHRIRLGER 82
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRA+++A L+ +P I+ V L + ++ E + + G Q
Sbjct: 83 RFRASQLAGLATIPAIVVPVGEGVQLLADQIVENDQRANLSSVELAHAIARMLKGGMNQV 142
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVRE 184
+I + +G+S+ V+ +P+ ++E
Sbjct: 143 EIAAALGRSKQFVSLYAAYGDMPAYLKE 170
>gi|241589883|ref|YP_002979908.1| parB-like partition protein [Ralstonia pickettii 12D]
gi|240868595|gb|ACS66254.1| parB-like partition protein [Ralstonia pickettii 12D]
Length = 591
Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 6/191 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCI--SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
G + + E K E P++ + I I I+ +NPR YFE + + +L SI++ GI+
Sbjct: 19 GVLVPEDKAQEAKWELAPDNGNLIYARIGDILV-VYNPRQYFEPKAMAELVISIRAQGIL 77
Query: 77 QPLIVRAIDNGLYKIIAGERRFRAA--KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
QPL+VR D +++IAGERR R A +PV R + + + A EN+QR+
Sbjct: 78 QPLLVRPKDGR-FELIAGERRLRGALEAYGPDGVIPVYSREMTDAEAAAAAAAENIQREG 136
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
++ EE+ + YG +N++ +G S + + L + +V+E + + +ISLG
Sbjct: 137 MSATEESGAAVTAMGLYGGDRNEVAKRLGWSMPKLESRLALQNCTPTVQEALNERKISLG 196
Query: 195 HARTLVSTSDP 205
HA L +
Sbjct: 197 HAELLAAVPKN 207
>gi|38637973|ref|NP_942947.1| putative partitioning protein [Ralstonia eutropha H16]
gi|32527311|gb|AAP86061.1| putative partitioning protein [Ralstonia eutropha H16]
Length = 560
Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 44 IHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID----NGLYKIIAGERRFR 99
I I P NPR YF+ + +L +SI+ GI+QP+++R ++ Y+++AGERR+R
Sbjct: 8 IGKIRPGR-NPRKYFDPVQMAELTESIRVDGILQPILIRPVEGDENGHEYEVVAGERRYR 66
Query: 100 A--AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
A A +PV ++ + + + +A++ENVQR D+ P EEA+ ++ + +++
Sbjct: 67 AALAAHGEGYHIPVTLKVITDAEADRMALIENVQRADMAPSEEAVAASRIAGQLQGDRDE 126
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
++G SRS + L ++ SV + I LGHA L +
Sbjct: 127 AARLLGWSRSTLDKRLALMNCSESVLNALNTRVIQLGHAELLAT 170
>gi|37522920|ref|NP_926297.1| ParB family chromosome partitioning protein [Gloeobacter violaceus
PCC 7421]
gi|35213922|dbj|BAC91292.1| ParB family chromosome partitioning protein [Gloeobacter violaceus
PCC 7421]
Length = 301
Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 6/229 (2%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
+ + IV PR +F+S + +L +SI+ GI+QPL+VR + NG Y+++AGERRFRAA
Sbjct: 29 LRLDEIVVCCSQPRRFFDSAAMGELIESIRRVGILQPLLVRPLANGKYELVAGERRFRAA 88
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ----LISEYGYTQND 157
+ L VPV+IR + + ++E A+VEN+QR+ LNPLEE Q + +
Sbjct: 89 RAVGLEAVPVVIRQLSDTEAVEQALVENLQRESLNPLEETESILQLLALKLGKSEEQTVS 148
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKE--EISLGHARTLVSTSDPLSLAQVIVSK 215
+ + + I + E + +++ + +
Sbjct: 149 LLYRLQNASRKKTTHNVIGSTEAQTVEAVFASVGKMTCESFVNNRLPLRNMPHDVFKALR 208
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLN 264
+ + T+ V Q + +R+ + + S +++ L+ L + I + G
Sbjct: 209 EGRLAYTKARVLAQVKDRTQREMLLKESLQRDLSLSQLRQLIKTTCGAP 257
>gi|24217088|ref|NP_714571.1| ParB protein [Leptospira interrogans serovar Lai str. 56601]
gi|45655604|ref|YP_003413.1| hypothetical protein LIC20021 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24202114|gb|AAN51586.1| ParB-like protein [Leptospira interrogans serovar Lai str. 56601]
gi|45602575|gb|AAS72050.1| ParB [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
Length = 235
Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 2/216 (0%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
S+ I + IVPNP PR F E + DL +S+K G+I+P++VR Y+I+A
Sbjct: 18 EKESSKLEIQLSDIVPNPSQPR-VFGKEEVSDLVESMKRLGLIEPIVVRKSGKK-YQIVA 75
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
GERR++AAK+ + +P I + E+A+ EN +RK LNP E + L E
Sbjct: 76 GERRYQAAKILKWNTIPAIETSASEDKCFEMALAENEKRKSLNPWEVGRAIQFLRKEKKK 135
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
T ++ I+G + +V + I +L + K I+
Sbjct: 136 TAEEVSKILGFTERYVKQLSSIARLDQKSVGDLIKSGKDTSVKNLEALLKQKEGRGGEII 195
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
S + ++ L + + +++ K + E S K+KY
Sbjct: 196 SSRKLIQSKIVLQIGKLSLQQREKFLKELSSLKKKY 231
>gi|94152648|ref|YP_582050.1| ParB family protein [Cupriavidus metallidurans CH34]
gi|93359014|gb|ABF13100.1| ParB: chromosome partitioning protein [Cupriavidus metallidurans
CH34]
Length = 574
Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN----G 87
T + + I P NPR YF+ + +L +S++ +G++Q L++R ++
Sbjct: 9 ARTQKMQTPTVVVGKIRPGR-NPRKYFDPAEMAELTESVRVNGVLQSLLIRPVEEDESGR 67
Query: 88 LYKIIAGERRFRAA--KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
Y+++AGERR+RAA VPVII+ + + + A++EN+QR D+ P EEA+
Sbjct: 68 EYEVVAGERRYRAALSAHGEDYPVPVIIKAMTDAEADSFALIENIQRADMAPSEEAVQAA 127
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+++ +++ +G SRS + L ++ SV E + I LGHA L +
Sbjct: 128 KIVGWLQGDRDEAARQLGWSRSTLDKRLALMNCSESVLEALNTRTIQLGHAELLAT 183
>gi|319935373|ref|ZP_08009810.1| chromosome partitioning protein parB [Coprobacillus sp. 29_1]
gi|319809589|gb|EFW06002.1| chromosome partitioning protein parB [Coprobacillus sp. 29_1]
Length = 317
Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 90/229 (39%), Gaps = 2/229 (0%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + S + K E E I + I P++P E + + +L +SI G++ P
Sbjct: 17 DEDILFKSEKTKQEDNAEKIINIPLDEITDFPNHPFKIREDKAMVELSESIAKVGVLMPA 76
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+VR ++G Y++IAG RR A++ A++ +P I+RN+ + + I + N+++++
Sbjct: 77 LVRPKEDGGYEMIAGHRRKFASQYANIETMPCIVRNLSDDEATIIMVDTNLRQRENLLPS 136
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
E ++ + Q + ++ + K + RE +R+ +
Sbjct: 137 EKAFAYKMKLDAMKRQGLRTDLTSTPLVEKLSVAELGKEYNESRETVRRYIRLTELIPQI 196
Query: 200 VSTSDPLSLA--QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ D +A + + E L+ K
Sbjct: 197 LDMVDNDLIALRPAVEISFLDESHQEYLLDVMQQNDCTPSHAQTLKMHK 245
>gi|291551197|emb|CBL27459.1| ParB-like partition proteins [Ruminococcus torques L2-14]
Length = 310
Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 64/141 (45%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +++ + ++ E I + I P +P + E + L +S+K G+I
Sbjct: 10 LTKLDDLFTTQAQRDEEQLSKIRDIPLELIDDFPDHPFKVRDDEDMMQLVESVKERGVIT 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++++G RR RA ++A + I +++ + + + N QR ++ P
Sbjct: 70 PATVRQKEDGRYELVSGHRRKRACELAGFETLRSEIVDLNRDEATILMVESNFQRSEILP 129
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E+A Y+ +
Sbjct: 130 SEKAFAYKMRLEAMKRQGERT 150
>gi|253578099|ref|ZP_04855371.1| chromosome partitioning protein parB [Ruminococcus sp. 5_1_39B_FAA]
gi|251850417|gb|EES78375.1| chromosome partitioning protein parB [Ruminococcus sp. 5_1_39BFAA]
Length = 315
Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 64/143 (44%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E + E I I I P +P E +E L +SIK +G++
Sbjct: 11 LTAYDDLFQTDESREEAKLSKIRDIPISEIDEFPDHPFKVLMDEDMEQLVESIKRNGVMT 70
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++I+G RR +A ++A L + ++ + ++ + + N+QR + P
Sbjct: 71 PATVRLKEDGRYELISGHRRKKACELAGLETLKCEVKELTRDEAIIVMVESNLQRSVILP 130
Query: 138 LEEALGYEQLISEYGYTQNDIGS 160
E+A Y+ +
Sbjct: 131 SEKAFAYKMRLEAMKRQAGRPPK 153
>gi|126658755|ref|ZP_01729900.1| ParB-like partition protein [Cyanothece sp. CCY0110]
gi|126620017|gb|EAZ90741.1| ParB-like partition protein [Cyanothece sp. CCY0110]
Length = 304
Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + + I I PR YF+ E LE L SI+ GII+PL+VR + + ++AG
Sbjct: 9 STEPETDLPIELISLETSQPRRYFDPEKLEQLADSIRKFGIIEPLLVRQKGSSYF-LVAG 67
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
ERR+RAAKMA L VPV++R + ++ + +A+VEN+ R+DLNP+EE G
Sbjct: 68 ERRYRAAKMAELKTVPVVVRELSDEEAFAVALVENLVREDLNPVEETEGILC 119
>gi|297567738|ref|YP_003686709.1| hypothetical protein Mesil_3389 [Meiothermus silvanus DSM 9946]
gi|296852187|gb|ADH65201.1| hypothetical protein Mesil_3389 [Meiothermus silvanus DSM 9946]
Length = 296
Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 25/266 (9%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+G +++ + E ++ + + ++ P P PR F E LE L SIK G++Q
Sbjct: 1 MGTMDKMFQQAQGLLEAPLPTESTLPLSALSPTP-QPRRRF--ENLEKLAASIKERGVLQ 57
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PL+VR +G I AGERR+RAA++A L+EVPV+I VD ++ IA+ EN+QR+DLNP
Sbjct: 58 PLLVRPTKDGYAII-AGERRYRAAQIAGLTEVPVVILEVDEPTAQRIALAENLQREDLNP 116
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
EE LG L+ + + + ++ + + + + +R
Sbjct: 117 YEETLGILSLLEIRLNKGREEV------------LGLLHRMRNEAKGRVTHNVMGNSESR 164
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDT---EELVQEQDNKKEKRKKIFEGSREKEKY----- 249
+ T L + + ++L + E + K+
Sbjct: 165 VVEETFQALGRLTWESFVQNRLPLLNLPQDLQSALEEGSVPYTAALELRKVKDPQMRTEL 224
Query: 250 LTDLEKKISSKVGLNISIKHRNNKGQ 275
L +++ +S + L IK +G+
Sbjct: 225 LEAVQQGLSLR-DLKERIKKALKQGR 249
>gi|309810375|ref|ZP_07704210.1| ParB-like protein [Dermacoccus sp. Ellin185]
gi|308435688|gb|EFP59485.1| ParB-like protein [Dermacoccus sp. Ellin185]
Length = 399
Score = 53.1 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
V+ + ++ + +++ +VPN NPR F + L+ L SI G++ P+
Sbjct: 66 SVSSEQEEQAAPSQNVTAELRELNVADVVPNRRNPRLDFPQDELDRLTDSIDLEGVLVPI 125
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPV-IIRNVDNKSSLEIAIVENVQRKDLNPL 138
+V D ++ GERRFR A+ ++P I ++ L+ ++ R+ +
Sbjct: 126 VVYPKDGEYV-LVDGERRFRCARDLGHVKIPALITTERSDREMLQQMFNIHLIREPWRDI 184
Query: 139 EEALGYEQ 146
A ++
Sbjct: 185 PTARALQR 192
>gi|302393070|ref|YP_003828890.1| parB-like partition protein [Acetohalobium arabaticum DSM 5501]
gi|302205147|gb|ADL13825.1| parB-like partition protein [Acetohalobium arabaticum DSM 5501]
Length = 290
Score = 53.1 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 126/234 (53%), Gaps = 6/234 (2%)
Query: 17 LIGEVNQSIDSPEK--KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
LIG + + E + I + +SI I NP+ R F+ L L SI+ +G
Sbjct: 11 LIGLTDSENEKKESVYIQDNIKRKIEYLSIEKIASNPYQSRFGFDKSELIKLAASIEKYG 70
Query: 75 IIQPLIVRAIDN-GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
II PLIVR N Y+++ GERR +A K+ L+EVPVII + EI ++ N+QR+
Sbjct: 71 IINPLIVRENGNTEDYELVTGERRLKAGKLLGLTEVPVIIGEFEEYEMAEIILLNNLQRR 130
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
DL+ LEEALGY+QL++ + + ++ + + K + + + LR+L+LP V + R ++S
Sbjct: 131 DLDFLEEALGYQQLLNNFELGEEELANKLCKHPAVIKDRLRLLELPGEVLRLTRNSKVSE 190
Query: 194 GHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
GHAR L + + ++ + +V + ++L++E + + + + +
Sbjct: 191 GHARALLELSDKELQTEVIKQVIENEYTVEELKDLIREILDDLNEYRDKKKVIK 244
>gi|257456842|ref|ZP_05622025.1| ParB family protein [Treponema vincentii ATCC 35580]
gi|257445757|gb|EEV20817.1| ParB family protein [Treponema vincentii ATCC 35580]
Length = 77
Score = 53.1 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 228 EQDNKKEKRKKIFEGSREKEKY-------LTDLEKKISSKVGLNISIKHRNNKGQFCIKY 280
+ + +K E + K+ + D+E++ +G + IK KG I Y
Sbjct: 2 QLKSGSRTGQKKTEPQQAKQPDADDAQLAVKDIEQQFIDALGTKVEIKGNLEKGIVYISY 61
Query: 281 ETNEQLKIICSLL 293
+ L + + +
Sbjct: 62 FSQADLDALYNKI 74
>gi|240145250|ref|ZP_04743851.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|257202713|gb|EEV00998.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
Length = 315
Score = 53.1 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 64/143 (44%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E + E I I I P +P E +E L +SIK +G++
Sbjct: 11 LTAYDDLFQTDESREEAKLSKIRDIPISEIDEFPDHPFKVLMDEDMEQLVESIKRNGVMT 70
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++I+G RR +A ++A L + ++ + ++ + + N+QR + P
Sbjct: 71 PATVRLKEDGRYELISGHRRKKACELAGLETLKCEVKELTRDEAIIVMVESNLQRSVILP 130
Query: 138 LEEALGYEQLISEYGYTQNDIGS 160
E+A Y+ +
Sbjct: 131 SEKAFAYKMRLEAMKRQAGRPPK 153
>gi|307296723|ref|ZP_07576542.1| parB-like partition protein [Sphingobium chlorophenolicum L-1]
gi|306877852|gb|EFN09077.1| parB-like partition protein [Sphingobium chlorophenolicum L-1]
Length = 315
Score = 53.1 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA-GER 96
+ I + I+P+P NPR F+ + L +L SI S G++QP+ V D I+ GER
Sbjct: 23 RVEDIELARILPDPGNPRRSFDDDALAELAASIASRGVLQPITVTPPDAKGMHRISLGER 82
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRA+++A L+ +P I+ V L + ++ E + + G Q
Sbjct: 83 RFRASQLAGLATIPAIVVPVGEGVQLLADQIVENDQRANLSSVELAHAIARMLKGGMNQV 142
Query: 157 DIGSIVGKSRSHVANILRILKLPSS 181
+I + +G+S+ V+ +P+
Sbjct: 143 EIAAALGRSKQFVSLYAAYGDMPAY 167
>gi|169786970|ref|YP_001708782.1| putative partitioning protein [Acinetobacter baumannii AYE]
gi|293611362|ref|ZP_06693659.1| predicted protein [Acinetobacter sp. SH024]
gi|169147131|emb|CAM84801.1| putative partitioning protein [Acinetobacter baumannii AYE]
gi|292826373|gb|EFF84741.1| predicted protein [Acinetobacter sp. SH024]
Length = 299
Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + ++ + E + + I I +P+ PR F + +EDL SI+ G++Q
Sbjct: 15 NTQKHQHAQKEHINDVKELRRNVQITDIQASPNQPRKLFNQQDIEDLAASIEEIGLLQ-P 73
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
I N Y++IAGERR +A + + + + VII + ++ + + EN++R+DL E
Sbjct: 74 IAVRRINDKYELIAGERRLKAHQFLNKNTIEVIIIDASDEEVALLTLAENLKREDLTDYE 133
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
+G L + + + +G +R + L KLP + E + K+
Sbjct: 134 IYVGLTSLDEKLKKNKQKLAKSLGMNREDMYKYLSFEKLPGELIEDLEKQ 183
>gi|229892392|gb|ACQ89828.1| ParB-like protein [Enterococcus faecalis]
Length = 325
Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 65/137 (47%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E + E I I I P +P E +E L +SIK +G++
Sbjct: 21 LTAYDDLFQTDESREEAKLSKIRDIPISEIDEFPDHPFKVLIDEDMEQLVESIKRNGVMT 80
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++I+G RR +A ++A L + ++++ ++ I + N+QR + P
Sbjct: 81 PATVRLKEDGRYELISGHRRRKACELAGLETLKCEVKDLSRDEAIIIMVESNLQRSTILP 140
Query: 138 LEEALGYEQLISEYGYT 154
E+A Y+ +
Sbjct: 141 SEKAFAYKMRLEAMKRQ 157
>gi|294011824|ref|YP_003545284.1| ParB-like protein [Sphingobium japonicum UT26S]
gi|292675154|dbj|BAI96672.1| ParB-like protein [Sphingobium japonicum UT26S]
Length = 553
Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
P +S+ I NPR YF+S+ ++L SI+ GI+QP+++R +
Sbjct: 2 NTPRPTGPTTLSLSKITKG-DNPRRYFDSKKHDELVASIRLRGILQPILLRPKGEIYAIV 60
Query: 92 IAGERRFRAA--KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
AGERR+RA EVPVIIR + ++ +L+ AI EN R D + E+A + ++
Sbjct: 61 -AGERRYRAGLEVYGPDGEVPVIIREMTDQEALDAAIAENDDRDDPSETEQADAAVRYLA 119
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + +G SR+ + L + +L +V+ + + I +GHA L +
Sbjct: 120 ACQGDRAETARRLGWSRAKLDRRLALAELSDAVKLALDERRIKVGHAELLAAIPADKQ 177
>gi|110834936|ref|YP_693795.1| transcriptional repressor protein [Alcanivorax borkumensis SK2]
gi|110648047|emb|CAL17523.1| Transcriptional repressor protein [Alcanivorax borkumensis SK2]
Length = 361
Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 90/240 (37%), Gaps = 12/240 (5%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQ-DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
+++ ++ D + + +S + I +P PR + + + L++L S+K G
Sbjct: 8 SVLSDLENFSDLDSAQPQNQDDSPFRLLPWDKIEEDPDQPRTHMDEDALKELADSMKQKG 67
Query: 75 IIQPLIV---------RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIA 125
G Y I G RR RA +A L +PV + S+
Sbjct: 68 QNGQPRGILQPISVRDNPNKPGYYLINHGHRRHRAQGLAGLKALPVPAILNN-LSTQADQ 126
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
++EN+QR+DL+ ++ + G+ DI +GK++S +A + + +++ +
Sbjct: 127 LLENIQREDLDAMDIGQSI-DALVSKGWKVTDIAKQLGKNKSWLARYRLLYQSNDALKTL 185
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
+A ++ + A V + ++ L + K +
Sbjct: 186 YTSGLCRDVNALVELARAQDKHPADVSRFIQEALSGEATLSRSAVQGFLNSLKGASAPKP 245
>gi|320108897|ref|YP_004184487.1| parB-like partition protein [Terriglobus saanensis SP1PR4]
gi|319927418|gb|ADV84493.1| parB-like partition protein [Terriglobus saanensis SP1PR4]
Length = 528
Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 60/189 (31%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ +S+ + + NPR FE L++L SI + G++ PL+VR + +
Sbjct: 2 ETQIVNATEYRNVSLALLSESKTNPRRTFEEVALKELASSILTQGVLSPLLVRPLTENGF 61
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ--L 147
+IIAG RR+RAA+MA + VPV + ++ + S+LE +VEN+ R +++P+EEA G+
Sbjct: 62 EIIAGARRYRAAQMAEVPTVPVRVVHLSDASALEAQLVENLVRSEIHPMEEAQGFRALLD 121
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + Y+ I + VGKS VA+ L++ L S + +EI +GHA L
Sbjct: 122 LEDPKYSIEQIAAKVGKSPVFVASRLKLADLVPSAVDAFYADEIGVGHALLLAKLPADQQ 181
Query: 208 LAQVIVSKK 216
A + K
Sbjct: 182 DAALSSCFK 190
>gi|111116414|ref|YP_709298.1| putative chromosome partitioning protein [Pseudomonas putida]
gi|111036218|dbj|BAF02408.1| putative chromosome partitioning protein [Pseudomonas putida]
Length = 586
Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Query: 40 DCISIHSIVPNP-HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA---IDNGLYKIIAGE 95
+ + I NP +PR + E L +SI + GIIQP++VR N ++++AG
Sbjct: 7 QVLPLDRIRRNPQIDPRKGRKKSAYEQLVRSISAKGIIQPILVRPVSDDPNYDHEVVAGN 66
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR+ AA A L EVP +IR + ++ + IA +EN R DL P+EEA L+ +
Sbjct: 67 RRWTAAHDAGLIEVPALIRAMSDQEARLIAALENQVRADLTPIEEAQHAVILLEDMANDH 126
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + SR+ + + L + +V + + +E+I +GHA L P
Sbjct: 127 LAVMKALDWSRTKLDSRLLLAHACDAVADALLEEQIKIGHAELLCRLPAPDQ 178
>gi|121582830|ref|YP_973272.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
gi|120596092|gb|ABM39530.1| ParB family protein [Polaromonas naphthalenivorans CJ2]
Length = 324
Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 109/280 (38%), Gaps = 11/280 (3%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ S D K+ + + I NP NPR + + ++++ S+ S G +
Sbjct: 44 PNLGASQDVEILKSTYEVGRVYDVPLGEIKSNPFNPRYLYTNTAIDEMATSLTSGGQMMS 103
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASL--SEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
+ G +I GE R R + L + + R + + E A NV+R+D
Sbjct: 104 ATGFIDEFGAVVLIEGETRLRGCRAGGLLTLRIEIKTRPNSDAALYEEARTANVERRDQT 163
Query: 137 PLEEALGYEQLISEYGYTQND-IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
PL++A+ +++L+++ Y + + HV+ ++ + +LPS V +
Sbjct: 164 PLDDAIKWKELLAKKIYPSQSGLAKALKLGEDHVSRVMSLNELPSKVIHAAAEN-----P 218
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + + + ++ ++ E + ++ + + K ++
Sbjct: 219 GLLSLKMLNAIREYFAVKGEESTLELIFEAGKLSLGYRDVVARRKAAEKGPVKRTRSTKE 278
Query: 256 KISSKVGLNISIKHRNNKGQFCIKYE--TNEQLKIICSLL 293
+ G+N+ ++ G+ + + + E + I + +
Sbjct: 279 AL-DFKGVNVELRTFEEDGRLELSLKGLSPEDTEEIRTKI 317
>gi|299136222|ref|ZP_07029406.1| parB-like partition protein [Acidobacterium sp. MP5ACTX8]
gi|298602346|gb|EFI58500.1| parB-like partition protein [Acidobacterium sp. MP5ACTX8]
Length = 535
Score = 53.1 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 102/197 (51%), Gaps = 2/197 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + S+ + NPR FE L +L ++I+ HG++ PL+VR + ++I+ G
Sbjct: 8 ATEYRNLPLASLTESKTNPRRSFEHNALHELAKTIQVHGVLSPLLVRPLTEQGFEIVFGA 67
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ--LISEYGY 153
RR+RAA +A + VPV I+N+ + +E +VEN+QR D++P+EEA G+ + E Y
Sbjct: 68 RRYRAAHIAEVDTVPVRIKNMTDAEVIEAQLVENLQRSDVHPMEEASGFRALLDLEEPKY 127
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
+ I + GK+ ++VA L++ +L +V + +EEI +GHA L +
Sbjct: 128 SIEQISAKTGKNPAYVAARLKLTELTQNVVDAFYREEIGVGHALLLAKLQPDQQEQALAA 187
Query: 214 SKKMSVRDTEELVQEQD 230
K + +
Sbjct: 188 CFKEDWSAGGQKAKRIL 204
>gi|302388045|ref|YP_003823867.1| parB-like partition protein [Clostridium saccharolyticum WM1]
gi|302198673|gb|ADL06244.1| parB-like partition protein [Clostridium saccharolyticum WM1]
Length = 305
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 68/135 (50%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ S E + + + + P +P + E +E +SIK G++ PL
Sbjct: 7 SITTENRSGSAADAAAKEQRTEMPLSDLHPFEGHPFKVLDDELMEQTVESIKQIGVVSPL 66
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
IVR G ++I++G RR AA++A L VPVI++ +D+ +++ + N+QR+++ P E
Sbjct: 67 IVRPDPEGGFEILSGHRRLHAAQLAGLETVPVIVKEMDDDAAIIFMVDSNLQRENILPSE 126
Query: 140 EALGYEQLISEYGYT 154
A Y+ + +
Sbjct: 127 RAFSYKMKLEAMKHQ 141
>gi|172054969|ref|YP_001806296.1| ParB family chromosome partitioning protein [Cyanothece sp. ATCC
51142]
gi|171701250|gb|ACB54230.1| chromosome partitioning protein, ParB family [Cyanothece sp. ATCC
51142]
Length = 313
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 49/112 (43%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
E + + I I PR YF+ E LE L SI+ GII+PL+VR + + ++AG
Sbjct: 18 PTEPETDLPIELISLETSQPRRYFDPEKLEQLADSIRKFGIIEPLLVRQKGSSYF-LVAG 76
Query: 95 ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
ERR+RAAKMA L VPV++R + ++ +L +A+VEN+ R+DLNP+EE G
Sbjct: 77 ERRYRAAKMAELKTVPVVVRELSDEEALAVALVENLVREDLNPVEETEGILC 128
>gi|254414070|ref|ZP_05027838.1| ParB-like nuclease domain family [Microcoleus chthonoplastes PCC
7420]
gi|196179206|gb|EDX74202.1| ParB-like nuclease domain family [Microcoleus chthonoplastes PCC
7420]
Length = 384
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ ++ I I I PNP PR F SE +E + +S++ G ++P+I+ +
Sbjct: 52 AALREQLESTAGILSIPIEQIQPNPEQPRQTFLSESVESMSRSLEKDGQLEPIILMRRGD 111
Query: 87 GLYKIIAGERRFRAAKMASLSEVP 110
I GERR+R+A+ +
Sbjct: 112 --LVIFDGERRWRSARALGWQNLH 133
>gi|319936972|ref|ZP_08011382.1| chromosome partitioning protein parB [Coprobacillus sp. 29_1]
gi|319807908|gb|EFW04487.1| chromosome partitioning protein parB [Coprobacillus sp. 29_1]
Length = 312
Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 64/137 (46%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +++ + ++ E I + I P +P + E + L +S+K G+I
Sbjct: 10 LTKLDDLFTTQAQRDEEQLSKIRDIPLELIDDFPDHPFKVRDDEDMMQLVESVKERGVIT 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++++G RR RA ++A + I +++ + + + N QR ++ P
Sbjct: 70 PATVRQKEDGRYELVSGHRRKRACELAGFETLRSEIVDLNRDEATILMVESNFQRSEILP 129
Query: 138 LEEALGYEQLISEYGYT 154
E+A Y+ +
Sbjct: 130 SEKAFAYKMRLEAMKRQ 146
>gi|84503316|ref|ZP_01001394.1| hypothetical protein OB2597_18696 [Oceanicola batsensis HTCC2597]
gi|84388370|gb|EAQ01320.1| hypothetical protein OB2597_18696 [Oceanicola batsensis HTCC2597]
Length = 723
Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 78/213 (36%), Gaps = 14/213 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ ++ + + ++ E I + + P+P N R S
Sbjct: 1 MAKTTTRPK---------PATAKKTEATELSVPGGGTDIRMIPLDQLEPSPLNVRKVAAS 51
Query: 61 EGLE-DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRN 115
+ +L SI+ GI Q L+V A+ + + AG RR + A+ + + +
Sbjct: 52 ASDDAELLVSIRETGIKQNLVVHALSETRFAVDAGGRRLKALKQLAEDSVIPADHPVPCL 111
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
VD+K + + ++ + + + G ++++I G S V L++
Sbjct: 112 VDDKRNAILTSATENLQRAAMHPADQFEAFEAMIAEGRSEDEIALKFGVSVDLVRRRLKL 171
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
++ + E R +++L T D
Sbjct: 172 ARVAPEIIEQFRAGDLTLECVMAFTLTDDHDRQ 204
>gi|67925364|ref|ZP_00518716.1| ParB-like partition protein [Crocosphaera watsonii WH 8501]
gi|67852795|gb|EAM48202.1| ParB-like partition protein [Crocosphaera watsonii WH 8501]
Length = 233
Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 2/149 (1%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--Y 89
T+ + + +++I+ PR YF+ + L+ L S+K++GI++ L+VR I + Y
Sbjct: 21 TQETDSTPQTLKLNAIILPKTQPRRYFDPQKLDQLSLSVKTYGILENLLVRPIPSKPGVY 80
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+++AGERR+RAA A+L VPV IR++ + +LEIA+VEN+QR+DLNP+EE QL++
Sbjct: 81 ELVAGERRYRAAVAANLDTVPVTIRDLTDSQALEIALVENLQREDLNPVEETEAILQLLA 140
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ + +I
Sbjct: 141 NRLQLPDYFAVSSLLYKMQNMVAKKITDN 169
>gi|291520873|emb|CBK79166.1| ParB-like partition proteins [Coprococcus catus GD/7]
Length = 314
Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +++ + ++ E I + I P +P + E + L +S+K G+I
Sbjct: 10 LTKLDDLFTTQAQRDEEQLSKIRDIPLELIDDFPDHPFKVRDDEDMMQLVESVKERGVIT 69
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++++G RR RA ++A + I +++ + + + N QR ++ P
Sbjct: 70 PATVRQKEDGRYELVSGHRRKRACELAGFETLRSEIVDLNRDEATILMVESNFQRSEILP 129
Query: 138 LEEALGYEQL 147
E+A Y+
Sbjct: 130 SEKAFAYKMR 139
>gi|307726771|ref|YP_003909984.1| parB-like partition protein [Burkholderia sp. CCGE1003]
gi|307587296|gb|ADN60693.1| parB-like partition protein [Burkholderia sp. CCGE1003]
Length = 352
Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 19/265 (7%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETI------------PESQDCISIHSIVPNPHNPRNYFE 59
R L++++ + + D+ + + E+ + + +I P+P NPR+++
Sbjct: 48 RTLSSVMPQTSSVSDTADTQNESAAYRAWRIEHGYRSGQVIELPLKAIKPSPFNPRHFYL 107
Query: 60 SEGLEDLCQSIKSHGIIQPL--IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ +L ++ G Q + I + G Y + G RR RA K A+ V I+ ++
Sbjct: 108 KSSIAELAVNLAKQGQQQAIHVIPDYDNPGTYFVSDGGRRVRALKEANQEAVKAIVIDLP 167
Query: 118 -NKSSLEIAIVENVQRKDLNPLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRI 175
S ++ NVQR + A+ +++ + +Q ++ +G S VA L I
Sbjct: 168 IGLESYKLGYDLNVQRDSQTVFDNAVVWKRFLEDRHFQSQKELAEHLGLDESTVAVALSI 227
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSL---AQVIVSKKMSVRDTEELVQEQDNK 232
KLP +V + + G + A + + K+ D K
Sbjct: 228 AKLPEAVMQEMVARPDRFGSNMAYQVGRYHAARGADATLRLIHKIVSDDLSTRQVADIVK 287
Query: 233 KEKRKKIFEGSREKEKYLTDLEKKI 257
+ +++Y LE K+
Sbjct: 288 GRATAQESTKPAGRQRYAQRLEIKL 312
>gi|226357668|ref|YP_002787407.1| ParB-like partition protein [Deinococcus deserti VCD115]
gi|226319910|gb|ACO47903.1| putative ParB-like partition protein [Deinococcus deserti VCD115]
Length = 296
Score = 52.8 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
A+L+ S S E ++ + + +VP R YF+ + ++ L SI+ HG
Sbjct: 9 ASLL----NSKTSKEAVYNQRSKTILEVPLDQVVPFSGQARRYFDHDSIKALADSIEKHG 64
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE-VPVIIRNVDNKSSLEIAIVENVQRK 133
+ PL+V ++ Y+IIAGERR++A +M + +I +V + EIA+V+N+QR+
Sbjct: 65 QLSPLLVWRNNDEQYEIIAGERRWKALRMLKRRVALADVIMDVTRDQAFEIALVDNLQRE 124
Query: 134 DLNPLEEALGYEQLISEYGY 153
+LN EE LI+
Sbjct: 125 NLNRYEEVRAKLDLIARRLM 144
>gi|94497037|ref|ZP_01303610.1| chromosome partition protein B [Sphingomonas sp. SKA58]
gi|94423409|gb|EAT08437.1| chromosome partition protein B [Sphingomonas sp. SKA58]
Length = 315
Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA-GER 96
+ I + I+P+P NPR F+ + L +L SI S G++QP+ V D I GER
Sbjct: 23 RVEDIELARILPDPGNPRRSFDDDALAELAASIASRGVLQPITVTPPDANGMHRIRLGER 82
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RFRA+++A L+ +P I+ V L + ++ E + + G Q
Sbjct: 83 RFRASQLAGLATIPAIVVPVGEGVQLLADQIVENDQRANLSSVELAHAIARMLKGGMNQV 142
Query: 157 DIGSIVGKSRSHVANILRILKLPSS 181
+I + +G+S+ V+ +P+
Sbjct: 143 EIAAALGRSKQFVSLYAAYGDMPAY 167
>gi|296531712|ref|ZP_06894542.1| chromosome partitioning protein SpoOJ [Roseomonas cervicalis ATCC
49957]
gi|296267960|gb|EFH13757.1| chromosome partitioning protein SpoOJ [Roseomonas cervicalis ATCC
49957]
Length = 293
Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 43 SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRA 100
+ I P+P PR +F++ + L ++ + G +QP+++R + ++AGERR+RA
Sbjct: 41 PLERIHPDPDQPRKHFDAAEIAALAATMAAEGQLQPVLLRRHPERRGEWILVAGERRYRA 100
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
AK S + I D + A++EN+QR+DL P EEA G ++L++ G TQ +
Sbjct: 101 AKHNGWSSLLAIEHEGD---AALAALLENLQRQDLTPEEEARGVQRLLATRGMTQVAASA 157
Query: 161 IVGKSRSHVANILRILKLPSSV 182
++G+S + ++ LR+L LP
Sbjct: 158 LLGRSTAEISATLRLLTLPEDF 179
>gi|224079537|ref|XP_002335684.1| predicted protein [Populus trichocarpa]
gi|222834534|gb|EEE73011.1| predicted protein [Populus trichocarpa]
Length = 173
Score = 52.4 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 92/172 (53%), Gaps = 17/172 (9%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + SI + NPR +F++ L++L SIK+ G+ QP+
Sbjct: 2 TTANDNPTAALPIPGAGALMLHVPLQSIARSLRNPRKHFDAAKLQELADSIKATGVHQPI 61
Query: 80 IVRA-----------------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
++R + Y+++AGERR+RA+++A ++E+P +IR + + +L
Sbjct: 62 LLRPLPEARIADEQAWAKSEKRERAQYELVAGERRWRASQIAGMAEIPAMIRPMSDAEAL 121
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
A++EN+QR+D+ LEEA GY +L+ T I VGKSR++V N+++
Sbjct: 122 RAAVIENLQREDVTKLEEAEGYRELLDLGETTAEKIAEDVGKSRTYVFNVMK 173
>gi|239820481|ref|YP_002947666.1| parB-like partition protein [Variovorax paradoxus S110]
gi|239805334|gb|ACS22400.1| parB-like partition protein [Variovorax paradoxus S110]
Length = 299
Score = 52.4 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+AL + + + P + +++ I +P PR E +E+L +SI+ H
Sbjct: 9 LSAL-SQFRAADLLTGEAAPAGPGAPTQVALERIDFDPDQPRRRMRGERIEELAESIREH 67
Query: 74 GIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+++P+ +R Y + GERR RAA+ A LS VP + + + EN+
Sbjct: 68 GVLEPVSLRCHPEHADRYIVNRGERRVRAARRAGLSCVPAFVDARVDPFAQA---AENLH 124
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R+D++P + A+ + G+++ +I +GK RS + R+ + P +RE + + +
Sbjct: 125 REDMSPFDLAV-FIAEREGEGHSRAEIARRLGKPRSFITEAARLNEAPPQLREAVEEGRL 183
>gi|312887366|ref|ZP_07746967.1| parB-like partition protein [Mucilaginibacter paludis DSM 18603]
gi|311300169|gb|EFQ77237.1| parB-like partition protein [Mucilaginibacter paludis DSM 18603]
Length = 620
Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
++ +++ I +P N R ++ L D I HGII PL +R
Sbjct: 22 KTNAAAISPIATEGVLKNVAVSEIDFSPLNYRKFYSEAALADFATEIAVHGIISPLTLRE 81
Query: 84 IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
+ G ++++AGERR RAA++A L+EVP +I+ + + EI + EN+QR++ +P+ EA
Sbjct: 82 LPEGRHELVAGERRLRAAQLAGLTEVPAVIKVLTDAEVTEIQLAENLQRENPHPMNEAQA 141
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS 203
L+ + T ++I + +GKSR+ V + R+L L ++EM + +++ A + + +
Sbjct: 142 I-GLMLQVHKTIDEIAARLGKSRTFVYSRTRLLNLIEPIQEMFFADALTIQEAFDIAALA 200
Query: 204 DPLSLAQVIVSKKMSVRDTEELVQEQ 229
+ T V
Sbjct: 201 TEAQEDFFVQYCSDWKEQTGFRVTNL 226
>gi|313113302|ref|ZP_07798904.1| ParB-like partition protein [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310624377|gb|EFQ07730.1| ParB-like partition protein [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 309
Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
+GL L + E + E E I I + P ++P + E + +SI
Sbjct: 11 KGLDDLFS-------TEENRQEEQQEQVRQIPIDDLHPFTNHPFKVLDDEAMTRTVESIA 63
Query: 72 SHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+G++ PLI R +G Y+II+G RR AAK+A L +PVI+R + + +++ + + N+
Sbjct: 64 QYGVLAPLIARPRPDGDGYEIISGHRRQYAAKLAGLDTLPVIVRQMSDDAAVILMVDSNL 123
Query: 131 QRKDLNPLEEALGYEQL 147
QR+ + P E A Y+
Sbjct: 124 QREHILPSERAFAYKMK 140
>gi|325284836|ref|YP_004264298.1| parB-like partition protein [Deinococcus proteolyticus MRP]
gi|324316551|gb|ADY27663.1| parB-like partition protein [Deinococcus proteolyticus MRP]
Length = 309
Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 15 AALIGEVNQSIDSPE--KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
+AL + ++ + + E + + + + +P R F +G+++L + I +
Sbjct: 8 SALQAAMARASKAQSGIQAAEERHVPVEYLRLDDLDVSPSQARKDF--QGIDELARDIAA 65
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+G++QP++VR + G Y+++AGERR RA++ A + +P +IR++ + + + EN+QR
Sbjct: 66 NGVLQPVLVRPLAGGRYQLVAGERRLRASRQAQQATIPAVIRDMTDLEARMHGLRENLQR 125
Query: 133 KDLNPLEEALGYEQ 146
+DLN E A
Sbjct: 126 EDLNAYEVARAVLD 139
>gi|307293042|ref|ZP_07572888.1| parB-like partition protein [Sphingobium chlorophenolicum L-1]
gi|306881108|gb|EFN12324.1| parB-like partition protein [Sphingobium chlorophenolicum L-1]
Length = 545
Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
T P + + SIV NPR YF+ + E++ SI+ GI+QP+++R D+ +
Sbjct: 2 TSLQPSYPSTLPLASIVKG-DNPRRYFDRKKHEEMVASIRQRGILQPILLRPKDDVYAIV 60
Query: 92 IAGERRFRAAKMAS--LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
AGERR+RA EVPVIIR + ++ +L+ AI EN R D + E+A + ++
Sbjct: 61 -AGERRYRAGLEVYGLDGEVPVIIRVMTDQEALDAAIAENDDRDDPSETEQADAAVRYLA 119
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + + SR+ + L + +L + + + + I +GHA L
Sbjct: 120 ACNGDRAEAARRLAWSRAKLDRRLALAELTDAAKTALDERRIKVGHAELLAVIPKDKQ 177
>gi|146319848|ref|YP_001199560.1| transcriptional regulator [Streptococcus suis 05ZYH33]
gi|145690654|gb|ABP91160.1| Predicted transcriptional regulator [Streptococcus suis 05ZYH33]
Length = 71
Score = 52.4 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 225 LVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETN 283
+ + + KK ++++++L + E +S +G I K +N G+ I +
Sbjct: 1 MCRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISFNDL 60
Query: 284 EQLKIICS 291
++ + I +
Sbjct: 61 DEFERIIN 68
>gi|291520334|emb|CBK75555.1| hypothetical protein CIY_30410 [Butyrivibrio fibrisolvens 16/4]
Length = 60
Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
M+ K LG+GL +LI + + I + + P + + I+ + PN PR
Sbjct: 1 MA--TKKGGLGKGLDSLIVKKEEGIVAVNPEQHGAPVN---VDINKVEPNKLQPRKT 52
>gi|225375052|ref|ZP_03752273.1| hypothetical protein ROSEINA2194_00675 [Roseburia inulinivorans DSM
16841]
gi|225213124|gb|EEG95478.1| hypothetical protein ROSEINA2194_00675 [Roseburia inulinivorans DSM
16841]
Length = 233
Score = 52.4 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 67/113 (59%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
E IS+ + P P +P E +++ +S+K +G++ P + R ++G Y++IAG
Sbjct: 24 QEVVVQISLSELHPFPDHPFQVREDASMQETAESVKEYGVLVPALARPREDGGYELIAGH 83
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
RR A ++A L+ +PVI+R++D ++ I + N+QR+++ P E A Y+ +
Sbjct: 84 RRKHACELAGLATMPVIVRDIDRDAATIIMVDSNLQRENILPSERAKAYKMKM 136
>gi|213692659|ref|YP_002323245.1| parB-like partition protein [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|213524120|gb|ACJ52867.1| parB-like partition protein [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320458809|dbj|BAJ69430.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 470
Score = 52.0 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIA 93
S I + + PNPHNPR + + +L SI++ GI Q L+V +Y+++
Sbjct: 4 SIVDIPVSQLEPNPHNPRR--DVGDVRELADSIRAQGIKQELLVTPSGDRDGRPMYRVVI 61
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
G RR AAK+A L VP + + + E+ +VEN QR DL PLEEA GY+
Sbjct: 62 GHRRLAAAKIAGLDMVPCRVEELSAREERELMLVENTQRVDLTPLEEADGYQ 113
>gi|225374556|ref|ZP_03751777.1| hypothetical protein ROSEINA2194_00171 [Roseburia inulinivorans DSM
16841]
gi|257438072|ref|ZP_05613827.1| conserved hypothetical protein [Faecalibacterium prausnitzii
A2-165]
gi|225213616|gb|EEG95970.1| hypothetical protein ROSEINA2194_00171 [Roseburia inulinivorans DSM
16841]
gi|257199403|gb|EEU97687.1| conserved hypothetical protein [Faecalibacterium prausnitzii
A2-165]
Length = 302
Score = 52.0 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 68/139 (48%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ S E + + + + P +P + E +E +SIK G++ PL
Sbjct: 7 SITTENRSGSAADAAAKEKRTEMPLSDLHPFEGHPFKVLDDELMEQTVESIKQIGVVSPL 66
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
IVR G ++I++G RR AA++A L VPVI++ +D+ +++ + N+QR+++ P E
Sbjct: 67 IVRPDPEGGFEILSGHRRLHAAQLAGLETVPVIVKEMDDDAAIIFMVDSNLQRENILPSE 126
Query: 140 EALGYEQLISEYGYTQNDI 158
A Y+ + +
Sbjct: 127 RAFSYKMKLEAMKHQGQRK 145
>gi|329113909|ref|ZP_08242677.1| Chromosome Partitioning Protein [Acetobacter pomorum DM001]
gi|326696775|gb|EGE48448.1| Chromosome Partitioning Protein [Acetobacter pomorum DM001]
Length = 342
Score = 52.0 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYF-ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ ++VPNP+NPR ++ L +IK+ G+I VR +++G I+AG
Sbjct: 2 TELRRVDPRTLVPNPNNPRKTQPDARAEHQLALNIKTVGLIHAPCVRELEDGRLMIVAGH 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA A L E+ V +R+ D KS A+ ENV R D+ E+ G + +
Sbjct: 62 RRVRACIAAKLDEIDVHVRSGDEKSDTMAAVAENVVRADMTESEQWRGVLDMREKGATDT 121
Query: 156 NDIGSIV 162
+ +
Sbjct: 122 EICRAFM 128
>gi|258513250|ref|YP_003189506.1| chromosome partitioning nuclease protein ParB [Acetobacter
pasteurianus IFO 3283-01]
gi|256635153|dbj|BAI01127.1| chromosome partitioning nuclease protein ParB [Acetobacter
pasteurianus IFO 3283-01]
gi|256638208|dbj|BAI04175.1| chromosome partitioning nuclease protein ParB [Acetobacter
pasteurianus IFO 3283-03]
gi|256641262|dbj|BAI07222.1| chromosome partitioning nuclease protein ParB [Acetobacter
pasteurianus IFO 3283-07]
gi|256644317|dbj|BAI10270.1| chromosome partitioning nuclease protein ParB [Acetobacter
pasteurianus IFO 3283-22]
gi|256647372|dbj|BAI13318.1| chromosome partitioning nuclease protein ParB [Acetobacter
pasteurianus IFO 3283-26]
gi|256650425|dbj|BAI16364.1| chromosome partitioning nuclease protein ParB [Acetobacter
pasteurianus IFO 3283-32]
gi|256653416|dbj|BAI19348.1| chromosome partitioning nuclease protein ParB [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256656469|dbj|BAI22394.1| chromosome partitioning nuclease protein ParB [Acetobacter
pasteurianus IFO 3283-12]
Length = 370
Score = 52.0 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYF-ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ ++VPNP+NPR ++ L +IK+ G+I VR +++G I+AG
Sbjct: 2 TELRRVDPRTLVPNPNNPRKTQPDARAEHQLALNIKTVGLIHAPCVRELEDGRLMIVAGH 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR RA A L E+ V +R+ D KS A+ ENV R D+ E+ G + +
Sbjct: 62 RRVRACIAAKLDEIDVHVRSGDEKSDTMAAVAENVVRADMTESEQWRGVLDMREKGATDT 121
Query: 156 NDIGSIV 162
+ +
Sbjct: 122 EICRAFM 128
>gi|330825848|ref|YP_004389151.1| PRTRC system ParB family protein [Alicycliphilus denitrificans
K601]
gi|329311220|gb|AEB85635.1| PRTRC system ParB family protein [Alicycliphilus denitrificans
K601]
Length = 587
Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 94/179 (52%), Gaps = 4/179 (2%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YK 90
T+ SQ + I IV NPR YF+ + +L + I++ G+++P++VR + Y+
Sbjct: 2 TDPTQPSQPTLPIRKIVQGK-NPREYFDPAEMAELEEGIRAVGVLEPIVVRPVPGTDLYE 60
Query: 91 IIAGERRFRAAKMA--SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
IIAGERR+RAAK ++PV+I++ +++++ ++++EN R ++P EEA ++ +
Sbjct: 61 IIAGERRWRAAKNVFGDGYDMPVVIKDANDETAEAMSVIENYHRAAMSPAEEAHAAQRQL 120
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + ++G S + L +L +V + + I LGHA L
Sbjct: 121 LRQRGDKEEAARLMGWSLDVLERRLALLACTPAVLKALTTRTIQLGHAELLAGIPPDKQ 179
>gi|167760890|ref|ZP_02433017.1| hypothetical protein CLOSCI_03278 [Clostridium scindens ATCC 35704]
gi|167661493|gb|EDS05623.1| hypothetical protein CLOSCI_03278 [Clostridium scindens ATCC 35704]
Length = 314
Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 64/141 (45%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E + E I I I P +P E +E L +SIK +G++
Sbjct: 11 LTAYDDLFQTDESRAEAKLSKIRDIPIAEIDEFPDHPFKVLLDEDMEQLVESIKRNGVMT 70
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P VR ++G Y++I+G RR +A ++A L + ++ + ++ + + N+QR + P
Sbjct: 71 PATVRLKEDGRYELISGHRRKKACEIAGLETLKCEVKELTRDEAIIVMVESNLQRSTILP 130
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E+A Y+ +
Sbjct: 131 SEKAFAYKMRLEAMNRQGQRT 151
>gi|58038290|ref|YP_190259.1| hypothetical protein GOX2537 [Gluconobacter oxydans 621H]
gi|58000704|gb|AAW59603.1| hypothetical protein GOX2537 [Gluconobacter oxydans 621H]
Length = 620
Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 2/208 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFE-SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ + ++++ NP+NPR + L +I++ G++ P VR +++G IIAG
Sbjct: 2 DELRLVDPNTLIANPNNPRQTKPGQASIRQLALNIRAVGLVHPPRVRELEDGSLMIIAGH 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR AA A L+E+ V + VDN A EN+ R+ + ++ ++ E GYT
Sbjct: 62 RRTEAAIYAGLTEIQVHVTKVDNGLEDLAAASENMIREGMTEPDQWRAVTRMREELGYTD 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART-LVSTSDPLSLAQVIVS 214
+ + + +++ + + KL + I R L +S A
Sbjct: 122 QQLCMALMITPAYLRGLTLLAKLHPPILHAIEIGRGPDQKERRTLALSSLEDQAAAWAEM 181
Query: 215 KKMSVRDTEELVQEQDNKKEKRKKIFEG 242
SV + E+ + N ++ +
Sbjct: 182 FAESVEEGEDPAGYRLNAEDPDDTVNWR 209
>gi|296112160|ref|YP_003622571.1| plasmid partitioning protein parB [Thiomonas sp. 3As]
gi|294341972|emb|CAZ90400.1| plasmid partitioning protein parB [Thiomonas sp. 3As]
Length = 372
Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 7/213 (3%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
GR ALI N + S + + + + I R F++E + +L +SI
Sbjct: 8 GRKADALIPASNPA--SFAAMFDPNADQWSLLDLDDIEI-RAQSRQEFDAESIAELARSI 64
Query: 71 KSHGIIQPLIVRAIDNG---LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
G P+IVR + G Y ++AGERR RA + +V +IR + + + I
Sbjct: 65 ADIGQAVPVIVRRAEAGAALPYVLVAGERRCRALRELGREQVRAVIRTISDTDAAAIQAA 124
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+ R++L+ +++A ++E + GKS V+ + +L LP + ++
Sbjct: 125 ENIHRENLSQMDQAR-MVAQMAETLGSAEAAARHFGKSPGWVSQQMMLLNLPPVAQTVVD 183
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
S VST + S A ++
Sbjct: 184 DNLSSDLAVIAAVSTVERQSGATAAAEVVRQLK 216
>gi|241762987|ref|ZP_04761049.1| parB-like partition protein [Acidovorax delafieldii 2AN]
gi|241367939|gb|EER62158.1| parB-like partition protein [Acidovorax delafieldii 2AN]
Length = 595
Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGER 96
+Q + I IV NPR YF+ + +L + I++ G+++P++VR + Y+IIAGER
Sbjct: 5 NQPTLPIRKIVQGK-NPREYFDPAEMAELEEGIRAVGVLEPIVVRPVPGTDLYEIIAGER 63
Query: 97 RFRAAKMA--SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
R+RAAK ++PV+I++ ++++ ++++EN R ++P EEA ++ +
Sbjct: 64 RWRAAKNVFGDDYDMPVVIKDASDETAEAMSVIENYHRAAMSPAEEAHAAQRQLLRQRGD 123
Query: 155 QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + ++G S + L +L +V + + I LGHA L
Sbjct: 124 KEEAARLMGWSPEVLERRLALLACTPAVLKALTTRTIQLGHAELLSGIPPDKQ 176
>gi|288959739|ref|YP_003450079.1| chromosome partitioning protein [Azospirillum sp. B510]
gi|288912047|dbj|BAI73535.1| chromosome partitioning protein [Azospirillum sp. B510]
Length = 284
Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA-IDNGLYKIIAGER 96
+ + ++ NP PR F+ + L L SI HG+ QP++V+ + G Y+++AGER
Sbjct: 38 RLIEVDLDAVETNPGQPRTVFDDDSLRSLADSIARHGLQQPVLVQEAAEKGRYRLVAGER 97
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RA L I + EIA++ENVQR DL+ ++ A G QLI +GYTQ
Sbjct: 98 RLRA---HRLLGRGTIAAIITKGRPEEIALIENVQRVDLDAIDLARGLSQLIEAHGYTQA 154
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
++ + VG S + V+ L++L+LP + R ++ +
Sbjct: 155 EVAAAVGCSEAEVSKRLKVLRLPDDILADYRANPDAVSRS 194
>gi|320108086|ref|YP_004183676.1| parB-like partition protein [Terriglobus saanensis SP1PR4]
gi|319926607|gb|ADV83682.1| parB-like partition protein [Terriglobus saanensis SP1PR4]
Length = 550
Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 61/189 (32%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ +S+ + + NPR FE L++L SI++ G++ PL+VR + +
Sbjct: 23 ETQVIQATEYRNVSLALLNESKTNPRRTFEETALKELADSIRTQGVLSPLLVRPLTEKGF 82
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ--L 147
+IIAG RR+RAA+MA VPV I N+ + +LE +VEN+ R +++P+EEA G+
Sbjct: 83 EIIAGARRYRAAQMAETPTVPVRIVNLSDAEALEAQLVENLVRSEIHPMEEAQGFRALLD 142
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ E Y+ IG+ VGKS++ VA L++ L S + ++I +GHA L
Sbjct: 143 LEEPKYSIEQIGARVGKSQAFVAARLKLTDLVPSSVDAFYADDIGVGHALLLAKLPADQQ 202
Query: 208 LAQVIVSKK 216
+ K
Sbjct: 203 EDALKACFK 211
>gi|161506583|ref|YP_001573704.1| parB-like partition protein [Burkholderia multivorans ATCC 17616]
gi|189348892|ref|YP_001942087.1| ParB family partition protein [Burkholderia multivorans ATCC 17616]
gi|160346821|gb|ABX19904.1| parB-like partition protein [Burkholderia multivorans ATCC 17616]
gi|189339030|dbj|BAG48097.1| ParB family partition protein [Burkholderia multivorans ATCC 17616]
Length = 321
Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 100/265 (37%), Gaps = 9/265 (3%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ ++ S + + I I I N NPR + + + ++ +S+ + G Q I
Sbjct: 44 SGAVGSSQDPRKYEVGHVYEIPIGKIRSNSVNPRAIYTASAVSEMAESLLARGQGQAAIG 103
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLS--EVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
D+ +I GERR R A+ A LS + + + + E A NV+RKD +PL+
Sbjct: 104 YVNDDAEIVLIDGERRLRGARTAGLSTLRIEIRPKPGSERELYEEARAANVERKDQSPLD 163
Query: 140 EALGYEQLISEYGYTQN-DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
+A+ +++LI+ Y + + HV+ L + +LP+ + + + L
Sbjct: 164 DAIKWKELIARKIYPTQAALAKALNLGEDHVSRTLSLAQLPNKLVQAAAEHPELLSLKML 223
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
+ +S L + K R + +++S
Sbjct: 224 NAIREFWEVKGDDETLELISEAAKNGLGYRDVAARRKAAAKGPVRRPRSTR-----EQLS 278
Query: 259 SKVGLNISIKHRNNKGQFCIKYETN 283
+ G K G+ +K +
Sbjct: 279 FR-GAKGEFKSFEEDGRIELKLKGL 302
>gi|295103006|emb|CBL00550.1| ParB-like partition proteins [Faecalibacterium prausnitzii SL3/3]
Length = 309
Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 8/137 (5%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
+GL L + E + E E I I ++ P ++P + E + +SI
Sbjct: 11 KGLDDLFS-------TEENRQEEQREQVQQIPIDALHPFINHPFKVLDDEAMTRTVESIA 63
Query: 72 SHGIIQPLIVRA-IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+G++ PLI R D Y+II+G RR AAK+A L +PVI+RN+D+ +++ + + N+
Sbjct: 64 QYGVLAPLIARPRPDGDGYEIISGHRRQYAAKLAGLDTLPVIVRNMDDNAAVLLMVDSNL 123
Query: 131 QRKDLNPLEEALGYEQL 147
QR+ + P E A Y+
Sbjct: 124 QREHILPSERAFAYKMK 140
>gi|121593964|ref|YP_985860.1| ParB family protein [Acidovorax sp. JS42]
gi|120606044|gb|ABM41784.1| ParB family protein [Acidovorax sp. JS42]
Length = 587
Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 94/179 (52%), Gaps = 4/179 (2%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YK 90
T+ SQ + I IV NPR YF+ + +L + +++ G+++P++VR + Y+
Sbjct: 2 TDPTQPSQPTLPIRRIVQGK-NPREYFDPAEMAELEEGVRAVGVLEPIVVRPVPGTDLYE 60
Query: 91 IIAGERRFRAAKMA--SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
IIAGERR+RAAK ++PV+I++ +++++ ++++EN R ++P EEA ++ +
Sbjct: 61 IIAGERRWRAAKNVFGDGYDMPVVIKDANDETAEAMSVIENYHRAAMSPAEEAHAAQRQL 120
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + ++G S + L +L +V + + I LGHA L
Sbjct: 121 LRQRGDKEEAARLMGWSPDVLERRLALLACTPAVLKALTTRTIQLGHAELLSGIPPDKQ 179
>gi|269926056|ref|YP_003322679.1| parB-like partition protein [Thermobaculum terrenum ATCC BAA-798]
gi|269789716|gb|ACZ41857.1| parB-like partition protein [Thermobaculum terrenum ATCC BAA-798]
Length = 409
Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 35 IPESQDCISIHSIVPNPHNPRNY----FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ I I PNP PR+ F +E+L ++IK HG++QP++V+ Y+
Sbjct: 35 PTSQVVEVEIERIRPNPAQPRSQTSSGFSKSSIEELAENIKEHGLLQPILVKDTG-RFYQ 93
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI-VENVQRKDLNPLEEALGYEQLIS 149
I+AGERR+RA ++ + ++PV I ++ + EN+QRK+L LEEA + LI
Sbjct: 94 IVAGERRYRACQLLGMEKIPVRIIEPKDEQEELMISLAENLQRKNLGALEEARVFRTLIH 153
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRI 175
++G + D+ + G+S +HV L++
Sbjct: 154 KFGLSYRDLARLSGRSVAHVHGRLQL 179
>gi|119510936|ref|ZP_01630058.1| ParB-like partition protein [Nodularia spumigena CCY9414]
gi|119464375|gb|EAW45290.1| ParB-like partition protein [Nodularia spumigena CCY9414]
Length = 385
Score = 51.6 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
IS+ I NP PR F SE +E + +S+ S G ++P+I+ + I
Sbjct: 59 QSQSGIQSISLEKIQANPEQPRQTFLSESIESMSRSLVSDGQLEPIILIQRE--HLVIFD 116
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
GERR+R+AK + +I + A++ ++ R+DLNPL++A
Sbjct: 117 GERRWRSAKNLGWENLQAVIIPEPDA-LHRKALITSLHREDLNPLDKAEAI 166
>gi|255021969|ref|ZP_05293977.1| parB-like partition protein [Acidithiobacillus caldus ATCC 51756]
gi|254968605|gb|EET26159.1| parB-like partition protein [Acidithiobacillus caldus ATCC 51756]
Length = 434
Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 22/190 (11%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPE-SQDCISIHSIVPNPHNPRNYF- 58
MS + L GL + E+ + + +++ ++ P+P+ PR
Sbjct: 1 MSKANT--DLMSGLD--LSEIRSVLKKDTAPSPENGGMQVLSLALDAVEPDPNQPRRQME 56
Query: 59 ---ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN 115
+ + LEDL +SI HGI+ P+ V + Y+I++GERR+RAA +A S P
Sbjct: 57 ASGDGQRLEDLAESILEHGILNPITVEKVGENRYRIVSGERRYRAATIARDSGKPCARAG 116
Query: 116 VD-------------NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
D ++ LE+ +VEN+ R+D++ + A L+ G ++ D+ +
Sbjct: 117 YDLTKIPAIVIQTQGGQNRLEMQLVENIAREDMSDDDIAEALHILMDTCGMSKADVARRL 176
Query: 163 GKSRSHVANI 172
G+ R+ V+ I
Sbjct: 177 GRDRAWVSRI 186
>gi|329117971|ref|ZP_08246684.1| ParB family protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327465859|gb|EGF12131.1| ParB family protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 539
Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 87/257 (33%), Gaps = 13/257 (5%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
LI + Q+ +K E P +S+ I NPR + E + +S++ GI
Sbjct: 23 LIPQPAQTSMDIGRKEEMFPGLFINVSVAEIDFFDKNPRTRHDPELYRQIKESVRESGIQ 82
Query: 77 QP-LIVRAIDNGLYKIIAGERRFRAAKMASLSEV---------PVIIRNVDNKSSLEIAI 126
QP I R + + + G L+E + +
Sbjct: 83 QPVHITRRPGSSRFLLSQGGNTRLKIMQELLAETGDARFAEIPAIYTEYTSEADIQIAHL 142
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN QR ++ ++A Y + + S+ + + L + + +
Sbjct: 143 IENEQRAEMCFWDKAQAYAAVREMFQSQSEKKLSLRELEALFLTHGLSLSYKTLGLM-LF 201
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK--RKKIFEGSR 244
+++S + ++ + + +++ ++ + + D+ + + S
Sbjct: 202 AADKLSELQQQAADLSNPKAFELRKLFNQQQALSEQNGFAERFDSFWHSSLSEWSAKHSD 261
Query: 245 EKEKYLTDLEKKISSKV 261
E L LEK + +
Sbjct: 262 ASELNLPALEKFLQQRF 278
>gi|330984066|gb|EGH82169.1| putative partitioning protein [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 312
Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 2/132 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ I + E + + PNP R F E +EDL + I+ +G +Q
Sbjct: 13 LAAQYSGISKTIDEQPRQGEEIVDLDPSRVDPNPFQYRIRFNIETVEDLGKKIRRNGQMQ 72
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
I Y+II GE R+RA + L V I+R ++ + EN R +
Sbjct: 73 -PIGVRKAGDRYQIIWGEHRWRACTLEKLR-VKAIVREATDEEMASLCFGENNDRSNPTA 130
Query: 138 LEEALGYEQLIS 149
E+
Sbjct: 131 FEDYNAIAIQRR 142
>gi|153930577|ref|YP_001393297.1| transcription repressor protein KorB [Yersinia pseudotuberculosis
IP 31758]
gi|152958121|gb|ABS45584.1| transcription repressor protein KorB [Yersinia pseudotuberculosis
IP 31758]
Length = 350
Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 99/263 (37%), Gaps = 18/263 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY--- 57
M++ K L GL A IG+++ + P S + ++ I +P+ PR
Sbjct: 1 MTSKEKKSSL--GLDA-IGDLSSLL----AGKGPSPTSPIDLDMNLIDEDPNQPRTEENP 53
Query: 58 -FESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIR 114
F + L +L ++I+ G+ P+ VR + Y I G RR RA+K+A +P I
Sbjct: 54 GFSIQSLNELAETIRQRGVKTPISVRDNPDSPGRYLINHGARRMRASKIAQKKTIPGFI- 112
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+ EI V +++ E + G + I +G S + V+ +
Sbjct: 113 ---DNDYNEIDQVIENLQRNELTAREIADFIGRELAKGKKKGVIAKELGVSAAFVSQHVT 169
Query: 175 ILKLPSSVREMIRKEEISL-GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKK 233
+L LP ++ + I LV+ + A + + V+
Sbjct: 170 LLDLPDAIAKAFNSGRIKDVTVINELVTAFKKNAKAVTSWLEDEDQEISRGSVKLLREFI 229
Query: 234 EKRKKIFEGSREKEKYLTDLEKK 256
+ + + + L +++
Sbjct: 230 DNKNDDSNSNISSDTDLVSEDER 252
>gi|187931308|ref|YP_001891292.1| chromosome partition protein B [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712217|gb|ACD30514.1| chromosome partition protein B [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 304
Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + + I PN + PR F + ++ L SIK +G+IQP+IV A
Sbjct: 34 QELNEQASKVGQLFELPLTIIKPNANQPRKTF--KNIDSLADSIKENGVIQPIIVTAKKA 91
Query: 87 G-LYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
++ IIAGERR+ A+K A L+ +P I + + + + + ++EN QR++++P EEA
Sbjct: 92 NGIHYIIAGERRYLASKQAGLTTIPCIVRQEESDANIVLLQLLENDQRENVSPFEEADAL 151
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
LI ++DI I+G+ S ++ L+I + +RE
Sbjct: 152 RDLIENKDVKKSDIAKILGRDNSWISMRLKIADANADIRE 191
>gi|259419382|ref|ZP_05743298.1| ParB domain protein nuclease [Silicibacter sp. TrichCH4B]
gi|259344623|gb|EEW56510.1| ParB domain protein nuclease [Silicibacter sp. TrichCH4B]
Length = 723
Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 75/213 (35%), Gaps = 14/213 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ ++ + + ++ T I + + P+P N R S
Sbjct: 1 MAKTTTRPK---------PATAKKTEATGTATPDGAADIRMIPLDQLEPSPLNVRKVAAS 51
Query: 61 EGLE-DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRN 115
+ +L SI+ GI Q L+V A+ + + AG RR + A + +
Sbjct: 52 ASDDAELLASIRETGIKQNLVVHALSETRFAVDAGGRRLKALKQLANEGVIPADHPVPCL 111
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
V+++ + + ++ + + G ++++I G S V L++
Sbjct: 112 VEDERNAILTSATENLQRAAMHPADQFEAFDKMIGEGRSEDEIALKFGVSVDLVRRRLKL 171
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
++ + E R +++L T D
Sbjct: 172 ARVAPEIIEQFRSGDLTLECVMAFTLTDDHDRQ 204
>gi|254003181|ref|YP_003052647.1| parB-like partition protein [Methylovorus sp. SIP3-4]
gi|253987264|gb|ACT52120.1| parB-like partition protein [Methylovorus sp. SIP3-4]
Length = 371
Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 23/232 (9%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYF----------ESEGLEDLCQSIKSHGIIQPL 79
+ +T ++ I+I +I P+PH PR + E LE+L IK G++QP+
Sbjct: 19 QSLDTADQTVQEIAIDTIEPDPHQPRQTWHSSDGIVPAEEQTALENLASDIKEQGVMQPI 78
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPL 138
IVR I +G Y II GERR+RA+K+A + +P IIR + ENVQR++++ L
Sbjct: 79 IVREIGSGKYMIIIGERRWRASKLAGRTTIPAIIRQDLTGVKVALAQLAENVQRENMSDL 138
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
+ A ++++ + K PS V M+ + H +
Sbjct: 139 DTARFVKRMLE------------ENSELQKRDLAQLLNKNPSYVSRMMAFIDPRWAHVVS 186
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYL 250
S L Q + E +E+ + + EKEK +
Sbjct: 187 TGIISFASVLEQFRALPETVQDKLVETAKERGSPIMAHEVHAAKRAEKEKDI 238
>gi|225872864|ref|YP_002754321.1| putative partition protein [Acidobacterium capsulatum ATCC 51196]
gi|225793564|gb|ACO33654.1| putative partition protein [Acidobacterium capsulatum ATCC 51196]
Length = 529
Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 7/228 (3%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
T + + S+ +P NPR F+ L +L +SI++ GI+ PL+VR Y+I
Sbjct: 2 TTATQSEYRNLPVISLTESPTNPRQVFDETSLNELAESIRAQGILSPLVVRPKGQHTYEI 61
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
+AG RR+RAA+ A L VPV I + + ++E++IVEN+QR+D++PL+EA GY L+
Sbjct: 62 VAGARRYRAAQRAGLEYVPVRIAELSDAQAVEVSIVENLQRRDVHPLDEANGYVALMRL- 120
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL--- 208
YT I + GKS ++V R+ +L +V E K+EI +GHA L
Sbjct: 121 DYTVEQIAAKCGKSPAYVTARTRLAQLAPAVAEAFAKDEIGVGHALLLAKLQPDEQQEAL 180
Query: 209 -AQVIVSKKMSVRDTEEL--VQEQDNKKEKRKKIFEGSREKEKYLTDL 253
A + L V+ E + + K L
Sbjct: 181 AACWQQGYTNGSKAKRILLPVRHLQQWIEHNILLELAAAPFPKDDAQL 228
>gi|148550635|ref|YP_001260074.1| ParB family protein [Sphingomonas wittichii RW1]
gi|148503054|gb|ABQ71307.1| ParB family protein [Sphingomonas wittichii RW1]
Length = 549
Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 5/179 (2%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YK 90
T S + + IV NPR YF+ + +DL SI+ GI+QP++VR + Y
Sbjct: 2 STPEPSCATLPLSRIVKG-DNPRRYFDRKKHDDLVASIRIRGILQPILVRPAPSSDDSYA 60
Query: 91 IIAGERRFRAA--KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
I+AGERR+RAA S EVP IIR + ++ +LE AI EN R D + E+A +++
Sbjct: 61 IVAGERRYRAALEAFGSDGEVPAIIREMTDQEALEAAIDENDNRDDASETEQADAAVRVL 120
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ + + +G SR+ + L + +L +V+ + + I +GHA L +
Sbjct: 121 AACRNDRAEAARRLGWSRAKLDRRLALAELSEAVKLALDERRIKVGHAELLAAIPADKQ 179
>gi|304412926|ref|ZP_07394486.1| plasmid partition protein ParB-like [Candidatus Regiella
insecticola LSR1]
gi|304284420|gb|EFL92812.1| plasmid partition protein ParB-like [Candidatus Regiella
insecticola LSR1]
Length = 374
Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/240 (20%), Positives = 86/240 (35%), Gaps = 23/240 (9%)
Query: 1 MSNNYSKRRLG-RGLA---ALIGEVNQSIDSPEKK--TETIPESQDCISIHSIVPNPHNP 54
MS +K+ L GL AL+G S E + + + I + N
Sbjct: 1 MS---AKKGLDLSGLDNFSALMGGAPALTQSAASTDVPEGFAGNLIRVPLKKIHKDADNA 57
Query: 55 RNYFESEGLEDLCQSIKS----------HGIIQPLIVRAIDNGLYKIIAGERRFRAAKMA 104
R + L +L S+KS + L G Y + AGERR AA++A
Sbjct: 58 RKTIDPHELRELADSMKSVNPATGKPRGNKNPVSLKPHPDIPGEYILNAGERRCAAAELA 117
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
L +V I ++ + ++ V + E + Q E G ++ I + +GK
Sbjct: 118 ELPDVLAFIDEDADEFDNAVDNIQRVALSPI----ETATFIQRRIEKGDKKSAIAARLGK 173
Query: 165 SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEE 224
S V++ + + +R+M + A L+ + +V + +
Sbjct: 174 PASFVSDHIIFFDMADCIRDMYDSGRVVSMQAMALLHRAYKKHAEEVEAFCSEAQDELTT 233
>gi|291548117|emb|CBL21225.1| ParB-like partition proteins [Ruminococcus sp. SR1/5]
Length = 304
Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 72/137 (52%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ V + E++ + E ISI+ I P++P + + + +S++ HG++
Sbjct: 3 LPSVADLFTTQEERDQKNQEYVKDISIYEITDFPNHPFKVKMDDKMLETIESVRDHGVLV 62
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P +VR G Y++I+G RR A+++A +P I+RN+ + ++ + + N+QR+++ P
Sbjct: 63 PALVREKPTGGYEMISGHRRKMASELAGKETMPCIVRNLSDDQAVIVMVDSNLQREEILP 122
Query: 138 LEEALGYEQLISEYGYT 154
E+A Y+ +
Sbjct: 123 SEKAFAYKMRLEAMKRQ 139
>gi|10956769|ref|NP_061714.1| plasmid replication/partition protein [Xylella fastidiosa 9a5c]
gi|12230470|sp|Q9PHE9|PARB2_XYLFA RecName: Full=Probable plasmid-partitioning protein parB
gi|9112296|gb|AAF85627.1|AE003851_58 plasmid replication/partition protein [Xylella fastidiosa 9a5c]
Length = 401
Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 18/238 (7%)
Query: 9 RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEG--LEDL 66
LG G+ AL + I + I R FE E LEDL
Sbjct: 36 ALGAGIDALFAD--------------QGAQYSLIPLDMIQV-KTQIRESFEDEENTLEDL 80
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SIK G++QP+++R+ G Y++IAGERR+RA+K+A L ++P IR + ++ + + +
Sbjct: 81 AASIKVRGVLQPILLRSNSEG-YELIAGERRYRASKLAGLEQIPAYIREMSDEEAEDAQM 139
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
EN+ RK+L +EEA ++ + + G + + + + R +I
Sbjct: 140 AENIHRKNLTQIEEAKKIQRDLDKLGSVDAVLEKHQKSRPWLSKMLALLNLPEQAKRLVI 199
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ T+ + + + +E +++ ++ K + +
Sbjct: 200 ENVSADVEVINTVKMVEKINPVKAKELVDDLKKTRGKENARDKAAAVKEEVKPSKKPK 257
>gi|134290912|ref|YP_001114681.1| ParB family protein [Burkholderia vietnamiensis G4]
gi|134134101|gb|ABO58426.1| ParB family protein [Burkholderia vietnamiensis G4]
Length = 343
Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 89/220 (40%), Gaps = 34/220 (15%)
Query: 1 MSNNYSKR-----------RLGRGLA----AL---IGEVNQSIDSPEKKTETIP------ 36
M+ + SK L RGLA AL + E + + ++ I
Sbjct: 1 MAKDTSKEKKPTGNLHLAAGLLRGLAQENAALETRLPEPSAASNTAVDAALAIAPTVTTP 60
Query: 37 ------ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ +++ +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 TDTPDLGAPQKVAVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGK 120
Query: 91 --IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+I G+RR R + + + + IA N + ++A+ +++L
Sbjct: 121 LVVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRL 180
Query: 148 ISEYGYTQNDI-GSIVGKSRSHVANILRILKLPSSVREMI 186
+ E + + +GK ++ ++ L + LP+++ E +
Sbjct: 181 LDEKVFPDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 220
>gi|218442560|ref|YP_002380881.1| parB-like partition protein [Cyanothece sp. PCC 7424]
gi|218175331|gb|ACK74062.1| parB-like partition protein [Cyanothece sp. PCC 7424]
Length = 311
Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/114 (41%), Positives = 76/114 (66%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
+ + + +I + PR YF+ L DL +I + GI++PLIVR + + Y+++
Sbjct: 24 PKTENNYRILPLSAIALPFYQPRQYFDEASLIDLSSAIATMGILEPLIVRPLTSSNYQLV 83
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
AG RR+RAA+ A LSEVPVII+++ + +LE++I+EN+QR+DLNP+EE G +
Sbjct: 84 AGGRRYRAAQKAGLSEVPVIIKDLSDSQALEVSILENLQREDLNPVEETEGILR 137
>gi|229827118|ref|ZP_04453187.1| hypothetical protein GCWU000182_02503 [Abiotrophia defectiva ATCC
49176]
gi|229788736|gb|EEP24850.1| hypothetical protein GCWU000182_02503 [Abiotrophia defectiva ATCC
49176]
Length = 306
Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 98/250 (39%), Gaps = 15/250 (6%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
I + I P++P + + + L SI+ +GI+ P+IVR NG Y++I+G R
Sbjct: 24 AGTQEIDVRRIHSFPNHPFKVVDDDRMNTLIDSIRENGILNPVIVRPDKNGDYEMISGHR 83
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R AA + L ++P I++ + + ++ + N+QR+++ P E A + +
Sbjct: 84 RLHAAGIVGLDKIPAIVKEMSDDEAIIKMVDANIQREEILPSERAFSLKMKMDAMRRQGA 143
Query: 157 DI---GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
I G+ + I+ ++ + I L + L + +
Sbjct: 144 RIDIDGTCCTECDKLGKKTAAIVGDQVGLKARQVHKYIRLTDLIPEIIDFIDLKKITIAM 203
Query: 214 SKKMSV--RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK-----ISSKV----- 261
+S + ++ V E K + + + ++++ + ++ +
Sbjct: 204 GVDISYLDKQIQQWVYEYYRDNGFLKPLQVEALKNSPAISNINQFKVISILNEALPQKST 263
Query: 262 GLNISIKHRN 271
G IS +
Sbjct: 264 GAKISFSEKK 273
>gi|153854532|ref|ZP_01995802.1| hypothetical protein DORLON_01797 [Dorea longicatena DSM 13814]
gi|149752841|gb|EDM62772.1| hypothetical protein DORLON_01797 [Dorea longicatena DSM 13814]
Length = 303
Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 72/141 (51%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E++ + E ISI+ I P++P + + + +S++ HG++
Sbjct: 3 LPSADDLFTTQEERDQKNQEYVKNISIYEITDFPNHPFKVKMDDKMLETIESVRDHGVLV 62
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P +VR G Y++I+G RR A+++A +P I+RN+ + ++ + + N+QR+++ P
Sbjct: 63 PALVREKPTGGYEMISGHRRKMASELAGKETMPCIVRNLSDDQAVIVMVDSNLQREEILP 122
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E+A Y+ +
Sbjct: 123 SEKAFAYKMKLEVMKRQGQRT 143
>gi|322420400|ref|YP_004199623.1| parB-like partition protein [Geobacter sp. M18]
gi|320126787|gb|ADW14347.1| parB-like partition protein [Geobacter sp. M18]
Length = 257
Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 52/162 (32%), Positives = 94/162 (58%), Gaps = 3/162 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K+ IS+ + P+ PR + + LEDL SI++HG + I+ + +
Sbjct: 6 KEATYKKGKLYSISLTDLTPDTDQPRKHIDESELEDLKLSIQAHGQL-SPILFRVGDKGL 64
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
+++GERR+RA ++ L + + +D + EIA+V+NVQR DL+P++EA L +
Sbjct: 65 VLVSGERRYRACQL--LGKTHISGIFLDAEKHDEIALVDNVQRIDLHPVDEAEAVYNLKT 122
Query: 150 EYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
+YGYTQ +G++VGK+++ +++IL ++ L +RE R +
Sbjct: 123 KYGYTQVQLGNLVGKAQNTISDILGLMALSDDIREDARHRKE 164
>gi|325914605|ref|ZP_08176946.1| hypothetical protein XVE_0817 [Xanthomonas vesicatoria ATCC 35937]
gi|325539107|gb|EGD10762.1| hypothetical protein XVE_0817 [Xanthomonas vesicatoria ATCC 35937]
Length = 163
Score = 50.8 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 37/106 (34%), Gaps = 7/106 (6%)
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
++ + L + +++ S V + ++ + K+
Sbjct: 60 KLKHVEYVLALRADLAEELLRRAMARGWSTETLRREVMKAKGRRLLEE------ASKDPN 113
Query: 250 LTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLKIICSLLG 294
+ LE+K++ G ++I+ R G + N+ L + +G
Sbjct: 114 VASLERKLTDTFGSGVTIETRPGMGGTLTFSFTDNDVLDGLLEQMG 159
>gi|119489111|ref|ZP_01622017.1| ParB-like partition protein [Lyngbya sp. PCC 8106]
gi|119454860|gb|EAW36004.1| ParB-like partition protein [Lyngbya sp. PCC 8106]
Length = 300
Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 81/140 (57%), Gaps = 12/140 (8%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
KR L A +G + + E + + +IV PR YF+ + ++
Sbjct: 1 MVKRG---NLKAFLGMDIPTDST---------EGDSTLPLSAIVLPASQPRRYFDEDKIK 48
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
L SI +G+++P++VR + G Y+++AGERR+RA ++ L +PV+IR + N+ +L +
Sbjct: 49 QLSASIAEYGLLEPILVRPVQGGKYELVAGERRYRAVQLLKLESIPVVIRELSNEEALAV 108
Query: 125 AIVENVQRKDLNPLEEALGY 144
+++EN++R+DLNP+EE G
Sbjct: 109 SLIENLEREDLNPIEETEGV 128
>gi|251796751|ref|YP_003011482.1| parB-like partition protein [Paenibacillus sp. JDR-2]
gi|247544377|gb|ACT01396.1| parB-like partition protein [Paenibacillus sp. JDR-2]
Length = 344
Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ ++ I + PR F+ E L +L ++I+ G++ P+ VR ID G YKII G RR+
Sbjct: 3 IVQLPLNQIDEDTDQPRYQFDEEALVELMRNIEEIGLLSPIKVRTIDGGRYKIIYGNRRY 62
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLE-IAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
+A K L +P I+ N+ ++ + I EN+ R+ +P+EEA + +L+++ ++++
Sbjct: 63 KACKRLELDTIPCIVTNMTDEQEIYLEQIAENLTRQGFSPIEEAEAFNKLMTDPKFSRSV 122
Query: 158 IGSIVGKSRSHVA 170
+
Sbjct: 123 KFLASKFGKPESY 135
>gi|313669534|ref|YP_004049959.1| parB-like partition protein [Sulfuricurvum kujiense DSM 16994]
gi|313156731|gb|ADR35406.1| parB-like partition protein [Sulfuricurvum kujiense DSM 16994]
Length = 282
Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 6/232 (2%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
P++ T E+ I I ++ NP PR +S L +L QSI+ +G++QP++V + NG
Sbjct: 26 PKQITIDGSETHADIEISKLIHNPFQPRIEMDSNELSELVQSIEKNGLLQPILVTSNHNG 85
Query: 88 LYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
Y I+AG RR A K+ ++P + +V + AI EN R DLNP+E A+ +
Sbjct: 86 KYTILAGHRRAEAFKILGKEKIPCMLKNDVSRQDMAVFAIAENAVRVDLNPIEFAISMQH 145
Query: 147 -LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA----RTLVS 201
L +QN + +G S+ HV+ I+ ILKLPS++ +M++++ ++ + +
Sbjct: 146 LLDEGVVESQNKLAEHIGLSKGHVSKIMGILKLPSNIIKMVKEDNYNIVYILSILNKVAP 205
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
+ ++ + + K IF+ + K+K D+
Sbjct: 206 DKIKSAYEEIKSLGRDDAESVLKTKYLSKGKDTATLPIFKAKQTKDKIKIDI 257
>gi|239621762|ref|ZP_04664793.1| predicted protein [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|239514953|gb|EEQ54820.1| predicted protein [Bifidobacterium longum subsp. infantis CCUG
52486]
Length = 470
Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA----IDNGLYKIIA 93
+ I + ++PNPHNPR + + +L SI++ GI Q L+V +Y+++
Sbjct: 4 TIVDIPVSQLMPNPHNPRR--DVGDVTELADSIRAQGIKQELLVTPSGDRDGRPMYRVVI 61
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
G RR AAK+A L VP + + + E+ +VEN QR DL PLEEA GY+
Sbjct: 62 GHRRLAAAKIAGLDMVPCRVEELSAREERELMLVENTQRVDLTPLEEADGYQ 113
>gi|86159688|ref|YP_466473.1| ParB family protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85776199|gb|ABC83036.1| ParB family protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 565
Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ P + I I P+P N R +++L S++ HGI QP+ V
Sbjct: 9 KTKPAVKPRPAGLEPVPVRLVPIDDIDPSPRN-RTARN---IDELVASVREHGIQQPIKV 64
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP---- 137
R + ++I+ GERR+RAAK+A L EVP + ++ ++ + E+ IVEN R+D +P
Sbjct: 65 RPKGSR-FEIVYGERRYRAAKLAGLKEVPATVEDLTDEEAHELRIVENACREDPHPVEEA 123
Query: 138 --LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
E L + +T + + +VG+S +V + L++ L ++R+ K E++
Sbjct: 124 EAYEALLAMKDGRGRPLHTADTLAKLVGRSPQYVYSRLKLTALGPAMRDAFWKGELTTTT 183
Query: 196 A 196
A
Sbjct: 184 A 184
>gi|197302488|ref|ZP_03167543.1| hypothetical protein RUMLAC_01216 [Ruminococcus lactaris ATCC
29176]
gi|197298386|gb|EDY32931.1| hypothetical protein RUMLAC_01216 [Ruminococcus lactaris ATCC
29176]
Length = 303
Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 71/141 (50%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ + + E++ E ISI+ I P++P + + + S++ HG++
Sbjct: 3 LPSADDLFTTQEERNHKNQEYVKNISIYEITDFPNHPFKVKMDDKMLETIDSVRDHGVLV 62
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P +VR G Y++I+G RR A+++A +P I+RN+ + ++ + + N+QR+++ P
Sbjct: 63 PALVREKPTGGYEMISGHRRKMASELAGFENMPCIVRNLSDDEAVIVMVDSNLQREEILP 122
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E+A Y+ + +
Sbjct: 123 SEKAFAYKMKLEAMSRQGKRL 143
>gi|58616541|ref|YP_195671.1| plasmid partition-associated transcriptional repressor protein
[Azoarcus sp. EbN1]
gi|56316004|emb|CAI10647.1| plasmid partition-associated transcriptional repressor protein
[Aromatoleum aromaticum EbN1]
Length = 347
Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/262 (18%), Positives = 94/262 (35%), Gaps = 19/262 (7%)
Query: 3 NNYSKR------RLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRN 56
N K+ G GL + IG+++ ++ PE + + I +P PR
Sbjct: 5 KNAKKKVVEQPRASGLGLDS-IGDLSGLLNEPESVAR--GAGPLELPLELIDEDPDQPRT 61
Query: 57 Y----FESEGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVP 110
F E + ++ Q+IK G+ P+ VR Y I G RR+R ++ A + +P
Sbjct: 62 ADNPGFSRESIAEIGQTIKYRGVKSPISVRENPQAEGRYIINHGARRYRGSQWAERATIP 121
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
I + V +++ E + G +++I +GKS + V
Sbjct: 122 AFI----DNDYNHADQVIENLQRNELTPREIADFIGRELATGKKKSEIAREIGKSPAFVT 177
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
+ +L LP + + + + T+ + +V V ++ +
Sbjct: 178 QHVTLLDLPDPIAKAFNTGRANDVTVVNELVTAFKKNPQEVGVWLADDSQELTRGSVKLL 237
Query: 231 NKKEKRKKIFEGSREKEKYLTD 252
+ + K+ E D
Sbjct: 238 REFLEDKRRHGDEDEFNPNTAD 259
>gi|23011671|ref|ZP_00051962.1| COG1475: Predicted transcriptional regulators [Magnetospirillum
magnetotacticum MS-1]
Length = 151
Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ E+ YTQ ++ ++GKSRSH+AN LR+L+LP +++ + EI+ GH R L+S DP +
Sbjct: 1 MGEFQYTQAELADLLGKSRSHLANTLRLLQLPPQIQDRVIAGEITAGHGRALLSVRDPET 60
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKE-KRKKIFEGSREKEKYLTDLEKKISSKVGLNIS 266
+A+ IV++ +SVR+ E L + + R S + + L LE + +G +++
Sbjct: 61 VARRIVAEGLSVREVEALAAAEAPIDDAPRPGRPRRSPDSDTTLRSLEDVLGRALGYSVA 120
Query: 267 IKHR-NNKGQFCIKYETNEQLKIICSLLG 294
+K + + +G+ I+Y + E+ +C LG
Sbjct: 121 VKAKASGEGEIRIRYASVEERDALCRKLG 149
>gi|205320867|gb|ACI02981.1| KorB [uncultured bacterium HHV35]
Length = 346
Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 88/248 (35%), Gaps = 15/248 (6%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+AL + I + I+ +P PR F + ++ + +SIK+
Sbjct: 4 LSAL------EGIDLGNSAPVADGTPKQIPLTDILEDPDQPRVEFPEDQMQKMVESIKAR 57
Query: 74 GIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+ P+ V+ + I G RRFRA+ MA +P + N + + E +
Sbjct: 58 GVKTPISVKPHPTEQGKWIINYGARRFRASVMAGKETIPAFVDNDHDDYDQVMENKERLN 117
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
+ + Q + G +N I + + ++ L ++ +P + +
Sbjct: 118 HSPIELAL----FIQKKIKQGEKKNVIAKKLNEDPVFISTHLALVDMPECLSKAYDAGFK 173
Query: 192 SLGHARTLV---STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
S L + A V S + VQ K ++ K+ ++E
Sbjct: 174 SPKTLYDLRKLWESFPEEVNAWVDESLENGQDIIRSRVQALSKKLKEPKQAEATEVDQEP 233
Query: 249 YLTDLEKK 256
+ +++
Sbjct: 234 QAQESQEQ 241
>gi|87200213|ref|YP_497470.1| ParB family protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135894|gb|ABD26636.1| ParB family protein [Novosphingobium aromaticivorans DSM 12444]
Length = 662
Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 13/231 (5%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
I ++ +V +P N R + + +L SI +HG++Q LIVR G +++ AGERR
Sbjct: 2 IKSIPLNKLVQSPRNVRRHTDPAADAELKASIAAHGLLQNLIVRPAAKGKFEVEAGERRR 61
Query: 99 RAA-------KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
R +A EV ++ ++++E ++ EN R +NP +EA + L++
Sbjct: 62 RVMLALTDEKILARDHEVTCLVLADSAEAAVETSLAENFHRLAMNPADEAQAFAALVAGG 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
T D+ G + V LR+ L V E + EI+L A+ +TSD A+V
Sbjct: 122 A-TVEDVARRFGLTIRFVDGRLRLANLAPVVFEALASGEITLDIAKAFGATSDQDIQARV 180
Query: 212 IVS--KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD---LEKKI 257
+ + + + + + ++ Y+ +E+++
Sbjct: 181 FEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIEREL 231
>gi|163816240|ref|ZP_02207607.1| hypothetical protein COPEUT_02428 [Coprococcus eutactus ATCC 27759]
gi|158448435|gb|EDP25430.1| hypothetical protein COPEUT_02428 [Coprococcus eutactus ATCC 27759]
Length = 301
Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
L G ++ I + S+ ++P + LE++ +S++ +G
Sbjct: 16 DDLFGTNENL-----EQANANGGEIREIPLASLHTFRNHPFQ-IHEDKLEEMVESVRQYG 69
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
++ P I R G Y+IIAG R A ++A L +P+ IRN+++ + + + N+QR+D
Sbjct: 70 VLVPGIARMRPQGGYEIIAGHTRKAACELAGLDTMPMFIRNLNDDEATIVMVDSNIQRED 129
Query: 135 LNPLEEALGYEQLISEYGYT 154
+ P E+A Y +
Sbjct: 130 IFPSEKARAYSMRYYAMKHQ 149
>gi|160895074|ref|ZP_02075848.1| hypothetical protein CLOL250_02624 [Clostridium sp. L2-50]
gi|156863505|gb|EDO56936.1| hypothetical protein CLOL250_02624 [Clostridium sp. L2-50]
Length = 301
Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
L G ++ I + S+ ++P + LE++ +S++ +G
Sbjct: 16 DDLFGTNENL-----EQANANGGEIREIPLASLHTFRNHPFQ-IHEDKLEEMVESVRQYG 69
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
++ P I R G Y+IIAG R A ++A L +P+ IRN+++ + + + N+QR+D
Sbjct: 70 VLVPGIARMRPQGGYEIIAGHTRKAACELAGLDTMPMFIRNLNDDEATIVMVDSNIQRED 129
Query: 135 LNPLEEALGYEQLISEYGYT 154
+ P E+A Y +
Sbjct: 130 IFPSEKARAYSMRYYAMKHQ 149
>gi|266621883|ref|ZP_06114818.1| putative stage 0 sporulation protein J [Clostridium hathewayi DSM
13479]
gi|288866415|gb|EFC98713.1| putative stage 0 sporulation protein J [Clostridium hathewayi DSM
13479]
Length = 297
Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 67/126 (53%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
E ++ +S+ + ++P + E + + S++ +G++ P +VR G
Sbjct: 21 ESIEQSAEGQVIHLSLDILHSFKNHPFRVLDDEKMMETVDSVRKYGVLIPGVVRKDKQGG 80
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
Y+I+AG RR RA ++A ++PVI+R++++ + I + N+QR+DL P E+A Y +
Sbjct: 81 YEIVAGHRRKRACELAGYQDMPVIVRDLNDDEATIIMVDSNIQREDLLPSEKAKAYRMKM 140
Query: 149 SEYGYT 154
+
Sbjct: 141 EALSHQ 146
>gi|298501411|ref|YP_003723408.1| ParB-like partition protein ['Nostoc azollae' 0708]
gi|298235151|gb|ADI66285.1| parB-like partition protein ['Nostoc azollae' 0708]
Length = 385
Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
IS+ I NP PR F SE ++ + +S+ S G ++P+I+ + I
Sbjct: 59 QSQSGIQSISLERIQANPEQPRQTFLSESIDSMSRSLVSDGQLEPIILIQRE--HLVIFD 116
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
GERR+R+AK S + +I + A++ ++ R++LNPL++A
Sbjct: 117 GERRWRSAKNLSWENLQAVIIPEPDA-LHRKALITSLHREELNPLDKAEAI 166
>gi|153813037|ref|ZP_01965705.1| hypothetical protein RUMOBE_03445 [Ruminococcus obeum ATCC 29174]
gi|149830839|gb|EDM85929.1| hypothetical protein RUMOBE_03445 [Ruminococcus obeum ATCC 29174]
Length = 122
Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 49/91 (53%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
E+ E I + + P ++P + + E + + +SIK++G++ P +VR G
Sbjct: 20 EETPEKSMNQVVEIDLAKLYPFKNHPFHVNDDEKMAETVESIKTYGVLTPALVRPRSEGG 79
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
Y++I+G RR R ++ + +PV++RN +
Sbjct: 80 YEMISGHRRKRGCELCGKTTMPVLVRNYTDD 110
>gi|78060851|ref|YP_367426.1| ParB family protein [Burkholderia sp. 383]
gi|77965401|gb|ABB06782.1| ParB family protein [Burkholderia sp. 383]
Length = 343
Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 34/220 (15%)
Query: 1 MSNNYSK-----------RRLGRGLA----AL-------------IGEVNQSIDSPEKKT 32
M+ + SK L RGLA AL GE + E
Sbjct: 1 MAKDTSKDKKPTGNLHLAAGLLRGLAQENAALETRLPEPAAAPNAAGETATASAPAEATP 60
Query: 33 ETIP--ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
P + +S+ +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 AGTPDLGAPQKVSVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGK 120
Query: 91 --IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+I G+RR R + + + + IA N + ++A+ +++L
Sbjct: 121 LVVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRL 180
Query: 148 ISEYGY-TQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+ E + QN + +GK ++ ++ L + LP+++ E +
Sbjct: 181 LDEKVFSDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 220
>gi|103485921|ref|YP_615482.1| parB-like partition proteins [Sphingopyxis alaskensis RB2256]
gi|98975998|gb|ABF52149.1| ParB family protein [Sphingopyxis alaskensis RB2256]
Length = 662
Score = 50.1 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 13/231 (5%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
I ++ +V +P N R + + +L SI + G++Q LIVR +++ AGERR
Sbjct: 2 IKSIPLNKLVQSPRNVRRHSDPASDAELKASIAACGLLQNLIVRPTAKAKFEVEAGERRR 61
Query: 99 RAA-------KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
RA +A EV ++ + ++E ++ EN R +NP +EA + L++
Sbjct: 62 RAMLALADEKILARDHEVTCLVLEDSAEVAVETSLAENFHRLAMNPADEAQAFAALVAGG 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
T D+ G + V LR+ L V E + EI+L A+ +TSD A+V
Sbjct: 122 A-TVEDVARRFGLTVRFVDGRLRLANLAPVVFEALASGEITLDIAKAFGATSDQDIQARV 180
Query: 212 IVS--KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD---LEKKI 257
+ + + + + + ++ Y+ +E+++
Sbjct: 181 FEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIEREL 231
>gi|291531150|emb|CBK96735.1| ParB-like partition proteins [Eubacterium siraeum 70/3]
Length = 308
Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
SN +K +L GL+ + + +S I + I +P + +++
Sbjct: 6 SNIKAKGKLN-GLS-------------FYSSVSDNDSVHEIPLDLIDSFEGHPFSVIDND 51
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
+ L +S+K +GI+ P IVR +G Y++I+G RR RA ++ L + ++ + ++ +
Sbjct: 52 DMIQLTESVKHNGIMNPAIVREKGSGRYELISGHRRKRACELVGLETLKAYVKQLTDEEA 111
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLI 148
I + N+QR+ + P E A Y+
Sbjct: 112 TIIMVDSNLQREKILPSERAFAYKMKY 138
>gi|255100631|ref|ZP_05329608.1| hypothetical protein CdifQCD-6_07447 [Clostridium difficile
QCD-63q42]
Length = 484
Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 46/257 (17%), Positives = 103/257 (40%), Gaps = 25/257 (9%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
T E +++ + P +P + ++ L +S+K+ G+ QP +VR + G Y
Sbjct: 191 DATRAEKEEIVYLNLSELHPFQDHPFGVRDDAEMQGLVESVKAAGVNQPALVRPREGGGY 250
Query: 90 KIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN-VQRKDLNPLEEALGYEQLI 148
+IIAG RR RA+++A S +P I+R + + ++ +N R+ + P E+A +Q +
Sbjct: 251 EIIAGHRRQRASELAGFSNMPCIVRKMTDDEAILAMTDDNLRHREKILPTEKAKALKQQV 310
Query: 149 SEYGYT---------------QNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
+ +G G + V +R+ +L +++M+ +++++
Sbjct: 311 EAIKHQGARPGEDDKDAGKRSTQVVGDRNGMNYKQVQRYIRLTELVPDLKKMLDEKQLAF 370
Query: 194 GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQ--------DNKKEKRKKIFEGSRE 245
A + + + + Q+ N + E +E
Sbjct: 371 TPAVEISFIRPKHQRYIAVAIEGQQSSPSLSQAQKLRELDKQGALNGDVIDGILSEQKKE 430
Query: 246 KEKYLTDLEKKISSKVG 262
+K + + ++ G
Sbjct: 431 VDKVIIN-SVELEKYFG 446
>gi|262377742|ref|ZP_06070960.1| predicted protein [Acinetobacter lwoffii SH145]
gi|262307326|gb|EEY88471.1| predicted protein [Acinetobacter lwoffii SH145]
Length = 419
Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 125/275 (45%), Gaps = 17/275 (6%)
Query: 1 MSNNYSKRRLGRG---LAAL--IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR 55
MS +K +LG+ +A+L I N +K + + I + I +P N R
Sbjct: 1 MSK-ENKSQLGKSSTAIASLGGISGANFGNLVGKKASSNAKKENLLIKLDLIEEDPLNVR 59
Query: 56 NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVII 113
F LE L +SIK +G++ P+ VR + + I G RRFRA+++A +P I
Sbjct: 60 TIFNELQLEQLAESIKENGVLTPISVRENPDKPGHFIINNGARRFRASQIAQQETIPAFI 119
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
N ++ +++N+QR+DL+ +E A +L++ T++ + GK + V+ L
Sbjct: 120 DNEHDE---LNQMIDNIQREDLSIIEIAEKIRKLLAPGNLTKSALAKRAGKPPAWVSKHL 176
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL-----VQE 228
L++P +R + + A + + I + ++ +L V++
Sbjct: 177 NALQMPPRLRLLYDLGRCNDLEAIN-TLVNRWEDHSAEIQKWLETFEESSKLITQAGVRK 235
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
+++ + + +EK D+E++I +++
Sbjct: 236 FFKSLDEKLEKEKEEKEKNSKQIDIEEQIQAQIQA 270
>gi|115359711|ref|YP_776849.1| parB-like partition proteins [Burkholderia ambifaria AMMD]
gi|115284999|gb|ABI90515.1| ParB family protein [Burkholderia ambifaria AMMD]
Length = 353
Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 108/281 (38%), Gaps = 8/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + ++ P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESPQYRAWRLESRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP +V + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELSEHLGLDESTVAVALSIGKLPETVMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHNARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQETP-KPAGRQRYAQ 305
Query: 256 KISSKVGLNISIKHRN-NKGQFCIKYETN--EQLKIICSLL 293
++ K+G ++ + + ++ ++ I L
Sbjct: 306 RLEIKLGGKSVGDLKSYGEDRIELRLRGLPKDKRDAILEQL 346
>gi|254255147|ref|ZP_04948463.1| hypothetical protein BDAG_04474 [Burkholderia dolosa AUO158]
gi|124900884|gb|EAY71634.1| hypothetical protein BDAG_04474 [Burkholderia dolosa AUO158]
Length = 342
Score = 49.7 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 87/219 (39%), Gaps = 33/219 (15%)
Query: 1 MSNNYSK-----------RRLGRGLA----AL---IGEVNQSI-----------DSPEKK 31
M+ + SK L RGLA AL + E + S +
Sbjct: 1 MAKDTSKDKKSTGNLHLAAGLLRGLAQENAALETRLPEPSASAVAAPTVAAPMQSTAASA 60
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK- 90
+ +++ +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 DSQDLGAPQKVAVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGKL 120
Query: 91 -IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
+I G+RR R + + + + IA N + ++A+ +++L+
Sbjct: 121 VVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRLL 180
Query: 149 SEYGYTQNDI-GSIVGKSRSHVANILRILKLPSSVREMI 186
E + + +GK ++ ++ L + LP+++ E +
Sbjct: 181 DEKVFPDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 219
>gi|172062147|ref|YP_001809798.1| parB-like partition protein [Burkholderia ambifaria MC40-6]
gi|171994664|gb|ACB65582.1| parB-like partition protein [Burkholderia ambifaria MC40-6]
Length = 353
Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 107/281 (38%), Gaps = 8/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESPQYRAWRLENRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP +V + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELSEHLGLDESTVAVALSIGKLPETVMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHNARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQETP-KPAGRQRYAQ 305
Query: 256 KISSKVGLNISIKHRN-NKGQFCIKYETN--EQLKIICSLL 293
++ K+G ++ + + ++ ++ I L
Sbjct: 306 RLEIKLGGKSVGDLKSYGEDRIELRLRGLPKDKRDAILEQL 346
>gi|221199128|ref|ZP_03572173.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221205385|ref|ZP_03578401.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221175176|gb|EEE07607.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221181579|gb|EEE13981.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 341
Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 86/219 (39%), Gaps = 33/219 (15%)
Query: 1 MSNNYSKR-----------RLGRGLA----AL---IGEVNQSIDSPEKKTETIP------ 36
M+ + SK L RGLA AL I E + +
Sbjct: 1 MAKDTSKEKKPTGNLHLAAGLLRGLAQENAALETRIPEPPSAAKTGVGAAVAAAPGVTPP 60
Query: 37 -----ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK- 90
+ +++ +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 DALDLGAPQRVAVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGKL 120
Query: 91 -IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
+I G+RR R + + + + IA N + ++A+ +++L+
Sbjct: 121 VVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRLL 180
Query: 149 SEYGYTQNDI-GSIVGKSRSHVANILRILKLPSSVREMI 186
E + + +GK ++ ++ L + LP+++ E +
Sbjct: 181 DEKVFPDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 219
>gi|170699360|ref|ZP_02890407.1| parB-like partition protein [Burkholderia ambifaria IOP40-10]
gi|170135732|gb|EDT04013.1| parB-like partition protein [Burkholderia ambifaria IOP40-10]
Length = 353
Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 108/281 (38%), Gaps = 8/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESPQYRAWRLENRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP +V + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELSEHLGLDESTVAVALSIGKLPETVMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVSRYHNARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQETP-KPAGRQRYAQ 305
Query: 256 KISSKVGLNISIKHRN-NKGQFCIKYETN--EQLKIICSLL 293
++ K+G ++ + + ++ ++ I L
Sbjct: 306 RLEIKLGGKSVGDLKSYGEDRIELRLRGLPKDKRDAILEQL 346
>gi|171317230|ref|ZP_02906429.1| parB-like partition protein [Burkholderia ambifaria MEX-5]
gi|171097605|gb|EDT42440.1| parB-like partition protein [Burkholderia ambifaria MEX-5]
Length = 352
Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 107/281 (38%), Gaps = 8/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 66 DESPQYRAWRLENRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 125
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 126 HVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 185
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP +V + + G
Sbjct: 186 VFDNAVVWRRFLDDKHFQSQKELSEHLGLDESTVAVALSIGKLPETVMQEMVARPDRFGS 245
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 246 NMAYQVGRYHNARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQETP-KPAGRQRYAQ 304
Query: 256 KISSKVGLNISIKHRN-NKGQFCIKYETN--EQLKIICSLL 293
++ K+G ++ + + ++ ++ I L
Sbjct: 305 RLEIKLGGKSVGDLKSYGEDRIELRLRGLPKDKRDAILEQL 345
>gi|121609798|ref|YP_997605.1| nuclease [Verminephrobacter eiseniae EF01-2]
gi|121554438|gb|ABM58587.1| ParB domain protein nuclease [Verminephrobacter eiseniae EF01-2]
Length = 129
Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI-DNGLYKIIAGERRFR 99
++ +I P+P PR F+ E ++L S+K G++QPL++R +N Y+IIAGERR+R
Sbjct: 1 MFAVTAIRPDPEQPRTGFDQERHDNLVASMKEMGVLQPLLLRETGENPPYEIIAGERRWR 60
Query: 100 AAK 102
AAK
Sbjct: 61 AAK 63
>gi|268593685|ref|YP_003297627.1| ParB-like partition protein [Edwardsiella tarda EIB202]
gi|267986588|gb|ACY86416.1| ParB-like partition protein [Edwardsiella tarda EIB202]
Length = 405
Score = 49.3 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 95/242 (39%), Gaps = 8/242 (3%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L++ + + + + + + N R F+++ L++L +S+
Sbjct: 22 LSSFLEGGKKGKAQEDAGNAAPAGAVSYAPLDHFHEDEDNARQEFDAQRLQELAESMTQV 81
Query: 74 G---IIQPLIVRAIDNGLYKIIAGERRF----RAAKMASLSEVPVIIRNVDNKSSLEIAI 126
I+ + + G R + A L+ + + ++
Sbjct: 82 NPKTGEVRGILEPLSVKHHPDKPGHFIINGGARRYRAAKLAGLEQAPYIIKDELDDFDKF 141
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
V N QR+ L+PLE A+ + + E GY++ ++ +G+ S+V++ + + ++R++
Sbjct: 142 VLNDQREQLSPLEIAMFIKARLDE-GYSKTEVAKALGRPASYVSDHVIFFDMAGAIRDLY 200
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
E A L+ + + V + + + +EL Q + K EG +EK
Sbjct: 201 DSERCRSMQALALLHRAHKKNPEPVEAFCQDANENDQELTTSQVRAFLESLKKPEGPKEK 260
Query: 247 EK 248
++
Sbjct: 261 DE 262
>gi|221212249|ref|ZP_03585227.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221168334|gb|EEE00803.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
Length = 341
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 86/219 (39%), Gaps = 33/219 (15%)
Query: 1 MSNNYSKR-----------RLGRGLA----AL---IGEVNQSIDSPEKKTETIPESQ--- 39
M+ + +K L RGLA AL I E + + +
Sbjct: 1 MAKDTTKEKKPAGNLHLAAGLLRGLAQENAALETRIPEPSSAAKTGVDAAVAAAPGVTPP 60
Query: 40 --------DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK- 90
+++ +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 DALDLGAPQRVAVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGKL 120
Query: 91 -IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
+I G+RR R + + + + IA N + ++A+ +++L+
Sbjct: 121 VVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRLL 180
Query: 149 SEYGYTQNDI-GSIVGKSRSHVANILRILKLPSSVREMI 186
E + + +GK ++ ++ L + LP+++ E +
Sbjct: 181 DEKVFPDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 219
>gi|134302201|ref|YP_001122170.1| ParB-like nuclease [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134049978|gb|ABO47049.1| ParB-like nuclease [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 304
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + + I P+ + PR F + ++ L SIK +G+IQP+IV A
Sbjct: 34 QELNEQASKVGQLFELPLTIIKPDANQPRKTF--KNIDSLADSIKENGVIQPIIVTAKKA 91
Query: 87 G-LYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
++ IIAGERR+ A+K A L+ +P I + + + + + ++EN QR++++P EEA
Sbjct: 92 NGIHYIIAGERRYLASKQAGLTTIPCIVRQEESDANIVLLQLLENDQRENVSPFEEANAL 151
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
LI ++DI I+G+ S ++ L+I + +RE
Sbjct: 152 RDLIENKNVKKSDIAKILGRDNSWISMRLKIADANADIRE 191
>gi|161523178|ref|YP_001586107.1| parB-like partition protein [Burkholderia multivorans ATCC 17616]
gi|189348000|ref|YP_001941196.1| ParB family partition protein [Burkholderia multivorans ATCC 17616]
gi|160346731|gb|ABX19815.1| parB-like partition protein [Burkholderia multivorans ATCC 17616]
gi|189338138|dbj|BAG47206.1| ParB family partition protein [Burkholderia multivorans ATCC 17616]
Length = 341
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 86/219 (39%), Gaps = 33/219 (15%)
Query: 1 MSNNYSKR-----------RLGRGLA----AL---IGEVNQSIDSPEKKTETIPESQ--- 39
M+ + +K L RGLA AL I E + + +
Sbjct: 1 MAKDTTKEKKPTGNLHLAAGLLRGLAQENAALETRIPEPSSAAKTGVDAAVAAAPGVTPP 60
Query: 40 --------DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK- 90
+++ +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 DALDLGAPQRVAVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGKL 120
Query: 91 -IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
+I G+RR R + + + + IA N + ++A+ +++L+
Sbjct: 121 VVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRLL 180
Query: 149 SEYGYTQNDI-GSIVGKSRSHVANILRILKLPSSVREMI 186
E + + +GK ++ ++ L + LP+++ E +
Sbjct: 181 DEKVFPDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 219
>gi|194324276|ref|ZP_03058050.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|208780498|ref|ZP_03247838.1| conserved hypothetical protein [Francisella novicida FTG]
gi|194321723|gb|EDX19207.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|208743644|gb|EDZ89948.1| conserved hypothetical protein [Francisella novicida FTG]
Length = 297
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + + I P+ + PR F + ++ L SIK +G+IQP+IV A
Sbjct: 27 QELNEQASKVGQLFELPLTIIKPDANQPRKTF--KNIDSLADSIKENGVIQPIIVTAKKA 84
Query: 87 G-LYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
++ IIAGERR+ A+K A L+ +P I + + + + + ++EN QR++++P EEA
Sbjct: 85 DGIHYIIAGERRYLASKQAGLTTIPCIVRQEESDANIVLLQLLENDQRENVSPFEEADAL 144
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
LI ++DI I+G+ S ++ L+I +RE
Sbjct: 145 RDLIENKNVKKSDIAKILGRDNSWISMRLKIADADEDIRE 184
>gi|54112917|gb|AAV29092.1| NT02FT0631 [synthetic construct]
Length = 304
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + + I P+ + PR F + ++ L SIK +G+IQP+IV A
Sbjct: 34 QELNEQASKVGQLFELPLTIIKPDANQPRKTF--KNIDSLADSIKENGVIQPIIVTAKKA 91
Query: 87 G-LYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
++ IIAGERR+ A+K A L+ +P I + + + + + ++EN QR++++P EEA
Sbjct: 92 NGIHYIIAGERRYLASKQAGLTTIPCIVRQEESDANIVLLQLLENDQRENVSPFEEADAL 151
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
LI ++DI I+G+ S ++ L+I + +RE
Sbjct: 152 RDLIENKNVKKSDIAKILGRDNSWISMRLKIADANADIRE 191
>gi|153810281|ref|ZP_01962949.1| hypothetical protein RUMOBE_00662 [Ruminococcus obeum ATCC 29174]
gi|149833460|gb|EDM88541.1| hypothetical protein RUMOBE_00662 [Ruminococcus obeum ATCC 29174]
Length = 122
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 51/91 (56%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ + + ++ + P ++P + + E + + +SIK++GI+ P +VR G
Sbjct: 20 NEAEQNTLNQIVEVPLNELHPFRNHPFHVNDDEKMAETVESIKNYGILNPALVRPRAEGG 79
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
Y++IAG RR R ++A S++PV+IRN +
Sbjct: 80 YELIAGHRRKRGCELAGKSKMPVLIRNYTDD 110
>gi|158421494|ref|YP_001527721.1| ParB-like chromosome partitioning protein [Deinococcus geothermalis
DSM 11300]
gi|158342737|gb|ABW35023.1| ParB-like chromosome partitioning protein [Deinococcus geothermalis
DSM 11300]
Length = 305
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 80/137 (58%), Gaps = 6/137 (4%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGL-----EDL 66
+GL+A + + + + +++ I P NPR + E E L
Sbjct: 4 KGLSAGLAQAGAFGGRTSVADLVSGQPRSTVALQLIDPPRRNPRGLYSRERPGAESLEQL 63
Query: 67 CQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAI 126
SI++HG++QPL++R + + ++++AGERR+ AA+ A L+E+P I+R++ ++ + E+A+
Sbjct: 64 AASIRTHGVLQPLLLRPVGDR-FEVVAGERRYLAAREAGLTEIPAIVRSLSDEQAFEMAV 122
Query: 127 VENVQRKDLNPLEEALG 143
+EN QR+D+ ++ AL
Sbjct: 123 IENTQREDMPLVDLALA 139
>gi|56708009|ref|YP_169905.1| chromosome partition protein B [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89255838|ref|YP_513200.1| chromosome partition protein B [Francisella tularensis subsp.
holarctica LVS]
gi|110670480|ref|YP_667037.1| chromosome partition protein B [Francisella tularensis subsp.
tularensis FSC198]
gi|115314327|ref|YP_763050.1| chromosome partition protein B [Francisella tularensis subsp.
holarctica OSU18]
gi|167010062|ref|ZP_02274993.1| chromosome partition protein B [Francisella tularensis subsp.
holarctica FSC200]
gi|169656523|ref|YP_001427883.2| parB-like nuclease domain-containing protein [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|254367201|ref|ZP_04983231.1| chromosome partition protein B [Francisella tularensis subsp.
holarctica 257]
gi|254368668|ref|ZP_04984682.1| chromosome partition protein B [Francisella tularensis subsp.
holarctica FSC022]
gi|254370492|ref|ZP_04986497.1| chromosome partition protein B [Francisella tularensis subsp.
tularensis FSC033]
gi|290954395|ref|ZP_06559016.1| parB-like nuclease domain-containing protein [Francisella
tularensis subsp. holarctica URFT1]
gi|295312172|ref|ZP_06802977.1| parB-like nuclease domain-containing protein [Francisella
tularensis subsp. holarctica URFT1]
gi|56604501|emb|CAG45541.1| chromosome partition protein B [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89143669|emb|CAJ78868.1| chromosome partition protein B [Francisella tularensis subsp.
holarctica LVS]
gi|110320813|emb|CAL08924.1| chromosome partition protein B [Francisella tularensis subsp.
tularensis FSC198]
gi|115129226|gb|ABI82413.1| chromosome partition protein B [Francisella tularensis subsp.
holarctica OSU18]
gi|134253021|gb|EBA52115.1| chromosome partition protein B [Francisella tularensis subsp.
holarctica 257]
gi|151568735|gb|EDN34389.1| chromosome partition protein B [Francisella tularensis subsp.
tularensis FSC033]
gi|157121583|gb|EDO65760.1| chromosome partition protein B [Francisella tularensis subsp.
holarctica FSC022]
gi|164551591|gb|ABU60927.2| parB-like nuclease domain protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|282159197|gb|ADA78588.1| parB-like nuclease domain protein [Francisella tularensis subsp.
tularensis NE061598]
Length = 304
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + + I P+ + PR F + ++ L SIK +G+IQP+IV A
Sbjct: 34 QELNEQASKVGQLFELPLTIIKPDANQPRKTF--KNIDSLADSIKENGVIQPIIVTAKKA 91
Query: 87 G-LYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
++ IIAGERR+ A+K A L+ +P I + + + + + ++EN QR++++P EEA
Sbjct: 92 NGIHYIIAGERRYLASKQAGLTTIPCIVRQEESDANIVLLQLLENDQRENVSPFEEADAL 151
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
LI ++DI I+G+ S ++ L+I + +RE
Sbjct: 152 RDLIENKNVKKSDIAKILGRDNSWISMRLKIADANADIRE 191
>gi|291548820|emb|CBL25082.1| ParB-like partition proteins [Ruminococcus torques L2-14]
Length = 284
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 101/264 (38%), Gaps = 19/264 (7%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
++K+ E+ I I + ++P + + LE L +SIK +GI+ PL+VR I +
Sbjct: 3 KVKEKSNWKGETIVEIEIERLKAFRNHPFQVRDDDDLEKLKESIKMYGILTPLLVRPIKD 62
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G Y+II+G RR RAA + ++PV+I+ + + ++ + N+ R+ ++ E+A Y
Sbjct: 63 GTYEIISGHRRKRAAALLGYRKIPVLIQPMSYEDAVVKMVDTNLHREHISFSEKAFAYRM 122
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANI----LRILKLPSSVREMIRKEEISLGHARTLVST 202
G+ + I P V+ I + + L
Sbjct: 123 KNEALKQKVGRKKGQSGQQKKGKKTIEIIGEEFGDSPKQVQRYIAVTRLIPELLQKLDQE 182
Query: 203 SDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE---KRKKIFEGSREKEKYLTDLEKKISS 259
+ A I + + + ++I + S+ E +E +S
Sbjct: 183 EISFNPAVEISALTKEEQRELLEAMNYAQSTPSVSQAQRIKKLSKAGELTKKHMEDILSE 242
Query: 260 KVGLNISIKHRNNKGQFC-IKYET 282
KG+ +++
Sbjct: 243 I-----------KKGEVTRVEFNN 255
>gi|167768845|ref|ZP_02440898.1| hypothetical protein ANACOL_00162 [Anaerotruncus colihominis DSM
17241]
gi|167669017|gb|EDS13147.1| hypothetical protein ANACOL_00162 [Anaerotruncus colihominis DSM
17241]
Length = 523
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 87/227 (38%), Gaps = 19/227 (8%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
AL+ + + P+ I + + P+P NPR + L +L SIK++G
Sbjct: 60 EALLASLGDDD-------DDTPDGLVYIPVEDLYPHPDNPRK--DLGDLTELADSIKANG 110
Query: 75 IIQPLIVRAID----------NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
++Q L V Y ++ G RR A+K+A L E+P +I ++D +S ++
Sbjct: 111 VLQNLTVVPRAVTGEITGETWQKGYTVVIGHRRLAASKLAGLKELPCVITDMDLRSQVQT 170
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
++EN+QR DL E+A G++ ++ + + + ++
Sbjct: 171 MLMENIQRSDLTLYEQAQGFQMMLDLGDSVDEIARKSGFSQTTVRRRVKLLELDQKKFKK 230
Query: 185 MIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
+ + + + L + + R E +
Sbjct: 231 SVERGANLMDYMELDKIEDPKLKNEVLDAIGTNNFRQKLANAIETEK 277
>gi|161522622|ref|YP_001585551.1| parB-like partition protein [Burkholderia multivorans ATCC 17616]
gi|160346175|gb|ABX19259.1| parB-like partition protein [Burkholderia multivorans ATCC 17616]
Length = 559
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 101/194 (52%), Gaps = 5/194 (2%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
Q I + I NPR YF+ + ++ SI + G+ P+IVR +D+G +++IAG RR
Sbjct: 7 QQPTIKLGRIKLGR-NPRTYFDDAKMAEMKASISARGVDTPVIVRPVDDGYFELIAGGRR 65
Query: 98 FRAA--KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
++AA ++PV +++V ++ + EIA++EN+QR D++P +EA+ +L+ +
Sbjct: 66 YKAALETRGEDYDMPVNVKDVSDEEAEEIALIENIQRDDMSPGDEAVEAARLLGRCKGDR 125
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI--SLGHARTLVSTSDPLSLAQVIV 213
+ +G S + + L +L + V + I +S + + VI+
Sbjct: 126 EEAARRIGWSLPTLNSRLALLNCSNEVLAALNTRRILLGHAELLAALSKENQDRVLPVII 185
Query: 214 SKKMSVRDTEELVQ 227
+K SV + +LV+
Sbjct: 186 DEKKSVAEVRKLVE 199
>gi|118497041|ref|YP_898091.1| chromosome partition protein B [Francisella tularensis subsp.
novicida U112]
gi|254372401|ref|ZP_04987891.1| hypothetical protein FTCG_01625 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254373872|ref|ZP_04989354.1| hypothetical protein FTDG_00026 [Francisella novicida GA99-3548]
gi|118422947|gb|ABK89337.1| chromosome partition protein B [Francisella novicida U112]
gi|151570129|gb|EDN35783.1| hypothetical protein FTCG_01625 [Francisella novicida GA99-3549]
gi|151571592|gb|EDN37246.1| hypothetical protein FTDG_00026 [Francisella novicida GA99-3548]
Length = 304
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + + I P+ + PR F + ++ L SIK +G+IQP+IV A
Sbjct: 34 QELNEQASKVGQLFELPLTIIKPDANQPRKTF--KNIDSLADSIKENGVIQPIIVTAKKA 91
Query: 87 G-LYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
++ IIAGERR+ A+K A L+ +P I + + + + + ++EN QR++++P EEA
Sbjct: 92 DGIHYIIAGERRYLASKQAGLTTIPCIVRQEESDANIVLLQLLENDQRENVSPFEEADAL 151
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
LI ++DI I+G+ S ++ L+I +RE
Sbjct: 152 RDLIENKNVKKSDIAKILGRDNSWISMRLKIADADEDIRE 191
>gi|73539166|ref|YP_299533.1| ParB family protein [Ralstonia eutropha JMP134]
gi|72122503|gb|AAZ64689.1| ParB family protein [Ralstonia eutropha JMP134]
Length = 336
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 98/242 (40%), Gaps = 10/242 (4%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E + + +TE + + + NP N R ++ +++ SI +HG P
Sbjct: 49 PEPPTAFSAESAETENSRALVRIL-LTHLHDNPLNARRIYDPAVVQERAASIATHGQKTP 107
Query: 79 LIVRAIDNG--LYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
+ + Y +I G R RA A L + ++ + ++ + N QR D
Sbjct: 108 GLAAPDPSRPGHYILIDGHYRKRALASAGKLEMECFVENDLSDLDFYRLSFMLNEQRSDQ 167
Query: 136 NPLEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
+ L+ A+ + + L + DI + G S V L +L+LP SV ++R+ ++G
Sbjct: 168 SALDNAIAWRQLLDEGKVQKEEDICELTGISAGTVNKTLALLRLPESVLAVMRERPNAIG 227
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
++ L+L + + + ++ + + +E + K + + ++
Sbjct: 228 -----IAAGYELTLYFKLAGEDRTRELATRIMTDGLSSREVESIRKQAQEGKSRKVKEIS 282
Query: 255 KK 256
++
Sbjct: 283 RQ 284
>gi|118577421|ref|YP_899661.1| parB-like partition proteins [Pelobacter propionicus DSM 2379]
gi|118504926|gb|ABL01408.1| ParB family protein [Pelobacter propionicus DSM 2379]
Length = 564
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
+ T I + +IV +NPR +F +E+L S++ G+IQP+ + ++ G Y
Sbjct: 2 ESAVTKSHDLAHIPLGAIVTG-NNPRQFFCPTAMEELIASVRQKGVIQPICLNVLEGGKY 60
Query: 90 KIIAGERRFRAA--KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+IIAGERR+RAA + +P I+ +VD+ + +A++EN R++++P EEA+ ++
Sbjct: 61 QIIAGERRYRAALEVYGAEGTIPAIVTSVDSSEADSMALIENAIRENMSPTEEAVAAGKM 120
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+++ +++ + +G S + L +L L + + + I LGHA L +
Sbjct: 121 LAKNNNNRDETAAELGWHVSKLNRRLALLNLVAEAMTALNERRIMLGHAELLAAVPQDKQ 180
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ M + + IF+ +R
Sbjct: 181 TKALETITAMKMPVQQVKELLAKASTAFESAIFDTAR 217
>gi|254254837|ref|ZP_04948154.1| ParB-like partition protein [Burkholderia dolosa AUO158]
gi|124899482|gb|EAY71325.1| ParB-like partition protein [Burkholderia dolosa AUO158]
Length = 352
Score = 49.3 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 48/255 (18%), Positives = 97/255 (38%), Gaps = 6/255 (2%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L A I + + + + P + + SI +P NPR+++ + +L ++
Sbjct: 61 LDASI-DESPQYRAWRLENRYAPGQVIELPLKSIKHSPFNPRHFYLKSSIAELAVNLAKQ 119
Query: 74 GIIQPL--IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENV 130
G Q + I + G Y + G RR RA K A+ V I+ +V S ++ NV
Sbjct: 120 GQQQAIHVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPLGIQSYKLGYDLNV 179
Query: 131 QRKDLNPLEEALGYEQLISEY-GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
QR + A+ + + + + +Q ++ +G S VA L I KLP ++ + +
Sbjct: 180 QRDSQTVFDNAVVWRRFLDDKLFQSQKELSEHLGLDESTVAVALSIGKLPEAIMQEMVAR 239
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
G + + ++ ++L Q + K + + + K
Sbjct: 240 PDRFGSNMAYQVGRYHSARGTEATLRLINKIVADDLSTRQVSDIVKGRVAAQETP-KPAS 298
Query: 250 LTDLEKKISSKVGLN 264
+++ K
Sbjct: 299 RQRYAQRLEIKFDGK 313
>gi|206561873|ref|YP_002232636.1| putative partitioning protein ParB [Burkholderia cenocepacia J2315]
gi|198037913|emb|CAR53858.1| putative partitioning protein ParB [Burkholderia cenocepacia J2315]
Length = 353
Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 108/281 (38%), Gaps = 8/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ +Q + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESQQYRAWRLENRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP ++ + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELSEHLGLDESTVAVALSIGKLPEAIMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHNARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQETP-KPAGRQRYAQ 305
Query: 256 KISSKVGLNISIKHRN-NKGQFCIKYETN--EQLKIICSLL 293
++ K+G ++ + + ++ ++ I L
Sbjct: 306 RLEIKLGGKSVGDLKSYGEDRIELRLRGLPKDKRDAILEQL 346
>gi|167626623|ref|YP_001677123.1| chromosome partition protein B [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596624|gb|ABZ86622.1| chromosome partition protein B [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 304
Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 89/160 (55%), Gaps = 4/160 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR-AID 85
+ + ++ + P+ + PR F + ++ L +SI+ +G+IQP+IV D
Sbjct: 34 QELSDQASKVGQLFELPLNLVKPDVNQPRKTF--KNIDSLAESIRENGVIQPIIVTAKKD 91
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
+G++ IIAGERR+ A++ A L+ +P I + + + + + ++EN QR++++P EEA
Sbjct: 92 DGVHHIIAGERRYLASQKAGLTTIPCIVRQEESDANIILLQLLENDQRENVSPFEEADAL 151
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
LI ++DI ++G+ S ++ L+I ++RE
Sbjct: 152 RDLIENKNVKKSDIAKVLGRDNSWISMRLKIADAEDNIRE 191
>gi|241667180|ref|ZP_04754758.1| chromosome partition protein B [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254875732|ref|ZP_05248442.1| chromosome partition protein B [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841753|gb|EET20167.1| chromosome partition protein B [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 304
Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 89/160 (55%), Gaps = 4/160 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR-AID 85
+ + ++ + P+ + PR F + ++ L +SI+ +G+IQP+IV D
Sbjct: 34 QELSDQASKVGQLFELPLNLVKPDVNQPRKTF--KNIDSLAESIRENGVIQPIIVTAKKD 91
Query: 86 NGLYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
+G++ IIAGERR+ A++ A L+ +P I + + + + + ++EN QR++++P EEA
Sbjct: 92 DGVHHIIAGERRYLASQKAGLTTIPCIVRQEESDANIILLQLLENDQRENVSPFEEADAL 151
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
LI ++DI ++G+ S ++ L+I ++RE
Sbjct: 152 RDLIENKNVKKSDIAKVLGRDNSWISMRLKIADAEDNIRE 191
>gi|328676505|gb|AEB27375.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Francisella cf. novicida Fx1]
Length = 304
Score = 48.9 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + + I P+ + PR F + ++ L SIK +G+IQP+IV A
Sbjct: 34 QELNEQASKVGQLFELPLTIIKPDANQPRKTF--KNIDSLADSIKENGVIQPIIVTAKKA 91
Query: 87 G-LYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
++ IIAGERR+ A+K A L+ +P I + + + + + ++EN QR++++P EEA
Sbjct: 92 DGIHYIIAGERRYLASKQAGLTTIPCIVRQEESDANIVLLQLLENDQRENVSPFEEADAL 151
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
LI ++DI I+G+ S ++ L+I +RE
Sbjct: 152 RDLIENKNVKKSDIAKILGRDNSWISMRLKIADADEDIRE 191
>gi|325519132|gb|EGC98610.1| ParB family protein [Burkholderia sp. TJI49]
Length = 353
Score = 48.9 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 106/281 (37%), Gaps = 8/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESAQYRAWRLENRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP +V + + G
Sbjct: 187 VFDNAVVWRRFLDDQHFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q K + + + K +
Sbjct: 247 NMAYQVGRYHNARGTEATLRLINKIVSDDLSTRQVADIVKGRVAAQETP-KPASRQRYAQ 305
Query: 256 KISSKVGLNISIKHRN-NKGQFCIKYETN--EQLKIICSLL 293
++ K+G ++ + + ++ ++ I L
Sbjct: 306 RLEIKLGGKSVGDLKSYGEDRIELRLRGLPKDKRDAILEQL 346
>gi|312602813|ref|YP_004022658.1| chromosome partitioning protein parB [Burkholderia rhizoxinica HKI
454]
gi|312170127|emb|CBW77139.1| Chromosome partitioning protein parB [Burkholderia rhizoxinica HKI
454]
Length = 367
Score = 48.9 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 5/232 (2%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKII 92
P + + +I P+P NPR+++ + +L ++ G Q + V + +
Sbjct: 82 TPGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQAIHVIPDHQNPGTFFVS 141
Query: 93 AGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLNPLEEALGYEQL-ISE 150
G RR RA K A+ V I+ ++ S ++ NVQR + A+ + + +
Sbjct: 142 DGGRRVRALKEANKENVRAIVVDLPIGIESYKLGYDLNVQRDSQTVFDNAIVWRRFLDEQ 201
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQ 210
+ +Q ++ +G S VA L I KLP +V + + G +
Sbjct: 202 HFQSQRELAEHLGIDESTVAVALGIAKLPEAVMQEMVARPDRFGSNMAYQVARYHSAKGT 261
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVG 262
+ ++ ++L Q K + + + K +++ KVG
Sbjct: 262 DATLRLINKIVADDLSTRQVADIIKGRAVSSDA-SKPLRRQRYAQRLEIKVG 312
>gi|311697085|gb|ADP99957.1| ParB-like partition protein [marine bacterium HP15]
Length = 341
Score = 48.9 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 98/258 (37%), Gaps = 13/258 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY--- 57
MS ++ G GL IG+++ ++ PE T +++ I +P+ PR
Sbjct: 1 MSAQKEQKMEGLGLEG-IGDLSGLLNDPE-NTNGGGAGPLELALDLIDEDPNQPRTEDNP 58
Query: 58 -FESEGLEDLCQSIKSHGIIQPLIV--RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIR 114
F LE+L +I+ G+ P+ V + G + I G RRFR +++A +P I
Sbjct: 59 GFSKSSLEELAATIRHRGVKTPISVRENQDEPGRFIINHGARRFRGSRIAEKETIPAFI- 117
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
+ E V +++ E Y + DI + +GKS + V+ +
Sbjct: 118 ---DNDYNEADQVIENLQRNELTAREIADYIGRELAKDVKKGDIAAAIGKSAAFVSQHVT 174
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
+L LP + E ++ + + + +V+ ++ + +
Sbjct: 175 LLDLPEPIAEAFNTGRVNDVTVINELVKAYKKNPDEVVAWLADDEQEITRGSVKLLREY- 233
Query: 235 KRKKIFEGSREKEKYLTD 252
K E++ D
Sbjct: 234 LDDKRKHEDEERDPNTVD 251
>gi|205320758|gb|ACI02874.1| KorB [uncultured bacterium HHV216]
gi|205320813|gb|ACI02928.1| KorB [uncultured bacterium HH1107]
Length = 345
Score = 48.9 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/250 (16%), Positives = 88/250 (35%), Gaps = 17/250 (6%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+AL + I + I+ +P PR F + ++ + +SIK+
Sbjct: 4 LSAL------EGIDLGNPAPVADGTPKQIPLTDILEDPDQPRVEFPEDQMQKMVESIKAR 57
Query: 74 GIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+ P+ V+ + I G RRFRA+ MA +P + N + + E +
Sbjct: 58 GVKTPISVKPHPTEQGKWIINYGARRFRASVMAGKETIPAFVDNDHDDYDQVMENKERLN 117
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
+ + Q + G +N I + + ++ L ++ +P + +
Sbjct: 118 HSPIELAL----FIQKKIKQGEKKNVIAKKLNEDPVFISTHLALVDMPECLSKAYDAGFK 173
Query: 192 SLGHARTLVS-----TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
S L + + + + ++ + K+ K+ + E E
Sbjct: 174 SPKTLYDLRKLWESFPEEVNAWVDESLENGQDIIRSKVQALSKKLKEPKQAEATEADPES 233
Query: 247 EKYLTDLEKK 256
E + +++
Sbjct: 234 EPQAQESQEQ 243
>gi|221197611|ref|ZP_03570658.1| ParB family protein [Burkholderia multivorans CGD2M]
gi|221204284|ref|ZP_03577302.1| ParB family protein [Burkholderia multivorans CGD2]
gi|221176450|gb|EEE08879.1| ParB family protein [Burkholderia multivorans CGD2]
gi|221184165|gb|EEE16565.1| ParB family protein [Burkholderia multivorans CGD2M]
Length = 353
Score = 48.9 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 46/249 (18%), Positives = 98/249 (39%), Gaps = 5/249 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESPQYRAWRLENRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGTYFVSDGGRRVRALKEANKDSVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + +++ +Q ++ +G S VA L I KLP +V + + G
Sbjct: 187 VFDNAVVWRRFLDNKHFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHAARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQDAP-KPASRQRYAQ 305
Query: 256 KISSKVGLN 264
++ K+G
Sbjct: 306 RLEIKLGGK 314
>gi|163747300|ref|ZP_02154654.1| putative plasmid stabilisation protein [Oceanibulbus indolifex
HEL-45]
gi|161379410|gb|EDQ03825.1| putative plasmid stabilisation protein [Oceanibulbus indolifex
HEL-45]
Length = 665
Score = 48.9 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 71/195 (36%), Gaps = 5/195 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE-DLCQSIKSHGIIQ 77
++ ++ I + + P+P N R S + ++ SI+ GI Q
Sbjct: 10 PTTSKKTEAVGSAAPDGGADIRMIPLDKLEPSPLNVRKVAASASDDAEILASIRETGIKQ 69
Query: 78 PLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
L+V A+ + + AG RR + A+ + + V+++ + + ++
Sbjct: 70 NLVVHALSETRFAVDAGGRRLKALKQLAEDGVIPADHPVPCLVEDERNAILTSATENLQR 129
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
+ + G ++++I G S V L++ ++ + E R +++L
Sbjct: 130 AAMHPADQFEAFDKMIGEGRSEDEIALKFGVSVDLVRRRLKLARVAPEIIEQFRAGDLTL 189
Query: 194 GHARTLVSTSDPLSL 208
T D
Sbjct: 190 ECVMAFTLTDDHDRQ 204
>gi|83956193|ref|ZP_00964646.1| hypothetical protein NAS141_04753 [Sulfitobacter sp. NAS-14.1]
gi|83839579|gb|EAP78759.1| hypothetical protein NAS141_04753 [Sulfitobacter sp. NAS-14.1]
Length = 723
Score = 48.9 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 71/195 (36%), Gaps = 5/195 (2%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE-DLCQSIKSHGIIQ 77
++ ++ I + + P+P N R S + ++ SI+ GI Q
Sbjct: 10 PTTSKKTEAVGSAAPDGGADIRMIPLDKLEPSPLNVRKVAASASDDAEILASIRETGIKQ 69
Query: 78 PLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
L+V A+ + + AG RR + A+ + + V+++ + + ++
Sbjct: 70 NLVVHALSETRFAVDAGGRRLKALKQLAEDGVIPADHPVPCLVEDERNAILTSATENLQR 129
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
+ + G ++++I G S V L++ ++ + E R +++L
Sbjct: 130 AAMHPADQFEAFDKMIGEGRSEDEIALKFGVSVDLVRRRLKLARVAPEIIEQFRAGDLTL 189
Query: 194 GHARTLVSTSDPLSL 208
T D
Sbjct: 190 ECVMAFTLTDDHDRQ 204
>gi|291556987|emb|CBL34104.1| ParB-like partition proteins [Eubacterium siraeum V10Sc8a]
Length = 308
Score = 48.9 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE 61
SN +K +L GL+ + + +S I + I +P + +++
Sbjct: 6 SNIKAKGKLN-GLS-------------FYSSVSDNDSVHEIPLDLIDSFEGHPFSVVDND 51
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSS 121
+ L +S+K +GI+ P IVR +G Y++I+G RR RA ++A L + ++ + ++ +
Sbjct: 52 DMIQLTESVKHNGIMNPAIVREKGSGRYELISGHRRKRACELAGLETLKAYVKQLTDEEA 111
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLI 148
I + N+QR+ + P E A Y+
Sbjct: 112 TIIMVDSNLQREKILPSERAFAYKMKY 138
>gi|221210515|ref|ZP_03583495.1| ParB family protein [Burkholderia multivorans CGD1]
gi|221169471|gb|EEE01938.1| ParB family protein [Burkholderia multivorans CGD1]
Length = 353
Score = 48.9 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 46/249 (18%), Positives = 97/249 (38%), Gaps = 5/249 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESPQYRAWRLENRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP +V + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHAARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQDAP-KPASRQRYAQ 305
Query: 256 KISSKVGLN 264
++ K+G
Sbjct: 306 RLEIKLGGK 314
>gi|161519710|ref|YP_001583137.1| parB-like partition protein [Burkholderia multivorans ATCC 17616]
gi|189354107|ref|YP_001949734.1| ParB family partition protein [Burkholderia multivorans ATCC 17616]
gi|160343760|gb|ABX16845.1| parB-like partition protein [Burkholderia multivorans ATCC 17616]
gi|189338129|dbj|BAG47198.1| ParB family partition protein [Burkholderia multivorans ATCC 17616]
Length = 353
Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 46/249 (18%), Positives = 97/249 (38%), Gaps = 5/249 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESPQYRAWRLENRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP +V + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHAARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQDAP-KPASRQRYAQ 305
Query: 256 KISSKVGLN 264
++ K+G
Sbjct: 306 RLEIKLGGK 314
>gi|332283475|ref|YP_004415386.1| chromosome partitioning protein [Pusillimonas sp. T7-7]
gi|330427428|gb|AEC18762.1| chromosome partitioning protein [Pusillimonas sp. T7-7]
Length = 308
Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 53/298 (17%), Positives = 99/298 (33%), Gaps = 19/298 (6%)
Query: 13 GLA-ALIGEVNQSIDSPEKKTETIPESQDCISIHSIV-----PNPHNPRNYFESEGLEDL 66
GL A +G++ +D+P + P + I + +NP F + +L
Sbjct: 13 GLDLAGLGDLASMLDTPVSQ----PGRPQMFDLDKIREDRNVRSENNP--GFGKVPMAEL 66
Query: 67 CQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVII---RNVDNKSS 121
+K GI PL +R Y I G RR+R+AK A +VP I N ++
Sbjct: 67 TADVKQRGIKSPLSLRPDPERPGYYIINYGHRRYRSAKAAGAKQVPGFIDTDFNSFDQVK 126
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSS 181
+ + R+ + + L +E + + V + + + + + +
Sbjct: 127 ENLKHEKLTARELADFIGGKLAEGMSQAEIAEGLSKSKAFVSQHVALLNLPEPLAEAFGA 186
Query: 182 VREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFE 241
+ L A +LA+ S E + K+K
Sbjct: 187 GQIADVTVANELARAHRENPELVEQTLARSSESLAAKPVTREVAKALRKPAKKKAPAPAI 246
Query: 242 GSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC--IKYETNEQLKIICSLLGEND 297
+ + LE +S + +SI+ Q I + L + LG +
Sbjct: 247 APSSHQPEIIRLENALSELLTTPVSIRSARGDDQVQLCIDARGWDHLNELLVRLGLGE 304
>gi|84686709|ref|ZP_01014601.1| hypothetical protein 1099457000242_RB2654_00705 [Maritimibacter
alkaliphilus HTCC2654]
gi|84665383|gb|EAQ11861.1| hypothetical protein RB2654_00705 [Rhodobacterales bacterium
HTCC2654]
Length = 723
Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 16/214 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ ++ + + ++ T I + + P+P N R S
Sbjct: 1 MAKTSTRPK---------PATVKKTEAAASATADGATDIRLIPLDQLEPSPLNVRKVAPS 51
Query: 61 EGLE-DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLS-----EVPVIIR 114
+E +L SI+ GI Q L+V A+ + + AG RR +A K + + PV
Sbjct: 52 ASVEAELLASIRETGIKQNLVVHALSETRFAVDAGGRRLKALKQLADDGVIPVDHPVPCL 111
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
D ++++ + EN+QR ++P ++ +E +I+E G S V L+
Sbjct: 112 VEDERNAILTSTTENLQRAAMHPADQFEAFEAMIAEGRSEDEIALK-FGVSVDLVRRRLK 170
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
+ ++ + E R +++L T D
Sbjct: 171 LARVAPEIIEQFRAGDLTLECVMAFTLTDDHDRQ 204
>gi|118602053|ref|YP_908753.1| transcriptional regulator [Photobacterium damselae subsp.
piscicida]
gi|118614793|ref|YP_908576.1| transcriptional regulator [Photobacterium damselae subsp.
piscicida]
gi|134044603|ref|YP_001101721.1| hypothetical protein YR71pYR1_0027 [Yersinia ruckeri]
gi|134044948|ref|YP_001102095.1| hypothetical protein YpIP275_pIP1202_0026 [Yersinia pestis biovar
Orientalis str. IP275]
gi|134047121|ref|YP_001101905.1| hypothetical protein SNSL254_pSN254_0026 [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|165938045|ref|ZP_02226605.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|237640214|ref|YP_002891069.1| hypothetical protein peH4H_0026 [Escherichia coli]
gi|237809934|ref|YP_002894373.1| hypothetical protein pAR060302_0027 [Escherichia coli]
gi|237810123|ref|YP_002894562.1| hypothetical protein pAM04528_0026 [Salmonella enterica]
gi|300925736|ref|ZP_07141594.1| hypothetical protein HMPREF9548_03790 [Escherichia coli MS 182-1]
gi|118596884|dbj|BAF38188.1| Predicted transcriptional regulators [Photobacterium damselae
subsp. piscicida]
gi|118597062|dbj|BAF38365.1| predicted transcriptional regulators [Photobacterium damselae
subsp. piscicida]
gi|133904966|gb|ABO40983.1| hypothetical protein YR71pYR1_0027 [Yersinia ruckeri]
gi|133905040|gb|ABO41055.1| hypothetical protein SNSL254_pSN254_0026 [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|133905482|gb|ABO42244.1| hypothetical protein YpIP275_pIP1202_0026 [Yersinia pestis biovar
Orientalis str. IP275]
gi|165914068|gb|EDR32685.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|229561433|gb|ACQ77636.1| conserved hypothetical protein [Escherichia coli]
gi|229561607|gb|ACQ77809.1| conserved hypothetical protein [Salmonella enterica]
gi|229561789|gb|ACQ77990.1| conserved hypothetical protein [Escherichia coli]
gi|300418158|gb|EFK01469.1| hypothetical protein HMPREF9548_03790 [Escherichia coli MS 182-1]
gi|324007574|gb|EGB76793.1| hypothetical protein HMPREF9532_02711 [Escherichia coli MS 57-2]
gi|327536463|gb|AEA95296.1| hypothetical protein pSD853_174_30 [Salmonella enterica subsp.
enterica serovar Dublin]
gi|332144530|dbj|BAK19750.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 182
Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVG--L 263
A + + +L+ + + +++ + LE +S G +
Sbjct: 85 HVRAVAKLPFSKREKLLRDLLHTRTPVHKFEAIAKGKEVDRDADIKRLETLMSDATGRPI 144
Query: 264 NISIKHRNNKGQFCIKYETNEQLKIICSLLG 294
+ G+ + + T + L +C LG
Sbjct: 145 KVRYNPAKRSGELTLGFFTLDDLDDVCKALG 175
>gi|170700814|ref|ZP_02891804.1| parB-like partition protein [Burkholderia ambifaria IOP40-10]
gi|170134262|gb|EDT02600.1| parB-like partition protein [Burkholderia ambifaria IOP40-10]
Length = 339
Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 86/216 (39%), Gaps = 30/216 (13%)
Query: 1 MSNNYSK-----------RRLGRGLA----AL---IGEVNQSIDSPEKKTETIP------ 36
M+ SK L RGLA AL + E + + +
Sbjct: 1 MAKETSKDKKPTGNLHLAAGLLRGLAQENAALETRLPEPPPASNPAAEAATPAATPADAH 60
Query: 37 --ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK--II 92
+ +++ +PNP NPR ++ L +L ++K G I+P+ V + K +I
Sbjct: 61 DLGAPQRVAVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGKLVVI 120
Query: 93 AGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
G+RR R + + + + IA N + ++A+ +++L+ E
Sbjct: 121 DGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRLLDEK 180
Query: 152 GYTQNDI-GSIVGKSRSHVANILRILKLPSSVREMI 186
+ + +GK ++ ++ L + LP+++ E +
Sbjct: 181 VFPDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 216
>gi|170736912|ref|YP_001778172.1| parB-like partition protein [Burkholderia cenocepacia MC0-3]
gi|169819100|gb|ACA93682.1| parB-like partition protein [Burkholderia cenocepacia MC0-3]
Length = 353
Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 107/281 (38%), Gaps = 8/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESPQYRAWRLENRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP ++ + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELSEHLGLDESTVAVALSIGKLPEAIMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHNARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQETP-KAAGRQRYAQ 305
Query: 256 KISSKVGLNISIKHRN-NKGQFCIKYETN--EQLKIICSLL 293
++ K+G ++ + + ++ ++ I L
Sbjct: 306 RLEIKLGGKSVGDLKSYGEDRIELRLRGLPKDKRDAILEQL 346
>gi|254249540|ref|ZP_04942860.1| hypothetical protein BCPG_04404 [Burkholderia cenocepacia PC184]
gi|124876041|gb|EAY66031.1| hypothetical protein BCPG_04404 [Burkholderia cenocepacia PC184]
Length = 353
Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 107/281 (38%), Gaps = 8/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESPQYRAWRLENRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP ++ + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELSEHLGLDESTVAVALSIGKLPEAIMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHNARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQETP-KAAGRQRYAQ 305
Query: 256 KISSKVGLNISIKHRN-NKGQFCIKYETN--EQLKIICSLL 293
++ K+G ++ + + ++ ++ I L
Sbjct: 306 RLEIKLGGKSVGDLKSYGEDRIELRLRGLPKDKRDAILEQL 346
>gi|171319315|ref|ZP_02908427.1| parB-like partition protein [Burkholderia ambifaria MEX-5]
gi|171095460|gb|EDT40428.1| parB-like partition protein [Burkholderia ambifaria MEX-5]
Length = 343
Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 86/220 (39%), Gaps = 34/220 (15%)
Query: 1 MSNNYSK-----------RRLGRGLA----AL---IGEVNQSIDSPEKKTETIP------ 36
M+ SK L RGLA AL + E + + +
Sbjct: 1 MAKETSKDKKPTGNLHLAAGLLRGLAQENAALETRLPEPTPASNPAVEAAIPAAPTAATS 60
Query: 37 ------ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ +++ +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 ADAHDLGAPQKVAVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGK 120
Query: 91 --IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+I G+RR R + + + + IA N + ++A+ +++L
Sbjct: 121 LVVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRL 180
Query: 148 ISEYGYTQNDI-GSIVGKSRSHVANILRILKLPSSVREMI 186
+ E + + +GK ++ ++ L + LP+++ E +
Sbjct: 181 LDEKVFPDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 220
>gi|291037267|ref|ZP_06568231.1| plasmid partitioning protein [Gluconacetobacter xylinus NBRC 3288]
Length = 641
Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 2/154 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYF-ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+ +++ NP NPR L ++K+ GII P +VR +G I+AG R
Sbjct: 2 ELREVDPKTLLDNPENPRKSAPNEAEERQLALNVKAVGIIHPPLVRETPDG-LMIVAGHR 60
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RAA A L + V + D + A EN+ R+ + +E+ +L E +
Sbjct: 61 RRRAAVKAGLKTIQVTVAGDDAELDRMRAASENMIRQPMTQVEQWRVVARLREEKKWNDT 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
I + + + I R+ + + I +
Sbjct: 121 AICKALMLTPVQLKQIGRLSAILPEILAWIEAGK 154
>gi|282900068|ref|ZP_06308026.1| ParB-like protein nuclease family protein [Cylindrospermopsis
raciborskii CS-505]
gi|281195056|gb|EFA69995.1| ParB-like protein nuclease family protein [Cylindrospermopsis
raciborskii CS-505]
Length = 306
Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID--NGLYKII 92
+ ISI I R YF+ E L L QSI+ HGI+QPL+VR +G Y+++
Sbjct: 24 VESPTTTISIDKIRLPAKQARRYFDVEKLNHLAQSIQEHGILQPLLVRPFSGVSGEYELV 83
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
AGERR RAA++ L EVP+I +++ + +I ++EN+QR+DL+PLEE G
Sbjct: 84 AGERRLRAAQIIGLKEVPIISKDLSDLQRSQITLLENLQREDLSPLEETEGI 135
>gi|91791145|ref|YP_552095.1| ParB family protein [Polaromonas sp. JS666]
gi|91701026|gb|ABE47197.1| ParB family protein [Polaromonas sp. JS666]
Length = 569
Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 98/185 (52%), Gaps = 6/185 (3%)
Query: 25 IDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI 84
+++ +K ++ + + IV NPR +F+ + +L ++K+ G++ +I+R +
Sbjct: 2 VETIDKPSDVKKGRLAHVPLTCIVMGS-NPRTHFDDQEQFELNATVKALGVMTAVILRDL 60
Query: 85 DNGLYKIIAGERRFRAA-----KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+GLY+++AGERR+ AA + + + ++D ++L A+VEN+ R ++ E
Sbjct: 61 GDGLYQLVAGERRYHAAKLAFGEDYEIPANIFDMDDMDEAAALVAALVENIARAGMSAAE 120
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
EA G +L++E+ +N++ +G VA L ++ +V + + K I LGHA L
Sbjct: 121 EARGCAKLLAEFAGDRNEVARHMGLKPEVVARRLALMNASDNVLDALTKRVIKLGHAELL 180
Query: 200 VSTSD 204
+
Sbjct: 181 AAAPK 185
>gi|309796442|ref|ZP_07690850.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|308119947|gb|EFO57209.1| conserved hypothetical protein [Escherichia coli MS 145-7]
Length = 182
Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR--NNK 273
+ +L+ + +++ + LE +S G I I++
Sbjct: 95 SKREKLLRDLLHTRTPVHTYEAIAKGKEVDRDADIKRLETLMSDATGRPIKIRYNPAKRS 154
Query: 274 GQFCIKYETNEQLKIICSLLG 294
G+ + + T + L +C LG
Sbjct: 155 GELTLGFFTLDDLDDVCKALG 175
>gi|167589476|ref|ZP_02381864.1| parB-like partition protein [Burkholderia ubonensis Bu]
Length = 341
Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 86/219 (39%), Gaps = 33/219 (15%)
Query: 1 MSNNYSKR-----------RLGRGLA----AL---IGEVNQSIDSPEKKTETIP------ 36
M+ + SK L RGLA AL + E + + +
Sbjct: 1 MAKDTSKEKKATGNLHLAAGLLRGLAQENAALETRLPEPSVAPLTAVAAPAVKAAMTLPA 60
Query: 37 -----ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK- 90
+ +++ +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 DAEDLGAPQKVAVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGKL 120
Query: 91 -IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
+I G+RR R + + + + IA N + ++A+ +++L+
Sbjct: 121 VVIDGQRRLRATSINGDETINATFRSDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRLL 180
Query: 149 SEYGYTQNDI-GSIVGKSRSHVANILRILKLPSSVREMI 186
E + + +GK ++ ++ L + L +++ E +
Sbjct: 181 DEKVFPDQNTLAEKIGKDKATISKTLSLNALSTTLLERM 219
>gi|330814455|ref|YP_004362630.1| parB-like partition protein [Burkholderia gladioli BSR3]
gi|327374447|gb|AEA65798.1| parB-like partition protein [Burkholderia gladioli BSR3]
Length = 353
Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 6/220 (2%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCI---SIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L + D I SI +PNP+NPR+++ + ++ L +++
Sbjct: 43 LDPDARPMTDGTPDDLPADHAEDQRIHVLSIDDCIPNPYNPRSFYSPQSIDTLAATLQQE 102
Query: 74 GIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSE-VPVIIRNVDNKSSLEIAIVENV 130
+QP+I + I+ GERR RA K + + + ++ NK +A N
Sbjct: 103 QQLQPVIFTRLPEFPGKNIIVDGERRKRALKSLGRTTVMAIYRPDLSNKELFTLAYKANK 162
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
+R D + A+ +++L++E Y + V N + +L +
Sbjct: 163 ERDDQTVFDNAVSWQRLLNEKVYRDQLELAAAIGEDKGVVNKVLLLNTLPMPLLQRMVDN 222
Query: 191 ISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQD 230
+ A V++ + V +
Sbjct: 223 ADKVKLSHAYNIKLICDKAGDAVAEHWLEQVIAGRVSVRK 262
>gi|224282997|ref|ZP_03646319.1| parB-like partition protein [Bifidobacterium bifidum NCIMB 41171]
gi|313140152|ref|ZP_07802345.1| predicted protein [Bifidobacterium bifidum NCIMB 41171]
gi|313132662|gb|EFR50279.1| predicted protein [Bifidobacterium bifidum NCIMB 41171]
Length = 465
Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 24/235 (10%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI------DNGLYKI 91
+ + + + + NP+NPR +++L SI+S GI QPL+V + Y++
Sbjct: 4 TIENLQVDDLHANPNNPRKQV--GDVDELASSIRSQGIKQPLLVTPNGETDIDGHKQYRV 61
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
+ G RR AAK + LS VP I+ +D + EI +VEN QR DL P+EEA GY+ L+
Sbjct: 62 VIGHRRLAAAKQSGLSTVPAIVEEMDARREREIMLVENTQRSDLTPIEEADGYQGLLDL- 120
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
G ++ G+S V L+I ++P R+M ++ +
Sbjct: 121 GVGVKEMAEKTGRSDRFVRRRLKIARIPQETRDMSADFSQMSLDQLDRLAEFESDP---- 176
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS 266
++ + D ++ + + +K L L K G+ +
Sbjct: 177 ------DMQQELARADDFDWTYQRLSQERRKTIWHDKALKALAKA-----GIKVE 220
>gi|171057472|ref|YP_001789821.1| parB-like partition protein [Leptothrix cholodnii SP-6]
gi|170774917|gb|ACB33056.1| parB-like partition protein [Leptothrix cholodnii SP-6]
Length = 320
Score = 48.1 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
+ + + + T + +++ +I +P PR F+ L+ L +I+ G+ QP+ VR
Sbjct: 6 EDLVALDAPTADASGTPLMLALDAIDEDPEQPRREFDESSLQALADTIRERGVRQPISVR 65
Query: 83 AIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENV 130
+ + G RR RAA+MA +++PV + ++ I +
Sbjct: 66 PHPAQPGRWLLNFGARRLRAARMAGHAQIPVFVDTTADRYDQVIENEQRE 115
>gi|148556574|ref|YP_001264156.1| nuclease [Sphingomonas wittichii RW1]
gi|148501764|gb|ABQ70018.1| ParB domain protein nuclease [Sphingomonas wittichii RW1]
Length = 715
Score = 48.1 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 85/209 (40%), Gaps = 11/209 (5%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKSHGIIQPL 79
+ +++ E + + + ++ + +P N R +E L SI+ G+IQ L
Sbjct: 1 MTKTVQIETTAAEPVSGIEIFVPLNKLKKSPKNARKVPHGEAAIEALAASIEHKGLIQNL 60
Query: 80 IVRA-----IDNGLYKIIAGERRF-----RAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
++ G Y + AGE R RA + PV R EI++ EN
Sbjct: 61 VIEPEMKDEKPTGAYFVTAGEGRRLAYLLRAKRRQIRKNHPVRCRLDTENDPSEISLDEN 120
Query: 130 VQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
V R ++P ++ + +L G+ +IG+ G S V LR+ + + ++ R++
Sbjct: 121 VTRTPMHPADQFERFRELADGNGWGAEEIGARFGVSGGVVKQRLRLGAVSPKLLQVYRED 180
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMS 218
++L T D QV + +
Sbjct: 181 GLTLDQLMAFAITEDHARQEQVFENLHHN 209
>gi|134292506|ref|YP_001116242.1| ParB family protein [Burkholderia vietnamiensis G4]
gi|134135663|gb|ABO56777.1| ParB family protein [Burkholderia vietnamiensis G4]
Length = 353
Score = 48.1 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 46/249 (18%), Positives = 96/249 (38%), Gaps = 5/249 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESPQYRAWRLEHRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 IVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
V + Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGSYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP SV + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELSEHLGLDESTVAVALSIGKLPESVMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHNARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQETP-KPAGRQRYAQ 305
Query: 256 KISSKVGLN 264
++ K+G
Sbjct: 306 RLEIKLGGK 314
>gi|295084518|emb|CBK66041.1| ParB-like partition proteins [Bacteroides xylanisolvens XB1A]
Length = 328
Score = 48.1 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
I I I P+P NPR F+ LE+L +I+ G++QP+ VR +
Sbjct: 2 EVQNIRIDLISPSPLNPRKTFDEAALEELASNIEKQGLLQPITVRVAKSEEMTN 55
>gi|121583045|ref|YP_973486.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
gi|120596307|gb|ABM39744.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
Length = 363
Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
P + + I +PH PR F++ L+ + SI++HG++QP++VR G Y
Sbjct: 39 AVSAQPGEALRLPLADIDEDPHQPRTVFDTAELQSMADSIRAHGVVQPIVVRPPVKGRYL 98
Query: 91 IIAGERRFRAAK 102
+ G RR RA++
Sbjct: 99 LAFGARRLRASR 110
>gi|307947397|ref|ZP_07662731.1| nuclease [Roseibium sp. TrichSKD4]
gi|307769539|gb|EFO28766.1| nuclease [Roseibium sp. TrichSKD4]
Length = 645
Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 26 DSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA-I 84
T +++ + +P N R + +E+L +SI + GI Q L+VR
Sbjct: 2 TKTNANANTTSSDIILVALDKLDIDPLNVRKTYSQTSIEELAESIAAQGIFQNLLVRKAK 61
Query: 85 DNGLYKIIAGERRFRAAKMASLS-----EVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
Y + AG RR+RAA + PV ++ +D +LE+++ ENV R+ +NP +
Sbjct: 62 GKDRYHVSAGGRRYRAALHLVKEGRLAADHPVPVKVIDKAEALELSLAENVMREAMNPAD 121
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
+ + ++E G DI + G + + V L + K+ ++ E+ R+E ++L
Sbjct: 122 QYEAF-TALAEAGQAIADIAARFGTTEAIVKKRLALGKVAPALMELYRREGMTLEQLAAF 180
Query: 200 VSTSDP 205
T D
Sbjct: 181 TITDDH 186
>gi|323529068|ref|YP_004231220.1| parB-like partition protein [Burkholderia sp. CCGE1001]
gi|323386070|gb|ADX58160.1| parB-like partition protein [Burkholderia sp. CCGE1001]
Length = 352
Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 108/267 (40%), Gaps = 17/267 (6%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETI------------PESQDCISIHSIVPNPHNPRNYFE 59
R L++++ ++ +DS + + E+ P +++ +I P+P NPR+++
Sbjct: 48 RTLSSVVSPMSADLDSVDTENESAAYRSWRMQHGYRPGQVIELALKTIKPSPFNPRHFYL 107
Query: 60 SEGLEDLCQSIKSHGIIQPL--IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
+ +L ++ G Q + I + G Y + G RR RA K A+ V I+ ++
Sbjct: 108 KSSIAELAVNLAKQGQQQAIHVIPDYDNPGTYFVSDGGRRVRALKEANKETVKAIVIDLP 167
Query: 118 -NKSSLEIAIVENVQRKDLNPLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRI 175
S ++ NVQR + A+ +++ + +Q ++ +G S VA L I
Sbjct: 168 IGLESYKLGYDLNVQRDSQTVFDNAVVWKRFLDDRHFQSQKELAEHLGLDESTVAVALSI 227
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
KLP +V + + G + + ++ +++L Q K
Sbjct: 228 AKLPETVMQEMVARPDRFGSNMAYQVGRYHAARGADATLRLINKILSDDLSTRQVADIVK 287
Query: 236 RKKIFEGSREKEKYLTDLEKKISSKVG 262
+ + S K +++ K+
Sbjct: 288 GRATTQES-AKPAGRQRYAQRLEIKLD 313
>gi|258624176|ref|ZP_05719126.1| transcriptional regulator [Vibrio mimicus VM603]
gi|258583607|gb|EEW08406.1| transcriptional regulator [Vibrio mimicus VM603]
Length = 182
Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
A + + +L+ + + +++ + LE +S G I
Sbjct: 85 HVRAVAKLPFSKREKLLRDLLHTRTPVHKFEAIAKGKELDRDADIKRLETLMSDATGRPI 144
Query: 266 SIKHR--NNKGQFCIKYETNEQLKIICSLLG 294
I++ G+ + + T + L +C LG
Sbjct: 145 KIRYNPAKRSGELTLGFFTLDDLDDVCKALG 175
>gi|253567948|ref|ZP_04845359.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251842021|gb|EES70101.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 489
Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
I I I P+P NPR F+ LE+L +I+ G++QP+ VR +
Sbjct: 2 EVQNIRIDLISPSPLNPRKTFDEAALEELASNIEKQGLLQPITVRVAKSEEMTN 55
>gi|295700664|ref|YP_003608557.1| parB-like partition protein [Burkholderia sp. CCGE1002]
gi|295439877|gb|ADG19046.1| parB-like partition protein [Burkholderia sp. CCGE1002]
Length = 351
Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 53/292 (18%), Positives = 112/292 (38%), Gaps = 13/292 (4%)
Query: 15 AALIGEVNQSIDSPEK---KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
A I + + + + P +++ +I P+P NPR ++ + +L ++
Sbjct: 59 DAEIPDPDNESAAYRAWRLEHGYRPGQVIELALKTIKPSPFNPRYFYVKSSIAELAVNLA 118
Query: 72 SHGIIQPL--IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVE 128
G Q + I + G Y + G RR RA K A+ V I+ ++ S ++
Sbjct: 119 KQGQQQAIHVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDLPIGIQSYKLGYDL 178
Query: 129 NVQRKDLNPLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
NVQR + A+ + + + +Q ++ +G S VA L I KLP +V + +
Sbjct: 179 NVQRDSQTVFDNAVVWRRFLDERHFQSQKELAEHLGLDESTVAVALSIAKLPETVMQEMV 238
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
G + + ++ +++L Q K + + S K
Sbjct: 239 ARPDRFGSNMAYQVGRYHTARGADATLRLINRILSDDLSTRQVADIVKGRATAQES-AKP 297
Query: 248 KYLTDLEKKISSKVGLNISIKHRNNKG--QFCIKYETN--EQLKIICSLLGE 295
+++ K+G +S+ + G + ++ + E+ I + +
Sbjct: 298 AGRQRYAQRLEIKLG-GVSVGDLKSYGDDRLELRLKGLTREKRDDILRQIEK 348
>gi|238023396|ref|YP_002907629.1| ParB-like partition protein [Burkholderia glumae BGR1]
gi|237880449|gb|ACR32778.1| ParB-like partition protein [Burkholderia glumae BGR1]
Length = 346
Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 50/252 (19%), Positives = 100/252 (39%), Gaps = 12/252 (4%)
Query: 16 ALIGEVNQSIDS--PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
AL +V I + I + +PNP+NPR +++ +++L S +S
Sbjct: 41 ALPSDVADRIPGTVSREGILASERRPVKIRVAETIPNPYNPRVFYDEATIDELVNSFESQ 100
Query: 74 GIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNV--DNKSSLEIAIVEN 129
G ++ + V ++ + II G RR RAAK + + I + K+ A N
Sbjct: 101 GQLEAIKVTRLNEYPGKWVIIDGGRRTRAAKRRNDEFIDAEIIEEALEAKTLYLRAYHAN 160
Query: 130 VQRKDLNPLEEALGYEQ-LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
R++ ++A +++ L QN++ VG+ HV+ +L++ LP ++ E + K
Sbjct: 161 KDREEQTDFDDAYAWKKLLDDGIYRDQNELAQAVGRDPKHVSKVLQLTTLPETLLESMAK 220
Query: 189 EEI-----SLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ + + ++ + +L Q + E ++
Sbjct: 221 RADVVKLSHAYNLKLIFDRGGETLASRWLNEVIAGTTSVRKLEQIAADAAEPKQAKRNKV 280
Query: 244 REKEKYLTDLEK 255
+ KY LE
Sbjct: 281 HYQSKYPFQLED 292
>gi|107027501|ref|YP_625012.1| parB-like partition proteins [Burkholderia cenocepacia AU 1054]
gi|116693787|ref|YP_839320.1| parB-like partition proteins [Burkholderia cenocepacia HI2424]
gi|105896875|gb|ABF80039.1| ParB family protein [Burkholderia cenocepacia AU 1054]
gi|116651787|gb|ABK12427.1| ParB family protein [Burkholderia cenocepacia HI2424]
Length = 353
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 107/281 (38%), Gaps = 8/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESPQYRAWRLENRYAPGQVIELPLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYDNPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP ++ + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELSEHLGLDESTVAVALSIGKLPEAIMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHNARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQETP-KAAGRQRYAQ 305
Query: 256 KISSKVGLNISIKHRN-NKGQFCIKYETN--EQLKIICSLL 293
++ K+G ++ + + ++ ++ I L
Sbjct: 306 RLEIKLGGKSVGDLKSYGEDRIELRLRGLPKDKRDAILEQL 346
>gi|158339898|ref|YP_001521068.1| ParB family chromosome partitioning protein [Acaryochloris marina
MBIC11017]
gi|158310139|gb|ABW31754.1| chromosome partitioning protein, ParB family, putative
[Acaryochloris marina MBIC11017]
Length = 316
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++R L + + A NQ D E I ++SI R YF+ + +E
Sbjct: 1 MTRRTLKKAIQA----DNQLSDFVFGNVEVADGDLKYIPLNSIKRTTLQQRRYFDQKQIE 56
Query: 65 DLCQSI-----KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ + + + ++ Y+++AGERR+RAA+ +L EVPV I +D++
Sbjct: 57 EWAKHEIKINGIRSPLWVRKLPKSNRKQEYELVAGERRYRAAEFLNLLEVPVRIFILDDR 116
Query: 120 SSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
+L ++VEN+QR+DL+PLEE G + +S + + ++ +
Sbjct: 117 QALMASLVENMQRQDLSPLEETEGTLEFLSMELDLPIEKVTKFLYQMNNASK 168
>gi|198283528|ref|YP_002219849.1| parB-like partition protein [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198248049|gb|ACH83642.1| parB-like partition protein [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 412
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 10/229 (4%)
Query: 42 ISIHSIVPNPHNPRNYF--------ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+++ I P+P PR F LE L +SI HG++QP+ V + +G Y+IIA
Sbjct: 69 LALSEIEPDPEQPRKTFVASGAQDAIDNDLELLKESILQHGVLQPIAVHPVASGRYRIIA 128
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEI--AIVENVQRKDLNPLEEALGYEQLISEY 151
GERR+RA+ A S P + D + + R ++ +E + +
Sbjct: 129 GERRWRASMAARDSGQPCRRKGYDLSRIPAVILEPNTDADRLEMQLVENLARADMTPVDT 188
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
+ + S R+ + + V +M+ +
Sbjct: 189 AKAVKQLMDSLDPKPSLADLGKRLGRSKAWVHQMLSLGSEDAQAVAEYLGVPLESIGQTD 248
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
I K ++D ++ + + + ++ E+ +S K
Sbjct: 249 ISRMKGWMKDEDKRIVLDAIRASLQAGETLSRVLVDREEDRYEQGLSGK 297
>gi|198282414|ref|YP_002218735.1| parB-like partition protein [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198246935|gb|ACH82528.1| parB-like partition protein [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 412
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 10/229 (4%)
Query: 42 ISIHSIVPNPHNPRNYF--------ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+++ I P+P PR F LE L +SI HG++QP+ V + +G Y+IIA
Sbjct: 69 LALSEIEPDPEQPRKTFVASGAQDAIDNDLELLKESILQHGVLQPIAVHPVASGRYRIIA 128
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEI--AIVENVQRKDLNPLEEALGYEQLISEY 151
GERR+RA+ A S P + D + + R ++ +E + +
Sbjct: 129 GERRWRASMAARDSGQPCRRKGYDLSRIPAVILEPNTDADRLEMQLVENLARADMTPVDT 188
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
+ + S R+ + + V +M+ +
Sbjct: 189 AKAVKQLMDSLDPKPSLADLGKRLGRSKAWVHQMLSLGSEDAQAVAEYLGVPLESIGQTD 248
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
I K ++D ++ + + + ++ E+ +S K
Sbjct: 249 ISRMKGWMKDEDKRIVLDAIRASLQAGETLSRVLVDREEDRYEQGLSGK 297
>gi|94498836|ref|ZP_01305379.1| ParB-like nuclease [Sphingomonas sp. SKA58]
gi|94421704|gb|EAT06762.1| ParB-like nuclease [Sphingomonas sp. SKA58]
Length = 715
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 11/209 (5%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKSHGIIQPL 79
+ +++ E + + + ++ + +P N R +E L SI G+IQ L
Sbjct: 1 MTKTVQIETTAAEPVSGIEIFVPLNKLKKSPKNARKVPHGEAAIEALAASIGHKGLIQNL 60
Query: 80 IVRA-----IDNGLYKIIAGERRF-----RAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
++ G Y + AGE R RA + PV R EI++ EN
Sbjct: 61 VIEPEMKGDKPTGAYFVTAGEGRRLAYLLRAKRKQIRRNHPVRCRLDTENDPSEISLDEN 120
Query: 130 VQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
V R ++P ++ + +L G+ +IG+ G S V LR+ + + ++ R++
Sbjct: 121 VTRTPMHPADQFERFRELADGKGWGAEEIGARFGVSGGVVKQRLRLGAVSPKLLQVYRED 180
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMS 218
++L T D QV + +
Sbjct: 181 GLTLDQLMAFAITEDHARQEQVFENLHHN 209
>gi|226227694|ref|YP_002761800.1| ParB-like partition protein family protein [Gemmatimonas aurantiaca
T-27]
gi|226090885|dbj|BAH39330.1| ParB-like partition protein family protein [Gemmatimonas aurantiaca
T-27]
Length = 581
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ ++ + T +++ + +P NPR + +E L S++ HG + +++R
Sbjct: 25 APEAAPEATVRRAAVPMRVALRQVHASPSNPRKIITLDEIEALGASLQQHGQLTRVLLRP 84
Query: 84 I--------DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
+ Y++ AG RR AA +++ +R +D+ S L + EN+QR D+
Sbjct: 85 MATPKGADPSVQHYELAAGHRRSLAALHLGWTDIDADVREMDDHSFLMVLWAENLQRADV 144
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
P++EA+G L + G+ I + +G+ ++V L +L+L + ++ + + + H
Sbjct: 145 PPMDEAIGIRDLQAA-GWDLAAIAAEIGRPEAYVRGRLALLQLSPAAQQSMHVGLLPVTH 203
Query: 196 ARTLVS 201
A+ L
Sbjct: 204 AQELAK 209
>gi|160885889|ref|ZP_02066892.1| hypothetical protein BACOVA_03894 [Bacteroides ovatus ATCC 8483]
gi|293372917|ref|ZP_06619286.1| ParB-like protein [Bacteroides ovatus SD CMC 3f]
gi|156108702|gb|EDO10447.1| hypothetical protein BACOVA_03894 [Bacteroides ovatus ATCC 8483]
gi|292631985|gb|EFF50594.1| ParB-like protein [Bacteroides ovatus SD CMC 3f]
Length = 572
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
I I I P+P NPR F+ LE+L +I+ G++QP+ VR +
Sbjct: 2 EVQNIRIDLISPSPLNPRKTFDEAALEELASNIEKQGLLQPITVRVAKSEEMTN 55
>gi|237721126|ref|ZP_04551607.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229449961|gb|EEO55752.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 572
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
I I I P+P NPR F+ LE+L +I+ G++QP+ V
Sbjct: 2 EVQNIRIDLISPSPLNPRKTFDEAALEELASNIEKQGLLQPITV 45
>gi|193076434|gb|ABS89954.2| hypothetical protein A1S_3529 [Acinetobacter baumannii ATCC 17978]
Length = 293
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 100/275 (36%), Gaps = 15/275 (5%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV--RAIDNG 87
+++ Q I +H I +P NPR F +DL +SI+ G+ P+I+ D+
Sbjct: 12 DESKANSAKQTEIELHLIDLDPENPRKTFIEAKEKDLEESIRESGVRIPVILIKHPHDDN 71
Query: 88 LYKIIAGERRFRAAKMASLSEVP-------VIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
+ + G RR + + A L ++P + + + E + ++ R + +
Sbjct: 72 RFIVKDGNRRVKNSLRAGLQKIPAVVVESFSELDQLTANTMNEDMTIYDISRAIVRLKAK 131
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
Q+ Y + IV + IL L+ R ++ A
Sbjct: 132 GYSQRQIGKTLAYGDAKVSKIVAITDGLDEEILETLE-DMCNRNLLNDFSAMYEIAVLYR 190
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
+ S E+ + + + +K S+E T +E +S
Sbjct: 191 DHKVDVRAWVEKQSATAKKIGIAEVQKFKKTFETDLEKDKPKSKEVSLNETVIEDILSKA 250
Query: 261 VGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
++ + + +KG+ + E+ + + + LGE
Sbjct: 251 -KESLPLVSKLHKGEI----KDPEEREEVVNSLGE 280
>gi|291557587|emb|CBL34704.1| ParB-like partition proteins [Eubacterium siraeum V10Sc8a]
Length = 337
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPN--PHNPRNYFE 59
+N +K +L GL++ E I I I P +P +
Sbjct: 6 TNIKAKGKLNGGLSSF----------SSLPAEDDTVKITPIPIDMIDPYTESLHPFKSYT 55
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ +++L +SIK +G++QP+IV +G Y IIAG RFRA + ++ + ++RN
Sbjct: 56 VDKIDELAESIKVNGLLQPIIVSRKSDGRYMIIAGHNRFRACQKNNMDTIDAVVRNELTA 115
Query: 120 SSLEIAIVENV--QRKDLNPLEEALGYEQLIS 149
+ ++ +V+ QR L E AL Y+
Sbjct: 116 TQRKLMMVDTNLEQRHKLTAKERALAYKIKQD 147
>gi|260170644|ref|ZP_05757056.1| putative ParB-family protein [Bacteroides sp. D2]
gi|315918989|ref|ZP_07915229.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313692864|gb|EFS29699.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 572
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
I I I P+P NPR F+ LE+L +I+ G++QP+ VR +
Sbjct: 2 EVQNIRIDLISPSPLNPRKTFDEAALEELASNIEKQGLLQPITVRVAKSEEMTN 55
>gi|298480934|ref|ZP_06999129.1| stage 0 sporulation protein J [Bacteroides sp. D22]
gi|298272957|gb|EFI14523.1| stage 0 sporulation protein J [Bacteroides sp. D22]
Length = 571
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
I I I P+P NPR F+ LE+L +I+ G++QP+ V
Sbjct: 2 EVQNIRIDLISPSPLNPRKTFDEAALEELASNIEKQGLLQPITV 45
>gi|330814501|ref|YP_004362676.1| parB-like partition protein [Burkholderia gladioli BSR3]
gi|327374493|gb|AEA65844.1| parB-like partition protein [Burkholderia gladioli BSR3]
Length = 559
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 5/194 (2%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
Q + + I NPR YF+ + ++ SI + G+ P+IVR ID+G Y++IAG RR
Sbjct: 7 QQPTVKLGRIKLGR-NPRTYFDDAKMAEMKASITARGVDTPVIVRPIDDGFYELIAGGRR 65
Query: 98 FRAA--KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
F+AA ++PV +++VD + EIA EN+QR D++P +EA+ +L+ +
Sbjct: 66 FKAALETRGEDYDMPVNVKDVDEVEAEEIAFTENIQRDDMSPGDEAVEAARLLGRCQGDR 125
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI--SLGHARTLVSTSDPLSLAQVIV 213
++ +G SR + + L +L V + +I +S + + VIV
Sbjct: 126 DEAARRIGWSRPTLDSRLALLNCSKDVLIALNTRQILLGHAELLAALSKDNQDRVLPVIV 185
Query: 214 SKKMSVRDTEELVQ 227
++K S+ + +LV+
Sbjct: 186 AEKKSIAEVRKLVE 199
>gi|53793968|ref|YP_112421.1| ParB equivalent nuclease [uncultured bacterium]
gi|114881190|ref|YP_758731.1| KorB partitioning and repressor protein [Pseudomonas aeruginosa]
gi|168998440|ref|YP_001687717.1| KorB [Birmingham IncP-alpha plasmid]
gi|125524|sp|P07674|KORB2_ECOLX RecName: Full=Transcriptional repressor protein korB
gi|14794563|gb|AAK73379.1|AF327712_9 KorB [Cloning vector pRK310]
gi|43776|emb|CAA29790.1| korB protein (AA 1-358) [Klebsiella aerogenes]
gi|45774|emb|CAA68503.1| korB [Plasmid RK2]
gi|45862278|gb|AAS78893.1| KorB [Cloning vector pLAFR]
gi|53137004|emb|CAG30912.1| ParB equivalent nuclease [uncultured bacterium]
gi|53794398|gb|AAU93749.1| KorB [Integration vector pJK202]
gi|114703601|emb|CAK12743.1| KorB partitioning and repressor protein [Pseudomonas aeruginosa]
gi|157277545|tpe|CAJ85737.1| TPA: KorB partitioning and repressor protein [Birmingham IncP-alpha
plasmid]
gi|262117800|dbj|BAI47892.1| KorB [Helper vector pRH210]
gi|262117844|dbj|BAI47935.1| KorB [Helper vector pRH220]
gi|295443870|dbj|BAJ06622.1| KorB [Cloning vector pKS800]
gi|317109828|gb|ADU90767.1| KorB partitioning and repressor protein [uncultured bacterium]
gi|317109914|gb|ADU90852.1| KorB partitioning and repressor protein [uncultured bacterium]
gi|317109997|gb|ADU90934.1| Transcriptional repressor protein korB [uncultured bacterium]
Length = 358
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 13/188 (6%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDL 66
G GL + IG+++ +D+P + + I +PH PR F E + ++
Sbjct: 28 GLGLDS-IGDLSSLLDAPAASQ--GGSGPIELDLDLIDEDPHQPRTADNPGFSPESIAEI 84
Query: 67 CQSIKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+IK G+ P+ VR Y I G RR+R +K A +P I + E
Sbjct: 85 GATIKERGVKSPISVRENQEQPGRYIINHGARRYRGSKWAGKKSIPAFI----DNDYNEA 140
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
V +++ E + G + DI +GKS + + + +L LP + +
Sbjct: 141 DQVIENLQRNELTPREIADFIGRELAKGKKKGDIAKEIGKSPAFITQHVTLLDLPEKIAD 200
Query: 185 MIRKEEIS 192
+
Sbjct: 201 AFNTGRVR 208
>gi|220933050|ref|YP_002509958.1| parB-like partition protein [Halothermothrix orenii H 168]
gi|219994360|gb|ACL70963.1| parB-like partition protein [Halothermothrix orenii H 168]
Length = 314
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 13/230 (5%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
I + I + + R F++EG++ L +SI G +QP+IV+ + ++AGERR+RA
Sbjct: 6 IPLDKIKIDKNQSRQEFDAEGIKQLARSIDEVGQLQPVIVKKNGDEYR-LVAGERRYRAV 64
Query: 102 KMASLSEVPVIIRNVDNKSS---LEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
K +S E + ++ +I ++EN+QR+DLNPLE AL ++ I E T+ +
Sbjct: 65 KKSSSREKIAALILKEDTGESLLKQIQLIENLQREDLNPLERALSIKRFIDENNLTKKEA 124
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV---------STSDPLSLA 209
+G R+ + L IL++P RE + E+ L + + + L
Sbjct: 125 SKKLGVPRTTLTEWLNILEVPPRYREEVIDEDSPLTLSHISIAKALASRTGDPTKLKQLL 184
Query: 210 QVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS 259
V++ ++ ++T+E V + L ++
Sbjct: 185 DVVLKYNLNRKETKESVNLYRKYLHMPMDEAVSVILLRRERQKLSDRLRE 234
>gi|237716187|ref|ZP_04546668.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262407796|ref|ZP_06084344.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644812|ref|ZP_06722555.1| ParB-like protein [Bacteroides ovatus SD CC 2a]
gi|294807615|ref|ZP_06766408.1| ParB-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|229443834|gb|EEO49625.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262354604|gb|EEZ03696.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639845|gb|EFF58120.1| ParB-like protein [Bacteroides ovatus SD CC 2a]
gi|294445051|gb|EFG13725.1| ParB-like protein [Bacteroides xylanisolvens SD CC 1b]
Length = 572
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
I I I P+P NPR F+ LE+L +I+ G++QP+ VR +
Sbjct: 2 EVQNIRIDLISPSPLNPRKTFDEAALEELASNIEKQGLLQPVTVRVAKSEEMTN 55
>gi|148550929|ref|YP_001260359.1| parB-like partition protein [Sphingomonas wittichii RW1]
gi|148503340|gb|ABQ71592.1| parB-like partition protein [Sphingomonas wittichii RW1]
Length = 311
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 51/285 (17%), Positives = 103/285 (36%), Gaps = 40/285 (14%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV-RAIDNGLYKIIAGER 96
+ + + I+ +P NPR F+ L+DL SI + G++QP+IV +GL+ I GER
Sbjct: 23 RVEDLPLDWIMGDPENPRRVFDETELKDLAASIAARGVLQPIIVAPKNGDGLHVIRVGER 82
Query: 97 RFRAAKMASLSEVPVIIRN-VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RFRA+++ +P I+ V+ +L IVEN QR L P + A G E+++
Sbjct: 83 RFRASRLVGRETIPAIVMAVVNRADTLADQIVENDQRAGLTPHDLASGIERML-----GA 137
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
+ + ++ + + + + +R + + + +
Sbjct: 138 GVTQAEIARALGRSKQFVSLYAACADMAPWLRAAIDQMPIRLLYDLHRAARTHGDAVRAY 197
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK-----------------KIS 258
+ D + E K + + + L +
Sbjct: 198 VERLGDENVTLAEGGRFIAGLKASENLPDARLRDVPALSDGQGAERAAPSRPVRAGVGLR 257
Query: 259 SKVGLNIS----------IKHRNNKGQFCIK------YETNEQLK 287
S G +S + G+ + ++ E+++
Sbjct: 258 SMFGTEVSSQPRPLDAVRVTVDGRTGRLVLPERVRVMFDDGEEIE 302
>gi|254422302|ref|ZP_05036020.1| ParB-like nuclease domain family [Synechococcus sp. PCC 7335]
gi|196189791|gb|EDX84755.1| ParB-like nuclease domain family [Synechococcus sp. PCC 7335]
Length = 351
Score = 47.4 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 27 SPEKKTETIPESQDCISIHSIVP-----NPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
E K+ + I + SIV N PR YF+ +E L +SIK HG+++P+++
Sbjct: 18 KEEIKSLKAQSASLEIRVDSIVSLQLPNNMQQPRLYFDPGKMELLKESIKKHGVLEPILL 77
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
R +G Y++I+GERR+R + ++ + ++R + + ++LE A++ ++ +++ +E+
Sbjct: 78 RPRQDGKYEVISGERRWRCCQALGMTTIQAVVRPMSDATALEAALIAHLLSDEISLIEQT 137
Query: 142 LGYEQLISEYGYTQNDIGS 160
L+S N++
Sbjct: 138 ESILGLLSLRLGLSNEVIK 156
>gi|108524582|ref|YP_619804.1| KorB partitioning and repressor protein [Plasmid QKH54]
gi|99644153|emb|CAJ43285.1| KorB partitioning and repressor protein [Plasmid QKH54]
Length = 345
Score = 47.4 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 18/203 (8%)
Query: 1 MSNNYSK-----RRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR 55
MS K + G L + IG+++ +D+PE + + I +P+ PR
Sbjct: 1 MSKAAQKPVDGAKASGMDLGS-IGDLSALMDAPEAP--VANSGPLILDMSLIDEDPNQPR 57
Query: 56 NY----FESEGLEDLCQSIKSHGIIQPLIV--RAIDNGLYKIIAGERRFRAAKMASLSEV 109
F E + ++ +IK+ G+ P+ V D G Y I G RRFR +K A + +
Sbjct: 58 KDENPGFSPESIAEIGATIKARGVKTPISVRENPDDPGRYLINHGARRFRGSKWAEKTTI 117
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
P I + E V +++ E + G + DI +GKS S V
Sbjct: 118 PGFI----DNDYNEADQVIENLQRNDLTPREIADFVGRELAKGKKKGDIAKEIGKSASFV 173
Query: 170 ANILRILKLPSSVREMIRKEEIS 192
+ + +L LP + E +
Sbjct: 174 SQHVTLLDLPDPIAEAFNSGRVK 196
>gi|28558833|ref|NP_788093.1| putative plasmid stabilization protein [Ruegeria sp. PR1b]
gi|22726384|gb|AAN05179.1| RC106 [Ruegeria sp. PR1b]
Length = 507
Score = 47.4 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 77/213 (36%), Gaps = 14/213 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M+ ++ + ++ ++ T + I + + P+ N R S
Sbjct: 7 MAKTTTRPK---------PVTSKKTEAAGTATPYGAANIRLIPLDQLEPSRLNVRKVAPS 57
Query: 61 EGLE-DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRN 115
+ +L SI+ GI Q L+V A+ + + AG RR + A+ + +
Sbjct: 58 ASDDAELLASIRETGIKQNLVVHALSETRFAVDAGGRRLKALKQLAEDGVIPADHTVPCL 117
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
V+++ + + ++ + + G ++++I G S V L++
Sbjct: 118 VEDERNAVLTSATENLQRAAMHPADQFEAFDKMIGEGRSEDEIALKFGVSVDLVRRRLKL 177
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
++ + E R +++L T D
Sbjct: 178 ARVALEIIEQFRAGDLTLECVMAFTLTDDHDRQ 210
>gi|218665184|ref|YP_002426139.1| parB family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517397|gb|ACK77983.1| parB family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 417
Score = 47.4 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 10/229 (4%)
Query: 42 ISIHSIVPNPHNPRNYF--------ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+++ I P+P PR F LE L +SI HG++QP+ V + +G Y+IIA
Sbjct: 69 LALSEIEPDPEQPRKTFVASGAQDAIDNDLELLKESILQHGVLQPIAVHPVASGRYRIIA 128
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEI--AIVENVQRKDLNPLEEALGYEQLISEY 151
GERR+RA+ A S P + D + + R ++ +E + +
Sbjct: 129 GERRWRASMAARDSGQPCGRKGYDLSRIPAVILEPDTDADRLEMQLVENLARADMTPVDT 188
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
+ + S R+ + + V +M+ +
Sbjct: 189 AKAVKQLMDSLDPKPSLADLGKRLGRSKAWVHQMLSLGSEDAQAVAEYLGVPLESIGQTD 248
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
I K ++D ++ + + + ++ E+ +S K
Sbjct: 249 ISRMKGWMKDEDKRIVLDAIRASLQAGETLSRVLVDREEDRYEQGLSGK 297
>gi|255589220|ref|XP_002534882.1| conserved hypothetical protein [Ricinus communis]
gi|223524430|gb|EEF27503.1| conserved hypothetical protein [Ricinus communis]
Length = 454
Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 43 SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRA 100
+ I NPR YF+ + + +L +SI++HG+ P+IVR I D+ +++IAG RR+R
Sbjct: 8 PLKRIKLGR-NPRTYFDPKAMAELTESIRAHGVDTPIIVRPITEDDFDFEVIAGGRRYRG 66
Query: 101 AKMAS--LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
A A +P+++++VD + IA+ EN+QR +L+P EEA+ +L+ +G ++
Sbjct: 67 AMDAHGEDFPMPIVVKDVDEVEARRIALTENIQRDNLSPSEEAVDAAELLGLHGGDRDVT 126
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
I+G SRS + + L +L +V + + + +I++ HA L
Sbjct: 127 AKILGWSRSTLDSRLALLNCSKAVLDALSERKINIAHAELL 167
>gi|241589944|ref|YP_002979969.1| parB-like partition protein [Ralstonia pickettii 12D]
gi|240868656|gb|ACS66315.1| parB-like partition protein [Ralstonia pickettii 12D]
Length = 345
Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 52/279 (18%), Positives = 101/279 (36%), Gaps = 29/279 (10%)
Query: 2 SNNYSKRRLG----RGL-------AALIGEVNQSIDSPEKKTETIPESQ----------- 39
S+N ++ RLG +GL A + ++ + + + E+
Sbjct: 5 SSNPNRSRLGSALRKGLATERGEVDARLNANSKVSEEGTSSSASANEALHYGGRGNTSSV 64
Query: 40 ---DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAG 94
I + V NP NPR ++ E ++ L +K G + + V Y II G
Sbjct: 65 KLRQQIRLADCVSNPFNPREFYNPEAIDALAVKLKRDGQYEAIKVTKNHRFPGKYVIIDG 124
Query: 95 ERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
E R RA K + I + +A N R ++A+ + +L+ +
Sbjct: 125 EYRSRAKKSLGDEFIDGEIFPELSDADLYLVANRINKDRTAQTVFDDAIAWTRLLENKVF 184
Query: 154 TQNDIGSIV-GKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI 212
D + S++ V+ L + +LPS + + + E +G A + +
Sbjct: 185 PDQDALAATLDLSKAQVSKTLSLTELPSHLLRSMAENEEGVGLATAYNIKLIYKRKGEEL 244
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ + EL +Q + +R + E R + +
Sbjct: 245 AEQILERVLAGELTVKQLQEMNRRAEGGEPLRRTKAHYR 283
>gi|115360742|ref|YP_777879.1| parB-like partition proteins [Burkholderia ambifaria AMMD]
gi|115286070|gb|ABI91545.1| ParB family protein [Burkholderia ambifaria AMMD]
Length = 343
Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 86/220 (39%), Gaps = 34/220 (15%)
Query: 1 MSNNYSK-----------RRLGRGLA----AL---IGEVNQSIDSPEKKTETIP------ 36
M+ SK L RGLA AL + E + + +
Sbjct: 1 MAKETSKDKKPTGNLHLAAGLLRGLAQENAALETRLPEPPPASNPTAEAATPAAPTAATP 60
Query: 37 ------ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ +++ +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 ADAHDLGAPQRVAVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGK 120
Query: 91 --IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+I G+RR R + + + + IA N + ++A+ +++L
Sbjct: 121 LVVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRL 180
Query: 148 ISEYGYTQNDI-GSIVGKSRSHVANILRILKLPSSVREMI 186
+ E + + +GK ++ ++ L + LP+++ E +
Sbjct: 181 LDEKVFPDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 220
>gi|295701498|ref|YP_003610499.1| parB-like partition protein [Burkholderia sp. CCGE1002]
gi|295441821|gb|ADG20988.1| parB-like partition protein [Burkholderia sp. CCGE1002]
Length = 558
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 52/161 (32%), Positives = 95/161 (59%), Gaps = 5/161 (3%)
Query: 43 SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA--IDNGLYKIIAGERRFRA 100
+ I NPR YF+ + + +L +SI++HG+ P+IVR D+ +++IAG RR+R
Sbjct: 7 PLKRIKLGR-NPRTYFDPKAMAELTESIRAHGVDTPIIVRPVVEDDFDFEVIAGGRRYRG 65
Query: 101 AKMAS--LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
A A +P+++++VD + IA+ EN+QR +L+P EEA+ +L+ +G ++
Sbjct: 66 AMDAHGEDFPMPIVVKDVDEVEARRIALTENIQRDNLSPAEEAVDAAELLGLHGGDRDVT 125
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
I+G SRS + + L +L +V + + + +I++ HA L
Sbjct: 126 AKILGWSRSTLDSRLALLNCSKAVLDALSERKINIAHAELL 166
>gi|54027650|ref|YP_121891.1| putative plasmid partitioning protein [Nocardia farcinica IFM
10152]
gi|54019158|dbj|BAD60527.1| putative plasmid partitioning protein [Nocardia farcinica IFM
10152]
Length = 305
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 109/282 (38%), Gaps = 30/282 (10%)
Query: 11 GRG----LAALIGEVNQSIDSPEKKTET------------IPESQDCISIHSIVPNPHNP 54
GRG LA L+G ++ T + + I + +V NP NP
Sbjct: 3 GRGGRANLADLVGSTGKNSTVDGVNARTSSPAKGPTPEVMVNGAPLEIKLEDLVANPLNP 62
Query: 55 RNYFESEGLE---------DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMA- 104
R + + L L +++ + P + + + Y +I G RR AA+
Sbjct: 63 RETMDVDDLASIVEIQLQPALIIGREAYLKLWPELKSELGDAKYVVINGCRRLEAARKFG 122
Query: 105 --SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
+L V S +I ENV+R++L+ +EEA E L+S+ G I+
Sbjct: 123 RTTLECVRKDEVADSRASLRAASIRENVERENLDVIEEAKAVEALVSDCDGNGARAGQIL 182
Query: 163 GKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDT 222
GK++ V+ +LKL ++ +R E+++ AR L +A+ + R+
Sbjct: 183 GKTKMWVSQRRALLKLTPELQAKLRAGELAIREARELGRVPAEEQVARWKAQLEKKEREQ 242
Query: 223 EELVQEQDNKKEKRK--KIFEGSREKEKYLTDLEKKISSKVG 262
++ + KI + ++ + L + +
Sbjct: 243 AGETSGSNSSRRDVDTVKIVKTLKKWDADTAVLASALFVHLD 284
>gi|320107560|ref|YP_004183150.1| parB-like partition protein [Terriglobus saanensis SP1PR4]
gi|319926081|gb|ADV83156.1| parB-like partition protein [Terriglobus saanensis SP1PR4]
Length = 529
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ + + + NPR FE + L++L +SI+ G++ PL+VR + ++I+
Sbjct: 6 VNASEYRDLPLAMLTESTTNPRRTFEDDALKELAESIRIQGVLSPLLVRPLTEQGFEIVF 65
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ--LISEY 151
G RR+RAA+MA ++ +PV I+++ + +LE +VEN+QR+D++PLEEA G+ + E
Sbjct: 66 GARRYRAARMAEVATIPVRIKHLTDAEALEAQLVENLQRRDVHPLEEAQGFRALLNLEEP 125
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
Y+ + + GKS +VA L++ +L +V + ++EI +GHA L +
Sbjct: 126 KYSIEQLAAKTGKSPVYVATRLKLTELTQNVVDAFYRDEIGVGHALLLAKLQPAQQEQAL 185
Query: 212 IVSKKMS 218
K
Sbjct: 186 AACFKED 192
>gi|257091552|ref|YP_003165195.1| hypothetical protein CAP2UW1_4616 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048561|gb|ACV37748.1| hypothetical protein CAP2UW1_4616 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 346
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 15/188 (7%)
Query: 13 GLAAL--IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDL 66
GL L IG+++ ++ PE + + + I +PH PR F E LE+L
Sbjct: 23 GLD-LESIGDLSDLLNQPETVARSF--RPLELPLDLIDEDPHQPRTKDNPGFLPESLEEL 79
Query: 67 CQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
++I+ G+ P+ VR + Y I G RR RA+++ + +P + + E
Sbjct: 80 ARTIRLRGVKTPISVRDNPDAAGRYLINHGARRARASRLVYKTTIPAFV----DNDYNEA 135
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
V +++ E + G + DI +GKS + V+ + +L LP + E
Sbjct: 136 DQVIENLQRNELIPREIADFIGRELAKGKKKGDIAKELGKSPAFVSQHVTLLDLPDPIAE 195
Query: 185 MIRKEEIS 192
Sbjct: 196 AFNSGRCR 203
>gi|197294854|ref|YP_002153395.1| putative chromosome partitioning protein [Burkholderia cenocepacia
J2315]
gi|195944333|emb|CAR56934.1| putative chromosome partitioning protein [Burkholderia cenocepacia
J2315]
Length = 343
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 45/220 (20%), Positives = 89/220 (40%), Gaps = 34/220 (15%)
Query: 1 MSNNYSK-----------RRLGRGLA----AL---IGEVNQSIDSPEKKTETIP------ 36
M+ + SK L RGLA AL + E + + + T
Sbjct: 1 MAKDTSKDKKPTGNLHLAAGLLRGLAQENAALETRLPEPTAAPAAVVEATPASAPAAATP 60
Query: 37 ------ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ + + +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 AGTADLGAPQKVLVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGK 120
Query: 91 --IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+I G+RR R + + + + IA N + ++A+ +++L
Sbjct: 121 LVVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRL 180
Query: 148 ISEYGY-TQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+ E + QN + +GK ++ ++ L + LP+++ E +
Sbjct: 181 LDEKVFSDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 220
>gi|328675580|gb|AEB28255.1| Chromosome (plasmid) partitioning protein ParB / Stage 0
sporulation protein J [Francisella cf. novicida 3523]
Length = 304
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + + + + P+ + PR F + ++ L SIK +G+IQP+IV A
Sbjct: 34 QELNEQASKVGQLFELPLTIVKPDANQPRKTF--KNIDSLADSIKENGVIQPIIVTAKKA 91
Query: 87 G-LYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
++ IIAGERR+ A+K A L+ +P I + + + + + ++EN QR++++P EEA
Sbjct: 92 DGIHYIIAGERRYLASKQAGLTTIPCIVRQEESDANIVLLQLLENDQRENVSPFEEADAL 151
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
LI ++DI ++G+ S ++ L+I ++RE
Sbjct: 152 RDLIENKNVKKSDIAKVLGRDNSWISMRLKIADADDNIRE 191
>gi|172065040|ref|YP_001815752.1| parB-like partition protein [Burkholderia ambifaria MC40-6]
gi|171997282|gb|ACB68199.1| parB-like partition protein [Burkholderia ambifaria MC40-6]
Length = 343
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 86/220 (39%), Gaps = 34/220 (15%)
Query: 1 MSNNYSK-----------RRLGRGLA----AL---IGEVNQSIDSPEKKTETIP------ 36
M+ SK L RGLA AL + E + + +
Sbjct: 1 MAKETSKDKKPTGNLHLAAGLLRGLAQENAALETRLPEPTPASNPAAEAATPAAPTATTP 60
Query: 37 ------ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ +++ +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 ADAHDLGAPQRVAVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGK 120
Query: 91 --IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+I G+RR R + + + + IA N + ++A+ +++L
Sbjct: 121 LVVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRL 180
Query: 148 ISEYGYTQNDI-GSIVGKSRSHVANILRILKLPSSVREMI 186
+ E + + +GK ++ ++ L + LP+++ E +
Sbjct: 181 LDEKVFPDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 220
>gi|241762735|ref|ZP_04760799.1| parB-like partition protein [Acidovorax delafieldii 2AN]
gi|241368154|gb|EER62346.1| parB-like partition protein [Acidovorax delafieldii 2AN]
Length = 332
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 7/194 (3%)
Query: 13 GLAALIGEVNQSIDSPEKKTETIPESQDCI---SIHSIVPNPHNPRNYFESEGLEDLCQS 69
GLA + + E+ +Q I + + NP N R + + +++L S
Sbjct: 39 GLAVAVPTPAVADSGRAFSAESPLPNQQQIVRAPLEKVHENPLNARYIYNPDVVKELAAS 98
Query: 70 IKSHGIIQPLIVRAIDNG--LYKIIAGERRFRA-AKMASLSEVPVIIRNVDNKSSLEIAI 126
I + G + P Y +I G R +A A + VI R+ + ++
Sbjct: 99 IATRGQMVPASAIEHPTIVGDYLLIDGHYRKKALASAGQHTIDLVIRRHESDIELYRMSW 158
Query: 127 VENVQRKDLNPLEEALGY-EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
+ N +R +PL+ A + + + T+N I ++G S S V + +L LP++ +
Sbjct: 159 LLNEERNAQSPLDNAFAWRKLIDKGLVQTENQIAELLGVSLSTVNKTIALLGLPTAALDK 218
Query: 186 IRKEEISLGHARTL 199
+R G
Sbjct: 219 MRDRPEKFGVFTGY 232
>gi|187921637|ref|YP_001890669.1| parB-like partition protein [Burkholderia phytofirmans PsJN]
gi|187720075|gb|ACD21298.1| parB-like partition protein [Burkholderia phytofirmans PsJN]
Length = 352
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 105/268 (39%), Gaps = 10/268 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL--IVRAIDNGLYKIIA 93
P +++ +I P+P NPR+++ + +L ++ G Q + I + G Y +
Sbjct: 84 PGQVIELALKTIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQAIHVIPDYDNPGTYYVSD 143
Query: 94 GERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLNPLEEALGYEQL-ISEY 151
G RR RA K A+ V I+ ++ S ++ NVQR + A+ +++ +
Sbjct: 144 GGRRVRALKEANRETVKAIVIDLPIGIQSYKLGYDLNVQRDSQTVFDNAVVWKRFLDDRH 203
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
+Q ++ +G S VA L I KLP V + G +
Sbjct: 204 FQSQKELAEHLGLDESTVAVALSIAKLPEVVMHEMVARPDRFGSNMAYQVGRYHTARGAD 263
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN 271
+ ++ +++L Q K + + S K +++ K+ +S+
Sbjct: 264 ATLRLINKILSDDLSTRQVADIVKGRASAQES-TKPAGRQRYAQRLEIKLD-GVSVGDLK 321
Query: 272 NKG--QFCIKYETN--EQLKIICSLLGE 295
+ G + ++ + E+ I + +
Sbjct: 322 SYGDDRIELRLKGLTREKRDDILRQIEK 349
>gi|167583697|ref|ZP_02376085.1| ParB-like partition protein [Burkholderia ubonensis Bu]
Length = 353
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 45/249 (18%), Positives = 99/249 (39%), Gaps = 5/249 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P +S+ +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESSQYRAWRLENRYAPGQVIELSLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G+Y + G RR RA K A+ V I+ ++ S ++ NVQR
Sbjct: 127 HVIPDYDNPGMYFVSDGGRRVRALKEANKESVKAIVIDLPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP ++ + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELAEHLGLDESTVAVALSIGKLPEAIMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHNARGTDATLRLINKIVSDDLSTRQVSDIVKGRAAAQETP-KPASRQRYAQ 305
Query: 256 KISSKVGLN 264
++ K+G
Sbjct: 306 RLEIKLGGK 314
>gi|186472977|ref|YP_001860319.1| parB-like partition protein [Burkholderia phymatum STM815]
gi|184195309|gb|ACC73273.1| parB-like partition protein [Burkholderia phymatum STM815]
Length = 354
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 107/268 (39%), Gaps = 10/268 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIA 93
P + + +I P+P NPR ++ + +L ++ G Q + V + Y +
Sbjct: 83 PGQIIELPLKAIKPSPFNPRYFYVKSSIAELAVNLAKQGQQQAIHVIPDYDNPGSYFVSD 142
Query: 94 GERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLNPLEEALGYEQL-ISEY 151
G RR RA K A+ V ++ ++ S ++ NVQR + A+ + + ++
Sbjct: 143 GGRRVRALKEANKETVKALVVDLPIGIQSYKLGYDLNVQRDSQTVFDNAVVWRRFLDEKH 202
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
+Q ++ +G S +A L I KLP +V + + G +
Sbjct: 203 FQSQKELAEHLGLDESTIAVALSIAKLPETVMQEMVARADRFGSNMAYQVGRYHAARGTE 262
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISI---- 267
+ ++ +++L Q K + + S K +++ K+G +S+
Sbjct: 263 STLRLINKILSDDLSTRQVADIVKGRATAQES-AKPAGRQRYAQRLDIKLG-GVSVGDLK 320
Query: 268 KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ +++ + ++ + E+ I + +
Sbjct: 321 SYGDDRLELKLRGLSREKRDEILRQIEQ 348
>gi|291557372|emb|CBL34489.1| ParB-like partition proteins [Eubacterium siraeum V10Sc8a]
Length = 459
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + P+ E I ++ + ++P + E + + S+K G+ QP I
Sbjct: 156 APKEPEKPKDAPRRGKEQIVYIKLNELHAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAI 215
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSLEIAIVENVQRKDLNPLE 139
VR ++G Y+I++G RR +A+++A +++P I+RN D+++ ++ QR+++ P E
Sbjct: 216 VRPREDGGYEIVSGHRRQKASELAGYADMPCIVRNLTDDEAITQMVEDNLNQREEILPSE 275
Query: 140 EALGYEQLISEYGYTQNDIGSIVG 163
A + + + + +
Sbjct: 276 RAKALKMQLEAIKHQGSRTSGQID 299
>gi|134287591|ref|YP_001109757.1| ParB family protein [Burkholderia vietnamiensis G4]
gi|134132241|gb|ABO59976.1| ParB family protein [Burkholderia vietnamiensis G4]
Length = 559
Score = 47.0 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 5/199 (2%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
+ P Q I + I NPR YF+ + ++ SI + G+ P+IVR +D+G +++I
Sbjct: 2 QQTPLQQPTIKLGRIKLGR-NPRTYFDDAKMAEMKASISARGVDTPVIVRPLDDGFFELI 60
Query: 93 AGERRFRAA--KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
AG RR++AA ++PV +++VD+ + EIA EN+QR D++P +EA+ +L+
Sbjct: 61 AGGRRYKAALETRGDDYDMPVNVKDVDSVEAEEIAFTENIQRDDMSPGDEAVEAARLLGR 120
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI--SLGHARTLVSTSDPLSL 208
+ + +G S + + L +L + V + +I +S + +
Sbjct: 121 CQGDREEAARRIGWSLPTLNSRLALLNCSNEVLIALNTRQILLGHAELLAALSKENQDRV 180
Query: 209 AQVIVSKKMSVRDTEELVQ 227
VI+S+K SV D +LV+
Sbjct: 181 LSVIISEKKSVTDVRKLVE 199
>gi|323484995|ref|ZP_08090349.1| hypothetical protein HMPREF9474_02100 [Clostridium symbiosum
WAL-14163]
gi|323401737|gb|EGA94081.1| hypothetical protein HMPREF9474_02100 [Clostridium symbiosum
WAL-14163]
Length = 457
Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + P+ E I ++ + ++P + E + + S+K G+ QP I
Sbjct: 154 APKEPEKPKDAPRRGKEQIVYIKLNELHAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAI 213
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSLEIAIVENVQRKDLNPLE 139
VR ++G Y+I++G RR +A+++A +++P I+RN D+++ ++ QR+++ P E
Sbjct: 214 VRPREDGGYEIVSGHRRQKASELAGYADMPCIVRNLTDDEAITQMVEDNLNQREEILPSE 273
Query: 140 EALGYEQLISEYGYTQNDIGSIVG 163
A + + + + +
Sbjct: 274 RAKALKMQLEAIKHQGSRTSGQID 297
>gi|237510667|ref|ZP_04523382.1| ParB family protein [Burkholderia pseudomallei MSHR346]
gi|235002872|gb|EEP52296.1| ParB family protein [Burkholderia pseudomallei MSHR346]
Length = 355
Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 4/232 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + S P + + +I P+P NPR+++ + +L ++ G Q
Sbjct: 68 ADESSQYRSWRIDNRYQPGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQA 127
Query: 79 LIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDL 135
+ V + Y + G RR RA K A+ V I+ ++ S ++ NVQR
Sbjct: 128 IHVIPDYDNPGSYFVSDGGRRVRALKEANKESVKAIVVDLPIGIQSYKLGYDLNVQRDSQ 187
Query: 136 NPLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
+ A+ +++ +Y +Q ++ +G S VA L I KLP +V + + G
Sbjct: 188 TVFDNAIVWKRFLEEKYFQSQKELAEHLGLDESTVAVALSIGKLPETVMQEMVARPDRFG 247
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ + ++ +++L Q K + + S +
Sbjct: 248 SNMAYQVGRYHAARGTDSTLRLINKILSDDLSTRQVADIVKGRATTQESPKP 299
>gi|29826513|ref|NP_828819.1| putative plasmid partitioning protein [Streptomyces avermitilis
MA-4680]
gi|29611311|dbj|BAC75354.1| putative plasmid partitioning protein, ParB nuclease [Streptomyces
avermitilis MA-4680]
Length = 343
Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 26/230 (11%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQ-----DCISIHSIVPNPHNPR 55
MS K +LGRG + G + ETI + + +I NP NPR
Sbjct: 1 MS---KKDQLGRG--SSFGSTSNRSARRNAINETINGGVGTADLTDLPVPAISDNPDNPR 55
Query: 56 NY-----FESEGLEDLCQSIKSHGIIQPLIVRAIDNG--------LYKIIAGERRFRAAK 102
N+ + E + ++ + VR+ + Y +I G RR AA+
Sbjct: 56 NHLRNLEYTVESVREVGVILPIVVGTVDAYVRSRPDRANDLDPGAQYVVIDGHRRLEAAR 115
Query: 103 MASLSEVPVIIRN---VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
L+ +PV + + ++ LE A + N R+D+ LEEA +QL+ YG +Q
Sbjct: 116 QVGLATIPVRVDDARLSSDEKLLESAFIANYHREDMTDLEEAHALKQLVDYYGGSQTKAC 175
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLA 209
+ S S +++ L +LKL +++ + E H R L S A
Sbjct: 176 RRLSMSASTLSSKLSLLKLSPELQKDLMTGERKTEHVRNLSKLSPEAQKA 225
>gi|167900060|ref|ZP_02487461.1| ParB family protein [Burkholderia pseudomallei 7894]
gi|167924663|ref|ZP_02511754.1| ParB family protein [Burkholderia pseudomallei BCC215]
Length = 355
Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 4/232 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + S P + + +I P+P NPR+++ + +L ++ G Q
Sbjct: 68 ADESSQYRSWRIDNRYQPGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQA 127
Query: 79 LIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDL 135
+ V + Y + G RR RA K A+ V I+ ++ S ++ NVQR
Sbjct: 128 IHVIPDYDNPGSYFVSDGGRRVRALKEANKESVKAIVVDLPIGIQSYKLGYDLNVQRDSQ 187
Query: 136 NPLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
+ A+ +++ +Y +Q ++ +G S VA L I KLP +V + + G
Sbjct: 188 TVFDNAIVWKRFLEEKYFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMVARPDRFG 247
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ + ++ +++L Q K + + S +
Sbjct: 248 SNMAYQVGRYHAARGTDSTLRLINKILSDDLSTRQVADIVKGRATTQESPKP 299
>gi|327309756|ref|YP_004336654.1| parB-like partition protein [Pseudonocardia dioxanivorans CB1190]
gi|326955091|gb|AEA28787.1| parB-like partition protein [Pseudonocardia dioxanivorans CB1190]
Length = 291
Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 57/262 (21%), Positives = 111/262 (42%), Gaps = 20/262 (7%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR----NYFESEGLEDLCQSIKSHGIIQ 77
+P+ + E + + + I PNP N R + + + +L +I++HG++Q
Sbjct: 30 EVPPPAPDAQPEVADLGESTLPLADIAPNPLN-RPGAEDETDDDEFRELVDTIRTHGVLQ 88
Query: 78 PLIVRAIDNGL--------------YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
P++V + D + + G RR RAA A L+EVP ++ + S E
Sbjct: 89 PILVCSADAFTSRYPDHAGAIDGASWVALIGNRRVRAAADAGLTEVPAVVNDDRITSMYE 148
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ +VEN RK+L+PL+EA +++ E TQ ++ VG++ +V+ L +L L +R
Sbjct: 149 VMLVENGHRKNLSPLDEAEAMSRVLKEEHITQKELARRVGRTAMYVSQRLALLNLIPELR 208
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ L AR + + + A + ++ ++ + +
Sbjct: 209 NAFAVGILKLEVARQIGTLPEDEQQAIADAGQPYRLQPAGGPKSGVSTRRISAGTPQQAA 268
Query: 244 REKEKYLTDLE-KKISSKVGLN 264
K T E ++ +G
Sbjct: 269 ESIRKLFTPDELAELIRLLGTR 290
>gi|126445444|ref|YP_001064281.1| ParB family protein [Burkholderia pseudomallei 668]
gi|134284034|ref|ZP_01770729.1| ParB family protein [Burkholderia pseudomallei 305]
gi|167721888|ref|ZP_02405124.1| ParB family protein [Burkholderia pseudomallei DM98]
gi|217423208|ref|ZP_03454710.1| ParB family protein [Burkholderia pseudomallei 576]
gi|254185582|ref|ZP_04892169.1| ParB family protein [Burkholderia pseudomallei 1655]
gi|126224935|gb|ABN88440.1| ParB family protein [Burkholderia pseudomallei 668]
gi|134244645|gb|EBA44744.1| ParB family protein [Burkholderia pseudomallei 305]
gi|184209816|gb|EDU06859.1| ParB family protein [Burkholderia pseudomallei 1655]
gi|217394116|gb|EEC34136.1| ParB family protein [Burkholderia pseudomallei 576]
Length = 355
Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 4/232 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + S P + + +I P+P NPR+++ + +L ++ G Q
Sbjct: 68 ADESSQYRSWRIDNRYQPGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQA 127
Query: 79 LIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDL 135
+ V + Y + G RR RA K A+ V I+ ++ S ++ NVQR
Sbjct: 128 IHVIPDYDNPGSYFVSDGGRRVRALKEANKESVKAIVVDLPIGIQSYKLGYDLNVQRDSQ 187
Query: 136 NPLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
+ A+ +++ +Y +Q ++ +G S VA L I KLP +V + + G
Sbjct: 188 TVFDNAIVWKRFLEEKYFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMVARPDRFG 247
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ + ++ +++L Q K + + S +
Sbjct: 248 SNMAYQVGRYHAARGTDSTLRLINKILSDDLSTRQVADIVKGRATTQESPKP 299
>gi|110004189|emb|CAK98527.1| hypothetical spoj partition protein parb n-terminal truncated
[Spiroplasma citri]
Length = 107
Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 219 VRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD-LEKKISSKVGLNISIKHRNNKGQFC 277
R EELV+E + K K ++ + + LE KI ++G + I +
Sbjct: 31 ARQVEELVKEYNPKITKPLIEHSEKDSSKRAVNEFLENKIMRRLGTKVVIDTD----KIL 86
Query: 278 IKYETNEQLKIICSLLG 294
IKY + L I LLG
Sbjct: 87 IKYTGIKDLNRILELLG 103
>gi|167564663|ref|ZP_02357579.1| parB family protein [Burkholderia oklahomensis EO147]
gi|167571829|ref|ZP_02364703.1| parB family protein [Burkholderia oklahomensis C6786]
Length = 355
Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 90/231 (38%), Gaps = 4/231 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I P+P NPR+++ + +L ++ G Q +
Sbjct: 69 DESSQYRAWRIENRYQPGQVIELPLKTIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 128
Query: 80 IVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
V + Y + G RR RA K A+ V I+ ++ S ++ NVQR
Sbjct: 129 HVIPDYDNPGSYFVSDGGRRVRALKEANKESVKAIVIDLPIGIQSYKLGYDLNVQRDSQT 188
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ +++ + +Q ++ +G S VA L I KLP +V + + G
Sbjct: 189 VFDNAVVWKRFLEESHFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMVARPDRFGS 248
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ + ++ +++L Q K + + S +
Sbjct: 249 NMAYQVGRYHTARGTDATLRLINKILSDDLSTRQVADIVKGRATTQESPKP 299
>gi|91777112|ref|YP_552320.1| ParB family protein [Burkholderia xenovorans LB400]
gi|91689772|gb|ABE32970.1| ParB family protein [Burkholderia xenovorans LB400]
Length = 352
Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 104/268 (38%), Gaps = 10/268 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL--IVRAIDNGLYKIIA 93
P +++ +I P+P NPR+++ + +L ++ G Q + I + G Y +
Sbjct: 84 PGQVIELALKTIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQAIHVIPDYDNPGTYFVSD 143
Query: 94 GERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLNPLEEALGYEQL-ISEY 151
G RR RA K A+ V I+ ++ S ++ NVQR + A+ + + +
Sbjct: 144 GGRRVRALKEANKESVKAIVVDLPIGIQSYKLGYDLNVQRDSQTVFDNAVVWRRFLDDRH 203
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
+Q ++ +G S VA L I KLP V + G +
Sbjct: 204 FQSQKELAEHLGLDESTVAVALSISKLPEVVMHEMVARPDRFGSNMAYQVGRYHTARGAD 263
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN 271
+ ++ +++L Q K + + S K +++ K+ +S+
Sbjct: 264 ATLRLINKILSDDLSTRQVADIVKGRASAQES-TKPAGRQRYAQRLEIKLD-GVSVGDLK 321
Query: 272 NKG--QFCIKYETN--EQLKIICSLLGE 295
+ G + ++ + E+ I + +
Sbjct: 322 SYGDDRIELRLKGLTREKRDDILRQIEK 349
>gi|83717132|ref|YP_440559.1| parB family protein [Burkholderia thailandensis E264]
gi|167579245|ref|ZP_02372119.1| parB family protein [Burkholderia thailandensis TXDOH]
gi|167614632|ref|ZP_02383267.1| parB family protein [Burkholderia thailandensis Bt4]
gi|257141220|ref|ZP_05589482.1| parB family protein [Burkholderia thailandensis E264]
gi|83650957|gb|ABC35021.1| parB family protein [Burkholderia thailandensis E264]
Length = 355
Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 45/250 (18%), Positives = 97/250 (38%), Gaps = 4/250 (1%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P + + +I P+P NPR+++ + +L ++ G Q +
Sbjct: 69 DESSQYRTWRIENRYQPGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 128
Query: 80 IVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
V + Y + G RR RA K A+ V I+ ++ S ++ NVQR
Sbjct: 129 HVIPDYDNPGSYFVSDGGRRVRALKEANKESVKAIVIDLPIGIQSYKLGYDLNVQRDSQT 188
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ +++ +Y +Q ++ +G S VA L I KLP +V + + G
Sbjct: 189 VFDNAIVWKRFLEEKYFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMVARPDRFGS 248
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q K + + S + ++
Sbjct: 249 NMAYQVGRYHTARGTDSTLRLINKILSDDLSTRQVADIVKGRASAQESPKPASRQRYAQR 308
Query: 256 KISSKVGLNI 265
G+++
Sbjct: 309 HEIKLNGMSV 318
>gi|86139530|ref|ZP_01058098.1| hypothetical protein MED193_00240 [Roseobacter sp. MED193]
gi|85823713|gb|EAQ43920.1| hypothetical protein MED193_00240 [Roseobacter sp. MED193]
Length = 719
Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 72/189 (38%), Gaps = 5/189 (2%)
Query: 25 IDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE-DLCQSIKSHGIIQPLIVRA 83
++ I ++ + P+P N R S + +L SI+ GI Q L+V A
Sbjct: 16 SEAAGSAAPEGAADIRMIPLNQLEPSPLNVRKVAASASDDAELFASIRETGIKQNLVVHA 75
Query: 84 IDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+ + + + AG RR + A+ + + ++++ + + ++
Sbjct: 76 LSDTRFAVDAGGRRLKALKQLAEDGVIPADHPVPCLIEDERNAILTSTTENLQRAAMHPA 135
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
+ + + G ++++I G S V L++ ++ + E R +++L
Sbjct: 136 DQFEAFEAMIAEGRSEDEIALKFGVSVDLVRRRLKLARVAPEIIEQFRAGDLTLECVMAF 195
Query: 200 VSTSDPLSL 208
T D
Sbjct: 196 TLTDDHDRQ 204
>gi|291543143|emb|CBL16253.1| ParB-like partition proteins [Ruminococcus bromii L2-63]
Length = 273
Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
ISI +VP ++P ++L +SIK +G+++P+IVR+ G Y+II+G RR
Sbjct: 2 IKNISIDLLVPFENHPFKKRNGIEQQELTESIKENGLLEPIIVRSFPAGKYEIISGHRRV 61
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
A K ++ +PV I+ + ++ + N+ R+ + P E+A Y+ +
Sbjct: 62 EACKELGITSIPVTIKELTKDEAIVQMVDSNIHREHILPSEKAFAYKMKSEALKHQGKTY 121
Query: 159 GSIVGKSRSHVAN 171
G +V KSR ++++
Sbjct: 122 GQVVHKSRDNISD 134
>gi|53716051|ref|YP_106622.1| parB family protein [Burkholderia mallei ATCC 23344]
gi|53723368|ref|YP_112353.1| partitioning protein ParB [Burkholderia pseudomallei K96243]
gi|76818177|ref|YP_336661.1| parB family protein [Burkholderia pseudomallei 1710b]
gi|121597353|ref|YP_990743.1| parB family protein [Burkholderia mallei SAVP1]
gi|124381545|ref|YP_001025225.1| parB family protein [Burkholderia mallei NCTC 10229]
gi|126446592|ref|YP_001079581.1| parB family protein [Burkholderia mallei NCTC 10247]
gi|126458305|ref|YP_001077206.1| ParB family protein [Burkholderia pseudomallei 1106a]
gi|167740846|ref|ZP_02413620.1| ParB family protein [Burkholderia pseudomallei 14]
gi|167821617|ref|ZP_02453297.1| ParB family protein [Burkholderia pseudomallei 91]
gi|167826431|ref|ZP_02457902.1| ParB family protein [Burkholderia pseudomallei 9]
gi|167847943|ref|ZP_02473451.1| ParB family protein [Burkholderia pseudomallei B7210]
gi|167908361|ref|ZP_02495566.1| ParB family protein [Burkholderia pseudomallei NCTC 13177]
gi|167913184|ref|ZP_02500275.1| ParB family protein [Burkholderia pseudomallei 112]
gi|226193472|ref|ZP_03789077.1| ParB family protein [Burkholderia pseudomallei Pakistan 9]
gi|238563853|ref|ZP_00438170.2| ParB family protein [Burkholderia mallei GB8 horse 4]
gi|242314056|ref|ZP_04813073.1| ParB family protein [Burkholderia pseudomallei 1106b]
gi|254179085|ref|ZP_04885738.1| parB family protein [Burkholderia mallei ATCC 10399]
gi|254192181|ref|ZP_04898679.1| ParB family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254192664|ref|ZP_04899100.1| ParB family protein [Burkholderia pseudomallei S13]
gi|254204270|ref|ZP_04910628.1| ParB family protein [Burkholderia mallei FMH]
gi|254209439|ref|ZP_04915784.1| ParB family protein [Burkholderia mallei JHU]
gi|254262708|ref|ZP_04953573.1| ParB family protein [Burkholderia pseudomallei 1710a]
gi|254301904|ref|ZP_04969346.1| ParB family protein [Burkholderia pseudomallei 406e]
gi|254359594|ref|ZP_04975866.1| ParB family protein [Burkholderia mallei 2002721280]
gi|52213782|emb|CAH39837.1| putative partitioning protein ParB [Burkholderia pseudomallei
K96243]
gi|52422021|gb|AAU45591.1| parB family protein [Burkholderia mallei ATCC 23344]
gi|76582650|gb|ABA52124.1| parB family protein [Burkholderia pseudomallei 1710b]
gi|121225151|gb|ABM48682.1| parB family protein [Burkholderia mallei SAVP1]
gi|126232073|gb|ABN95486.1| ParB family protein [Burkholderia pseudomallei 1106a]
gi|126239446|gb|ABO02558.1| ParB family protein [Burkholderia mallei NCTC 10247]
gi|147744807|gb|EDK51889.1| ParB family protein [Burkholderia mallei FMH]
gi|147749959|gb|EDK57031.1| ParB family protein [Burkholderia mallei JHU]
gi|148028781|gb|EDK86741.1| ParB family protein [Burkholderia mallei 2002721280]
gi|157825074|gb|EDO88966.1| ParB family protein [Burkholderia pseudomallei 406e]
gi|157987661|gb|EDO95428.1| ParB family protein [Burkholderia pseudomallei Pasteur 52237]
gi|160694603|gb|EDP84612.1| parB family protein [Burkholderia mallei ATCC 10399]
gi|169649419|gb|EDS82112.1| ParB family protein [Burkholderia pseudomallei S13]
gi|225934354|gb|EEH30336.1| ParB family protein [Burkholderia pseudomallei Pakistan 9]
gi|238519833|gb|EEP83299.1| ParB family protein [Burkholderia mallei GB8 horse 4]
gi|242137295|gb|EES23698.1| ParB family protein [Burkholderia pseudomallei 1106b]
gi|254213710|gb|EET03095.1| ParB family protein [Burkholderia pseudomallei 1710a]
gi|261826374|gb|ABM99273.2| ParB family protein [Burkholderia mallei NCTC 10229]
Length = 355
Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 4/232 (1%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + S P + + +I P+P NPR+++ + +L ++ G Q
Sbjct: 68 ADESSQYRSWRIDNRYQPGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQA 127
Query: 79 LIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDL 135
+ V + Y + G RR RA K A+ V I+ ++ S ++ NVQR
Sbjct: 128 IHVIPDYDNPGSYFVSDGGRRVRALKEANKESVKAIVVDLPIGIQSYKLGYDLNVQRDSQ 187
Query: 136 NPLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
+ A+ +++ +Y +Q ++ +G S VA L I KLP +V + + G
Sbjct: 188 TVFDNAIVWKRFLEEKYFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMVARPDRFG 247
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ + ++ +++L Q K + + S +
Sbjct: 248 SNMAYQVGRYHAARGTDSTLRLINKILSDDLSTRQVADIVKGRATTQESPKP 299
>gi|116686572|ref|YP_839819.1| parB-like partition proteins [Burkholderia cenocepacia HI2424]
gi|116652287|gb|ABK12926.1| ParB family protein [Burkholderia cenocepacia HI2424]
Length = 343
Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 87/220 (39%), Gaps = 34/220 (15%)
Query: 1 MSNNYSK-----------RRLGRGLA----AL---IGEVNQSIDSPEKKTETIP------ 36
M+ + SK L RGLA AL + E + +
Sbjct: 1 MAKDTSKDKKPTGNLHLAAGLLRGLAQENAALETRLPEPAAAPAAVVDTAPASGPAGTAP 60
Query: 37 ------ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ + + +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 AGTPELGAPQKVLVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGK 120
Query: 91 --IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+I G+RR R + + + + IA N + ++A+ +++L
Sbjct: 121 LVVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAIAWKRL 180
Query: 148 ISEYGY-TQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+ E + QN + +GK ++ ++ L + LP+++ E +
Sbjct: 181 LDEKVFSDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 220
>gi|107028570|ref|YP_625665.1| parB-like partition proteins [Burkholderia cenocepacia AU 1054]
gi|105897734|gb|ABF80692.1| ParB family protein [Burkholderia cenocepacia AU 1054]
Length = 343
Score = 46.6 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 87/220 (39%), Gaps = 34/220 (15%)
Query: 1 MSNNYSK-----------RRLGRGLA----AL---IGEVNQSIDSPEKKTETIP------ 36
M+ + SK L RGLA AL + E + +
Sbjct: 1 MAKDTSKDKKPTGNLHLAAGLLRGLAQENAALETRLPEPAAAPAAVVDTAPASGPAGTAP 60
Query: 37 ------ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ + + +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 AGTPELGAPQKVLVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGK 120
Query: 91 --IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+I G+RR R + + + + IA N + ++A+ +++L
Sbjct: 121 LVVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAIAWKRL 180
Query: 148 ISEYGY-TQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+ E + QN + +GK ++ ++ L + LP+++ E +
Sbjct: 181 LDEKVFSDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 220
>gi|309783305|ref|ZP_07678016.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|308917937|gb|EFP63623.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
Length = 430
Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 58/271 (21%), Positives = 105/271 (38%), Gaps = 29/271 (10%)
Query: 6 SKRRLGRG-LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K L G L+A + + + + I + I + R F LE
Sbjct: 8 KKPGLNLGKLSA----------VAQIAVKPVQPADAEIELARIY-SVKQVRKTF--RNLE 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLE 123
+L +S K +GII+PL+V +G Y+II GERR+RAA +A L +VPVII+
Sbjct: 55 ELAESFKLNGIIEPLVVHEEADGRYRIIVGERRYRAAPLAGLVKVPVIIKKGLTELQIRR 114
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ + EN R DL EEA+G + + Y + +I + + V+ + + + VR
Sbjct: 115 LQVTENNDRDDLTAYEEAMGVIEDVE--LYGTKEAMTIWNRGEAWVSKRMAVRRYADPVR 172
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
E++ + I + + + L + + +
Sbjct: 173 ELLENDLCGDFEVL---------HCLNQIYDIEDTHTEFSRLSHRMNEGLPLSRDEARNT 223
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKG 274
+ K + ++ + I + + G
Sbjct: 224 LARMKAWKQQQDDLAQR---RIELDNAKKAG 251
>gi|189912874|ref|YP_001964763.1| ParB-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|189913199|ref|YP_001964428.1| Putative chromosome partitioning protein ParB [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|167777550|gb|ABZ95850.1| ParB-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167781267|gb|ABZ99564.1| Putative chromosome partitioning protein ParB [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 236
Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 33 ETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKII 92
++ + ++ I PNP PR E DL S++ G+I+P++VR D G Y I+
Sbjct: 17 SEKKKNPSHLELNQIFPNPTQPR-LIGREDTSDLVPSMERLGLIEPILVRK-DKGKYLIV 74
Query: 93 AGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
AGERR+RAA E+P II + + E+++ EN +RK+LNP E + L E
Sbjct: 75 AGERRYRAALKLGWKEIPAIITDANEDVCYEMSLAENEKRKNLNPWEVGKAIQYLRKEKK 134
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
T +++ ++G S +V + I +L +
Sbjct: 135 KTADEVSVLLGYSERYVKQLSSIARLDQKSVMEL 168
>gi|330827383|ref|YP_004390621.1| parB-like partition protein [Alicycliphilus denitrificans K601]
gi|329312691|gb|AEB87105.1| parB-like partition protein [Alicycliphilus denitrificans K601]
Length = 430
Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 58/271 (21%), Positives = 105/271 (38%), Gaps = 29/271 (10%)
Query: 6 SKRRLGRG-LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K L G L+A + + + + I + I + R F LE
Sbjct: 8 KKPGLNLGKLSA----------VAQIAVKPVQPADAEIELARIY-SVKQVRKTF--RNLE 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLE 123
+L +S K +GII+PL+V +G Y+II GERR+RAA +A L +VPVII+
Sbjct: 55 ELAESFKLNGIIEPLVVHEEADGRYRIIVGERRYRAAPLAGLVKVPVIIKKGLTELQIRR 114
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ + EN R DL EEA+G + + Y + +I + + V+ + + + VR
Sbjct: 115 LQVTENNDRDDLTAYEEAMGVIEDVE--LYGTKEAMTIWNRGEAWVSKRMAVRRYADPVR 172
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
E++ + I + + + L + + +
Sbjct: 173 ELLENDLCGDFEVL---------HCLNQIYDIEDTHTEFSRLSHRMNEGLPLSRDEARNT 223
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKG 274
+ K + ++ + I + + G
Sbjct: 224 LARMKAWKQQQDDLAQR---RIELDNAKKAG 251
>gi|254426379|ref|ZP_05040095.1| ParB-like nuclease domain family [Synechococcus sp. PCC 7335]
gi|196187793|gb|EDX82759.1| ParB-like nuclease domain family [Synechococcus sp. PCC 7335]
Length = 369
Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ ISI I PNP PR + L ++ + G I +I+ +
Sbjct: 55 EAQSGEQDISISLIDPNPSQPRQTIPLSSVRTLANTLDADGQITSIILIPSGERYL-LWD 113
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+RR+ AAK + +I + N + +
Sbjct: 114 GQRRWAAAKYLEWETIRAVIAPMPNDLHRQSLLTFVHH 151
>gi|206479928|ref|YP_002235439.1| putative partitioning protein [Burkholderia cenocepacia J2315]
gi|195945084|emb|CAR57709.1| putative partitioning protein [Burkholderia cenocepacia J2315]
Length = 290
Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 50/263 (19%), Positives = 97/263 (36%), Gaps = 9/263 (3%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ S + T+ + I I N NPR + + + ++ +S+ + G Q
Sbjct: 15 EVGSSQGATKYEIGQTYEVPIGKIKSNSVNPRAIYTASAVSEMAESLTARGQGQSASAYV 74
Query: 84 IDNGLYKIIAGERRFRAAKMASLS--EVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
+ G +I GERR R A+ A L V + + + E A NV+RKD +PL++A
Sbjct: 75 DEAGDIVLIDGERRLRGARAAGLPTLRVEIRPKPASERELYEEARAANVERKDQSPLDDA 134
Query: 142 LGYEQLISEYGYTQN-DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
L +++L+S Y + + HV+ L + +LPS + + + L
Sbjct: 135 LKWKELLSRKIYPTQVALAKALNLGEDHVSRTLSLAQLPSRIVQAAAEYPELLSLKMLNA 194
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
+ + + + + K R + +++S +
Sbjct: 195 IREFWEVKGEEETLELVLDAAKTGIGYRDVAARRKAAAKGTVKRPRSTR-----EQLSFR 249
Query: 261 VGLNISIKHRNNKGQFCIKYETN 283
G K G+ +K +
Sbjct: 250 -GAKGEFKSFEEDGRIELKLKGL 271
>gi|257413833|ref|ZP_04744362.2| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|257202178|gb|EEV00463.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
Length = 287
Score = 46.6 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + E I+I + ++P ++DL SIK +GII P+IVR
Sbjct: 4 AEKVDQMNPDEKIVEIAIERLRVFENHPFRVEMDSQMKDLQDSIKKYGIITPVIVRPRKE 63
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G Y+II+G RR AA+ +VP IIR + + ++ + N+QR+ + P E+A Y+
Sbjct: 64 GYYEIISGHRRIFAAEKLGYRKVPTIIRYMTDDQAVIAMVDSNLQRERIQPSEKAFAYKM 123
Query: 147 LIS 149
Sbjct: 124 KYD 126
>gi|291333882|gb|ADD93563.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S04-C293]
Length = 151
Score = 46.2 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+EN+QR+DLNP+EEA G +L E+ +Q D+ S VGKSRS VANILR+ L + ++
Sbjct: 4 IENLQREDLNPMEEARGLLRLQKEFNISQQDVASAVGKSRSGVANILRLNNLCKEAQNLL 63
Query: 187 RKEEISLGHARTLV--STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
I +GHAR L+ S A+ SVR TE+ Q+ + + + +
Sbjct: 64 ESSSIDMGHARALLTLPEGPQASFAKQAAKNGWSVRQTEKAAQDYLSDSD----KTKTPK 119
Query: 245 EKEKYLTDLEKKISSKVGLNISIKHRN 271
K+ ++ LE++IS+++ L++SI+H+
Sbjct: 120 RKDANISALEEEISNELSLSVSIQHKK 146
>gi|121582527|ref|YP_974059.1| parB-like partition proteins [Acidovorax sp. JS42]
gi|120608585|gb|ABM44324.1| parB-like partition proteins [Acidovorax sp. JS42]
Length = 430
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 59/271 (21%), Positives = 108/271 (39%), Gaps = 29/271 (10%)
Query: 6 SKRRLGRG-LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
K L G L+A + + + I + I + R F LE
Sbjct: 8 KKPGLNLGKLSA----------VAQIAVKPAQPADAEIELSRIF-SVKQVRKTF--RNLE 54
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLE 123
+L +S K +GII+PL+V +G Y+II GERRFRAA +A L++VPVII+
Sbjct: 55 ELAESFKLNGIIEPLVVHEEADGRYRIIVGERRFRAAPLAGLAKVPVIIKKGLTELQIRR 114
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ + EN R DL EEA+G + + + Y + +I + + V+ + + + VR
Sbjct: 115 LQVTENNDRDDLTAYEEAMGVIEDVEQ--YGTKEAMTIWNRGEAWVSKRMAVRRYADPVR 172
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
E++ + I + + + L + + +
Sbjct: 173 ELLENDLCGDFEVL---------HCLNQIYDIEETRTEFYRLRHRMNEGLPLSRDEARNT 223
Query: 244 REKEKYLTDLEKKISSKVGLNISIKHRNNKG 274
+ K + +++ + I +++ G
Sbjct: 224 LARMKSWKQQQDELAQR---RIELENAKKTG 251
>gi|75812395|ref|YP_320014.1| ParB family protein [Anabaena variabilis ATCC 29413]
gi|75705151|gb|ABA24825.1| ParB family protein [Anabaena variabilis ATCC 29413]
Length = 376
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ I + I PNPH PR E ++ + +K HG I P+I+ A ++G Y ++
Sbjct: 55 KSSAGEVEIELELIDPNPHQPRQTITLESIQAKARLLKKHGQITPIILVAQEDGRYILLD 114
Query: 94 GERRFRAAKMASLSEVPVIIRNV 116
G+ R AK+ + ++ +
Sbjct: 115 GQLRTEGAKLLGWKSIRAVVVPM 137
>gi|302878195|ref|YP_003846759.1| parB-like partition protein [Gallionella capsiferriformans ES-2]
gi|302580984|gb|ADL54995.1| parB-like partition protein [Gallionella capsiferriformans ES-2]
Length = 562
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 101/186 (54%), Gaps = 4/186 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
++ + + +I NPR YF+ + ++ S+ + G+IQP+++R ++ ++I+AGE
Sbjct: 3 QQNISHMRVSNIRQGR-NPRAYFDPVEMAEMEASVSAKGVIQPILIRPVE-DWFEIVAGE 60
Query: 96 RRFRAAKMAS--LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
RR+RAAK E+PV+++N+ ++ + E+A++EN+QR +++P EEA +++
Sbjct: 61 RRWRAAKNVHGDNYEIPVLVKNITSEEADELALIENIQRANMSPTEEAAAAARILGRCEG 120
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
+++ + +G +R + L ++ SV + + +I LGHA L +T +
Sbjct: 121 NRDEAANRLGWTRKTLDKRLALMNCSLSVMTALNERKIQLGHAELLAATPKDRQEKVIAN 180
Query: 214 SKKMSV 219
Sbjct: 181 LLSRPS 186
>gi|238025583|ref|YP_002909815.1| ParB-like partition protein [Burkholderia glumae BGR1]
gi|237880248|gb|ACR32579.1| ParB-like partition protein [Burkholderia glumae BGR1]
Length = 321
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 9/263 (3%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ S ++ + + I N NPR + + + ++ +S+ + G Q
Sbjct: 46 EVGSSQETARYEIGQTYEVPVGKIKSNSVNPRAIYTASSVSEMAESLAARGQGQSASAYQ 105
Query: 84 IDNGLYKIIAGERRFRAAKMASLS--EVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
+ G +I GERR R A+ A L + + R + E A NV+RKD +PL++A
Sbjct: 106 DEAGDLVLIDGERRLRGARTAGLPTLRLEIRPRPASERELYEEARAANVERKDQSPLDDA 165
Query: 142 LGYEQLISEYGYTQN-DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
+ +++LIS Y + + HV+ L + +LPS + + + L
Sbjct: 166 IKWKELISRKIYPTQAALAKALKLGEDHVSRTLSLAQLPSKIVQAAAEYPELLSLKMLNA 225
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
+ +S + + + K R + ++++ +
Sbjct: 226 IREFWEVKGEEETLDLISEAAKSGMGYRDVSARRKAAAKGTIRRPRSTR-----EQLTFR 280
Query: 261 VGLNISIKHRNNKGQFCIKYETN 283
G K G+ +K +
Sbjct: 281 -GAKGEFKSFEEDGRIELKLKGL 302
>gi|56808867|ref|ZP_00366578.1| COG1475: Predicted transcriptional regulators [Streptococcus
pyogenes M49 591]
Length = 57
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 19/47 (40%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
E + I IV NP+ PR F L+DL SI L+
Sbjct: 2 TKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSINQTASFNLLLF 48
>gi|255305101|ref|ZP_05349273.1| ParB-like partition protein [Clostridium difficile ATCC 43255]
Length = 457
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + P+ E I ++ + ++P + E + + S+K G+ QP I
Sbjct: 154 APKGPEKPKDAPRRGKEQIVYIKLNELHAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAI 213
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSLEIAIVENVQRKDLNPLE 139
VR ++G Y+I++G RR +A+++A +++P I+RN D+++ ++ QR+++ P E
Sbjct: 214 VRPREDGGYEIVSGHRRQKASELAGYADMPCIVRNLTDDEAITQMVEDNLNQREEILPSE 273
Query: 140 EALGYEQLISEYGYTQNDIGSIVG 163
A + + + + +
Sbjct: 274 RAKALKMQLEAIKHQGSRTSGQID 297
>gi|291529895|emb|CBK95480.1| ParB-like partition proteins [Eubacterium siraeum 70/3]
Length = 282
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E+ + + + S+VP ++P E E L QSIK+ G I+PLIVR I G Y++I+
Sbjct: 2 KEKETIEYLDLKSLVPFRNHPFKLRGGEEKEQLLQSIKTQGAIEPLIVRPISEGEYEVIS 61
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
G RR K + ++PVI+RN+ ++ ++ + + N+ R+++ P E A Y+
Sbjct: 62 GHRRMEICKELGMEKIPVIVRNLTDEQAVSMMVDANLHRENILPSERAFAYKIKWEAAKK 121
Query: 154 TQNDIGSIVGKSRSH 168
++ + + R+
Sbjct: 122 SEKTLSQPATRMRND 136
>gi|153820642|ref|ZP_01973309.1| hypothetical protein A5C_2859 [Vibrio cholerae NCTC 8457]
gi|126508814|gb|EAZ71408.1| hypothetical protein A5C_2859 [Vibrio cholerae NCTC 8457]
Length = 115
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
E+ A ++ + +AQ + K+++VR TE+LV++ + ++
Sbjct: 14 EMGHARALLMLEGEQQVEIAQQVAKKQLTVRQTEQLVKK-----CLSDPSDAKNVSEDLE 68
Query: 250 LTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L + +S K+ +SI + N K + I + +L+++ + L
Sbjct: 69 IQQLSQNLSEKLAAKVSIVRTPNGKSKVTISLDEPHKLELLIAKLQN 115
>gi|254250334|ref|ZP_04943653.1| ParB-like partition protein [Burkholderia cenocepacia PC184]
gi|124879468|gb|EAY66824.1| ParB-like partition protein [Burkholderia cenocepacia PC184]
Length = 343
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 86/220 (39%), Gaps = 34/220 (15%)
Query: 1 MSNNYSK-----------RRLGRGLA----AL---IGEVN------------QSIDSPEK 30
M+ + SK L RGLA AL + E +
Sbjct: 1 MAKDTSKDKKPTGNLHLAAGLLRGLAQENAALETRLPEPAAAPAAVVDAAPASGPAATAP 60
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ + + +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 AGTPELGAPQKVLVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGK 120
Query: 91 --IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+I G+RR R + + + + IA N + ++A+ +++L
Sbjct: 121 LVVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAIAWKRL 180
Query: 148 ISEYGY-TQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+ E + QN + +GK ++ ++ L + LP+++ E +
Sbjct: 181 LDEKVFSDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 220
>gi|222102402|ref|YP_002546543.1| transcriptional regulator [Agrobacterium vitis S4]
gi|221739646|gb|ACM40348.1| transcriptional regulator [Agrobacterium vitis S4]
Length = 645
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
I + + +P N R +++EG+E L SI ++G++Q ++VR G Y + AG R
Sbjct: 2 TKIVSIPLSKLDTDPKNVRKTYKAEGVESLAASILANGVVQNIVVRKAPKGRYFVTAGGR 61
Query: 97 RFRAA-----KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
R A + ++ V + E+++ ENVQR++++P ++ + ++ +++E
Sbjct: 62 RRAALLLLIERGQISADYAVNAIVKTADEATELSLTENVQREEMHPADQYVAFQAMVNE- 120
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
G DI + G + V L + K+ + ++ R +E++ D
Sbjct: 121 GKAIADIAARFGVTEIIVRRRLALAKVSPVLLDLFRNDEMTFEQLTAFTVCDDHERQ 177
>gi|17233099|ref|NP_490189.1| ParB family chromosome partitioning protein [Nostoc sp. PCC 7120]
gi|17135621|dbj|BAB78167.1| chromosome partitioning protein, ParB family [Nostoc sp. PCC 7120]
Length = 372
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ I + I PNPH PR E ++ + +K HG I P+I+ A ++G Y ++
Sbjct: 55 KNSSGEVEIELELIDPNPHQPRQTITLESIQAKARLLKKHGQITPIILVAQEDGRYILLD 114
Query: 94 GERRFRAAKMASLSEVPVIIRNV 116
G+ R AK+ + ++ +
Sbjct: 115 GQLRTEGAKLLGWKSIRAVVVPM 137
>gi|160893196|ref|ZP_02073984.1| hypothetical protein CLOL250_00742 [Clostridium sp. L2-50]
gi|160945819|ref|ZP_02093045.1| hypothetical protein FAEPRAM212_03352 [Faecalibacterium prausnitzii
M21/2]
gi|156865279|gb|EDO58710.1| hypothetical protein CLOL250_00742 [Clostridium sp. L2-50]
gi|158443550|gb|EDP20555.1| hypothetical protein FAEPRAM212_03352 [Faecalibacterium prausnitzii
M21/2]
Length = 459
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + P+ E I ++ + ++P + E + + S+K G+ QP I
Sbjct: 156 APKGPEKPKDAPRRGKEQIIYIKLNELHAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAI 215
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSLEIAIVENVQRKDLNPLE 139
VR ++G Y+I++G RR +A+++A +++P I+RN D+++ ++ QR+++ P E
Sbjct: 216 VRPREDGGYEIVSGHRRQKASELAGYADMPCIVRNLTDDEAITQMVEDNLNQREEILPSE 275
Query: 140 EALGYEQLISEYGYTQNDIGSIVG 163
A + + + + +
Sbjct: 276 RAKALKMQLEAIKHQGSRTSGQID 299
>gi|170735166|ref|YP_001774280.1| parB-like partition protein [Burkholderia cenocepacia MC0-3]
gi|169821204|gb|ACA95785.1| parB-like partition protein [Burkholderia cenocepacia MC0-3]
Length = 343
Score = 46.2 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 86/220 (39%), Gaps = 34/220 (15%)
Query: 1 MSNNYSK-----------RRLGRGLA----AL---IGEVN------------QSIDSPEK 30
M+ + SK L RGLA AL + E +
Sbjct: 1 MAKDTSKDKKPTGNLHLAAGLLRGLAQENAALETRLPEPAAAPAAVVDAVPASGPAATAP 60
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ + + +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 PGTPELGAPQKVLVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGK 120
Query: 91 --IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+I G+RR R + + + + IA N + ++A+ +++L
Sbjct: 121 LVVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAIAWKRL 180
Query: 148 ISEYGY-TQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+ E + QN + +GK ++ ++ L + LP+++ E +
Sbjct: 181 LDEKVFSDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 220
>gi|134287551|ref|YP_001109717.1| parB-like partition protein [Burkholderia vietnamiensis G4]
gi|134132201|gb|ABO59936.1| parB-like partition protein [Burkholderia vietnamiensis G4]
Length = 356
Score = 46.2 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 51/288 (17%), Positives = 109/288 (37%), Gaps = 22/288 (7%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
+ + + +SI + NP+NPR ++ + ++ L ++ +QP
Sbjct: 51 SDEKPTPIVDAPIERPGDQRIHILSIADCIGNPYNPRAFYSPQSIDALAATLDREEQLQP 110
Query: 79 LIVRAIDNGL--YKIIAGERRFRAAKMASLSEV-PVIIRNVDNKSSLEIAIVENVQRKDL 135
+I + I+ GERR RA K + V V N+ KS +A N +R D
Sbjct: 111 IIFTELPEFPGKKIIVDGERRKRALKSLGRTTVLGVYRGNLSPKSLFMLAYRANKERDDQ 170
Query: 136 NPLEEALGYEQLISEYGYTQN-DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
++A+ +++L++E+ Y ++ + VG+ + V +L + LP + + + +
Sbjct: 171 TVFDDAVSWQRLLNEHVYRDQLELAAAVGEDKGVVNKVLLLNTLPMPLLQRMVDNADKVK 230
Query: 195 HARTLVSTSDPL--------SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ +++ + SVR E++ + K+ SR K
Sbjct: 231 LSHAYNIKLICDKAGEAVAEHWLDQVIAGQASVRKLEQVATSEKTAARGAKRTHYESRVK 290
Query: 247 EKYLTDLE-KKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
+ E ++ + + + KG E + + L
Sbjct: 291 FASPSGFELGELKAFADGRAELNLKGIKG---------EAQERLIDKL 329
>gi|290769825|gb|ADD61598.1| putative protein [uncultured organism]
Length = 459
Score = 45.8 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + P+ E I ++ + ++P + E + + S+K G+ QP I
Sbjct: 156 TPKEPEKPKDAPRRGKEQIVYIKLNELYAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAI 215
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSLEIAIVENVQRKDLNPLE 139
VR ++G Y+I++G RR +A+++A +++P I+RN D+++ ++ QR+++ P E
Sbjct: 216 VRPREDGGYEIVSGHRRQKASELAGYADMPCIVRNLTDDEAITQMVEDNLNQREEILPSE 275
Query: 140 EALGYEQLISEYGYTQNDIGSIVG 163
A + + + + +
Sbjct: 276 RAKALKMQLEAIKHQGSRTSGQID 299
>gi|78060857|ref|YP_370765.1| ParB family protein [Burkholderia sp. 383]
gi|77968742|gb|ABB10121.1| ParB-like partition protein [Burkholderia sp. 383]
Length = 353
Score = 45.8 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 108/281 (38%), Gaps = 8/281 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + P +S+ +I +P NPR+++ + +L ++ G Q +
Sbjct: 67 DESAQYRAWRLENRYAPGQVIELSLKAIKHSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 126
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G Y + G RR RA K A+ V I+ +V S ++ NVQR
Sbjct: 127 HVIPDYENPGTYFVSDGGRRVRALKEANKESVKAIVIDVPIGIQSYKLGYDLNVQRDSQT 186
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + ++ +Q ++ +G S VA L I KLP ++ + + G
Sbjct: 187 VFDNAVVWRRFLDDKHFQSQKELSEHLGLDESTVAVALSIGKLPEAIMQEMVARPDRFGS 246
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ + ++ +++L Q + K + + + K +
Sbjct: 247 NMAYQVGRYHNARGTEATLRLINKIVSDDLSTRQVSDIVKGRVAAQETP-KAAGRQRYAQ 305
Query: 256 KISSKVGLNISIKHRN-NKGQFCIKYETN--EQLKIICSLL 293
++ K+G ++ + + ++ ++ I L
Sbjct: 306 RLEIKLGGKSVGDLKSYGEDRIELRLRGLPKDKRDAILEQL 346
>gi|296158624|ref|ZP_06841454.1| parB-like partition protein [Burkholderia sp. Ch1-1]
gi|295891192|gb|EFG70980.1| parB-like partition protein [Burkholderia sp. Ch1-1]
Length = 352
Score = 45.8 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 10/268 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIA 93
P +++ +I P+P NPR+++ + +L ++ G Q + V + Y +
Sbjct: 84 PGQVIELALKTIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQAIHVIPDYDNPGSYFVSD 143
Query: 94 GERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLNPLEEALGYEQL-ISEY 151
G RR RA K A+ V I+ ++ S ++ NVQR + A+ + + +
Sbjct: 144 GGRRVRALKEANKESVKAIVIDLPIGIQSYKLGYDLNVQRDSQTVFDNAVVWRRFLDDRH 203
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
+Q ++ +G S VA L I KLP V + G +
Sbjct: 204 FQSQKELAEHLGLDESTVAVALSISKLPEVVMHEMVARPDRFGSNMAYQVGRYHTARGAD 263
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN 271
+ ++ +++L Q K + + S K +++ K+ +S+
Sbjct: 264 ATLRLINKILSDDLSTRQVADIVKGRASGQES-AKPAGRQRYAQRLEIKLD-GVSVGDLK 321
Query: 272 NKG--QFCIKYETN--EQLKIICSLLGE 295
+ G + ++ + E+ I + +
Sbjct: 322 SYGDDRIELRLKGLTREKRDDILRQIEK 349
>gi|207722746|ref|YP_002253181.1| partitioning protein [Ralstonia solanacearum MolK2]
gi|206587928|emb|CAQ18509.1| partitioning protein [Ralstonia solanacearum MolK2]
Length = 357
Score = 45.8 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 76/189 (40%), Gaps = 6/189 (3%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII 76
L + P+ + + I+I V NP+NPR ++ +++L +++ G I
Sbjct: 62 LAASTTSNTSQPDGNSAAPAVGRKSIAIADCVSNPYNPRIFYPEAKIQELALTLQREGQI 121
Query: 77 QPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRN---VDNKSSLEIAIVENVQ 131
+ + + Y II GERR RA + + + R+ + + + +
Sbjct: 122 EAIKFTRLPQFPGKYVIIDGERRLRAKRSLGETHIDAEERHDVQPIDLYTTAYRANNDHE 181
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R+ + A + + QN + V K +++V+ +L + LP ++ E + +
Sbjct: 182 RQSIFDDAIAW-QALIEKQVVADQNSLAEKVTKDKTYVSKVLSLNSLPRAMLERMAESAE 240
Query: 192 SLGHARTLV 200
+G
Sbjct: 241 RVGLQAAYC 249
>gi|331083501|ref|ZP_08332613.1| hypothetical protein HMPREF0992_01537 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404194|gb|EGG83742.1| hypothetical protein HMPREF0992_01537 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 291
Score = 45.8 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 47/261 (18%), Positives = 104/261 (39%), Gaps = 6/261 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ E + E I I + ++P + + L +SI+ +GI+ PLIVR + +
Sbjct: 5 TKEFIQKNEDEKIMEIEIERLRSFKNHPFQVRDDNEMHLLKESIEKYGILTPLIVRPVPD 64
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G+Y+IIAG RR AA++ +VPVIIR ++ ++ + N+ R+ ++ E+A Y+
Sbjct: 65 GVYEIIAGHRRRHAAELLGYRKVPVIIRVMNEDEAILNMVDSNLHREKISFSEKAFAYKM 124
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPL 206
+ + I + + +++ + D
Sbjct: 125 KNDVLKRKSGRKKGQIDHKTKKKRTVEIISEECGDSPKQVQRYISLTKLIPEFLQKLDDE 184
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS 266
++ + ++++ E+ + + ++ +K + + + +
Sbjct: 185 LISFNPAVEISALKEEEQKQLLEAMDYAQAVPSLSQAQRIKKLSKENQLTLEKMQEIMSE 244
Query: 267 IKHRNNKGQFC-IKYETNEQL 286
IK KG+ + + EQL
Sbjct: 245 IK----KGEITRVAFTN-EQL 260
>gi|225377329|ref|ZP_03754550.1| hypothetical protein ROSEINA2194_02976 [Roseburia inulinivorans DSM
16841]
gi|225210860|gb|EEG93214.1| hypothetical protein ROSEINA2194_02976 [Roseburia inulinivorans DSM
16841]
Length = 462
Score = 45.8 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + P+ E I ++ + ++P + E + + S+K G+ QP I
Sbjct: 159 TPKEPEKPKDAPRRGKEQIVYIKLNELYAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAI 218
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSLEIAIVENVQRKDLNPLE 139
VR ++G Y+I++G RR +A+++A +++P I+RN D+++ ++ QR+++ P E
Sbjct: 219 VRPREDGGYEIVSGHRRQKASELAGYADMPCIVRNLTDDEAITQMVEDNLNQREEILPSE 278
Query: 140 EALGYEQLISEYGYTQNDIGSIVG 163
A + + + + +
Sbjct: 279 RAKALKMQLEAIKHQGSRTSGQID 302
>gi|153829672|ref|ZP_01982339.1| ParB family protein [Vibrio cholerae 623-39]
gi|148874848|gb|EDL72983.1| ParB family protein [Vibrio cholerae 623-39]
Length = 116
Score = 45.8 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
E+ A ++ + +AQ + K+++VR TE+LV++ + ++
Sbjct: 15 EMGHARALLMLEGEQQVEIAQQVAKKQLTVRQTEQLVKK-----CLSDPSDAKNVSEDLE 69
Query: 250 LTDLEKKISSKVGLNISI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L + +S K+ +SI + N K + I + +L+++ + L
Sbjct: 70 IQQLSQNLSEKLAAKVSIVRTPNGKSKVTISLDEPHKLELLIAKLQN 116
>gi|311064280|ref|YP_003971005.1| chromosome partitioning protein ParB [Bifidobacterium bifidum
PRL2010]
gi|310866599|gb|ADP35968.1| ParB Chromosome partitioning protein [Bifidobacterium bifidum
PRL2010]
Length = 465
Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 9/158 (5%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA------IDNGLYKI 91
+ + + + + NP+NPR +++L SI+S GI QPL+V + Y++
Sbjct: 4 TIENLQVDDLHANPNNPRKQV--GDVDELASSIRSQGIKQPLLVTPTGETDIDGHKQYRV 61
Query: 92 IAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
+ G RR AA+ A LS VP I+ +D + EI +VEN QR DL P+EEA GY+ L+
Sbjct: 62 VIGHRRLAAARQAGLSTVPAIVEEMDARREREIMLVENTQRSDLTPIEEADGYQGLLDLG 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKE 189
+ ++ G+S V L+I ++P R+M
Sbjct: 122 VHV-KEMAEKTGRSDRFVRRRLKIARIPQETRDMSADF 158
>gi|171316719|ref|ZP_02905932.1| parB-like partition protein [Burkholderia ambifaria MEX-5]
gi|171098170|gb|EDT42981.1| parB-like partition protein [Burkholderia ambifaria MEX-5]
Length = 559
Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 55/194 (28%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
Q I + I NPR YF+ + ++ SI + G+ P+IVR +D+G +++IAG RR
Sbjct: 7 QQPTIKLGRIKLGR-NPRTYFDDAKMAEMKASISARGVDTPVIVRPLDDGFFELIAGGRR 65
Query: 98 FRAA--KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
++AA ++PV +++VD + EIA EN+QR D++P +EA+ +L+ +
Sbjct: 66 YKAALETRGEDYDMPVNVKDVDAVEAEEIAFTENIQRDDMSPGDEAVEAARLLGRCQGDR 125
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI--SLGHARTLVSTSDPLSLAQVIV 213
+ +G S + + L +L + V + +I +S + + VI+
Sbjct: 126 EEAARRIGWSLPTLNSRLALLNCSNEVLIALNTRQILLGHAELLAALSKENQDRVLPVII 185
Query: 214 SKKMSVRDTEELVQ 227
++K SV D +LV+
Sbjct: 186 AEKKSVTDVRKLVE 199
>gi|187928593|ref|YP_001899080.1| parB-like partition protein [Ralstonia pickettii 12J]
gi|241114171|ref|YP_002973646.1| parB-like partition protein [Ralstonia pickettii 12D]
gi|187725483|gb|ACD26648.1| parB-like partition protein [Ralstonia pickettii 12J]
gi|240868744|gb|ACS66402.1| parB-like partition protein [Ralstonia pickettii 12D]
Length = 358
Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 77/186 (41%), Gaps = 6/186 (3%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+++ T + + I+I V NP+NPR ++ +++L +++ G I+ +
Sbjct: 66 TTANTVEPAAGPTASAVGGRKSIAIADCVSNPYNPRVFYPEAKIQELALTLQREGQIEAI 125
Query: 80 IVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRN---VDNKSSLEIAIVENVQRKD 134
+ Y II GERR RA + + + R+ + + + +R+
Sbjct: 126 KFTRLPQFPGKYVIIDGERRLRAKRSLGETHIDAEERHDVLPIDLYTTAYRANNDHERQS 185
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
+ A + + + QN + V K +++V+ +L + LP ++ E + + +G
Sbjct: 186 IFDDAIAW-QQLIEQQVVADQNSLAEKVTKDKAYVSKVLSLNALPRAILERMAESADRVG 244
Query: 195 HARTLV 200
Sbjct: 245 LQAAYC 250
>gi|238923219|ref|YP_002936734.1| ParB-like partition protein [Eubacterium rectale ATCC 33656]
gi|238925030|ref|YP_002938546.1| ParB-like partition protein [Eubacterium rectale ATCC 33656]
gi|238874893|gb|ACR74600.1| ParB-like partition protein [Eubacterium rectale ATCC 33656]
gi|238876705|gb|ACR76412.1| ParB-like partition protein [Eubacterium rectale ATCC 33656]
Length = 459
Score = 45.8 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ + P+ E I ++ + ++P + E + + S+K G+ QP I
Sbjct: 156 TPKEPEKPKDAPRRGKEQIVYIKLNELYAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAI 215
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSLEIAIVENVQRKDLNPLE 139
VR ++G Y+I++G RR +A+++A +++P I+RN D+++ ++ QR+++ P E
Sbjct: 216 VRPREDGGYEIVSGHRRQKASELAGYADMPCIVRNLTDDEAITQMVEDNLNQREEILPSE 275
Query: 140 EALGYEQLISEYGYTQNDIGSIVG 163
A + + + + +
Sbjct: 276 RAKALKMQLEAIKHQGSRTSGQID 299
>gi|167841002|ref|ZP_02467686.1| parB family protein [Burkholderia thailandensis MSMB43]
Length = 355
Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 4/190 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + + + + +I P+P NPR+++ + +L ++ G Q +
Sbjct: 69 DESNQYRAWRIENRYQSGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQAI 128
Query: 80 IVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
V + Y + G RR RA K A+ V I+ ++ S ++ NVQR
Sbjct: 129 HVIPDYDNPGSYFVSDGGRRVRALKEANKESVKAIVIDLPIGIQSYKLGYDLNVQRDSQT 188
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ +++ +Y +Q ++ +G S VA L I KLP +V + + G
Sbjct: 189 VFDNAIVWKRFLEEKYFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMVARPDRFGS 248
Query: 196 ARTLVSTSDP 205
Sbjct: 249 NMAYQVGRYH 258
>gi|290791095|gb|ADD63320.1| KorB transcriptional repressor protein/plasmid partitioning protein
[uncultured bacterium pAKD4]
Length = 357
Score = 45.4 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 52/254 (20%), Positives = 88/254 (34%), Gaps = 24/254 (9%)
Query: 9 RL-GRG-LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEG 62
L G G L+AL+ + + + + I +PH PR F E
Sbjct: 33 GLEGMGDLSALLAGPTAAAN---------GGGPLDLDMGLIDEDPHQPRTEDNPGFSDES 83
Query: 63 LEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI+ G+ P+ VR G Y I G RRFR +K A + +P I +
Sbjct: 84 LDELAASIRLRGVKTPISVRDNPDAPGRYLINHGARRFRGSKRADKATIPGFI----DND 139
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E V +++ E Y G + +I + KS + V +L LP
Sbjct: 140 YNEADQVVENLQRNELTAREIADYIGRELAKGVKKGEIAKAISKSPAFVTQHAALLDLPD 199
Query: 181 SVREMIRKEEISL-GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ E + LV+ + + T V+ ++ K
Sbjct: 200 PIAEAFNSGRVKDVTVVNELVTAFKKKPQEVTDWLEDENQEITRGSVKLL--REFLDDKR 257
Query: 240 FEGSREKEKYLTDL 253
+++ D+
Sbjct: 258 KHEDDDRDPNTVDV 271
>gi|75674452|ref|YP_316873.1| helix-turn-helix, Fis-type [Nitrobacter winogradskyi Nb-255]
gi|74419322|gb|ABA03521.1| helix-turn-helix, Fis-type [Nitrobacter winogradskyi Nb-255]
Length = 785
Score = 45.4 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
S I + SI+P NPR+ F+ +E L SI+ G++Q L+VR ++I++GERR
Sbjct: 2 SIQTIPLQSILPPQGNPRSAFDPATIEGLAASIRQDGLLQNLVVRPSRGRQFRIVSGERR 61
Query: 98 FRA 100
+RA
Sbjct: 62 YRA 64
>gi|83956078|ref|ZP_00964560.1| hypothetical protein NAS141_02756 [Sulfitobacter sp. NAS-14.1]
gi|83839644|gb|EAP78823.1| hypothetical protein NAS141_02756 [Sulfitobacter sp. NAS-14.1]
Length = 726
Score = 45.4 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 86/214 (40%), Gaps = 13/214 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FE 59
M+ + +K + + + T+ + I + + +P N R
Sbjct: 1 MAKSQTKAKTTK------PPMAAKTADVGTTAITMTQDLRLIPLDQLELSPLNVRKVAAS 54
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR-----AAKMASLSEVPVIIR 114
+ +L SI +GI Q L+V A+ G + + AG RR + A+ ++ PV
Sbjct: 55 ATDDAELLASIHENGIKQNLVVHALPEGKFAVDAGGRRLKALKQLASDGVIPNDHPVSCL 114
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
D ++++ + EN+QR ++P ++ + Q+I+E + G S V L+
Sbjct: 115 VEDEQNAIVTSTTENLQRAAMHPADQFEAFAQMIAEGRKEDDIALK-FGVSVDLVRRRLK 173
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
+ ++ + E R E++L T D
Sbjct: 174 LARIAPELIEQFRAGEMTLECVMAFTLTDDHDRQ 207
>gi|317483557|ref|ZP_07942539.1| ParB-like partition protein [Bifidobacterium sp. 12_1_47BFAA]
gi|316914983|gb|EFV36423.1| ParB-like partition protein [Bifidobacterium sp. 12_1_47BFAA]
Length = 471
Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 6/112 (5%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL----YKIIA 93
S I++ +++PNP+NPR + + +L SIK G+ Q L+V ++++
Sbjct: 4 SIIDINVKNLIPNPNNPRR--DVGDVTELADSIKEQGLQQALVVTPDHEEHGERLFRVVI 61
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYE 145
G RR A K+A L VP ++R +D K+ E+ +VEN QR DL PLEEA GY+
Sbjct: 62 GHRRLAACKLAGLESVPCVVRELDAKTERELMLVENCQRSDLTPLEEADGYQ 113
>gi|45368552|ref|NP_990880.1| KorB [Achromobacter denitrificans]
gi|282167252|ref|YP_003358116.1| KorB [Burkholderia cepacia]
gi|44937721|gb|AAS49421.1| KorB [Achromobacter denitrificans]
gi|70779418|gb|AAZ08198.1| KorB [Burkholderia cepacia]
Length = 357
Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 52/254 (20%), Positives = 88/254 (34%), Gaps = 24/254 (9%)
Query: 9 RL-GRG-LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEG 62
L G G L+AL+ + + + + I +PH PR F E
Sbjct: 33 GLEGMGDLSALLAGPTAAAN---------GGGPLDLDMGLIDEDPHQPRTEDNPGFSDES 83
Query: 63 LEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
L++L SI+ G+ P+ VR G Y I G RRFR +K A + +P I +
Sbjct: 84 LDELAASIRLRGVKTPISVRDNPDAPGRYLINHGARRFRGSKRADKATIPGFI----DND 139
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E V +++ E Y G + +I + KS + V +L LP
Sbjct: 140 YNEADQVVENLQRNELTAREIADYIGRELAKGVKKGEIAKAISKSPAFVTQHAALLDLPD 199
Query: 181 SVREMIRKEEISL-GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKI 239
+ E + LV+ + + T V+ ++ K
Sbjct: 200 PIAEAFNSGRVKDVTVVNELVTAFKKKPQEVTDWLEDENQEITRGSVKLL--REFLDDKR 257
Query: 240 FEGSREKEKYLTDL 253
+++ D+
Sbjct: 258 KHEDDDRDPNTVDV 271
>gi|75677040|ref|YP_319461.1| ParB-like nuclease [Nitrobacter winogradskyi Nb-255]
gi|74421910|gb|ABA06109.1| ParB-like nuclease [Nitrobacter winogradskyi Nb-255]
Length = 726
Score = 45.4 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 76/210 (36%), Gaps = 12/210 (5%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKSHGIIQPL 79
V + E + I ++ + +P N R +E SI + GI+Q L
Sbjct: 42 VAATESGAETVSVAASGETVFIPLNKLKKSPRNARKIPHGEADIEAYAASIAAKGILQNL 101
Query: 80 IVRA------IDNGLYKIIAGERRF-----RAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
+V G Y + GE R RA + P+ EI++ E
Sbjct: 102 VVEPERDEEGQPTGFYFVTIGEGRRLAQLLRAKRKQIKKTEPIRCVIDTANDPFEISLDE 161
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
NV R ++P ++ + +L G+ +I + G + V LR+ + + ++ R
Sbjct: 162 NVTRTAMHPADQFEAFRELAETRGWGAEEIAARFGVTAHVVKQRLRLGAVSPKLMQVYRD 221
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKKMS 218
++L T D QV S +
Sbjct: 222 GGLTLDQLMAFAITEDHSRQEQVYESLSYN 251
>gi|291530905|emb|CBK96490.1| ParB-like partition proteins [Eubacterium siraeum 70/3]
Length = 336
Score = 45.1 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPN--PHNPRNYFE 59
+N +K +L GL++ E I I I P +P +
Sbjct: 6 TNIKAKGKLN-GLSSF----------SSLPAEDDTVKITPIPIDMIDPYTESLHPFKSYT 54
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNK 119
+ +++L +SIK +G++QP+IV +G Y IIAG RFRA + ++ + ++RN
Sbjct: 55 VDKIDELAESIKVNGLLQPIIVSRKSDGRYMIIAGHNRFRACQKNNMDTIDAVVRNELTA 114
Query: 120 SSLEIAIVENV--QRKDLNPLEEALGYEQLIS 149
+ ++ +V+ QR L E AL Y+
Sbjct: 115 TQRKLMMVDTNLEQRHKLTAKERALAYKIKQD 146
>gi|73746032|ref|YP_302624.1| KorB [Sphingomonas sp. A1]
gi|72534598|dbj|BAE19718.1| KorB [Sphingomonas sp. A1]
Length = 355
Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 89/232 (38%), Gaps = 12/232 (5%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDLCQSIKSHGIIQPLIVR 82
P+ + + I +PH PR F E + ++ ++IK+ G+ P+ VR
Sbjct: 40 EPQAANAAPGGGPQELPLDLIDEDPHQPRTADNPGFSPESIAEIGETIKARGVKSPISVR 99
Query: 83 AID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
G Y I G RR+R +K A + +P I + E V +++ E
Sbjct: 100 ENPDAPGRYLINHGARRYRGSKWAEKTTIPAFI----DNDYNEADQVIENLQRNELTARE 155
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
+ G +++I +GKS + V + +L LP + + +
Sbjct: 156 IADFIGRELAKGKKKSEIAKEIGKSPAFVTQHVTLLDLPEPIAKAFNAGRSKDVTVINEL 215
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+T+ + +V V + ++ + + + K+ +G E++ D
Sbjct: 216 ATAYKKNPEEVRVWLEDDSQELTRGSVKMLREYLEDKRSQDG--ERDPNTVD 265
>gi|68500025|gb|AAY97968.1| KorB [Plasmid pMCBF1]
gi|133711785|gb|ABO36605.1| KorB protein [uncultured bacterium pMCBF6]
Length = 345
Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 85/233 (36%), Gaps = 10/233 (4%)
Query: 26 DSPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDLCQSIKSHGIIQPLIV 81
+ P + + + + I +P+ PR F + LE+L +I+ G+ P+ V
Sbjct: 30 NDPAGASSQQGDGPLHLPLDVIDEDPNQPRKSDNPGFSDDSLEELAVTIRDRGVKSPISV 89
Query: 82 RAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
R Y I G RR+RA+++A +P + + E V +++
Sbjct: 90 RENPEAEGRYLINHGARRYRASRLAGKETIPAFV----DNDYNEADQVIENLQRNELTAR 145
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL 199
E + G + +I +GKS + V + +L LP + E+
Sbjct: 146 EIADFIGRELAKGKKKGEIAKEIGKSPAFVTQHVTLLDLPEPIAEVFNNGRAKDVTVVNE 205
Query: 200 VSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+ T+ + +V ++ + + K+ + E++ D
Sbjct: 206 LVTAYKKNPDEVGAWLADDSQELTRGSVKLLREFLDDKRRHQDDDERDPNTVD 258
>gi|19352343|ref|NP_598101.1| KorB protein [uncultured bacterium]
gi|19070010|emb|CAD24326.1| KorB protein [uncultured bacterium]
Length = 353
Score = 45.1 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 89/232 (38%), Gaps = 12/232 (5%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDLCQSIKSHGIIQPLIVR 82
P+ + + I +PH PR F E + ++ ++IK+ G+ P+ VR
Sbjct: 40 EPQAANAAPGGGPQELPLDLIDEDPHQPRTADNPGFSPESIAEIGETIKARGVKSPISVR 99
Query: 83 AID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
G Y I G RR+R +K A + +P I + E V +++ E
Sbjct: 100 ENPDAPGRYLINHGARRYRGSKWAEKTTIPAFI----DNDYNEADQVIENLQRNELTARE 155
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
+ G +++I +GKS + V + +L LP + + +
Sbjct: 156 IADFIGRELAKGKKKSEIAKEIGKSPAFVTQHVTLLDLPEPIAKAFNAGRSKDVTVINEL 215
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+T+ + +V V + ++ + + + K+ +G E++ D
Sbjct: 216 ATAYKKNPEEVRVWLEDDSQELTRGSVKMLREYLEDKRSQDG--ERDPNTVD 265
>gi|325527490|gb|EGD04821.1| parB-like partition protein [Burkholderia sp. TJI49]
Length = 342
Score = 45.1 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 84/220 (38%), Gaps = 34/220 (15%)
Query: 1 MSNNYSKR-----------RLGRGLA----AL---------------IGEVNQSIDSPEK 30
M+ + SK L RGLA AL + +
Sbjct: 1 MAKDTSKEKKPTGNLHLAAGLLRGLAQENAALETRLPEPLTAPPAAAEPSPVAAPAAATP 60
Query: 31 KTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ +++ +PNP NPR ++ L +L ++K G I+P+ V + K
Sbjct: 61 ADALDLGAPQKVAVKDCIPNPFNPRVFYSESSLHELALTLKREGQIEPIKVTRLPEFPGK 120
Query: 91 --IIAGERRFR-AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+I G+RR R + + + + IA N + ++A+ +++L
Sbjct: 121 LVVIDGQRRLRATSINGDETINATFRTDHTPEQLYTIAYRANHDHERQTIFDDAVAWKRL 180
Query: 148 ISEYGYTQNDI-GSIVGKSRSHVANILRILKLPSSVREMI 186
+ E + + +GK ++ ++ L + LP+++ E +
Sbjct: 181 LDEKVFPDQNTLAEKIGKDKASISKTLSLNALPNTLLERM 220
>gi|332144332|dbj|BAK19859.1| putative plasmid partitioning protein ParB [Streptomyces rochei]
Length = 354
Score = 44.7 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 26/224 (11%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
LA+L G E + + + P P NPR F+ L +L + + +
Sbjct: 8 LASLAG------SKVEAVPGASRPELIHVHPNLVAPTPLNPRRAFDETELVELGEDM-RN 60
Query: 74 GIIQPLIV---------------RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-- 116
G +QP + + D Y + AGERR+RAA+ LS + +++R+
Sbjct: 61 GQLQPCVAVNKTAYLKLYPEHADQLPDTCRYVMAAGERRWRAARQVGLSNIDLMLRHDLT 120
Query: 117 -DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
L + ENVQR + NP+EEA G ++ + Q +GKS++ + +
Sbjct: 121 ETRVRFLAAVLSENVQRANFNPIEEADGLRAMLELHDGNQAAAARAMGKSKAWFNQRIGL 180
Query: 176 LKLPSSVREMIRKEEIS-LGHARTLVSTSDPLSLAQVIVSKKMS 218
L+L + +++ + E++ R + A +
Sbjct: 181 LRLSDEMVQLVLQGELTAFRDMRRYAAMPPDQQYAAWKADQDQP 224
>gi|71908158|ref|YP_285745.1| ParB family protein [Dechloromonas aromatica RCB]
gi|71847779|gb|AAZ47275.1| ParB family protein [Dechloromonas aromatica RCB]
Length = 587
Score = 44.7 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 41 CISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV--RAIDNGLYKIIAGERRF 98
+ + IV NPR YF+ + DL +++ G + I+ L++I+AGERR+
Sbjct: 8 TLPLRLIVQGK-NPREYFDPIEMADLEAGLRAAGRVVQPIIVRPIPGTDLFEIVAGERRW 66
Query: 99 RAAKMA--SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
RAAK ++PV+I ++++ + IA++EN R ++ EEA ++ + + +
Sbjct: 67 RAAKNVFGDDYDMPVVIEALNDEEAEAIAVIENHHRAPMSHAEEAHAAKRQLLRHKGDKE 126
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ + +G + L +L +V + +I LGHA L A +
Sbjct: 127 EAAASLGWKPELLERRLALLTCTPAVLSALTCRQIQLGHAELLAGVPPDKQDAVLTGVLA 186
Query: 217 MSVR 220
V
Sbjct: 187 HKVP 190
>gi|291302852|ref|YP_003514130.1| parB-like partition protein [Stackebrandtia nassauensis DSM 44728]
gi|290572072|gb|ADD45037.1| parB-like partition protein [Stackebrandtia nassauensis DSM 44728]
Length = 477
Score = 44.7 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 95/233 (40%), Gaps = 19/233 (8%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG-LYKIIAGER 96
+ I ++PNP N R + DL SI G++QP++ + + ++AG R
Sbjct: 2 EIVELDIEQLIPNPDN-RPSDAEPDISDLLDSIPIVGLLQPIVAVPTEEPGQHMVVAGHR 60
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R A + P +I + + L + + ++ + + ++ +G+
Sbjct: 61 RRLALIALKHATAPCVIAADADAAQLVASRLAENLNREAMRPTDEARDYEQLALFGWKPE 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
I + G+S+ HVA L + KLP + ++ + L A + + A
Sbjct: 121 RIAKVAGRSKKHVAGALALSKLPEAAQQAADDGTLDLALAAEVAEFAADDPKA------- 173
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKV---GLNIS 266
E +++ + R I E R+++K D +K+ +++ G+ ++
Sbjct: 174 -----MERILKGASSHWGARHAIDEEKRKRDK--KDTAEKLKAQLVLDGVRVT 219
>gi|116687308|ref|YP_840554.1| nuclease [Burkholderia cenocepacia HI2424]
gi|116653023|gb|ABK13661.1| ParB domain protein nuclease [Burkholderia cenocepacia HI2424]
Length = 709
Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 14/203 (6%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
AL + PE + I + +V +P+N R G+++L +I G+
Sbjct: 10 ALAHDAGVPPAPPEAHRTA--DELRDIPLKRLVASPYNVRRV-PPTGIKELALNIWKVGL 66
Query: 76 IQPLIVRAI-----DNGLYKIIAGERR-----FRAAKMASLSEVPVIIRNVDNKSSLEIA 125
+Q LIV + + AGERR + ++ PV R V + ++ ++
Sbjct: 67 LQNLIVHPMKVGARKAQTFGAAAGERRRLALIYLFEHDYIPADHPVRCRVVPVEDAVLLS 126
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
EN R+ ++P + Y L+ G + +I + G V L++ ++ + ++
Sbjct: 127 ATENEMREPMHPADACDAYRILVES-GRSIEEIADLYGVHPKTVQRRLKLARVSPKLVDL 185
Query: 186 IRKEEISLGHARTLVSTSDPLSL 208
R EI L + L +
Sbjct: 186 FRTGEIKLDQMQALALSDSHDEQ 208
>gi|262371291|ref|ZP_06064610.1| transcriptional regulator [Acinetobacter johnsonii SH046]
gi|262313765|gb|EEY94813.1| transcriptional regulator [Acinetobacter johnsonii SH046]
Length = 431
Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 12 RGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIK 71
+GL AL G V + + + I + +P NPR F+ E + +L SI
Sbjct: 5 KGLEALKGAVGKL-----NNNNLAGKKLVILQIGDVEADPENPRQNFDQEKIIELAMSIA 59
Query: 72 SHGIIQPLIVRAID 85
S G ++P+ VR
Sbjct: 60 SVGQLEPISVRDNG 73
>gi|262371204|ref|ZP_06064524.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262313811|gb|EEY94858.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 317
Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 93/243 (38%), Gaps = 11/243 (4%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES--EGLEDLCQSIKSHGIIQP 78
+N + +I + + I I + H PR + + +E L SI ++G I P
Sbjct: 6 INAAGTGKVSLISSIENNIVDVPIELIDFSEHQPRIITDKVLQEVEILATSIATNGQIYP 65
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI---AIVENVQRKDL 135
++V + + G + A L + D+KS + ++++N+ R +L
Sbjct: 66 IVVIKKEER--YELVGGEKRFRAVRDILKHKTIRAIIRDDKSKEKTALISLIDNLHRSNL 123
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ E ++ +E+GY+ ++ I K + + R++ + +I+
Sbjct: 124 SDFELVNAIQKHCNEFGYSIQNVEFITQKYQLDQSKYFRLMSFYKLPDYIKEDLKINPKA 183
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
+ L ++++ + ++ + E + + ++ ++EK
Sbjct: 184 ISGATAQQLLTELNKLVLKFNHQLVESATFNIWKKYLNEFTETNRPSKK----FIYEIEK 239
Query: 256 KIS 258
++
Sbjct: 240 ALT 242
>gi|254418926|ref|ZP_05032650.1| ParB-like nuclease domain family [Brevundimonas sp. BAL3]
gi|196185103|gb|EDX80079.1| ParB-like nuclease domain family [Brevundimonas sp. BAL3]
Length = 563
Score = 44.7 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
AL E ++ + ++ E + H ++PNP NPR ++ LE L S ++ G
Sbjct: 63 NALTPEGRDALAALDRAAGAGAE--LRVMPHLLIPNPMNPRRVYDQAALEGLADSAEAEG 120
Query: 75 IIQPLIVRAIDNG--LYKIIAGERRFRAAK 102
+ + + + I AG RR+RAA+
Sbjct: 121 DFEQPLSVSPPDMLGNRFIWAGHRRWRAAQ 150
>gi|295689954|ref|YP_003593647.1| ParB domain-containing protein nuclease [Caulobacter segnis ATCC
21756]
gi|295431857|gb|ADG11029.1| ParB domain protein nuclease [Caulobacter segnis ATCC 21756]
Length = 746
Score = 44.7 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 37 ESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKSHGIIQPLIVRA-----IDNGLYK 90
I ++ + +P N R +E + SI G++QPL+V + G Y
Sbjct: 37 GEVRDIPLNRLKASPKNARRVGHSAEVIAARAASITHKGVLQPLVVEPEIKDGRETGYYL 96
Query: 91 IIAGERRFRA----AKMASLSEVPVIIRNVDNKSSL-EIAIVENVQRKDLNPLEEALGYE 145
+ AGE R +A AK +L++ + VD + E+++ EN+ R+ ++P ++ ++
Sbjct: 97 VSAGEGRRQALRLLAKRKALAKGAAVRCVVDTTNDPAEVSMDENLSREPMHPADQFEAFK 156
Query: 146 QLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
L GY +I + G V LR+ + ++ ++ R+E ++L DP
Sbjct: 157 DLAERKGYGAEEIAARFGVKPDIVRQRLRLGAVAPALLDLYREEALTLEQVTAFAVNPDP 216
Query: 206 LSLAQVIVSKKMSVRD 221
QV R
Sbjct: 217 ERQMQVYAQLCAQGRQ 232
>gi|157265493|ref|YP_001468051.1| ParB-like nuclease/partitioning protein [Thermus phage P74-26]
gi|156905388|gb|ABU97031.1| ParB-like nuclease/partitioning protein [Thermus phage P74-26]
Length = 228
Score = 44.7 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 28/78 (35%), Gaps = 1/78 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ + I PNP NP E E L S++ G +P+IV +D E
Sbjct: 4 ELKQVPLTDIQPNPWNPHR-MTEEEFEALIASVREDGQWRPIIVVEMDVPDEYTPKVEFP 62
Query: 98 FRAAKMASLSEVPVIIRN 115
+R L V +
Sbjct: 63 YRIVDGEHLYRALVQLHM 80
>gi|157265376|ref|YP_001467935.1| ParB-like nuclease/partitioning protein [Thermus phage P23-45]
gi|156905271|gb|ABU96915.1| ParB-like nuclease/partitioning protein [Thermus phage P23-45]
Length = 228
Score = 44.7 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 28/78 (35%), Gaps = 1/78 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ + I PNP NP E E L S++ G +P+IV +D E
Sbjct: 4 ELKQVPLTDIQPNPWNPHR-MTEEEFEALIASVREDGQWRPIIVVEMDVPDEYTPKVEFP 62
Query: 98 FRAAKMASLSEVPVIIRN 115
+R L V +
Sbjct: 63 YRIVDGEHLYRALVQLHM 80
>gi|209519416|ref|ZP_03268213.1| parB-like partition protein [Burkholderia sp. H160]
gi|209500155|gb|EEA00214.1| parB-like partition protein [Burkholderia sp. H160]
Length = 351
Score = 44.3 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 89/230 (38%), Gaps = 7/230 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL--IVRAIDNGLYKIIA 93
P +++ +I P+P NPR ++ + +L ++ G Q + I + G Y +
Sbjct: 83 PGQVIELALKTIKPSPFNPRYFYVKSSIAELAVNLAKQGQQQAIHVIPDYDNPGTYFVSD 142
Query: 94 GERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLNPLEEALGYEQL-ISEY 151
G RR RA K A+ V I+ ++ S ++ NVQR + A+ + + +
Sbjct: 143 GGRRVRALKEANKESVKAIVIDLPIGIQSYKLGYDLNVQRDSQTVFDNAVVWRRFLDERH 202
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL--- 208
+Q ++ +G S VA L I KLP +V + + G +
Sbjct: 203 FQSQKELAEHLGLDESTVAVALSIAKLPEAVMQEMVARPDRFGSNMAYQVGRYHTARGAD 262
Query: 209 AQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
A + + ++ D K + +++Y LE K+
Sbjct: 263 ATLRLINRILSDDLSTRQVADIVKGRASAQETAKPAGRQRYAQRLEIKLE 312
>gi|58616691|ref|YP_195900.1| transcriptional repressor protein KorB [Achromobacter xylosoxidans
A8]
gi|58416282|emb|CAI47878.1| transcriptional repressor protein KorB [Achromobacter xylosoxidans]
Length = 353
Score = 44.3 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 10/170 (5%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDLCQSIKSHGIIQPLIVR 82
P+ + + I +PH PR F E + ++ ++IK G+ P+ VR
Sbjct: 40 EPQAANAAPGGGPQELPLDLIDEDPHQPRTADNPGFSPESIAEIGETIKLRGVKSPISVR 99
Query: 83 AID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
G Y I G RR+R +K A + +P I + E V +++ E
Sbjct: 100 ENPDAPGRYLINHGARRYRGSKWADKTTIPAFI----DNDYNEADQVIENLQRNELTARE 155
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
+ G +++I +GKS + V + +L LP + E
Sbjct: 156 IADFIGRELAKGKKKSEIAKEIGKSPAFVTQHVTLLDLPEPIAEAFNTGR 205
>gi|71276599|ref|ZP_00652872.1| ParB-like partition protein [Xylella fastidiosa Dixon]
gi|71900103|ref|ZP_00682245.1| ParB-like partition protein [Xylella fastidiosa Ann-1]
gi|182682764|ref|YP_001830962.1| parB-like partition protein [Xylella fastidiosa M23]
gi|71162589|gb|EAO12318.1| ParB-like partition protein [Xylella fastidiosa Dixon]
gi|71730120|gb|EAO32209.1| ParB-like partition protein [Xylella fastidiosa Ann-1]
gi|182632874|gb|ACB93649.1| parB-like partition protein [Xylella fastidiosa M23]
Length = 343
Score = 44.3 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 12/198 (6%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEG 62
++ G GL + IG+++ +D+PE + + + I + + PR F E
Sbjct: 17 RKSSGFGLDS-IGDLSGLLDTPETVGN-VSTGFIELPLDLIDEDLNQPRKADNPGFLPES 74
Query: 63 LEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+ ++ +IK G+ P+ VR G Y I G RR+R AK A +P I +
Sbjct: 75 IAEIGATIKERGVKSPISVRENLEIQGRYIINHGARRYRGAKWAGKESIPAFI----DND 130
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
E V +++ E + ++DI +GKS + + + +L LP
Sbjct: 131 YNETDQVIENLQRNELTAREIADFIGRELAKNKKKSDIAKEIGKSPAFITQHITLLDLPE 190
Query: 181 SVREMIRKEEISLGHART 198
+ ++ +
Sbjct: 191 PIADVFNTGRVRDVTMVN 208
>gi|171913542|ref|ZP_02929012.1| parB-like partition protein [Verrucomicrobium spinosum DSM 4136]
Length = 909
Score = 44.3 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 29/259 (11%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ S E + + ++ NPR F+ LE+L ++I+ G+ QPL+VR
Sbjct: 3 ATQSTEAAPAPTRATVVYLPHENLHECILNPRKEFKPGPLEELSKNIEEMGVKQPLLVRP 62
Query: 84 IDNG--LYKIIAGERRFRAAKM------------------ASLSEVPVIIRNVDNKSSLE 123
Y+IIAG RR+R M A L E+P ++ ++ + + E
Sbjct: 63 SRTVAGQYEIIAGARRWRGNGMALDRVVNYDDVEQVHRLVAKLGELPCMVEDMSDVQARE 122
Query: 124 IAIVENVQRKD------LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
+VEN+QR+D + + L + + YT I +G+S SHV L++ +
Sbjct: 123 FMLVENLQREDLTVVEEADGYADLLALKGEDGQPLYTVAKIAERIGRSESHVTQRLKLRR 182
Query: 178 LPSSVREMIRKEEISLGHAR---TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKE 234
P + E K I H + LA+ I++ +M +D V+E
Sbjct: 183 APKRLLEACEKGVIGSRHCELVGRIPDVEAREELAKAILAPQMRDKDLPLNVRETVALIR 242
Query: 235 KRKKIFEGSREKEKYLTDL 253
+ + + +L
Sbjct: 243 RDYMLSLKGCGFDVDDAEL 261
>gi|224369183|ref|YP_002603347.1| two component protein (ParB-like partition domain/site-specific DNA
modification methylase) [Desulfobacterium autotrophicum
HRM2]
gi|223691900|gb|ACN15183.1| two component protein (ParB-like partition domain/site-specific DNA
modification methylase) [Desulfobacterium autotrophicum
HRM2]
Length = 530
Score = 44.3 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 6/212 (2%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
++ ++++S+ NP++PR L L SI+ GI+ P +V + Y+ I G+R
Sbjct: 7 KTIKELNVNSLTRNPNHPRKEV--GDLTKLTLSIRHEGILTPPVVAKVGENTYQPIDGDR 64
Query: 97 RFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
R AK + ++ + + + NV+R LN +E AL +++ E+GY+
Sbjct: 65 RLEVAKALGYESLTCVVYEGLTEAEIAQKSYILNVERNQLNNIERALHIKKMKDEFGYSH 124
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART---LVSTSDPLSLAQVI 212
+++ + S+ + +L +L LP ++ + E++ H + T L A++
Sbjct: 125 DELEILGYGSKGQTSKLLSLLDLPEEIQGNLINGELTKAHCIELSKIKDTKQMLRTAKLA 184
Query: 213 VSKKMSVRDTEELVQEQDNKKEKRKKIFEGSR 244
+ S + V+ K K +
Sbjct: 185 IENDWSSKKVGNTVERLKRNTNKAAKKEIPAN 216
>gi|301168220|emb|CBW27809.1| putative chromosome segregation protein [Bacteriovorax marinus SJ]
Length = 299
Score = 44.3 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 82/215 (38%), Gaps = 3/215 (1%)
Query: 35 IPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAG 94
D I I I+ R F +++L +IK +G+IQPL++ G I G
Sbjct: 37 SGAKLDEILIKDIIV-KEQVRTKFNDASIKELAANIKVNGLIQPLVLYKTKKGYTLIC-G 94
Query: 95 ERRFRAAKMASLSEVPVII-RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
ERR+RA ++ + P + N + + I EN R+ L+ +++A G
Sbjct: 95 ERRYRAMTSINMKKCPCFVLENKTEEELMAIQFSENSSREALHYIDKADGILNYQKATKA 154
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
++ I + +G S+S V L I ++P+ +RE + I L + ++
Sbjct: 155 SERKICAALGISKSEVHRSLLIARMPAKLREAAKIHNIEKYVLLELDALEKSPLKTKLTK 214
Query: 214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
+++ + +
Sbjct: 215 LVHTGEITKRSQLKKAIKGGVVAAGTKKKASTSSA 249
>gi|330822220|ref|YP_004362441.1| Chromosome partitioning protein ParB [Burkholderia gladioli BSR3]
gi|327374057|gb|AEA65411.1| Chromosome partitioning protein ParB [Burkholderia gladioli BSR3]
Length = 340
Score = 43.9 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 57/305 (18%), Positives = 109/305 (35%), Gaps = 31/305 (10%)
Query: 11 GRGLAALIGEVNQSIDSPE----------KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
GR +L+ E S D+ ++ + I I NP N R ++
Sbjct: 37 GR--ESLLSEQPASADAKHGGPDFYVETLERAGKVKAITTTWPIDMIDDNPLNSRRIYDE 94
Query: 61 EGLEDLCQSIKSHGIIQPLIV--RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
+ SI G + P + D +I G+ R RA SE+ V I +
Sbjct: 95 AKVRARANSIAKDGQMLPALAARHPSDPKKLILIDGQYRKRARIFLKHSELDVKILDGLE 154
Query: 119 K-SSLEIAIVENVQRKDLNPLEEALGYEQLISEY-GYTQNDIGSIVGKSRSHVANILRIL 176
+ +A N +R+ + L+ A Y+ L+ E Q + ++VG+S+ V L +L
Sbjct: 155 QIDFWRLARTANSEREQESALDAAYAYKALLDEGLAPDQERLAALVGESKGAVNKHLALL 214
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
LP ++I G ++ + ++L + V V + K
Sbjct: 215 DLPEPALDLIADHPELFG-----INMAYEITLYRKAVQNDDRTLQLINRVITEQLSFRKV 269
Query: 237 KKIFEGSREKEKYLTDLEKKIS------SKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
+ I + ++ + ++ + +G IK + G+ I +Q++
Sbjct: 270 EAIRKALQKGPRQRNPTARQFKYTRPDGTSIGT---IKEWGD-GRIQIDLNLGDQVERFR 325
Query: 291 SLLGE 295
L
Sbjct: 326 EALQN 330
>gi|238924410|ref|YP_002937926.1| chromosome partitioning protein, ParB family [Eubacterium rectale
ATCC 33656]
gi|238876085|gb|ACR75792.1| chromosome partitioning protein, ParB family [Eubacterium rectale
ATCC 33656]
Length = 450
Score = 43.9 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 7/221 (3%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAG 94
+ I + I P+P NPR + L +L +SIK +GI+Q L V + Y I G
Sbjct: 4 KGIVTIGLEHIHPHPDNPRK--DLGDLTELAESIKKNGIMQNLTVIPKEGEPGEYITIIG 61
Query: 95 ERRFRAAKMASLSEVPVIIRN-VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
RR AAK+A ++E P + + +K + + EN+QR DL E+A G++ ++
Sbjct: 62 HRRSAAAKLAGVTEAPCRVVEGMTDKEQMSTMLEENMQRNDLTIWEQAQGFQMMLDLGET 121
Query: 154 TQNDIGS--IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
K+ H NI ++ +E ++SL L D + ++
Sbjct: 122 EDTIAEKTGFSKKTIRHRLNIAKLDSKTLMEKERQDGYQLSLTDLYELEKIKDVKTRDKI 181
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+ S + Q +K + + K+ L
Sbjct: 182 LKDSTDSRDLARRAINAQKEQKRQENMKLYVAMMKKLGLKK 222
>gi|189913117|ref|YP_001965005.1| ParB-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|189913452|ref|YP_001964680.1| Putative chromosome partitioning protein ParB [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|167777793|gb|ABZ96092.1| ParB-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167781520|gb|ABZ99816.1| Putative chromosome partitioning protein ParB [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 292
Score = 43.9 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 14/250 (5%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
I I I+ +NPR F + +L SI +G++QP++VR G Y
Sbjct: 28 SSENAAQHQTIDIPIDLIIT-ENNPRKTFNETSIRELADSISQYGLLQPIVVRK-KAGKY 85
Query: 90 KIIAGERRFRAAKMASLSEVPV---IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
++I GERR+RA K+ +P + +D EI +VEN+QR+DL+ + AL ++
Sbjct: 86 ELINGERRYRAHKLLKSKTIPAVVKNVEQIDITKLPEIKLVENLQREDLSESDLALSLQE 145
Query: 147 LISEYGYTQNDIGSIVGKSRSHVANILR----ILKLPSSVREMIRKEEISLGHARTLVST 202
L + + T + + KS V + + + + + +
Sbjct: 146 LKNRHKETNEQLAKRISKSAQWVKTKIAHAEILKETSLNSNVDKSHPIYQIPTSLFTEIA 205
Query: 203 SDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK-EKYLTDLE-KKISSK 260
+S + + + + + +++ +E + + + K + L+ LE K + SK
Sbjct: 206 PLDVSNRKKAIDYLIKGLEKKGDFPSRNDLREYVRPLKPTKQTKAKPKLSQLELKDLKSK 265
Query: 261 VGLNISIKHR 270
+ IK +
Sbjct: 266 LA---KIKEK 272
>gi|153803752|ref|ZP_01958338.1| ParB family protein [Vibrio cholerae MZO-3]
gi|124120714|gb|EAY39457.1| ParB family protein [Vibrio cholerae MZO-3]
Length = 86
Score = 43.9 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNI 265
+ +AQ + K+++VR TE+LV++ + ++ + L + +S K+ +
Sbjct: 1 MEIAQQVAKKQLTVRQTEQLVKK-----CLSDPSDAKNVSEDLEIQQLSQNLSEKLAAKV 55
Query: 266 SI-KHRNNKGQFCIKYETNEQLKIICSLLGE 295
SI + N K + I + +L+++ + L
Sbjct: 56 SIVRTPNGKSKVTISLDEPHKLELLIAKLQN 86
>gi|167751577|ref|ZP_02423704.1| hypothetical protein EUBSIR_02578 [Eubacterium siraeum DSM 15702]
gi|167655385|gb|EDR99514.1| hypothetical protein EUBSIR_02578 [Eubacterium siraeum DSM 15702]
Length = 284
Score = 43.9 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIA 93
++ ISI + P ++P ++E ++ L +SIK HG++ P+IVR ++N Y+II+
Sbjct: 2 KNTKKNISIEKLHPFENHPYKVQDNEEMDALAESIKMHGVVSPIIVRPLENTADEYEIIS 61
Query: 94 GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
G RR A++ A ++EVP ++ ++D ++ + + N+ R+ + P E+A Y+ +
Sbjct: 62 GHRRVMASRKAGITEVPALVVSLDRDAAAIVLVDSNLHREHILPSEKAFAYKMKAEALAH 121
Query: 154 TQNDI 158
Sbjct: 122 KGYRT 126
>gi|190571927|ref|YP_001967651.1| KorB [Comamonas testosteroni CNB-1]
gi|311109760|ref|YP_003982612.1| transcriptional repressor protein KorB [Achromobacter xylosoxidans
A8]
gi|119943665|gb|ABM06187.1| KorB [Comamonas testosteroni CNB-1]
gi|310764449|gb|ADP19897.1| transcriptional repressor protein KorB [Achromobacter xylosoxidans
A8]
Length = 352
Score = 43.9 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 66/169 (39%), Gaps = 10/169 (5%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDLCQSIKSHGIIQPLIVRA 83
+ P + + I +PH PR F E + ++ ++IK G+ P+ VR
Sbjct: 40 EPQAANAAPGGPQELPLDLIDEDPHQPRTADNPGFSPESIAEIGETIKLRGVKSPISVRE 99
Query: 84 ID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
G Y I G RR+R +K A + +P I + E V +++ E
Sbjct: 100 NPDAPGRYLINHGARRYRGSKWADKTTIPAFI----DNDYNEADQVIENLQRNELTAREI 155
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
+ G +++I +GKS + V + +L LP + E
Sbjct: 156 ADFIGRELAKGKKKSEIAKEIGKSPAFVTQHVTLLDLPEPIAEAFNTGR 204
>gi|187729788|ref|YP_001837169.1| ParB [Sulfolobus islandicus]
gi|93117494|gb|ABE99644.1| ParB [Sulfolobus islandicus]
Length = 349
Score = 43.9 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 106/259 (40%), Gaps = 21/259 (8%)
Query: 42 ISIHSIVPN-PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
I + SI+ N R + E + +L +S+K G++ P+IVR + +G Y+II G R+ A
Sbjct: 3 IPLDSIIINDKILARVKIDDEFVNELKESMKEVGLLTPIIVRPVKDGKYEIIDGLHRYAA 62
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
AK ++ I N+++ +L +I N+QRK ++P++EA +LI+ YG ++ ++
Sbjct: 63 AKKLGWKDIEANIVNLNDVDALVYSITNNIQRKQMDPIDEAQAILKLINNYGLSETEVAR 122
Query: 161 IVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
+GKS + V+ + + + + + L + V K +
Sbjct: 123 RLGKSVAWVSQRIAVALKLPDEVKKLLESGRIPLSVAVLATRIPDKEKQIKFVRKVAEEQ 182
Query: 221 DTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKY 280
+ + +E G +K+ + L + N+ + I
Sbjct: 183 MSFDEAKEYLAILLNDTIYTIGYEG---------RKLEEFIDL-----LKKNEIKVVIDI 228
Query: 281 ETNEQL------KIICSLL 293
Q + + +
Sbjct: 229 REQSQFVNPQFTEELLKRI 247
>gi|329889256|ref|ZP_08267599.1| parB-like nuclease domain protein [Brevundimonas diminuta ATCC
11568]
gi|328844557|gb|EGF94121.1| parB-like nuclease domain protein [Brevundimonas diminuta ATCC
11568]
Length = 685
Score = 43.9 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 81/213 (38%), Gaps = 12/213 (5%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKSHGIIQP 78
+ ++ + ++ + +P N R +E SIK+ G++QP
Sbjct: 2 TAQSIETVATEAAFPAHGAEITVPLNRLKASPRNARKTPHSPATIEAFAASIKAKGVLQP 61
Query: 79 LIVRA------IDNGLYKIIAGERRFRAA-----KMASLSEVPVIIRNVDNKSSLEIAIV 127
+V I G Y + GE R + + A PV + + EI++
Sbjct: 62 PVVEIERDGEGIPTGNYLVTIGEGRRQGLRLLAKRKAIKRTHPVRVIVDAENDAHEISLD 121
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+ R+ ++P ++ +++L E GY +IG+ G S V LR+ + + E R
Sbjct: 122 ENMTREAMHPADQFEAFQRLAVEKGYGPEEIGARFGVSAHVVRQRLRLASVAPELIEAYR 181
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
+++ + D QV +
Sbjct: 182 AGGLTMDQLMGFAVSKDHERQRQVFYRIAQNTP 214
>gi|206479995|ref|YP_002235506.1| ParB-like nuclease domain protein [Burkholderia cenocepacia J2315]
gi|195945151|emb|CAR57778.1| ParB-like nuclease domain protein [Burkholderia cenocepacia J2315]
Length = 709
Score = 43.9 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 80/198 (40%), Gaps = 14/198 (7%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ + + + I + +V +P+N R G+++L +I G++Q LIV
Sbjct: 14 DAGVPPAPPEAHRTADELRDIPLKRLVASPYNVRRV-PPTGIKELALNIWKVGLLQNLIV 72
Query: 82 RAI-----DNGLYKIIAGERRFRAAKMASLSE------VPVIIRNVDNKSSLEIAIVENV 130
+ + AGERR R A + L PV R V + ++ ++ EN
Sbjct: 73 HPMKVGARKAQTFGAAAGERR-RLALVYLLEHDYIPADHPVRCRVVPVEDAVLLSATENE 131
Query: 131 QRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
R+ ++P + Y L+ G + +I + G V L++ ++ + ++ R E
Sbjct: 132 MREPMHPADACDAYRILVES-GRSIEEIADLYGVHPKTVQRRLKLARVSPKLVDLFRTGE 190
Query: 191 ISLGHARTLVSTSDPLSL 208
I L + L +
Sbjct: 191 IKLDQMQALALSDSHDEQ 208
>gi|172064553|ref|YP_001812203.1| parB-like partition protein [Burkholderia ambifaria MC40-6]
gi|171998038|gb|ACB68954.1| parB-like partition protein [Burkholderia ambifaria MC40-6]
Length = 555
Score = 43.9 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 59/181 (32%), Positives = 105/181 (58%), Gaps = 4/181 (2%)
Query: 51 PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMAS--LSE 108
NPR YF+ +E++ +++ G+ P+IVR +D+ +++IAG RR++AA +
Sbjct: 19 RRNPRVYFDDAEMEEMRATVRERGVDTPVIVRPLDDEYFELIAGGRRYKAAMETRGEDYD 78
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
+PV ++ VD + EIA++EN+QR +L+P EEA+ +L+ + + +G S +
Sbjct: 79 MPVTVKIVDEAEADEIALIENIQRSNLSPGEEAVDAARLLGRCKGDREEAAKRIGWSVAT 138
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTL--VSTSDPLSLAQVIVSKKMSVRDTEELV 226
+ + L +L S+V + +ISLGHA L +S + + VIV +K SV D ++LV
Sbjct: 139 LNSRLALLNCSSAVLNALNTRQISLGHAELLAAISKENQDKVLPVIVDEKRSVADVKKLV 198
Query: 227 Q 227
+
Sbjct: 199 E 199
>gi|757761|emb|CAA59940.1| unnamed protein product [Coxiella burnetii]
Length = 147
Score = 43.9 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 7/111 (6%)
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
E+ A + + AQ I+ K ++VR+ E+LVQ
Sbjct: 43 EMGHARALLTLPKDQQILFAQKIIDKNLTVREAEKLVQFAKT------PKETKPAPYADE 96
Query: 250 LTDLEKKISSKVGLNISIK-HRNNKGQFCIKYETNEQLKIICSLLGENDFE 299
+ ++S + I+I + +G+ I + + E++ + + E
Sbjct: 97 VQGWVNQLSRSLSSKIAININEKGEGKVIIHFTSPEEVDWLVEHFTDKAEE 147
>gi|333011549|gb|EGK30962.1| parB-like partition domain protein [Shigella flexneri K-227]
gi|333011663|gb|EGK31072.1| parB-like partition domain protein [Shigella flexneri K-227]
Length = 652
Score = 43.9 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLDSLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
++ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGQRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|330818810|ref|YP_004351027.1| parB-like partition protein [Burkholderia gladioli BSR3]
gi|327374352|gb|AEA65704.1| parB-like partition protein [Burkholderia gladioli BSR3]
Length = 343
Score = 43.5 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 98/264 (37%), Gaps = 14/264 (5%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIV--PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
++++ I + + P R Y E +L +++K + +I P++
Sbjct: 59 DALEAQLADAMRSGGQGLDIPVDKLHEVPGR---RRYMAPEKYAELRENLKHNKLINPVV 115
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLE 139
V + + + +G R+ A K V + + + A + N+ + DL E
Sbjct: 116 VLPRADAEWDVWSGHHRWDAHKDNGKPTVRCVLGNVESEIEAADGAFIANLMQSDLTDFE 175
Query: 140 EALGYEQLISEYG-YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
+ G + S + ++Q +I +G ++ V +L +LP+ ++ +
Sbjct: 176 KYQGIKNYQSNHPDFSQTEIAENLGLAKQQVNLLLAFDRLPADALAVVDLHK------AI 229
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
L +T+ K V + +L+ E + + K S EK K E
Sbjct: 230 LGATAAGDLATLTESGKAARVVEAVKLLAEGKFDQARAVKYAGASDEKPKQAAQAE-SFK 288
Query: 259 SKVGLNISIKHRNNKGQFCIKYET 282
K G + R K I+++T
Sbjct: 289 IKTGRAVWCDVRRAKNVMRIEFKT 312
>gi|296536866|ref|ZP_06898913.1| PRTRC system ParB family protein [Roseomonas cervicalis ATCC 49957]
gi|296262837|gb|EFH09415.1| PRTRC system ParB family protein [Roseomonas cervicalis ATCC 49957]
Length = 558
Score = 43.5 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 96/244 (39%), Gaps = 5/244 (2%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+G+V + + + + P I + N R + + L SI + GI+Q
Sbjct: 1 MGDVIPTPRQVDIEADMAPPRALLAPIGEVAAAGDNLRRHRAPDRDRQLRDSIAAMGILQ 60
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
PL+VR G + +I G R +AA+ L++VP+++R L + N+ R L P
Sbjct: 61 PLLVRPRAEGGWVVIEGHGRLQAAQELGLAQVPILVRPSGEAEQLAVQAATNIVRAPLEP 120
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
+++ + E GY+ + +G + + R+ +L ++ I K + H
Sbjct: 121 IDQWRAI-VSLQERGYSLVEAAGAIGIAERKARQLDRLGRLHPALLAEIEKSGMPADHVL 179
Query: 198 TLVSTSDPLSLAQVIVSKKM--SVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT--DL 253
V+++ P + A + + +L + +I + +
Sbjct: 180 IRVASAPPEAQAAALKAPGAWQGSGKARQLAWHNLSAALASARIPRSRAIFDPAEAGIAV 239
Query: 254 EKKI 257
E+ +
Sbjct: 240 EEDL 243
>gi|291460760|ref|ZP_06600150.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078
str. F0262]
gi|291416719|gb|EFE90438.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078
str. F0262]
Length = 304
Score = 43.5 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 101/267 (37%), Gaps = 15/267 (5%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISI--HSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
+ + + E + + + + + P + + E +E +SIK GI
Sbjct: 1 MAKTKATESQKNGSVEDAAVNIEHLDLKLSELHPFEGHLFKVLDDELMEQTVESIKQIGI 60
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
++PL+VR +G Y++I+G RR RAA +A L V V +RN+D+ ++ + N+QR+ +
Sbjct: 61 LEPLVVRPDTDGGYEVISGHRRLRAAYLAGLETVLVQVRNMDDDQAVIFMVDSNIQRETI 120
Query: 136 NPLEEALGYEQLISEYGYT-------QNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
P E A Y+ + + + +G+ + +S I + + IR
Sbjct: 121 LPSERAYAYKMKLEAMNHQGERRDLTYSQLGNKLDGKKSSEIMAEEIGTSKNQIFRYIRL 180
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
+ + + A + K + + + ++
Sbjct: 181 TNLIPEILDQVDEGKIKFNPAVELSYLKPDEQKEFLEAMDYAQTTPSLSQAQRIKNMSQE 240
Query: 249 YLTDLE------KKISSKVGLNISIKH 269
+ +LE +I +++ H
Sbjct: 241 GICNLETMCDVMNEIKKDDMTKVTLDH 267
>gi|168705613|ref|ZP_02737890.1| parB-like partition proteins [Gemmata obscuriglobus UQM 2246]
Length = 394
Score = 43.5 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 96/274 (35%), Gaps = 33/274 (12%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
PE + + + ++ P P N R +F+ L L SI++ G+ +PL+
Sbjct: 18 PAPERAPVGPPATFGPEIVEDVPLAAVAPCPFNVRRHFDPADLASLADSIRALGLKEPLL 77
Query: 81 VRAIDN------------------GLYKIIAGERRFRAAKMASL-----------SEVPV 111
VR + Y++ GERRFRA + +EVPV
Sbjct: 78 VRPVGRAGGPAPEWNGYSWIYLGEPAYELADGERRFRALALIHQAGGDIGKAPRPNEVPV 137
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
I+R + +++ + +V Q +DL E GY L Q +HV
Sbjct: 138 IVRPMTDEAVRAVMLVSREQSRDLRTSELVAGYTALAEGRTVEQLAEFLGRKNEIAHVRG 197
Query: 172 ILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
+L++ +LP I ++ A + S + + +E V
Sbjct: 198 VLKLARLPGWALAAIDAGKLKPASAVLVAGLHSEPSRKRAAACAILGFHHADEEVDAFIA 257
Query: 232 KKEKRKKIFEGSREKEKY----LTDLEKKISSKV 261
R + + + +L+ ++S+
Sbjct: 258 DHFDRGEDPTELEDWDYDGPLTYRELKDLLASEF 291
>gi|186471931|ref|YP_001863249.1| parB-like partition protein [Burkholderia phymatum STM815]
gi|184198240|gb|ACC76203.1| parB-like partition protein [Burkholderia phymatum STM815]
Length = 321
Score = 43.5 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 4/162 (2%)
Query: 18 IGEVNQSIDSPEKKTETIPESQ--DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
+ E + + E + + + + +I + R F E +L I G
Sbjct: 43 MRESSDRVSQLEAQLKEYDGAVPIRALDPKTIQASKWANRQDFGDESFAELKSLIAEAGG 102
Query: 76 IQPLIV--RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
I + D Y+I+ G RR RA L ++ R + + EN RK
Sbjct: 103 NTQPIKVRPSNDGDGYEIVFGHRRHRACLELDLPVNAIVDREITEQGQFVQMDQENRARK 162
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
+L+P E+ + Y++ + + + + + + +
Sbjct: 163 NLSPWEQGVWYKRALDDQLWPSQNAMAKACGLSQGNISSALL 204
>gi|116006740|ref|YP_787924.1| KorB [Bordetella pertussis]
gi|115500047|dbj|BAF33443.1| KorB [Bordetella pertussis]
Length = 349
Score = 43.5 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 81/232 (34%), Gaps = 11/232 (4%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDLCQSIKSHGIIQPLIVR 82
+ + + + I +P+ PR F E + ++ ++IK+ G+ P+ VR
Sbjct: 33 NEQPAANAGGAGPQELPLDLIDEDPNQPRTKDNPGFSPESIAEIGETIKARGVKSPISVR 92
Query: 83 AID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
G Y I G RR+R +K A + +P I + E V +++ E
Sbjct: 93 ENPDVPGRYLINHGARRYRGSKWAGKTTIPAFI----DNDYNEADQVIENLQRNELTPRE 148
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
+ G + +I +GKS + V + +L LP + E +
Sbjct: 149 IADFIGRELAKGKKKGEIAKEIGKSPAFVTQHVTLLDLPEPIAEAFNSGRGKDVTVINEL 208
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
T+ + +V ++ + + K +++ D
Sbjct: 209 VTAYKKNPEEVAAWLADDTQELTRGSVKLLREF-LEDKRSREDGDRDPNTVD 259
>gi|163747279|ref|ZP_02154633.1| putative plasmid stabilisation protein [Oceanibulbus indolifex
HEL-45]
gi|161379389|gb|EDQ03804.1| putative plasmid stabilisation protein [Oceanibulbus indolifex
HEL-45]
Length = 726
Score = 43.5 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 13/214 (6%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FE 59
M+ + +K ++ + V + + I + + + N R
Sbjct: 1 MAKSQTKAKITK------PPVATKTADAATTAIAMTQDLRMIPLDQLELSQLNVRKVAAS 54
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL-----SEVPVIIR 114
+ +L SI+ +GI Q L+V + +G + + AG RR +A K ++ ++ PV
Sbjct: 55 ATDDAELLASIRENGIKQNLVVHVLPDGKFAVDAGGRRLKALKQLAIDGIIPNDHPVSCL 114
Query: 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR 174
D ++++ + EN+QR ++P ++ + Q+I+E + G S V L+
Sbjct: 115 VEDEQNAIVTSTTENLQRAAMHPADQFEAFAQMIAEGRKEDDIALK-FGVSVDLVRRRLK 173
Query: 175 ILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
+ ++ + E R E++L T D
Sbjct: 174 LARIAPELIEQFRAGELTLECVMAFTLTDDHDRQ 207
>gi|238028979|ref|YP_002913204.1| Chromosome partitioning protein ParB [Burkholderia glumae BGR1]
gi|237880556|gb|ACR32884.1| Chromosome partitioning protein ParB [Burkholderia glumae BGR1]
Length = 340
Score = 43.5 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 55/305 (18%), Positives = 113/305 (37%), Gaps = 31/305 (10%)
Query: 11 GRGLAALIGEVNQSIDSPE----------KKTETIPESQDCISIHSIVPNPHNPRNYFES 60
GR +L+ E +D+ + ++ + I I NP N R ++
Sbjct: 37 GR--ESLLSEQPPVLDARQGGPDFYVETLEREGKVKTVTTKWPIDMIDDNPLNSRRIYDD 94
Query: 61 EGLEDLCQSIKSHGIIQPLIV--RAIDNGLYKIIAGERRFRAAKMASLSEVPVII-RNVD 117
++ SI G + P + D +I G+ R RA +E+ V I ++
Sbjct: 95 AKVKARANSIAKDGQMLPALAARHPSDPKKLILIDGQYRKRARIFLKHTELDVKILDGLE 154
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQ-LISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+A N +R+ + L+ A Y + L + Q + +VG+S+ V L +L
Sbjct: 155 PIDFWRLARTANSEREQESALDAAYAYRRLLDEGHAPDQERLALLVGESKGVVNKHLALL 214
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
LP S +++ G ++ + ++L + V + V + K
Sbjct: 215 DLPESALDLMATHPDLFG-----INMAYEITLYRKAVQDEDRTLQLIHRVITEQLSFRKV 269
Query: 237 KKIFEGSREKEKYLTDLEKKIS------SKVGLNISIKHRNNKGQFCIKYETNEQLKIIC 290
+ I + ++ + ++ + +G IK ++ G+ I +Q++
Sbjct: 270 EAIRKALQKGPRQRNPTARQFKYTRPDGTSIGT---IKEWDD-GRIQIDLNLGDQVERFR 325
Query: 291 SLLGE 295
L E
Sbjct: 326 EALQE 330
>gi|45784|emb|CAA27598.1| unnamed protein product [Plasmid RK2]
Length = 115
Score = 43.5 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDL 66
G GL + IG+++ +D+P + + I +PH PR F E + ++
Sbjct: 28 GLGLDS-IGDLSSLLDAPAASQ--GGSGPIELDLDLIDEDPHQPRTADNPGFSPESIAEI 84
Query: 67 CQSIKSHGIIQPL 79
+IK G+ P+
Sbjct: 85 GATIKERGVKSPI 97
>gi|94968123|ref|YP_590171.1| parB-like partition proteins [Candidatus Koribacter versatilis
Ellin345]
gi|94550173|gb|ABF40097.1| parB-like partition protein [Candidatus Koribacter versatilis
Ellin345]
Length = 321
Score = 43.5 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG-LYKIIAGER 96
+ + + + PNPHNPR F+ E L L +SIK GI+ PL V Y I+ G+R
Sbjct: 14 GVNTLPMDGVKPNPHNPRMLFDREDLHILRESIKRVGILVPLTVYRETRSGDYVILDGQR 73
Query: 97 RFRAAKMASLSEVPVIIR-NVDNKSSLEIAIVENVQRKDLNPL 138
R+ A+ A L +PV ++ + RKD +
Sbjct: 74 RWICAQEAGLKTIPVNEVAEPTLVQNIVTMFQIHKLRKDWELM 116
>gi|268507173|ref|YP_003293972.1| predicted transcriptional regulator [Escherichia coli ETEC H10407]
gi|266265494|dbj|BAI49198.1| predicted transcriptional regulator [Escherichia coli ETEC H10407]
Length = 416
Score = 43.5 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 89/223 (39%), Gaps = 13/223 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCI--SIHSIVPNPHNPRNY- 57
MS SK + GR +S E + + + S++ +P N R
Sbjct: 1 MSVTESKAKTGR------KSSRKSSKEQETALSALLAQTKEVSVPLASLIKSPLNVRTVP 54
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVII 113
+ +E + +L +S+K G++Q L+V + Y + AG RR A+ + +
Sbjct: 55 YSAESVSELAESVKGVGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERGIIPADWPVR 114
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
V + A + + E + + +++ G T IG ++G S HV +L
Sbjct: 115 VKVIPQELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRML 174
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ L + + + ++ I+ H + L +D QV +
Sbjct: 175 KLADLAPVILDALAEDRITTEHCQALALENDTARQVQVFEAAC 217
>gi|222112719|ref|YP_002559306.1| plasmid stabilization protein [Agrobacterium radiobacter K84]
gi|221728496|gb|ACM31468.1| plasmid stabilization protein [Agrobacterium radiobacter K84]
Length = 664
Score = 43.5 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + E+ + + I + +VP+ N R + G+ +L SI++HG+IQ L
Sbjct: 7 STDAAKPVVEQIVPAVFTNIRHIPLSKLVPSAANVRRVNSTAGVSELADSIEAHGLIQNL 66
Query: 80 IVRA-IDNGLYKIIAGERRFRAAKMASLSEVP-----VIIRNVDNKSSLEIAIVENVQRK 133
VR ++++AG RR A ++ + + + +D++S EI++ EN QR+
Sbjct: 67 TVRKAKKGDKFEVVAGARRLAALRLLVKEGIYNKLVEIPCKVLDDESDAEISLAENTQRE 126
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
++ ++E LGY QL +E G T + I + G+S + V L++ L + + +R++E+++
Sbjct: 127 TMHIVDEILGYRQL-AENGMTPDTIAARFGQSVATVRQRLKLANLSPKILDAMREDELTI 185
Query: 194 GHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
A+ L + D V + R + L
Sbjct: 186 EQAKALAISDDHAEQESVWFERDHWSRQPQNL 217
>gi|52220900|ref|YP_086769.1| putative plasmid stabilization protein [Agrobacterium tumefaciens]
gi|41393782|gb|AAS02130.1| putative plasmid stabilization protein [Agrobacterium tumefaciens]
Length = 669
Score = 43.5 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + E+ + + I + +VP+ N R + G+ +L SI++HG+IQ L
Sbjct: 12 STDAAKPVVEQIVPAVFTNIRHIPLSKLVPSAANVRRVNSTAGVSELADSIEAHGLIQNL 71
Query: 80 IVRA-IDNGLYKIIAGERRFRAAKMASLSEVP-----VIIRNVDNKSSLEIAIVENVQRK 133
VR ++++AG RR A ++ + + + +D++S EI++ EN QR+
Sbjct: 72 TVRKAKKGDKFEVVAGARRLAALRLLVKEGIYNKLVEIPCKVLDDESDAEISLAENTQRE 131
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
++ ++E LGY QL +E G T + I + G+S + V L++ L + + +R++E+++
Sbjct: 132 TMHIVDEILGYRQL-AENGMTPDTIAARFGQSVATVRQRLKLANLSPKILDAMREDELTI 190
Query: 194 GHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
A+ L + D V + R + L
Sbjct: 191 EQAKALAISDDHAEQESVWFERDHWSRQPQNL 222
>gi|253723657|ref|YP_003023943.1| KorB transcriptional represspr protein [Photobacterium damselae
subsp. piscicida]
gi|251752721|dbj|BAH83594.1| KorB transcriptional represspr protein [Photobacterium damselae
subsp. piscicida]
Length = 332
Score = 43.1 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDL 66
G GL IG+++ ++ PE +S+ I +P+ PR F + L +L
Sbjct: 10 GLGLED-IGDLSGLLNEPESNN--GGSGPLMLSLDLIDEDPNQPRKDDSPGFSKDSLGEL 66
Query: 67 CQSIKSHGIIQPLIVRAI--DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+I+ G+ P+ VR G Y I G RR RA+K+A +P I N N++ I
Sbjct: 67 AATIRHRGVKTPISVRENLEQPGRYIINHGARRTRASKIAGKDVIPGFIDNDYNEADQVI 126
Query: 125 AIVENVQ 131
++
Sbjct: 127 ENLQRND 133
>gi|331643219|ref|ZP_08344351.1| conserved hypothetical protein [Escherichia coli H736]
gi|331037446|gb|EGI09669.1| conserved hypothetical protein [Escherichia coli H736]
Length = 684
Score = 43.1 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ E + + + S++ +P N R + +E + +L +SI+
Sbjct: 58 LSALLAETAE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIQG 101
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L + V + A +
Sbjct: 102 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 161
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 162 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 221
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 222 DRITTEHCQALALENDTARQVQVFEAAC 249
>gi|324018569|gb|EGB87788.1| ParB-like partition protein [Escherichia coli MS 117-3]
Length = 426
Score = 43.1 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ E + + + S++ +P N R + +E + +L +SIK
Sbjct: 26 LSALLAETAE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALDNDTERQVQVFEAAC 217
>gi|307139233|ref|ZP_07498589.1| ParB-like partition protein [Escherichia coli H736]
Length = 652
Score = 43.1 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ E + + + S++ +P N R + +E + +L +SI+
Sbjct: 26 LSALLAETAE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIQG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|331652607|ref|ZP_08353618.1| conserved hypothetical protein [Escherichia coli M718]
gi|331049713|gb|EGI21779.1| conserved hypothetical protein [Escherichia coli M718]
Length = 684
Score = 43.1 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ E + + + S++ +P N R + +E + +L +SIK
Sbjct: 58 LSALLAETAE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 101
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L + V + A +
Sbjct: 102 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 161
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 162 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 221
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 222 DRITTEHCQALALENDTERQVQVFEAAC 249
>gi|169546538|ref|YP_001711977.1| hypothetical protein pVM01_p128 [Escherichia coli]
gi|168831090|gb|ACA34871.1| unknown [Escherichia coli]
Length = 652
Score = 43.1 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ E + + + S++ +P N R + +E + +L +SIK
Sbjct: 26 LSALLAETAE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTERQVQVFEAAC 217
>gi|89885898|ref|YP_516096.1| parB-like partition proteins [Rhodoferax ferrireducens T118]
gi|89347896|gb|ABD72098.1| ParB family protein [Rhodoferax ferrireducens T118]
Length = 580
Score = 43.1 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Query: 38 SQDCISIHSIVPNPHNP-RNYFESEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAG 94
+ I++ + +NP R + + +D S+KS G++Q ++ R + Y+++AG
Sbjct: 5 TIAGIALRDLHVPSYNPRRKVHDDQDWQDFKDSLKSKGVLQAILARPVQGKKTPYEVVAG 64
Query: 95 ERRFRAA--KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
+RRF + ++P +I+ + ++ + + EN+QR+ ++P EEA + ++
Sbjct: 65 QRRFLGSLEVFGQDYQIPALIKVMTDEEAEAASAAENLQREPMSPAEEAEAAARELARCN 124
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI 212
+ + + SR + N L+++ VR+ + + + LG A L + V
Sbjct: 125 GDREETAKRMNMSRLKLDNRLKLMACSPLVRQRLIERRLKLGVAEMLSGLTMVKQDELVS 184
Query: 213 VSKKMSVRDTEELVQEQDN 231
K+ + E++ +
Sbjct: 185 QFDKIGIPSIEDVSAMILS 203
>gi|259414872|ref|ZP_05738795.1| ParB domain protein nuclease [Silicibacter sp. TrichCH4B]
gi|259349323|gb|EEW61070.1| ParB domain protein nuclease [Silicibacter sp. TrichCH4B]
Length = 618
Score = 43.1 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 59/282 (20%), Positives = 103/282 (36%), Gaps = 25/282 (8%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K I S+ + S+ +P NPR + +L S+ S G+IQ + + D G
Sbjct: 2 TKQSKITASEARFPLASLSLSPLNPRQNVPENEVIELADSLWSAGLIQNISGQLTDEGGA 61
Query: 90 KIIAGERRFRAAKM-----------ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+I+AG RR RA + P++ D ++ A EN+ RK L P
Sbjct: 62 EIVAGGRRLRALQYLAGKHPDLEAKRPDLANPLVNLAPDCATAEAWANTENIARKALEPA 121
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
+E Y +S G T +I + HV L + KLP +V + + K EI+L A
Sbjct: 122 DEIRAY-GKMSANGATAGNIARAFAVTEKHVYRRLALSKLPEAVLDALAKGEINLSAAAC 180
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
+ D +V+ + ++ ++ + E+ +I
Sbjct: 181 FTISDDEEHSIEVLNEVRDRSHVSDHTIKTMLKPNSIKGTDRRAKFVGEEAYKAAGGRIG 240
Query: 259 SKVGLNISIKHRNNKGQFCIKYETNEQLKII-CSLLGENDFE 299
+ I++ ++ E L + L E
Sbjct: 241 GDLFSEITL------------FDDPELLDKLFLEKLEATSEE 270
>gi|254513177|ref|ZP_05125242.1| ParB domain protein nuclease [Rhodobacteraceae bacterium KLH11]
gi|221532181|gb|EEE35177.1| ParB domain protein nuclease [Rhodobacteraceae bacterium KLH11]
Length = 597
Score = 43.1 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 93/265 (35%), Gaps = 32/265 (12%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
K I ++ + + +P NPR + +L +SI + G+IQ + A D G
Sbjct: 2 TKQTKITATEARFPLALLTLSPINPRQTVPEAEIVELAESIWTVGLIQSIAGLADDKGGA 61
Query: 90 KIIAG-----------ERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+I+AG E+ A + P+++ D +++ A EN+ RK+L P
Sbjct: 62 EIVAGGRRLRALQYLAEKHDNLASIRPELANPLVMIAPDVETAETWANAENITRKNLTPA 121
Query: 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
EE Y + + G I + +HV L++ LP V + + EISLG A
Sbjct: 122 EEIRAY-GKMDKAGAPAIGIARAFAVTEAHVHKRLKLAGLPEQVIDALDAREISLGEAAA 180
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK---------- 248
D + V+ + + +E +
Sbjct: 181 FTICDDADLILPVLERARKGYISEYHIKKELKPDAVSATDRRAKFVTLDTYKQAGGRVSA 240
Query: 249 ----------YLTDLEKKISSKVGL 263
L LE+ S K+
Sbjct: 241 DLFQEKTLLDDLAILEQCFSEKLTT 265
>gi|325980839|ref|YP_004293242.1| parB-like partition protein [Nitrosomonas sp. AL212]
gi|325533344|gb|ADZ28063.1| parB-like partition protein [Nitrosomonas sp. AL212]
Length = 354
Score = 43.1 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 78/239 (32%), Gaps = 5/239 (2%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
S E I + I+ + PR F++ L +L ++IK G+ P+ VR +
Sbjct: 8 SEETNKAPDVLGASQIPLDLIIEDITQPRKIFDATSLAELTETIKLRGVKTPISVRPNPD 67
Query: 87 GL--YKIIAGERRFRAAKMASLSEVPVII---RNVDNKSSLEIAIVENVQRKDLNPLEEA 141
Y I G RR+RA+K A L +P I ++ ++ + R+ ++ +
Sbjct: 68 KPGTYIINHGARRYRASKNAGLRSIPAYIDADYSLADQVVENLQRDNLTSREIVDYIGRE 127
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
+ + + G S V + + I +L +S +L
Sbjct: 128 IAAGKTHEQIGKFIGKSASYVSLHAAAMDLPDPIAELFNSGNLTDIAAIFNLKKIFKNYP 187
Query: 202 TSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
L + + + EK + +LE K K
Sbjct: 188 LELVDWLKYSRPEDITRSKIQQFRKFLESKFDEKSIADELTRQAPYPVTDNLETKAEKK 246
>gi|238023503|ref|YP_002907735.1| hypothetical protein bglu_2g00020 [Burkholderia glumae BGR1]
gi|237878168|gb|ACR30500.1| Hypothetical protein bglu_2g00020 [Burkholderia glumae BGR1]
Length = 349
Score = 42.7 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 75/190 (39%), Gaps = 4/190 (2%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ + + P + + +I +P NPR+++ + +L ++ G Q +
Sbjct: 64 DESAQYHAWRIANRYQPGQIIELPLKAIKASPFNPRHFYLKSSIAELAVNLAKQGQQQAI 123
Query: 80 --IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLN 136
I + G + + G RR RA K A+ V I+ ++ S ++ NVQR
Sbjct: 124 HVIPDYENPGTFFVSDGGRRVRALKEANKESVKAIVVDIPIGIESYKLGYDLNVQRDSQT 183
Query: 137 PLEEALGYEQL-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ A+ + + +Y +Q ++ +G S +A L I KLP +V + + G
Sbjct: 184 VFDNAVVWRRFLEEKYFQSQKELAEHLGIDESTIAVALSIGKLPEAVMQEMVTRTDRFGS 243
Query: 196 ARTLVSTSDP 205
Sbjct: 244 NMAYQVGRYH 253
>gi|116687250|ref|YP_840496.1| parB-like partition proteins [Burkholderia cenocepacia HI2424]
gi|116652965|gb|ABK13603.1| parB-like partition protein [Burkholderia cenocepacia HI2424]
Length = 290
Score = 42.7 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 50/263 (19%), Positives = 97/263 (36%), Gaps = 9/263 (3%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ S + T+ + I I N NPR + + + ++ +S+ + G Q
Sbjct: 15 EVGSSQGATKYEIGQTYEVQIGKIKSNSVNPRAIYTASAVSEMAESLTARGQGQSASAYV 74
Query: 84 IDNGLYKIIAGERRFRAAKMASLS--EVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
+ G +I GERR R A+ A L V + + + E A NV+RKD +PL++A
Sbjct: 75 DEAGDIVLIDGERRLRGARAAGLPTLRVEIRPKPASERELYEEARAANVERKDQSPLDDA 134
Query: 142 LGYEQLISEYGYTQN-DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
L +++L+S Y + + HV+ L + +LPS + + + L
Sbjct: 135 LKWKELLSRKIYPTQVALAKALNLGEDHVSRTLSLAQLPSRIVQAAAEYPELLSLKMLNA 194
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
+ + + + + K R + +++S +
Sbjct: 195 IREFWEVKGEEETLELVFDAAKTGIGYRDVAARRKAAAKGTVKRPRSTR-----EQLSFR 249
Query: 261 VGLNISIKHRNNKGQFCIKYETN 283
G K G+ +K +
Sbjct: 250 -GAKGEFKSFEEDGRIELKLKGL 271
>gi|302595314|ref|YP_003829029.1| parB-like partitioning protein [Escherichia coli]
gi|302310050|gb|ADL13923.1| ParB [Escherichia coli]
Length = 686
Score = 42.7 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ E + + + S++ +P N R + +E + +L +SIK
Sbjct: 58 LSALLAETAE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 101
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L + V + A +
Sbjct: 102 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 161
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 162 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 221
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 222 DRITTEHCQALALENDTARQVQVFEAAC 249
>gi|120537016|ref|YP_957074.1| parB-like partition protein [Marinobacter aquaeolei VT8]
gi|120326850|gb|ABM21159.1| parB-like partition protein [Marinobacter aquaeolei VT8]
Length = 607
Score = 42.7 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 89/180 (49%), Gaps = 4/180 (2%)
Query: 25 IDSPEKKTETIPESQDCISIHSIV-PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+ E I+ I HNPR + DL +SI+ G+IQP++VR
Sbjct: 11 STKAQAPVTEQAEEASIIATDRIHKREGHNPRRIRSKSKMSDLRESIRDKGVIQPILVRP 70
Query: 84 IDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
Y+++AGE R ++ +E+P +I+++ ++ L+ A EN+QR D++P++
Sbjct: 71 HPQIDGEYELVAGETRLLLSREVGRTEIPALIKHLTDEEMLDYAATENIQRIDMSPVDAG 130
Query: 142 LGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVS 201
L Q + G + ++ I+G + + +++ V + + E+I+LGHA+ L S
Sbjct: 131 L-AAQALLAQGKDKEEVCRIMGWTPAFFDGRIQLTHCCDEVSQALVDEKIALGHAQLLSS 189
>gi|209883178|ref|YP_002287035.1| ParB domain protein nuclease [Oligotropha carboxidovorans OM5]
gi|209871374|gb|ACI91170.1| ParB domain protein nuclease [Oligotropha carboxidovorans OM5]
Length = 697
Score = 42.7 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 79/220 (35%), Gaps = 12/220 (5%)
Query: 25 IDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKSHGIIQPLIVRA 83
+ + T I ++ + +P N R +E SI + GI+Q L+V
Sbjct: 2 TTNAKTATVPENGETVFIPLNKLKKHPKNARKTPHSEASIEAKAASIAAKGILQNLVVEP 61
Query: 84 ------IDNGLYKIIAGERRF-----RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
G Y + GE R R + P+ + EI++ ENV R
Sbjct: 62 ELDGEGEPTGCYLVSIGEGRRLAQMLRVKRKKIKKTEPIRCVIDTANDAAEISLDENVTR 121
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
++L+P +E + +L G+ +I + G + V LR+ + + ++ R E++
Sbjct: 122 ENLHPADEFERFRELAENRGWGAEEIAARFGVTAHVVKQRLRLGAVSPKLMQVYRDGELT 181
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNK 232
L T D QV + + +
Sbjct: 182 LDQLMAFAITEDHARQEQVYANLSWNRDASTIRRDLTKAN 221
>gi|302595386|ref|YP_003829248.1| ParB-like partitioning protein [Escherichia coli]
gi|302595505|ref|YP_003829123.1| ParB-like partitioning protein [Escherichia coli]
gi|302310146|gb|ADL14017.1| ParB [Escherichia coli]
gi|302310274|gb|ADL14142.1| ParB [Escherichia coli]
Length = 678
Score = 42.7 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 52 LSALLAQTEE----------------VSVPLDSLIKSPLNVRTVPYSAESVSELADSIKG 95
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ + + + + A +
Sbjct: 96 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERDIIPADWPVRVKIIPQELATAASMT 155
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 156 ENGHRRDMHPAEQIAGFRAMAQEGKTPAHIGDLLGYSPRHVQRMLKLADLAPVILDALAE 215
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 216 DRITTEHCQALALENDTARQVQVFEAAC 243
>gi|170650892|ref|YP_001739942.1| ParB-like partition protein [Escherichia coli SMS-3-5]
gi|256367733|ref|YP_003108290.1| ParB [Escherichia coli]
gi|301329998|ref|ZP_07222686.1| ParB-like partition protein [Escherichia coli MS 78-1]
gi|310286510|ref|YP_003937771.1| DNA-binding protein involved in plasmid partitioning (ParB-like
partition protein) [Escherichia coli]
gi|170522168|gb|ACB20345.1| ParB-like partition protein [Escherichia coli SMS-3-5]
gi|228480670|gb|ACQ41997.1| ParB [Escherichia coli]
gi|300843971|gb|EFK71731.1| ParB-like partition protein [Escherichia coli MS 78-1]
gi|308826839|emb|CBX36112.1| putative DNA-binding protein involved in plasmid partitioning
(ParB-like partition protein) [Escherichia coli]
gi|325495798|gb|EGC93659.1| ParB-like partition protein [Escherichia fergusonii ECD227]
Length = 654
Score = 42.7 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 28 LSALLAQTEE----------------VSVPLDSLIKSPLNVRTVPYSAESVSELADSIKG 71
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ + + + + A +
Sbjct: 72 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERDIIPADWPVRVKIIPQELATAASMT 131
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 132 ENGHRRDMHPAEQIAGFRAMAQEGKTPAHIGDLLGYSPRHVQRMLKLADLAPVILDALAE 191
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 192 DRITTEHCQALALENDTARQVQVFEAAC 219
>gi|58383259|ref|YP_194829.1| hypothetical protein pU302L_022 [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|37962738|gb|AAR05685.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|315617927|gb|EFU98522.1| parB-like partition s domain protein [Escherichia coli 3431]
gi|315619252|gb|EFU99828.1| parB-like partition s domain protein [Escherichia coli 3431]
gi|327536669|gb|AEA95501.1| hypothetical protein pSD853_88_37 [Salmonella enterica subsp.
enterica serovar Dublin]
Length = 652
Score = 42.7 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLDSLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ + + + + A +
Sbjct: 70 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERDIIPADWPVRVKIIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAHIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|32470105|ref|NP_863048.1| hypothetical protein p165897_136 [Escherichia coli]
gi|28629362|gb|AAO49642.1| putative protein [Escherichia coli]
Length = 652
Score = 42.7 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLDSLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ + + + + A +
Sbjct: 70 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERDIIPADWPVRVKIIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAHIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|157418099|ref|YP_001481171.1| hypothetical protein APECO1_O1CoBM16 [Escherichia coli APEC O1]
gi|88770149|gb|ABD51586.1| conserved hypothetical protein [Escherichia coli APEC O1]
Length = 654
Score = 42.7 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 28 LSALLAQTEE----------------VSVPLDSLIKSPLNVRTVPYSAESVSELADSIKG 71
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ + + + + A +
Sbjct: 72 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERDIIPADWPVRVKIIPQELATAASMT 131
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 132 ENGHRRDMHPAEQIAGFRAMAQEGKTPAHIGDLLGYSPRHVQRMLKLADLAPVILDALAE 191
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 192 DRITTEHCQALALENDTARQVQVFEAAC 219
>gi|294023726|ref|YP_003547045.1| ParB-like protein [Sphingobium japonicum UT26S]
gi|292677506|dbj|BAI99022.1| ParB-like protein [Sphingobium japonicum UT26S]
Length = 676
Score = 42.7 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 69/190 (36%), Gaps = 8/190 (4%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAG 94
I + +P N R + L I + G++Q LI Y+I AG
Sbjct: 2 TEILYIPASKLSVSPLNVRKSQDPVADAQLRADIIARGVLQNLIGVPKARRKGHYEITAG 61
Query: 95 ERRFRAAK------MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
RR A+ V + D + E ++ EN QR ++P +E + +
Sbjct: 62 GRRLTQAQAAIAAGELPADYVIPVKPMADVGDAQEASLAENFQRLKMSPTDECIAFLHAT 121
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
G T ++ G + V +R+ KL V + +R +ISL A +TSD
Sbjct: 122 QRDGQTPAEVARRFGLTERFVLGRMRLAKLADVVFDALRDGKISLDIAMAYATTSDTARQ 181
Query: 209 AQVIVSKKMS 218
V
Sbjct: 182 QAVYEQLSRG 191
>gi|319794803|ref|YP_004156443.1| parb domain protein nuclease [Variovorax paradoxus EPS]
gi|315597266|gb|ADU38332.1| ParB domain protein nuclease [Variovorax paradoxus EPS]
Length = 347
Score = 42.4 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 37/114 (32%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNG 87
P + +VPNP NPR F+ E L DL Q+I HG++ PL V + +G
Sbjct: 8 PLDSKVQSAAELLTLPAQQLVPNPQNPRVLFDPEPLRDLKQNIALHGVLVPLTVFRLPDG 67
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEA 141
I R L E I + N E
Sbjct: 68 KRFGILDGARRHRCCSELLEEGIAIEIPCNIVVPPNKLAGLLYMFNIHNFREAW 121
>gi|313899339|ref|ZP_07832851.1| ParB-like protein [Clostridium sp. HGF2]
gi|312955865|gb|EFR37521.1| ParB-like protein [Clostridium sp. HGF2]
Length = 270
Score = 42.4 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 40/116 (34%), Gaps = 5/116 (4%)
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEG 242
R++ + + + + + ++ E L+ + + K K+
Sbjct: 155 RKLCERYLHLYRNLEQAGRKPKGQLRDWMAMKMSIGIKKAEALIHDIEGMKRKKSDETLK 214
Query: 243 SREK-EKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEND 297
REK + DL I + V + + + Y +E L+ + +LG +
Sbjct: 215 EREKLNLFREDLRTHIQNVVQTKVKVTSK----SVTFSYSGDEDLQRLLDVLGLGE 266
>gi|209916872|ref|YP_002291192.1| hypothetical protein ECSE_P2-0043 [Escherichia coli SE11]
gi|209915298|dbj|BAG80370.1| conserved hypothetical protein [Escherichia coli SE11]
Length = 654
Score = 42.4 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 13/223 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCI--SIHSIVPNPHNPRNY- 57
MS K + GR + E + + + + S++ +P N R
Sbjct: 1 MSVTEFKAKTGR------KSSRKPSKEQETALSALLAQTEEVSVPLASLIKSPLNVRTVP 54
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVII 113
+ +E + +L +SIK G++Q L+V + Y + AG RR A+ L+ +
Sbjct: 55 YSAESVSELAESIKGVGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERNILTADWPVR 114
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
V + A + + E + + +++ G T IG ++G S HV +L
Sbjct: 115 VKVIPQELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRML 174
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ L + + + ++ I+ H + L +D + QV +
Sbjct: 175 KLADLAPVILDALAEDRITTEHCQALALENDTVRQVQVFEAAC 217
>gi|255283303|ref|ZP_05347858.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
gi|255266157|gb|EET59362.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
Length = 284
Score = 42.4 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMA 104
+ P P NP + E E L +L +SIK GI+ P+I R ++G Y++IAG+RR RA+++A
Sbjct: 13 DLYPFPDNPFHVVEDEMLSELAESIKEFGIVTPIITRPKEDGNGYEVIAGQRRVRASELA 72
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
++ +P + +D ++ + N+QR+++ P E A Y+
Sbjct: 73 GINTIPAFVLPLDRDRAIITLVDSNLQRENILPSERAFAYKMKSEAMKRQ 122
>gi|291547579|emb|CBL20687.1| hypothetical protein CK1_27890 [Ruminococcus sp. SR1/5]
Length = 173
Score = 42.4 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
GE + E ES I I I P ++P + E +++L +S+K +
Sbjct: 6 GEKIKLASIDELLGVVNEESAMEIEISKIHPFKNHPFKVLDDEKMQELVESVKIN----G 61
Query: 79 LIVRAIDNGLYKIIAGER 96
++ + + E+
Sbjct: 62 VLAFMWEYMKVPENSREK 79
>gi|260751873|ref|YP_003237787.1| ParB-like nuclease [Escherichia coli O111:H- str. 11128]
gi|257767865|dbj|BAI39357.1| ParB-like nuclease [Escherichia coli O111:H- str. 11128]
gi|323181093|gb|EFZ66628.1| parB-like partition proteins domain protein [Escherichia coli 1180]
Length = 652
Score = 42.4 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLDSLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ + + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERDIIQADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEVAC 217
>gi|197104951|ref|YP_002130328.1| predicted transcriptional regulator [Phenylobacterium zucineum
HLK1]
gi|196478371|gb|ACG77899.1| predicted transcriptional regulator [Phenylobacterium zucineum
HLK1]
Length = 662
Score = 42.4 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 12/211 (5%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKSHGIIQP 78
+ + S I ++ + + N R +E L SI + G++Q
Sbjct: 4 QPAPRSKPMNAQAVIESGSVLDIPLNKLKKSSKNARKTPHGEAAIEALAASIAAKGLLQA 63
Query: 79 LIVRA------IDNGLYKIIAGERRF-----RAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
+V G Y + GE R RA + PV EI++
Sbjct: 64 PVVEPETGEDGEPTGFYLVTIGEGRRLALLLRAKRKEIRKTEPVRCVVDTANDPHEISLD 123
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
ENV R D++P ++ + +L E G + DIG+ G S V LR+ + + + R
Sbjct: 124 ENVTRTDMHPADQFEAFRRLSDERGLSAEDIGARFGVSAHVVRQRLRLGAVSPKLMAIYR 183
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMS 218
++ ++L + D QV +
Sbjct: 184 EDGLTLDQLMAFAVSEDHERQEQVYDQLSWN 214
>gi|182676878|ref|YP_001831025.1| nuclease [Beijerinckia indica subsp. indica ATCC 9039]
gi|182636508|gb|ACB97281.1| ParB domain protein nuclease [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 565
Score = 42.4 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 76/189 (40%), Gaps = 3/189 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLE-DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+ + + NPR E + L SI+ G++QP IV D GL+ + G+R
Sbjct: 5 ELREVDPRILKFDSDNPRRIAADECEDAQLIASIRIVGLLQPPIVYENDAGLFVKV-GKR 63
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R + A L+ + V++ D+ A +EN R ++ ++ E L ++ +T+
Sbjct: 64 RTLCSIAADLATIKVLVTEKDDDLDAMRAYMENAVRAPMSLIDTWRAIEAL-AKNNWTEQ 122
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
I + + V + + ++ + + + ++ +++ + A V +KK
Sbjct: 123 AIAHGLAMTVRDVKCLRLLGQVHPPMLDHMGHGDMPKESELKVIALASLDDQASVWKAKK 182
Query: 217 MSVRDTEEL 225
Sbjct: 183 PKKGQQAFW 191
>gi|331668067|ref|ZP_08368919.1| conserved hypothetical protein [Escherichia coli TA271]
gi|331064581|gb|EGI36488.1| conserved hypothetical protein [Escherichia coli TA271]
Length = 652
Score = 42.4 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ + + AG RR A+ L + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|58000349|ref|YP_190157.1| hypothetical protein O2R_60 [Escherichia coli]
gi|57903249|gb|AAW58879.1| conserved hypothetical protein [Escherichia coli]
Length = 652
Score = 42.4 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTERQVQVFEAAC 217
>gi|32455798|ref|NP_862450.1| KorB protein [Pseudomonas sp. ADP]
gi|13937435|gb|AAK50246.1|U66917_13 KorB protein [Pseudomonas sp. ADP]
Length = 349
Score = 42.4 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 10/170 (5%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDLCQSIKSHGIIQPLIVR 82
+ + + + I +PH PR F E + ++ ++IK+ G+ P+ VR
Sbjct: 33 NEQPAANAGGAGPQELPLDLIDEDPHQPRTADNPGFSPESIAEIGETIKARGVKSPISVR 92
Query: 83 AID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
G Y I G RR+R +K A + +P I + E V +++ E
Sbjct: 93 ENPDAPGRYLINHGARRYRGSKWAHKTTIPAFI----DNDYNEADQVIENLQRNELTARE 148
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
+ + G + +I +GKS + V + +L LP + E
Sbjct: 149 IVDFIGRELAKGKKKGEIAKEIGKSPAFVTQHVTLLDLPEPIAEAFNSGR 198
>gi|10955187|ref|NP_044216.1| KorB [Enterobacter aerogenes]
gi|6686302|sp|Q52313|KORB1_ECOLX RecName: Full=Transcriptional repressor protein korB
gi|7444177|pir||T08475 transcription repressor korB - Enterobacter aerogenes plasmid R751
gi|1572524|gb|AAC64419.1| KorB [Enterobacter aerogenes]
Length = 349
Score = 42.4 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 10/170 (5%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDLCQSIKSHGIIQPLIVR 82
+ + + + I +PH PR F E + ++ ++IK+ G+ P+ VR
Sbjct: 33 NEQPAANAGGAGPQELPLDLIDEDPHQPRTADNPGFSPESIAEIGETIKARGVKSPISVR 92
Query: 83 AID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
G Y I G RR+R +K A + +P I + E V +++ E
Sbjct: 93 ENPDAPGRYLINHGARRYRGSKWAHKTTIPAFI----DNDYNEADQVIENLQRNELTARE 148
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
+ G + +I +GKS + V + +L LP + E
Sbjct: 149 IADFIGRELAKGKKKGEIAKEIGKSPAFVTQHVTLLDLPEPIAEAFNSGR 198
>gi|31795155|ref|NP_858013.1| KorB protein [uncultured bacterium]
gi|34500537|ref|NP_904308.1| KorB [Delftia acidovorans]
gi|49176867|ref|YP_025369.1| transcriptional repressor [Ralstonia eutropha JMP134]
gi|55418054|ref|YP_133954.1| KorB DNA binding protein [Plasmid pB3]
gi|72384248|ref|YP_293601.1| ParB family protein [Ralstonia eutropha JMP134]
gi|77993270|ref|YP_358860.1| KorB protein [IncP-1beta multiresistance plasmid pB8]
gi|84310670|ref|YP_447000.1| KorB repressor and partitioning protein [uncultured bacterium]
gi|115345495|ref|YP_771680.1| parB-like partition proteins [Burkholderia ambifaria AMMD]
gi|319765084|ref|YP_004129020.1| parb-like partition protein [Alicycliphilus denitrificans BC]
gi|31746399|emb|CAD97524.1| KorB protein [uncultured bacterium]
gi|34013358|dbj|BAC82031.1| KorB [Delftia acidovorans]
gi|39777447|gb|AAR31022.1| transcriptional repressor [Ralstonia eutropha JMP134]
gi|54969608|emb|CAG26046.1| KorB DNA binding protein [Plasmid pB3]
gi|72123601|gb|AAZ65744.1| ParB-like partition protein [Ralstonia eutropha JMP134]
gi|77734023|emb|CAI10787.1| KorB protein [IncP-1beta multiresistance plasmid pB8]
gi|84094950|emb|CAJ15561.1| KorB repressor and partitioning protein [uncultured bacterium]
gi|115286672|gb|ABI92146.1| parB-like partition proteins [Burkholderia ambifaria AMMD]
gi|317119771|gb|ADV02258.1| parB-like partition protein [Alicycliphilus denitrificans BC]
Length = 349
Score = 42.0 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 10/170 (5%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDLCQSIKSHGIIQPLIVR 82
+ + + + I +PH PR F E + ++ ++IK+ G+ P+ VR
Sbjct: 33 NEQPAANAGGAGPQELPLDLIDEDPHQPRTADNPGFSPESIAEIGETIKARGVKSPISVR 92
Query: 83 AID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
G Y I G RR+R +K A + +P I + E V +++ E
Sbjct: 93 ENPDAPGRYLINHGARRYRGSKWAHKTTIPAFI----DNDYNEADQVIENLQRNELTARE 148
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
+ G + +I +GKS + V + +L LP + E
Sbjct: 149 IADFIGRELAKGKKKGEIAKEIGKSPAFVTQHVTLLDLPEPIAEAFNSGR 198
>gi|321271510|gb|ADW79599.1| hypothetical protein ND12IncI1_31 [Escherichia coli]
gi|332346569|gb|AEE59901.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 682
Score = 42.0 bits (96), Expect = 0.100, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SIK
Sbjct: 56 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 99
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L + + + A +
Sbjct: 100 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKIIPQELATAASMT 159
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T G ++G S HV +L++ L + + + +
Sbjct: 160 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQTGDLLGYSPRHVQRMLKLADLAPVILDALAE 219
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 220 DRITTEHCQALALENDTARQVQVFEAAC 247
>gi|194447038|ref|YP_002039096.1| ParB-like partition protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194358482|gb|ACF56926.1| ParB-like partition protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
Length = 654
Score = 42.0 bits (96), Expect = 0.100, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SIK
Sbjct: 28 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 71
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L + + + A +
Sbjct: 72 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKIIPQELATAASMT 131
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T G ++G S HV +L++ L + + + +
Sbjct: 132 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQTGDLLGYSPRHVQRMLKLADLAPVILDALAE 191
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 192 DRITTEHCQALALENDTARQVQVFEAAC 219
>gi|161617478|ref|YP_001591443.1| hypothetical protein SPAB_05337 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161366842|gb|ABX70610.1| hypothetical protein SPAB_05337 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 571
Score = 42.0 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 8/112 (7%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDC----ISIHSIVPNPHNPRN 56
MSN R L G A++ + + T T+ + + +++ + PNP NPR
Sbjct: 1 MSNV---RSLNLG-DAMLQRGKSPAQAADNNTPTVTQPVNEMAMVLTLDQLRPNPDNPRK 56
Query: 57 YFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
E P + R D I + R + L +
Sbjct: 57 GRNPRFEEIKASVRARGLDSIPKVTRDPDGDDVYIFSDGGNTRYQILCDLWQ 108
>gi|229582687|ref|YP_002841086.1| parB-like partition protein [Sulfolobus islandicus Y.N.15.51]
gi|228013403|gb|ACP49164.1| parB-like partition protein [Sulfolobus islandicus Y.N.15.51]
Length = 183
Score = 42.0 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Query: 42 ISIHSIVPN-PHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
I + SI+ N R + E + +L +S+K G++ P+IVR +G YKII G R+ A
Sbjct: 3 IPLDSIIINDKILARIKIDDEFVNELKESMKEIGLLTPIIVRPAKDGKYKIIDGLHRYAA 62
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
AK ++ I N+++ +L +I N+QRK ++P++EA +LI+ YG ++ D+
Sbjct: 63 AKKLGWKDIEANIVNLNDVDALVYSITNNIQRKQMDPIDEAQAILKLINNYGLSETDVAK 122
Query: 161 IVGKSRSHVANILRILKLPSSVREMI 186
+GKS + V+ + + + +
Sbjct: 123 KLGKSTAWVSQRIAVALKLPDEVKKL 148
>gi|260751955|ref|YP_003232493.1| ParB-like nuclease [Escherichia coli O26:H11 str. 11368]
gi|257757318|dbj|BAI28818.1| ParB-like nuclease [Escherichia coli O26:H11 str. 11368]
Length = 652
Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V + Y + AG RR A+ L+ + V + A +
Sbjct: 70 VGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERNILTADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D + QV +
Sbjct: 190 DRITTEHCQALALENDTVRQVQVFEAAC 217
>gi|209922010|ref|YP_002296083.1| hypothetical protein ECSE_P1-0058 [Escherichia coli SE11]
gi|209915188|dbj|BAG80261.1| conserved hypothetical protein [Escherichia coli SE11]
Length = 652
Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L+ + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILTADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMTQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|302531985|ref|ZP_07284327.1| predicted protein [Streptomyces sp. AA4]
gi|302440880|gb|EFL12696.1| predicted protein [Streptomyces sp. AA4]
Length = 317
Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 28/214 (13%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
++ +LG + + + T + I + PNP NPR+ +E
Sbjct: 1 MARVKLG------------TTEDHKLTTTAASDRLIAIPREQLQPNPENPRS--SDAEIE 46
Query: 65 DLCQSIKSHGIIQ--------------PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
+ ++++HG +Q P + + Y +I G RR AA +A L +
Sbjct: 47 ETAATLRNHGQLQNLNVMSRRAFLDQKPHLADQVTTARYVVINGCRRLEAAPLADLPALK 106
Query: 111 VIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVA 170
I + ++ ++ A++ + + + + + ++ + +GK + V
Sbjct: 107 CAIHDDWTENQIDEAMISENEHRKQLNPLLLGRHLKRMVPRYGSERALAKALGKQPAWVN 166
Query: 171 NILRILKLPSSVREMIRKEEISLGHARTLVSTSD 204
+ + + +L +++ + ++ I+ AR +
Sbjct: 167 HRVGLTRLHPDLQKEVEEDRITFKLARECPRLHE 200
>gi|331647367|ref|ZP_08348460.1| conserved hypothetical protein [Escherichia coli M605]
gi|331043773|gb|EGI15910.1| conserved hypothetical protein [Escherichia coli M605]
Length = 461
Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SIK
Sbjct: 46 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 89
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V + Y + AG RR A+ L+ + V + A +
Sbjct: 90 VGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERNILTADWPVRVKVIPQELATAASMT 149
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 150 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 209
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 210 DRITTEHCQALALENDTARQVQVFEAAC 237
>gi|152965728|ref|YP_001361512.1| parB-like partition protein [Kineococcus radiotolerans SRS30216]
gi|151360245|gb|ABS03248.1| parB-like partition protein [Kineococcus radiotolerans SRS30216]
Length = 334
Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 12/175 (6%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ + I + P+PHN R + + +L QSI G++QP++VR + +
Sbjct: 4 APRQELLTVPIEDVEPDPHNLRE--DVGDITELAQSIAETGLLQPVVVRRVHEVDERGDW 61
Query: 94 GE-------RRFRAAKMASLSEVPVIIRNVDNKSSLEI---AIVENVQRKDLNPLEEALG 143
R A + L + I D + E+ +VEN QR DL+P+EEA
Sbjct: 62 SHDRYVVVAGHRRLAALQHLGRGHIQILVRDEMAPDEVLAAMLVENGQRTDLDPIEEARA 121
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
+L +G + D+ + +GK ++ V+ L +L L +E IR ++ +
Sbjct: 122 MRKLADIHGLSHRDLAARIGKHQTAVSARLALLNLTKGEQESIRTGQMLIRDGVK 176
>gi|331674122|ref|ZP_08374883.1| conserved hypothetical protein [Escherichia coli TA280]
gi|331068764|gb|EGI40158.1| conserved hypothetical protein [Escherichia coli TA280]
Length = 655
Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 13/223 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCI--SIHSIVPNPHNPRNY- 57
MS K + GR +S E + + + + S++ +P N R
Sbjct: 1 MSVTEFKAKTGR------KSSRKSSKEQENALSALLAQTEEVSVPLASLIKSPLNVRTVP 54
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVII 113
+ +E + +L SIK G++Q L+V A+ Y + AG RR A+ L +
Sbjct: 55 YSAESVSELADSIKGVGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERGILPADWPVR 114
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
+ + A + ++ E + + +++ G T IG ++G S HV +L
Sbjct: 115 VKIIPQELATAASMTENGQRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRML 174
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ L + + + ++ I+ H + L +D QV +
Sbjct: 175 KLADLAPVILDALAEDRITTEHCQALALENDTARQVQVFEAAC 217
>gi|83310601|ref|YP_420865.1| transcriptional regulator [Magnetospirillum magneticum AMB-1]
gi|82945442|dbj|BAE50306.1| Predicted transcriptional regulator [Magnetospirillum magneticum
AMB-1]
Length = 744
Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI---------IQP 78
P + +P I P+P NPR + + L L S++ G+ Q
Sbjct: 60 PAQAPAVVPMGVSAAPHDRIAPSPLNPRQRIDEDELTKLVDSVRIEGVLLPLLVRYARQA 119
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI--------IRNVDNKSSLEIAIVENV 130
Y+IIAGERR++A + + I D+ LE+A+ ENV
Sbjct: 120 FTQPTDPRVEYEIIAGERRWQATRRLIDAGERPADTPLPIRLIDPCDDAKLLELALTENV 179
Query: 131 QRKDLNPLEEALGYE 145
RKD+ P EEA +E
Sbjct: 180 ARKDMTPWEEAEAFE 194
>gi|168705589|ref|ZP_02737866.1| parB-like partition proteins [Gemmata obscuriglobus UQM 2246]
Length = 167
Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ PE + + + ++ P P N R +F+ L L SI++ G+ +PL+
Sbjct: 18 PAPERAPVGPPATSGPEIVEDVPLAAVAPCPFNVRRHFDPADLASLADSIRALGLKEPLL 77
Query: 81 VRAIDN 86
VR +
Sbjct: 78 VRPVGR 83
>gi|194437900|ref|ZP_03069994.1| ParB-like partition protein [Escherichia coli 101-1]
gi|194423121|gb|EDX39114.1| ParB-like partition protein [Escherichia coli 101-1]
Length = 654
Score = 42.0 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SI+
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIRG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V + Y + AG RR A+ L+ + + + A +
Sbjct: 70 VGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERGILTADWPVRVKIIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + + + G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMVQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|228861739|ref|YP_788048.2| transcriptional regulators [Escherichia coli]
Length = 652
Score = 42.0 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V + Y + AG RR A+ L + V + A +
Sbjct: 70 VGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERGILPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|115500720|dbj|BAF33951.1| transcriptional regulators [Escherichia coli]
Length = 682
Score = 42.0 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SIK
Sbjct: 56 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 99
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V + Y + AG RR A+ L + V + A +
Sbjct: 100 VGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERGILPADWPVRVKVIPQELATAASMT 159
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 160 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 219
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 220 DRITTEHCQALALENDTARQVQVFEAAC 247
>gi|330819135|ref|YP_004347997.1| ParB [Burkholderia gladioli BSR3]
gi|327371130|gb|AEA62485.1| ParB [Burkholderia gladioli BSR3]
Length = 349
Score = 42.0 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 4/174 (2%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIA 93
P + + +I +P NPR+++ + +L ++ G Q + V + +
Sbjct: 80 PGQIIELPLKTIKASPFNPRHFYLKSSIAELAVNLAKQGQQQAIHVIPDYEHPGTFFVSD 139
Query: 94 GERRFRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLNPLEEALGYEQL-ISEY 151
G RR RA K A+ V I+ ++ S ++ NVQR + A+ + + ++
Sbjct: 140 GGRRVRALKEANKDSVKAIVIDIPIGIESYKLGYDLNVQRDSQTVFDNAVVWRRFLEDKF 199
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+Q ++ +G S +A L I KLP +V + + G
Sbjct: 200 FQSQKELAEHLGIDESTIAVALSIGKLPEAVMQEMVTRTDRFGSNMAYQVGRYH 253
>gi|163735696|ref|ZP_02143127.1| ParB-like nuclease [Roseobacter litoralis Och 149]
gi|161391124|gb|EDQ15462.1| ParB-like nuclease [Roseobacter litoralis Och 149]
Length = 618
Score = 42.0 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
+ + T S + + + ++ + NPR ++ L SI G+IQ L
Sbjct: 2 TKQDPIPTDTGSIELVPLDALTLSDLNPRKSVSDAHIDTLAASIARFGLIQNLAGLRTKK 61
Query: 87 GLYKIIAGERRFRA 100
G +I+AG R RA
Sbjct: 62 GRVEIVAGGCRLRA 75
>gi|15919967|ref|NP_361027.1| KorB protein [Plasmid pSB102]
gi|15722266|emb|CAC79158.1| KorB protein [Plasmid pSB102]
Length = 368
Score = 42.0 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 94/232 (40%), Gaps = 13/232 (5%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
L+AL + P + + P+P PR + E +E+L +IKS
Sbjct: 4 LSAL-------EEKPTAPGAEPTGKAMRAKLTDVEPDPGQPRTEKKQEEIEELGTNIKSR 56
Query: 74 GIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
G+ QP+ V+ + I GE R+ ++ A + ++P+++ + N +
Sbjct: 57 GVKQPISVKKHPTKPGKWLINDGELRYLSSLWAGVEDIPIVVDE---DFDDFDQVNANEK 113
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
R L P+E A+ ++ + E G + +I +GK S + +L ++ P ++ +
Sbjct: 114 RFALRPMELAVFIKRKLDE-GVKKAEIARRLGKPGSAITELLALVDAPQCIQVVYTSGRC 172
Query: 192 SLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ + +V + + T + V E + + +KK GS
Sbjct: 173 TSPKTLYELRALHDKFGEKVEAWCEAAEEITRKGVSELGDILKGKKKPAPGS 224
>gi|254674207|emb|CBA09991.1| hypothetical protein NMW_2439 [Neisseria meningitidis alpha275]
Length = 506
Score = 42.0 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 77/236 (32%), Gaps = 16/236 (6%)
Query: 1 MSNNYSKRRLGRGLAAL-IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + +K L +L IG Q+ S ++ + I I NPR +
Sbjct: 1 MNLDQNKATL-----SLHIGTPAQTNMSFGQEDTPSRGMLMSLPISEIDFFDKNPRRLHD 55
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL----------SEV 109
+ +SI+S GI QP+ V ++A R + L
Sbjct: 56 VSSYAAIKESIRSSGIQQPVHVTQRPGESKYVLAQGGNTRLKILCELLEETGDNRFRMMP 115
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
+ I D + +VEN R ++ ++A Y ++ + + + +
Sbjct: 116 CIYIHYSDETTLQVAHLVENELRAEMCFWDKACKYAEIRDIFQDESDSGKLSLRELEVMF 175
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
++ + + + + + + + + S S+ + +L
Sbjct: 176 SDKGLTVSHKTLGLFFFASDNLQELQEYAFKLSHAKVEEIKKLHSTLFSISKSIQL 231
>gi|169334088|ref|ZP_02861281.1| hypothetical protein ANASTE_00481 [Anaerofustis stercorihominis DSM
17244]
gi|169258805|gb|EDS72771.1| hypothetical protein ANASTE_00481 [Anaerofustis stercorihominis DSM
17244]
Length = 284
Score = 41.6 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKM 103
+ P P NP + E+E L +L +SIK GI+ P+I R ++G Y+IIAG+RR RA+++
Sbjct: 12 SDLYPFPDNPFHVVENEMLSELAESIKEFGIVTPIITRPKEDGDGYEIIAGQRRVRASEL 71
Query: 104 ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
A ++ +P + +D ++ + N+QR+++ P E A Y+
Sbjct: 72 AGINTIPAFVLPLDRDRAIITLVDSNLQRENILPSERAFAYKMKSEAMKRQ 122
>gi|300998441|ref|ZP_07181968.1| ParB-like partition protein [Escherichia coli MS 200-1]
gi|300304013|gb|EFJ58533.1| ParB-like partition protein [Escherichia coli MS 200-1]
Length = 635
Score = 41.6 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SIK
Sbjct: 9 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 52
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V + Y + AG RR A+ L + V + A +
Sbjct: 53 VGLLQNLVVHTLPGDRYAVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 112
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
++ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 113 ENGQRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 172
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 173 DRITTEHCQALALENDTARQVQVFEAAC 200
>gi|168770606|ref|ZP_02795613.1| ParB-like partition protein [Escherichia coli O157:H7 str. EC4486]
gi|189360562|gb|EDU78981.1| ParB-like partition protein [Escherichia coli O157:H7 str. EC4486]
Length = 652
Score = 41.6 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V + Y + AG RR A+ L + V + A +
Sbjct: 70 VGLLQNLVVHTLPGDRYAVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
++ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGQRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|85375753|ref|YP_459815.1| putative DNA-binding protein [Erythrobacter litoralis HTCC2594]
gi|84788836|gb|ABC65018.1| putative DNA-binding protein [Erythrobacter litoralis HTCC2594]
Length = 657
Score = 41.6 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 90/231 (38%), Gaps = 13/231 (5%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
I + +VP+P N R + L I + G++Q L+VR G +++ AG RR
Sbjct: 2 IQSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRRL 61
Query: 99 RAAKMA-------SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
A + +V ++ + E ++ EN QR +NP +EA + +I
Sbjct: 62 AALQALAEEGTLPKDHQVTCLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEAG 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
T D+ G + V LR+ L V E + + I+L A+ + SD A V
Sbjct: 122 A-TPEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTITLDMAKAYGAISDVERQAHV 180
Query: 212 IV--SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD---LEKKI 257
+ + + + + ++ YL +E+++
Sbjct: 181 YSELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIEREL 231
>gi|194430476|ref|ZP_03062954.1| conserved hypothetical protein [Escherichia coli B171]
gi|194411487|gb|EDX27831.1| conserved hypothetical protein [Escherichia coli B171]
Length = 655
Score = 41.6 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 13/223 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIH--SIVPNPHNPRNY- 57
MS K + GR ++ E + + +S+ S++ +P N R
Sbjct: 1 MSVTEFKVKAGR------KSSSKPSKVQETALSALLAQTEEVSVSLASLIKSPLNVRTVP 54
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVII 113
+ +E + +L +SI G++Q L+V A+ + + AG RR A+ L +
Sbjct: 55 YSAESVSELAESINGVGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGILPADWPVR 114
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
V + A + + E + + +++ G T IG ++G S HV +L
Sbjct: 115 VKVIPQELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRML 174
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ L + + + ++ I+ H + L +D QV +
Sbjct: 175 KLADLAPVILDALAEDRITTEHCQALALENDTARQVQVFEAAC 217
>gi|323974537|gb|EGB69662.1| ParB nuclease domain-containing protein [Escherichia coli TW10509]
Length = 654
Score = 41.6 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SIK
Sbjct: 28 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 71
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V + Y + AG RR A+ L+ + V + A +
Sbjct: 72 VGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERGILTADWPVRVKVIPQELATAASMT 131
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 132 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 191
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 192 DRITTEHCQALALENDTARQVQVFEAAC 219
>gi|254420466|ref|ZP_05034190.1| ParB-like nuclease domain family [Brevundimonas sp. BAL3]
gi|196186643|gb|EDX81619.1| ParB-like nuclease domain family [Brevundimonas sp. BAL3]
Length = 667
Score = 41.6 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 76/201 (37%), Gaps = 12/201 (5%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKSHGIIQP 78
+ T ++ + ++ + +P N R +E SIK+ G++QP
Sbjct: 2 TAQSIETVATEATTPAHGAEITVPLNRLKASPKNARKTPHSPATIEAFAASIKAKGVLQP 61
Query: 79 LIVRAI------DNGLYKIIAGERRFRAA-----KMASLSEVPVIIRNVDNKSSLEIAIV 127
+V G Y + GE R + + A PV + + EI++
Sbjct: 62 PVVEIERDGEGVPTGSYLVSIGEGRRQGLRLLAKRKAIKRTHPVRVIVDAENDAHEISLD 121
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
EN+ R+ ++P ++ +++L E GY +IG+ G S V LR+ + R
Sbjct: 122 ENMTREAMHPADQFEAFQRLAVEKGYGPEEIGARFGVSAHVVRQRLRLGSAAPELMAAYR 181
Query: 188 KEEISLGHARTLVSTSDPLSL 208
++L + D
Sbjct: 182 AGTLALDQLSAFCVSEDQDRQ 202
>gi|323161453|gb|EFZ47355.1| parB-like partition proteins domain protein [Escherichia coli
E128010]
Length = 652
Score = 41.6 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ L + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
++ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGQRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|152973543|ref|YP_001338594.1| parB-like nuclease domain-containing protein [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|150958335|gb|ABR80364.1| putative ParB-like nuclease domain [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 678
Score = 41.6 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 112/249 (44%), Gaps = 19/249 (7%)
Query: 2 SNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FES 60
+ SK+ L +S ++ K + + + ++V +P N R + +
Sbjct: 11 APKTSKKTL------------KSAEAEALKVALDAAQVEYVPVSALVKSPLNVRTIPYPA 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR-----AAKMASLSEVPVIIRN 115
E + + SI++ G++Q L+V + +G + AG RR + ++ + V+++
Sbjct: 59 EKVCSMADSIEAIGLLQNLVVHNLPDGRCGVAAGGRRLKALQLLQSENRIDAGYQVMVKK 118
Query: 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRI 175
V ++ ++ ++ EN Q+ ++P E+ G+ L +E G T IG ++G HV +L++
Sbjct: 119 VPDELAVAASMAENEQQMAMHPSEQIAGFRTL-AEQGKTPAQIGDLLGFGTRHVQRMLKL 177
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
+L + + K+EI+ H + L SD +V+ S + + E V N
Sbjct: 178 TELAPEILAALAKDEITTEHCQALALESDQKRQVEVLESARKRSWNNEVSVSSIRNLITS 237
Query: 236 RKKIFEGSR 244
+ G +
Sbjct: 238 EEVSTNGDK 246
>gi|116629260|ref|YP_814432.1| ParB-like nuclease domain-containing protein [Lactobacillus gasseri
ATCC 33323]
gi|116629320|ref|YP_814492.1| ParB-like nuclease domain-containing protein [Lactobacillus gasseri
ATCC 33323]
gi|116094842|gb|ABJ59994.1| ParB-like nuclease domain [Lactobacillus gasseri ATCC 33323]
gi|116094902|gb|ABJ60054.1| ParB-like nuclease domain [Lactobacillus gasseri ATCC 33323]
Length = 94
Score = 41.6 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ +SI+ I P +NPRN + ++ + SIK G QP++V IIAG R
Sbjct: 2 KVETVSINKIKPYENNPRN--NDDAVDAVANSIKEFGWQQPIVVDNGGV----IIAGHTR 55
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
++AAK EVP+++ + +
Sbjct: 56 YKAAKKLGYKEVPIVVADSFDYWQRFNNCE 85
>gi|251766732|ref|ZP_04819782.1| ParB family protein [Burkholderia mallei PRL-20]
gi|243064801|gb|EES46987.1| ParB family protein [Burkholderia mallei PRL-20]
Length = 268
Score = 41.6 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 86/211 (40%), Gaps = 4/211 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGERR 97
+ + +I P+P NPR+++ + +L ++ G Q + V + Y + G RR
Sbjct: 2 IELPLKAIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQAIHVIPDYDNPGSYFVSDGGRR 61
Query: 98 FRAAKMASLSEVPVIIRNVD-NKSSLEIAIVENVQRKDLNPLEEALGYEQL-ISEYGYTQ 155
RA K A+ V I+ ++ S ++ NVQR + A+ +++ +Y +Q
Sbjct: 62 VRALKEANKESVKAIVVDLPIGIQSYKLGYDLNVQRDSQTVFDNAIVWKRFLEEKYFQSQ 121
Query: 156 NDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSK 215
++ +G S VA L I KLP +V + + G + +
Sbjct: 122 KELAEHLGLDESTVAVALSIGKLPEAVMQEMVARPDRFGSNMAYQVGRYHAARGTDSTLR 181
Query: 216 KMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
++ +++L Q K + + S +
Sbjct: 182 LINKILSDDLSTRQVADIVKGRATTQESPKP 212
>gi|157149342|ref|YP_001451393.1| plasmid partition protein B [Escherichia coli E24377A]
gi|298155819|ref|YP_003717645.1| plasmid partition protein B [Escherichia coli ETEC 1392/75]
gi|157076509|gb|ABV16222.1| plasmid partition protein B [Escherichia coli E24377A]
gi|297374416|emb|CBL93477.1| plasmid partition protein B [Escherichia coli ETEC 1392/75]
Length = 654
Score = 41.6 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 46/223 (20%), Positives = 91/223 (40%), Gaps = 13/223 (5%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIH--SIVPNPHNPRNY- 57
MS K + GR ++ E + + +S+ S++ +P N R
Sbjct: 1 MSVTEFKVKAGR------KSSSKPSKVQETALSALLAQTEEVSVSLASLIKSPLNVRTVP 54
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVII 113
+ +E + +L +SIK G++Q L+V A+ + + AG RR A+ L +
Sbjct: 55 YSAESVSELAESIKGVGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGILPADWPVR 114
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
V + A + + E + + +++ G T IG ++G S HV +L
Sbjct: 115 VKVIPQELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRML 174
Query: 174 RILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
++ L + + + ++ I+ H + L +D QV +
Sbjct: 175 KLADLAPVILDALAEDRITTEHCQALALENDTARQVQVFEAAC 217
>gi|323974706|gb|EGB69821.1| ParB nuclease domain-containing protein [Escherichia coli TW10509]
Length = 654
Score = 41.6 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V Y + AG RR A+ + + V + A +
Sbjct: 70 VGLLQNLVVHTQPGDRYGVAAGGRRLAALNMLAERGIIPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|153011836|ref|YP_001373049.1| parB-like partition protein [Ochrobactrum anthropi ATCC 49188]
gi|151563724|gb|ABS17220.1| parB-like partition protein [Ochrobactrum anthropi ATCC 49188]
Length = 326
Score = 41.6 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 82/239 (34%), Gaps = 21/239 (8%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE----SEGLEDLCQSIKSHGIIQPL 79
+ K + I ++ I P+P R F+ + ++ +S++ G I P
Sbjct: 45 EREETFAKILKDGDHIIDIDVNDIAPSPIQDR--FDGSYEESAIAEIVESMRERGQIVPG 102
Query: 80 IVRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
+VR +D+ Y+I+ G RR+ AAK L VI + ++ ++ EN R+DL+
Sbjct: 103 LVRPLDDGTHHYQIVFGRRRWNAAKQLGLPFRAVIK-ELTDEQAIVFQGEENTNREDLSF 161
Query: 138 LEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHAR 197
LE+ L + + S+ + +P
Sbjct: 162 LEKCLFAHEQEAAGFRRDVICASLSTTKSHLSEMLRITTTVP------------KSTLLL 209
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ + + + LVQ+ + + K+ LT ++
Sbjct: 210 IGRAPDTGRRRWLEFCELWNARSNAQLLVQQALTSSPSDRFQAAVAALKQPDLTQATQE 268
>gi|327412957|emb|CAX67975.1| hypothetical protein S16_0032 [Salmonella enterica subsp. VII]
Length = 603
Score = 41.6 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%)
Query: 10 LGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQS 69
LG AL+ + +P E +++ + PNP NPR +++ +S
Sbjct: 9 LG---DALLQGAKEPSSAPAVPVLPTSEMPMVLTLDEVAPNPDNPRTTRNP-KYDEIKES 64
Query: 70 IKSHGIIQPLIVRAIDNGL--YKIIAGERRFRAAKMASLS 107
I++ G+ V + I + R A + L
Sbjct: 65 IRARGLDTVPKVTKNPDIPGSPYIFSDGGNTRYAILRELY 104
>gi|168699876|ref|ZP_02732153.1| ParB-like partition protein [Gemmata obscuriglobus UQM 2246]
Length = 735
Score = 41.2 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 96/274 (35%), Gaps = 33/274 (12%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
PE + + + ++ P P N R +F+ L L SI++ G+ +PL+
Sbjct: 18 PAPERPPVGPPATFGPEIVEDVPLAAVAPCPFNVRRHFDPADLASLADSIRALGLKEPLL 77
Query: 81 VRAIDN------------------GLYKIIAGERRFRAAKMASL-----------SEVPV 111
VR + Y++ GERRFRA + +E+PV
Sbjct: 78 VRPVGRAGGPAPEWNGYSWIYLGEPAYELADGERRFRALALIHQAGGDIGMAPRPNEIPV 137
Query: 112 IIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVAN 171
I+R + +++ + +V Q +DL E GY L Q +HV
Sbjct: 138 IVRPMTDEAVRAVMLVSREQSRDLRTSELVAGYTALAVGRTVEQLAEFLGRKNEIAHVRG 197
Query: 172 ILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDN 231
+L++ +LP I ++ A + S + + ++ V
Sbjct: 198 VLKLARLPEWALAAIDAGKLKPASAVLVAGLHSEPSRKRAAACAILGWHHPDDEVDALIA 257
Query: 232 KKEKRKKIFEGSREKEKY----LTDLEKKISSKV 261
R + + + + +L+ ++S
Sbjct: 258 DHFDRGEDPTEADDWDYDGPLTYRELKDLLASDF 291
>gi|124005321|ref|ZP_01690162.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123989143|gb|EAY28721.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 584
Score = 41.2 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 96/277 (34%), Gaps = 16/277 (5%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
+ EK + + + I +P N E + L I+ G
Sbjct: 6 STPNTSPESEKHLKIKKSQVVMVPVERIDVHPDNRPLGINEEKIAQLQILIQHDGFDSSH 65
Query: 80 -IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+V + + Y+++ GE RFRAAK E+P +IR +DN +L I N+Q +
Sbjct: 66 PLVVRLQDERYQLVEGEHRFRAAKALGYEELPCVIRVMDNTEALIQLITGNIQSDNKPLE 125
Query: 139 EEALGYEQLISEYGY--TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
+ + + + + +G S + + + + ++ + L
Sbjct: 126 IGLNALKVIQAANEQGLSVTNYAQRLGMSETSIRRYMHASEAFQFIQSQLPAGAYILEEV 185
Query: 197 RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
L + + ++ ++ + + ++ + K + + T + +K
Sbjct: 186 YKLEEIQRCAQTDWIWLHDLITEKELSKAQVIEISQAIRDIKTDNPAIYQFFDFTAIRQK 245
Query: 257 ISSKVGLNISIKHRNNKGQF------CIK--YETNEQ 285
I+ ++ I+ + + + YE ++
Sbjct: 246 IAREI-----IQGQKTAHRVYNDLLETFETSYENLDE 277
>gi|322509986|gb|ADX05439.1| Transcriptional repressor protein [Acinetobacter baumannii 1656-2]
Length = 418
Score = 41.2 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 14 LAALIGEVNQSIDS----PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQS 69
+++L+G++N S + + ++ + +P N R ++ + +++L +
Sbjct: 1 MSSLLGDLNAVDSSLTSANLNANNNSDRTILKLPLNRVKLDPQNVRLEYDQDYVKELANT 60
Query: 70 IKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
I G++QP+ VRA + + I +R L+ + + S + + EN
Sbjct: 61 ILRDGLLQPISVRADSDNPGEYIINMGHYRYLAHKHLNLDTIEATIDNKLGSRRVKMSEN 120
Query: 130 VQRKDLNPLEEALGYEQL 147
+ RKD++ LE A + +
Sbjct: 121 LFRKDMSLLEVATNLKLM 138
>gi|298378812|ref|ZP_06988694.1| ParB family chromosome partitioning protein [Escherichia coli
FVEC1302]
gi|298280421|gb|EFI21924.1| ParB family chromosome partitioning protein [Escherichia coli
FVEC1302]
Length = 654
Score = 41.2 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ + + AG RR A+ + + + + A +
Sbjct: 70 VGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGIIPADWPVRVKIIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFCAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DLITTEHCQALALENDTARQVQVFEAAC 217
>gi|237702564|ref|ZP_04533045.1| plasmid partition protein B [Escherichia sp. 3_2_53FAA]
gi|226903345|gb|EEH89604.1| plasmid partition protein B [Escherichia sp. 3_2_53FAA]
Length = 654
Score = 41.2 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ + + AG RR A+ + + + + A +
Sbjct: 70 VGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGIIPADWPVRVKIIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFCAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DLITTEHCQALALENDTARQVQVFEAAC 217
>gi|94992639|ref|YP_600738.1| chromosome partitioning protein parB [Streptococcus pyogenes
MGAS2096]
gi|94546147|gb|ABF36194.1| Chromosome partitioning protein parB [Streptococcus pyogenes
MGAS2096]
Length = 284
Score = 41.2 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMA 104
+ P P NP + E E L +L +SIK GI+ P+I R ++G Y++IAG+RR RA+++A
Sbjct: 13 DLYPFPDNPFHVVEDETLSELAESIKEFGIVTPIITRPKEDGNGYEVIAGQRRVRASELA 72
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
++ VP + +D ++ + N+QR+++ P E A Y+
Sbjct: 73 GINTVPAFVLPLDRDRAIITLVDSNLQRENILPSERAFAYKMKSEAMKRQ 122
>gi|323191635|gb|EFZ76892.1| parB-like partition proteins domain protein [Escherichia coli
RN587/1]
Length = 652
Score = 41.2 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTAE----------------VSVPLASLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ Y + AG RR A+ + + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERGIIPVDWPVRVKVIPQEMATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|194098594|ref|YP_002001656.1| ParB [Neisseria gonorrhoeae NCCP11945]
gi|193933884|gb|ACF29708.1| ParB [Neisseria gonorrhoeae NCCP11945]
Length = 496
Score = 41.2 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 77/236 (32%), Gaps = 16/236 (6%)
Query: 1 MSNNYSKRRLGRGLAAL-IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + +K L +L IG Q+ S ++ + I I NPR +
Sbjct: 1 MNLDQNKATL-----SLHIGTPAQTNMSFGQEDTPSRGMLMSLPISEIDFFDKNPRRLHD 55
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL----------SEV 109
+ +SI+S GI QP+ V ++A R + L
Sbjct: 56 VSSYAAIKESIRSSGIQQPVHVTQRPGESKYVLAQGGNTRLKILCELLEETGDNRFRMMP 115
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
+ I D + +VEN R ++ ++A Y ++ + + + +
Sbjct: 116 CIYIPYSDETTLQVAHLVENELRAEMCFWDKACKYAEIRDIFQDESDSGKLSLRELEVMF 175
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
++ + + + + + + + + S S+ + +L
Sbjct: 176 SDKGLTVSHKTLGLFFFASDNLQELQEYAFKLSHAKVEEIKKLHSTLFSISKSIQL 231
>gi|321271710|gb|ADW79797.1| hypothetical protein PWD4IncI1_41 [Escherichia coli]
Length = 682
Score = 41.2 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + E + +L +SIK
Sbjct: 56 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSVESVSELAESIKG 99
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V + Y + AG RR A+ L+ + V + A +
Sbjct: 100 VGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERGILTADWPVRVKVIPQELATAASMT 159
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T G ++G S HV +L++ L + + + +
Sbjct: 160 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQTGDLLGYSPRHVQRMLKLADLAPVILDALAE 219
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 220 DRITTEHCQALALENDTARQVQVFEAAC 247
>gi|193063045|ref|ZP_03044137.1| ParB-like partition protein [Escherichia coli E22]
gi|192931304|gb|EDV83906.1| ParB-like partition protein [Escherichia coli E22]
Length = 652
Score = 41.2 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + E + +L +SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSVESVSELAESIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V + Y + AG RR A+ L+ + V + A +
Sbjct: 70 VGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERGILTADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T G ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQTGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|240112888|ref|ZP_04727378.1| ParB [Neisseria gonorrhoeae MS11]
gi|268598972|ref|ZP_06133139.1| predicted protein [Neisseria gonorrhoeae MS11]
gi|58891428|gb|AAW83116.1| ParB [Neisseria gonorrhoeae]
gi|268583103|gb|EEZ47779.1| predicted protein [Neisseria gonorrhoeae MS11]
Length = 496
Score = 41.2 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 77/236 (32%), Gaps = 16/236 (6%)
Query: 1 MSNNYSKRRLGRGLAAL-IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + +K L +L IG Q+ S ++ + I I NPR +
Sbjct: 1 MNLDQNKATL-----SLHIGTPAQTNMSFGQEDTPSRGMLMSLPISEIDFFDKNPRRLHD 55
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL----------SEV 109
+ +SI+S GI QP+ V ++A R + L
Sbjct: 56 VSSYAAIKESIRSSGIQQPVHVTQRPGKSKYVLAQGGNTRLKILCELLEETGDNRFRMMP 115
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
+ I D + +VEN R ++ ++A Y ++ + + + +
Sbjct: 116 CIYIPYSDETTLQVAHLVENELRAEMCFWDKACKYAEIRDIFQDESDSGKLSLRELEVMF 175
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
++ + + + + + + + + S S+ + +L
Sbjct: 176 SDKGLTVSHKTLGLFFFASDNLQELQEYAFKLSHAKVEEIKKLHSTLFSISKSIQL 231
>gi|325522056|gb|EGD00728.1| parB-like partition protein [Burkholderia sp. TJI49]
Length = 284
Score = 41.2 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 80/215 (37%), Gaps = 6/215 (2%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL--YKIIAGE 95
I + +PNP+NPR +++S + +L +S S G ++ + V + + II G
Sbjct: 5 RPVRIRVADTIPNPYNPRVFYDSTTISNLAESFGSQGQLEAIKVTRLPEFPDKWVIIDGG 64
Query: 96 RRFRAAKMASL--SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGY 153
RR RAA + E +I ++ KS A N R + ++A +++L+ Y
Sbjct: 65 RRTRAAALRKDEFIEAEIIEEELEPKSLYLRAYHANKDRDEQTDFDDAYAWKKLLDAGVY 124
Query: 154 TQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIV 213
+ + + L + + + + A V
Sbjct: 125 RDQMELAAAVGRDPKHVSKVLQLTTLPTTLLEAMAKRADVVRLSHAYNLKLIYDRAGEAV 184
Query: 214 SKKM--SVRDTEELVQEQDNKKEKRKKIFEGSREK 246
+ + V + V++ + ++ K + R K
Sbjct: 185 AARWLKEVIEGTASVRKLEQVASEQSKGTDSKRSK 219
>gi|184160034|ref|YP_001840902.1| transcriptional regulator [Acinetobacter baumannii ACICU]
gi|301511176|ref|ZP_07236413.1| transcriptional regulator [Acinetobacter baumannii AB058]
gi|301594776|ref|ZP_07239784.1| transcriptional regulator [Acinetobacter baumannii AB059]
gi|183211628|gb|ACC59024.1| Predicted transcriptional regulator [Acinetobacter baumannii ACICU]
gi|323519974|gb|ADX94353.1| Predicted transcriptional regulator [Acinetobacter baumannii
TCDC-AB0715]
Length = 418
Score = 41.2 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 14 LAALIGEVNQSIDS----PEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQS 69
+++L+G++N S + + ++ + +P N R ++ + +++L +
Sbjct: 1 MSSLLGDLNAVDSSLTSANLNANNNSDRTILKLPLNRVKLDPQNVRLEYDQDYVKELANT 60
Query: 70 IKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
I G++QP+ VRA + + I +R L+ + + S + + EN
Sbjct: 61 ILRDGLLQPISVRADSDSPGEYIINMGHYRYLAHKHLNLDTIEATIDNKLGSRRVKMSEN 120
Query: 130 VQRKDLNPLEEALGYEQL 147
+ RKD++ LE A + +
Sbjct: 121 LFRKDMSLLEVATNLKLM 138
>gi|85372956|ref|YP_457018.1| hypothetical protein ELI_00645 [Erythrobacter litoralis HTCC2594]
gi|84786039|gb|ABC62221.1| hypothetical protein ELI_00645 [Erythrobacter litoralis HTCC2594]
Length = 663
Score = 41.2 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 13/231 (5%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
I + +VP+P N R + L I + G++Q L+VR G +++ AG RR
Sbjct: 2 IQSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRRL 61
Query: 99 RAAKM-------ASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
A + + EV ++ + E ++ EN QR +NP +EA + +I
Sbjct: 62 AALQALADEGTLSENHEVTCLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEAG 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
T D+ G + V LR+ L V E + + I+L A+ + SD A V
Sbjct: 122 A-TTEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTITLDMAKAYGAISDVERQAHV 180
Query: 212 IV--SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD---LEKKI 257
+ + + + + ++ YL +E+++
Sbjct: 181 YAELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIEREL 231
>gi|240080743|ref|ZP_04725286.1| ParB [Neisseria gonorrhoeae FA19]
gi|240115643|ref|ZP_04729705.1| ParB [Neisseria gonorrhoeae PID18]
gi|240123496|ref|ZP_04736452.1| ParB [Neisseria gonorrhoeae PID332]
gi|260440544|ref|ZP_05794360.1| ParB [Neisseria gonorrhoeae DGI2]
gi|268596862|ref|ZP_06131029.1| chromosome partitioning protein parB [Neisseria gonorrhoeae FA19]
gi|268601325|ref|ZP_06135492.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268682126|ref|ZP_06148988.1| predicted protein [Neisseria gonorrhoeae PID332]
gi|291043845|ref|ZP_06569561.1| chromosome partitioning protein parB [Neisseria gonorrhoeae DGI2]
gi|268550650|gb|EEZ45669.1| chromosome partitioning protein parB [Neisseria gonorrhoeae FA19]
gi|268585456|gb|EEZ50132.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268622410|gb|EEZ54810.1| predicted protein [Neisseria gonorrhoeae PID332]
gi|291012308|gb|EFE04297.1| chromosome partitioning protein parB [Neisseria gonorrhoeae DGI2]
Length = 506
Score = 41.2 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 77/236 (32%), Gaps = 16/236 (6%)
Query: 1 MSNNYSKRRLGRGLAAL-IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + +K L +L IG Q+ S ++ + I I NPR +
Sbjct: 1 MNLDQNKATL-----SLHIGTPAQTNMSFGQEDTPSRGMLMSLPISEIDFFDKNPRRLHD 55
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL----------SEV 109
+ +SI+S GI QP+ V ++A R + L
Sbjct: 56 VSSYAAIKESIRSSGIQQPVHVTQRPGESKYVLAQGGNTRLKILCELLEETGDNRFRMMP 115
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
+ I D + +VEN R ++ ++A Y ++ + + + +
Sbjct: 116 CIYIPYSDETTLQVAHLVENELRAEMCFWDKACKYAEIRDIFQDESDSGKLSLRELEVMF 175
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
++ + + + + + + + + S S+ + +L
Sbjct: 176 SDKGLTVSHKTLGLFFFASDNLQELQEYAFKLSHAKVEEIKKLHSTLFSISKSIQL 231
>gi|240128195|ref|ZP_04740856.1| ParB [Neisseria gonorrhoeae SK-93-1035]
gi|268686594|ref|ZP_06153456.1| predicted protein [Neisseria gonorrhoeae SK-93-1035]
gi|268626878|gb|EEZ59278.1| predicted protein [Neisseria gonorrhoeae SK-93-1035]
Length = 506
Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 77/236 (32%), Gaps = 16/236 (6%)
Query: 1 MSNNYSKRRLGRGLAAL-IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + +K L +L IG Q+ S ++ + I I NPR +
Sbjct: 1 MNLDQNKATL-----SLHIGTPAQTNMSFGQEDTPSRGMLMSLPISEIDFFDKNPRRLHD 55
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL----------SEV 109
+ +SI+S GI QP+ V ++A R + L
Sbjct: 56 VSSYAAIKESIRSSGIQQPVHVTQRPGKSKYVLAQGGNTRLKILCELLEETGDNRFRMMP 115
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
+ I D + +VEN R ++ ++A Y ++ + + + +
Sbjct: 116 CIYIPYSDETTLQVAHLVENELRAEMCFWDKACKYAEIRDIFQDESDSGKLSLRELEVMF 175
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
++ + + + + + + + + S S+ + +L
Sbjct: 176 SDKGLTVSHKTLGLFFFASDNLQELQEYAFKLSHAKVEEIKKLHSTLFSISKSIQL 231
>gi|238023298|ref|YP_002907531.1| hypothetical protein bglu_2p0020 [Burkholderia glumae BGR1]
gi|237880351|gb|ACR32681.1| Hypothetical protein bglu_2p0020 [Burkholderia glumae BGR1]
Length = 359
Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 101/263 (38%), Gaps = 17/263 (6%)
Query: 29 EKKTETIPESQDCISIHSIV--PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
E + I + + R + E +L ++++ + ++QP+IV +
Sbjct: 80 ELIAAKSTGTAIDIPVSELHEVAGR---RRFMPREKYVELRENLRHNPLVQPIIVLPRNE 136
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
G ++I +G R+ A K V ++ + S A N+ + DL E+ G +
Sbjct: 137 GGFEIQSGHHRWDAYKELGRRSVKCVLGDPTGSDSDIGAFNANLMQSDLTDYEKYKGLKL 196
Query: 147 L-ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDP 205
+ +Q + G ++ V+ ++ +LP + + + +T+
Sbjct: 197 ILSRYPEMSQAQLVERTGIPKASVSRLMSFGELPPTAIARLE------ELPSLMGATAGG 250
Query: 206 LSLAQVIVSKKMSVRDTEEL--VQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
A V K+ +V + EL + D + + + K + + E K+G
Sbjct: 251 KFAALVREGKEAAVVEAIELLATNKIDETQAVKLASRSTKQGKSEAVPKAETH-KFKIGK 309
Query: 264 NISIKHRNNKGQFC-IKYETNEQ 285
++ R G+ +++++ ++
Sbjct: 310 SVYCDMRM-TGKLVRLEFQSEDE 331
>gi|281355044|ref|ZP_06241538.1| ParB domain protein nuclease [Victivallis vadensis ATCC BAA-548]
gi|281317924|gb|EFB01944.1| ParB domain protein nuclease [Victivallis vadensis ATCC BAA-548]
Length = 177
Score = 41.2 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 1/139 (0%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPL 79
++ Q +P+ I + I N +NP N + L SI+ G QP+
Sbjct: 4 DLKQFETAPQWAFYHPVSQVYWIPVELIEANDYNP-NVVAPPEMRLLELSIRQDGFTQPI 62
Query: 80 IVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+V + ++++ G RF+ K L+ +P ++ N + + + +
Sbjct: 63 VVWLRQDERFEVVDGFHRFQVGKKLGLTHLPCVVVNRHEQDRNDRIASTVRHNRARGKHQ 122
Query: 140 EALGYEQLISEYGYTQNDI 158
+ ++ +D
Sbjct: 123 IQEMSKIVLELKRRNWSDA 141
>gi|293420955|ref|ZP_06661389.1| predicted protein [Escherichia coli B088]
gi|291324825|gb|EFE64241.1| predicted protein [Escherichia coli B088]
Length = 336
Score = 41.2 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESISELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ + + AG RR A+ + + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGIIPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALSLENDTARQVQVFEAAC 217
>gi|260901299|ref|ZP_05909694.1| ParB family protein [Vibrio parahaemolyticus AQ4037]
gi|308109857|gb|EFO47397.1| ParB family protein [Vibrio parahaemolyticus AQ4037]
Length = 136
Score = 41.2 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 190 EISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKY 249
E+ A + + +AQ++ K+M+VR TE+LV++ + + +++++
Sbjct: 35 EMGHARALLALEGEQQVEVAQMVAKKQMTVRQTEQLVKK-----CLAPQNEQKAQQEDTE 89
Query: 250 LTDLEKKISSKVGLNISIKHR-NNKGQFCIKYETNEQLKIICSLL 293
+ K+S + +S+ N K + I + +L + + L
Sbjct: 90 AEQMSHKLSQLLDAKVSLSRSANGKAKLTISIDEPHKLDQLIAKL 134
>gi|240117937|ref|ZP_04731999.1| ParB [Neisseria gonorrhoeae PID1]
gi|268603651|ref|ZP_06137818.1| predicted protein [Neisseria gonorrhoeae PID1]
gi|268587782|gb|EEZ52458.1| predicted protein [Neisseria gonorrhoeae PID1]
Length = 506
Score = 41.2 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 77/236 (32%), Gaps = 16/236 (6%)
Query: 1 MSNNYSKRRLGRGLAAL-IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFE 59
M+ + +K L +L IG Q+ S ++ + I I NPR +
Sbjct: 1 MNLDQNKATL-----SLHIGTPAQTNMSFGQEDTPSRGMLMSLPISEIDFFDKNPRRLHD 55
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL----------SEV 109
+ +SI+S GI QP+ V ++A R + L
Sbjct: 56 VSSYAAIKESIRSSGIQQPVHVTQRPGKSKYVLAQGGNTRLKILCELLEETGDNRFRMMP 115
Query: 110 PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHV 169
+ I D + +VEN R ++ ++A Y ++ + + + +
Sbjct: 116 CIYIPYSDETTLQVAHLVENELRAEMCFWDKACKYAEIRDIFQDESDSGKLSLRELEVMF 175
Query: 170 ANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
++ + + + + + + + + S S+ + +L
Sbjct: 176 SDKGLTVSHKTLGLFFFASDNLQELQEYAFKLSHAKVEEIKKLHSTLFSISKSIQL 231
>gi|332346689|gb|AEE60020.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 652
Score = 41.2 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLTSLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ + + AG RR A+ + + V + A +
Sbjct: 70 VGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGIIPADWPVRVKVIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|152973680|ref|YP_001338721.1| hypothetical protein KPN_pKPN4p07111 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|294496756|ref|YP_003560449.1| hypothetical protein pKpQIL_p072 [Klebsiella pneumoniae]
gi|150958462|gb|ABR80490.1| hypothetical protein KPN_pKPN4p07111 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|293339465|gb|ADE44019.1| hypothetical protein [Klebsiella pneumoniae]
Length = 669
Score = 41.2 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 7/212 (3%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES-EGLEDLCQSIKSHGIIQPLIV 81
+ ++ K + + + +++ +P N R E + +L +SI++ G+IQ L+V
Sbjct: 20 KPAEAAALKEALEAAQIELVPLSALIKSPLNVRTIPYPVESVRELAESIETIGLIQNLVV 79
Query: 82 RAIDNGLYKIIAGERRFRAA-----KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN 136
+ G+ + AG RR A + + VI++ V ++ ++ ++VEN QR ++
Sbjct: 80 HTLPEGMSGVAAGGRRLAALQLLLTENRIDAGYQVIVKRVSDELAVVASMVENNQRVAMH 139
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
P E+ G+ +L SE G + IG +G HV +L++ L + E++ + +
Sbjct: 140 PAEQIAGFRKL-SEQGKSPAQIGDQLGYGSRHVQRMLKLAHLAPEILELLANNTLDVEQC 198
Query: 197 RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
+ L SD QV K + + +
Sbjct: 199 QALSLESDQARQVQVYEQVKAAYSTVSAHLIK 230
>gi|320202247|gb|EFW76820.1| hypothetical protein ECoL_00468 [Escherichia coli EC4100B]
Length = 652
Score = 40.8 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ + + AG RR A+ + + + + A +
Sbjct: 70 VGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGIIPADWPVRVKIIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T G ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQTGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|290474580|ref|YP_003467460.1| hypothetical protein XBJ1_1553 [Xenorhabdus bovienii SS-2004]
gi|289173893|emb|CBJ80680.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004]
Length = 525
Score = 40.8 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 2/104 (1%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+++ L G AL+ + Q+ + + + E +++ + PNP NPR +
Sbjct: 1 MARQPLNMG-NALLQQGRQAAATLSE-QPPVSEMPMVLTLDQLRPNPDNPRTSRNPRYED 58
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
P + R + I + R ++ L +
Sbjct: 59 IKASIKVRGLDTVPKVTRDPEGDDVYIFSDGGNTRYQILSELWQ 102
>gi|220910648|ref|YP_002485958.1| ParB family protein [Cyanothece sp. PCC 7425]
gi|219867420|gb|ACL47757.1| ParB family protein [Cyanothece sp. PCC 7425]
Length = 123
Score = 40.8 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL 88
+ I I I N PR F L+ + +K G P+I+ +
Sbjct: 64 SAQGGIQEIEITRIQRNIFQPRQTFPQSELKAFAELLKQEGQHTPVILMPWKDTY 118
>gi|311111440|ref|ZP_07712837.1| conserved hypothetical protein [Lactobacillus gasseri MV-22]
gi|311066594|gb|EFQ46934.1| conserved hypothetical protein [Lactobacillus gasseri MV-22]
Length = 94
Score = 40.8 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ +SI+ I P +NPRN + ++ + SIK G QP++V IIAG +R
Sbjct: 2 KVETVSINKIKPYENNPRN--NDDAVDAVANSIKEFGWQQPIVVDNGGV----IIAGHKR 55
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
++AAK EVP+++ + +
Sbjct: 56 YKAAKKLGYKEVPIVVADSFDYWQRFNNCE 85
>gi|160939457|ref|ZP_02086807.1| hypothetical protein CLOBOL_04350 [Clostridium bolteae ATCC
BAA-613]
gi|158437667|gb|EDP15429.1| hypothetical protein CLOBOL_04350 [Clostridium bolteae ATCC
BAA-613]
Length = 284
Score = 40.8 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMA 104
+ P P NP + E E L +L +SIK GI+ P+I R ++G Y++IAG+RR RA+++A
Sbjct: 13 DLYPFPDNPFHVAEDETLSELAESIKEFGIVTPIITRPKEDGNGYEVIAGQRRVRASELA 72
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
++ +P + +D ++ + N+QR+++ P E A Y+
Sbjct: 73 GINTIPAFVLPLDRDRAIITLVDSNLQRENILPSERAFAYKMKSEAMKRQ 122
>gi|307313327|ref|ZP_07592950.1| parB-like partition protein [Escherichia coli W]
gi|306906749|gb|EFN37259.1| parB-like partition protein [Escherichia coli W]
gi|315063708|gb|ADT78034.1| conserved hypothetical protein [Escherichia coli W]
gi|323380961|gb|ADX53228.1| parB-like partition protein [Escherichia coli KO11]
Length = 652
Score = 40.8 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L +SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELAESIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ + + AG RR A+ + + + + A +
Sbjct: 70 VGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGIIPADWPVRVKIIPQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + + +++ G T G ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFRAMAQEGKTPAQTGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DRITTEHCQALALENDTARQVQVFEAAC 217
>gi|291528119|emb|CBK93705.1| ParB-like partition proteins [Eubacterium rectale M104/1]
gi|291540216|emb|CBL13327.1| ParB-like partition proteins [Roseburia intestinalis XB6B4]
Length = 301
Score = 40.8 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGE 95
E+ + ++ + ++P + L +L +SI+ G++ PL+VR G Y++I+G
Sbjct: 2 ETIRNVDVNRLHDFKNHPFKVEMNTELCELMRSIEKEGVLVPLLVRTNPYGDGYEVISGH 61
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQ 155
RR AA A ++VPV+IR +D+ ++ + N+ R++L P E+A Y+ + +
Sbjct: 62 RRKEAAIWAGETKVPVVIRELDDDQAVVAMVDSNLHRENLKPSEKAFAYKMKLDAMKHQG 121
Query: 156 NDI 158
+
Sbjct: 122 KHL 124
>gi|290476349|ref|YP_003469253.1| hypothetical protein XBJ1_3371 [Xenorhabdus bovienii SS-2004]
gi|289175686|emb|CBJ82489.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004]
Length = 525
Score = 40.8 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 2/104 (1%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
+++ L G AL+ + Q+ + + + E +++ + PNP NPR +
Sbjct: 1 MARQPLNMG-NALLQQGRQAAATLSE-QPPVSEMPMVLTLDQLRPNPDNPRTSRNPRYED 58
Query: 65 DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
P + R + I + R ++ L +
Sbjct: 59 IKASIKVRGLDTVPKVTRDPEGEDVYIFSDGGNTRYQVLSELWQ 102
>gi|90592604|ref|YP_529864.1| putative transcriptional regulator [Lactobacillus phage KC5a]
gi|89891933|gb|ABD78806.1| putative transcriptional regulator [Lactobacillus phage KC5a]
Length = 94
Score = 40.8 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ +SI+ I P +NPRN + ++ SIK G QP++V IIAG R
Sbjct: 2 KVETVSINKIKPYENNPRN--NDDAVDAAANSIKEFGWQQPIVVDNGGV----IIAGHTR 55
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
++AAK EVP+++ + +
Sbjct: 56 YKAAKKLGYKEVPIVVADSFDYWQRFNNCE 85
>gi|167747608|ref|ZP_02419735.1| hypothetical protein ANACAC_02329 [Anaerostipes caccae DSM 14662]
gi|210614553|ref|ZP_03290208.1| hypothetical protein CLONEX_02422 [Clostridium nexile DSM 1787]
gi|167652970|gb|EDR97099.1| hypothetical protein ANACAC_02329 [Anaerostipes caccae DSM 14662]
gi|210150669|gb|EEA81678.1| hypothetical protein CLONEX_02422 [Clostridium nexile DSM 1787]
Length = 284
Score = 40.8 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMA 104
+ P P NP + E E L +L +SIK GI+ P+I R ++G Y++IAG+RR RA+++A
Sbjct: 13 DLYPFPDNPFHVAEDETLSELAESIKEFGIVTPIITRPKEDGNGYEVIAGQRRVRASELA 72
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
++ VP + +D ++ + N+QR+++ P E A Y+
Sbjct: 73 GINTVPAFVLPLDRDRAIITLVDSNLQRENILPSERAFAYKMKSEAMKRQ 122
>gi|220930525|ref|YP_002507434.1| parB-like partition protein [Clostridium cellulolyticum H10]
gi|220000853|gb|ACL77454.1| parB-like partition protein [Clostridium cellulolyticum H10]
Length = 352
Score = 40.8 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
T E+ I I+ IVP ++P + E L + +SIK +G+I P++VR D+G Y
Sbjct: 27 NTTNKNKENATEIDINLIVPFKNHPFRLYTGEKLRQMVESIKENGVIVPIVVRKKDDGTY 86
Query: 90 KIIAGERRFRAAKMASLSEVP 110
+ +AG R AAK+A L++VP
Sbjct: 87 ENLAGHNRVNAAKLAGLTKVP 107
>gi|148927504|ref|ZP_01810999.1| ParB domain protein nuclease [candidate division TM7 genomosp.
GTL1]
gi|147887151|gb|EDK72624.1| ParB domain protein nuclease [candidate division TM7 genomosp.
GTL1]
Length = 386
Score = 40.8 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ I + P +NPR + E +E L +S+ G++ P+I +I G R
Sbjct: 7 QIHTVKIDVLKPALYNPRK-WSEEAIEQLTESVTRFGLVDPIIANGTPGRKNIVIGGHFR 65
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
+ AK EVPV+ ++ +++ E + + R E L
Sbjct: 66 LKIAKDLGYQEVPVVYVDIADETK-ERELNLRLNRNLGEWNMELLAQFDQ 114
>gi|163815067|ref|ZP_02206454.1| hypothetical protein COPEUT_01223 [Coprococcus eutactus ATCC 27759]
gi|166033458|ref|ZP_02236287.1| hypothetical protein DORFOR_03184 [Dorea formicigenerans ATCC
27755]
gi|332524067|ref|ZP_08400319.1| ParB-like protein [Streptococcus porcinus str. Jelinkova 176]
gi|158449750|gb|EDP26745.1| hypothetical protein COPEUT_01223 [Coprococcus eutactus ATCC 27759]
gi|166026643|gb|EDR45400.1| hypothetical protein DORFOR_03184 [Dorea formicigenerans ATCC
27755]
gi|295093499|emb|CBK82590.1| ParB-like partition proteins [Coprococcus sp. ART55/1]
gi|319757749|gb|ADV69691.1| hypothetical protein SSUJS14_0600 [Streptococcus suis JS14]
gi|332315331|gb|EGJ28316.1| ParB-like protein [Streptococcus porcinus str. Jelinkova 176]
Length = 284
Score = 40.8 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMA 104
+ P P NP + E E L +L +SIK GI+ P+I R ++G Y++IAG+RR RA+++A
Sbjct: 13 DLYPFPDNPFHVVEDETLSELAESIKEFGIVTPIITRPKEDGNGYEVIAGQRRVRASELA 72
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
++ VP + +D ++ + N+QR+++ P E A Y
Sbjct: 73 GINTVPAFVLPLDRDRAIITLVDSNLQRENILPSERAFAYRMKSEAMKRQ 122
>gi|301048749|ref|ZP_07195755.1| ParB-like partition protein [Escherichia coli MS 185-1]
gi|300299418|gb|EFJ55803.1| ParB-like partition protein [Escherichia coli MS 185-1]
Length = 654
Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ + + AG RR A+ + + + ++ A +
Sbjct: 70 VGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGIIPADWPVRVKIISQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFCAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DLITTEHCQALALENDTARQVQVFEAAC 217
>gi|41056964|ref|NP_957584.1| YdeB [Escherichia coli]
gi|38606101|gb|AAR25065.1| YdeB [Escherichia coli]
Length = 473
Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ + + AG RR A+ + + + ++ A +
Sbjct: 70 VGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGIIPADWPVRVKIISQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFCAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DLITTEHCQALALENDTARQVQVFEAAC 217
>gi|9507593|ref|NP_052924.1| hypothetical protein R100p044 [Plasmid R100]
gi|133756487|ref|YP_001096443.1| hypothetical protein NR1_p047 [Escherichia coli]
gi|219586071|ref|YP_002456165.1| ParB-like partition protein [Escherichia coli]
gi|256367675|ref|YP_003108244.1| probable chromosome partitioning protein parB [Escherichia coli]
gi|312964351|ref|ZP_07778645.1| parB-like partition s domain protein [Escherichia coli 2362-75]
gi|5103192|dbj|BAA78828.1| ydeB [Plasmid R100]
gi|89033312|gb|ABD59990.1| hypothetical protein [Escherichia coli]
gi|218931654|gb|ACL12427.1| ParB-like partition protein [Escherichia coli]
gi|228480612|gb|ACQ41940.1| probable chromosome partitioning protein parB [Escherichia coli]
gi|312290828|gb|EFR18704.1| parB-like partition s domain protein [Escherichia coli 2362-75]
gi|323958997|gb|EGB54668.1| ParB nuclease domain-containing protein [Escherichia coli H489]
Length = 473
Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 85/208 (40%), Gaps = 21/208 (10%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKS 72
L+AL+ + + + + S++ +P N R + +E + +L SIK
Sbjct: 26 LSALLAQTEE----------------VSVPLASLIKSPLNVRTVPYSAESVSELADSIKG 69
Query: 73 HGIIQPLIVRAIDNGLYKIIAGERR----FRAAKMASLSEVPVIIRNVDNKSSLEIAIVE 128
G++Q L+V A+ + + AG RR A+ + + + ++ A +
Sbjct: 70 VGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGIIPADWPVRVKIISQELATAASMT 129
Query: 129 NVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK 188
+ E + +++ G T IG ++G S HV +L++ L + + + +
Sbjct: 130 ENGHRRDMHPAEQIAGFCAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAE 189
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ I+ H + L +D QV +
Sbjct: 190 DLITTEHCQALALENDTARQVQVFEAAC 217
>gi|261819933|ref|YP_003258039.1| hypothetical protein Pecwa_0608 [Pectobacterium wasabiae WPP163]
gi|261603946|gb|ACX86432.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163]
Length = 574
Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 3/108 (2%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M++ + L AL+ + + E +++ + PNP NPR
Sbjct: 1 MASKP--KALNMT-DALLMRGKSPAQQSQVAVLPVSEMAMVLTLDELRPNPDNPRTSRNP 57
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
+ + P + R D I + R + L +
Sbjct: 58 KYADIKASIRMRGLDSLPKVTRDPDGDDIYIFSDGGNTRYQILCELYQ 105
>gi|317498313|ref|ZP_07956611.1| ParB-like partition protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894389|gb|EFV16573.1| ParB-like partition protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 284
Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMA 104
+ P P NP + E E L +L +SIK GI+ P+I R ++G Y++IAG+RR RA+++A
Sbjct: 13 DLYPFPDNPFHVAEDETLSELAESIKEFGIVTPIITRPKEDGNGYEVIAGQRRVRASELA 72
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
++ VP + +D ++ + N+QR+++ P E A Y+
Sbjct: 73 GINTVPAFVLPLDRDRAIITLVDSNLQRENILPSERAFAYKMKSEAMKRQ 122
>gi|242398929|ref|YP_002994353.1| predicted AAA ATPase [Thermococcus sibiricus MM 739]
gi|242265322|gb|ACS90004.1| predicted AAA ATPase [Thermococcus sibiricus MM 739]
Length = 100
Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 5 YSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPH 52
K+ LGRGL ALI E + EK E + E +SIH + NP
Sbjct: 1 MKKKALGRGLEALISE---PLPIEEKPKEELNEEVLMLSIHEALKNPR 45
>gi|332288462|ref|YP_004419314.1| ParB-like nuclease domain protein [Gallibacterium anatis UMN179]
gi|330431358|gb|AEC16417.1| ParB-like nuclease domain protein [Gallibacterium anatis UMN179]
Length = 562
Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 2/107 (1%)
Query: 2 SNNYSKRRLGRGLAA-LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
S K L RG+ LI + + T+T +++ + P +NPR
Sbjct: 8 SKEERKASLMRGIQVGLIPNTSPDYTAAITATQTAEPELRTVTLLELRPFDNNPRKTQNP 67
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLS 107
E++ +SI+ G+ P + N + IIA R + L
Sbjct: 68 -KFEEIKESIRVRGLDFPPNITKRPNENFYIIADGGNTRLQALKELY 113
>gi|159186453|ref|NP_395940.2| replication protein B [Agrobacterium tumefaciens str. C58]
gi|21553890|gb|AAF87251.2|AF283811_2 putative replication protein B [Agrobacterium tumefaciens str. C58]
gi|159141513|gb|AAK90381.2| replication protein B [Agrobacterium tumefaciens str. C58]
Length = 343
Score = 40.8 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 4/170 (2%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED-LCQSIKSHGII 76
I ++ D + E+ + + I P+P R ++ + SI+S G
Sbjct: 54 IDDIKSERDRLKALVESGGGAIRELDPSKIDPSPFPDRLPDDNASDFETFRNSIRSEGQK 113
Query: 77 QPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
P+ VR Y++I G RR RAAK + V I + + + +EN R+D
Sbjct: 114 VPIQVRKSPSSPERYQVIYGHRRLRAAKDLGIP-VKAIEVEISDVELVIAQGIENADRQD 172
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
L +E AL ++ ++ ++ +P + E
Sbjct: 173 LTWIERALFARRMDDADVKPRDIKAALSIDDPELARMRAVYRSVPFEIIE 222
>gi|225019531|ref|ZP_03708723.1| hypothetical protein CLOSTMETH_03484 [Clostridium methylpentosum
DSM 5476]
gi|224947676|gb|EEG28885.1| hypothetical protein CLOSTMETH_03484 [Clostridium methylpentosum
DSM 5476]
Length = 490
Score = 40.4 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 61/134 (45%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ ++ E E I + ++P N ++ SI++ G+ QP I
Sbjct: 177 IPKTDKPVEPFVIPEVEQTVRIPHEQLHAFKNHPFNVEKNAKFMAFVSSIRAQGVTQPAI 236
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
VR D G Y+II+G RR + A + P IIR + ++ +++ + +NV ++++ +E
Sbjct: 237 VRPDDKGGYEIISGHRRDAGSIEAGIPYTPCIIRALTDEQAIQQMVEDNVNNREVSTMEL 296
Query: 141 ALGYEQLISEYGYT 154
A + + +
Sbjct: 297 AKALKMQLEAIKHQ 310
>gi|296285154|ref|ZP_06863152.1| hypothetical protein CbatJ_16112 [Citromicrobium bathyomarinum
JL354]
Length = 317
Score = 40.4 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 13/231 (5%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
I + +VP+P N R + L I + G++Q L+VR G +++ AG RR
Sbjct: 2 IQSIPLKKLVPSPRNVRKSSDVLADLQLRADIGARGLLQNLVVRKGKRGKFEVEAGGRRL 61
Query: 99 RAAKMASL-------SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
A + + EV ++ + E ++ EN QR +NP +EA + +I
Sbjct: 62 AALQALAEEGPLSESHEVTCLVIEGEESEVREASLAENFQRLAMNPADEAQAFAAIIEAG 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
T D+ G + V LR+ L V E + + I+L A+ + SD A V
Sbjct: 122 A-TTEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTITLDMAKAYGAISDVERQAHV 180
Query: 212 IV--SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD---LEKKI 257
+ + + + + ++ YLT +E+++
Sbjct: 181 YAELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLTAGGRIEREL 231
>gi|85708177|ref|ZP_01039243.1| hypothetical protein NAP1_03040 [Erythrobacter sp. NAP1]
gi|85689711|gb|EAQ29714.1| hypothetical protein NAP1_03040 [Erythrobacter sp. NAP1]
Length = 656
Score = 40.4 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 8/181 (4%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
I + +VP+P N R + L I + G++Q L+VR G +++ AG RR
Sbjct: 2 IQSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKAKRGKFEVEAGGRRL 61
Query: 99 RAAKMA-------SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
+ EV ++ + E ++ EN QR +NP +EA + +I
Sbjct: 62 AQLQALAEEGSLPKNHEVTCLVIEGEESEVREASLAENFQRLAMNPADEAQAFAAIIEAG 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
+ D+ G + V LR+ L V E + + I+L A+ + SD A V
Sbjct: 122 A-STEDVARRFGLTARFVEGRLRLAGLAPCVFEALAEGAITLDMAKAYGAISDIDRQAHV 180
Query: 212 I 212
Sbjct: 181 F 181
>gi|313906329|ref|ZP_07839671.1| ParB domain protein nuclease [Eubacterium cellulosolvens 6]
gi|313468835|gb|EFR64195.1| ParB domain protein nuclease [Eubacterium cellulosolvens 6]
Length = 323
Score = 40.4 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 50/152 (32%), Gaps = 2/152 (1%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
+ E K+E + I I N N F+ + + + + IK G+++PL+
Sbjct: 22 SSILKKKEETKSEIKNSGIKDLDITRIKSNKLN--TDFDMDDVAEYAKEIKKVGLLEPLL 79
Query: 81 VRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
V +G +++++G +R A + VP + +K +
Sbjct: 80 VYEEHDGSFELVSGHQRLAAVRKLGWKTVPCRMIPYTEDPEKRFFQHFYANKKRKHNSRF 139
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANI 172
+ + + + + +
Sbjct: 140 WSVEIRNARQVMNSLKLTQTREEEYNQLSDML 171
>gi|291562976|emb|CBL41792.1| Predicted transcriptional regulators [butyrate-producing bacterium
SS3/4]
Length = 199
Score = 40.4 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
AL + + K T I + I P +P +E E LED+ QSI+ HG
Sbjct: 13 DAL----DLLAEDSVKNTPVAVNGIVSIPVEEIHPFHDHPFRLYEGERLEDMVQSIREHG 68
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
++ L++ Y+++AG R AAK+A L+EVP
Sbjct: 69 VL-NLLIVRKAARGYEMLAGHNRTNAAKIAGLTEVP 103
>gi|331088983|ref|ZP_08337890.1| hypothetical protein HMPREF1025_01473 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330406435|gb|EGG85948.1| hypothetical protein HMPREF1025_01473 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 284
Score = 40.4 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMA 104
+ P P NP + E E L +L +SIK GI+ P+I R ++G Y++IAG+RR RA+++A
Sbjct: 13 DLYPFPDNPFHVAEDETLSELAESIKEFGIVTPIITRPKEDGNGYEVIAGQRRVRASELA 72
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
++ VP + +D ++ + N+QR+++ P E A Y+
Sbjct: 73 GINTVPAFVLPLDRDRAIITLVDSNLQRENILPSERAFAYKMKSEAMKRQ 122
>gi|302382757|ref|YP_003818580.1| ParB domain protein nuclease [Brevundimonas subvibrioides ATCC
15264]
gi|302193385|gb|ADL00957.1| ParB domain protein nuclease [Brevundimonas subvibrioides ATCC
15264]
Length = 281
Score = 40.4 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 96/258 (37%), Gaps = 19/258 (7%)
Query: 28 PEKKTETIPESQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKSHGIIQPLIVRAI-- 84
+ T ++ + ++ + +P N R +E SIK+ G++QP +V
Sbjct: 10 ATEATAPQHGAELIVPLNRLKASPKNARKTPHSPATIEAFAASIKAKGVLQPPVVEIERN 69
Query: 85 ----DNGLYKIIAGERRFRAA-----KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDL 135
G Y + GE R + + PV + + EI++ EN+ R+ +
Sbjct: 70 DEGAPTGNYLVTIGEGRRQGLRLLAKRKTIKRTHPVRVIVDAENDAHEISLDENMTREAM 129
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+P ++ +++L E GY +IG+ G S V LR+ + R ++L
Sbjct: 130 HPADQFEAFQRLAVEKGYGPEEIGARFGVSAHVVRQRLRLGSAVPELMAAYRAGTLALDQ 189
Query: 196 ARTLVSTSDPLSLAQVIVS--KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE----KY 249
+ D QV+ + E R+ F G E
Sbjct: 190 LTAFCVSEDQDRQRQVLEQVGPHTPAYAIRRAMTEAKVSVGDRRVRFVGVENYEAAGGPV 249
Query: 250 LTDLEKKISSKVGLNISI 267
L DLE K+ SK+ + I
Sbjct: 250 LRDLE-KVCSKLRVRTRI 266
>gi|153810229|ref|ZP_01962897.1| hypothetical protein RUMOBE_00610 [Ruminococcus obeum ATCC 29174]
gi|153855524|ref|ZP_01996643.1| hypothetical protein DORLON_02659 [Dorea longicatena DSM 13814]
gi|154506125|ref|ZP_02042863.1| hypothetical protein RUMGNA_03667 [Ruminococcus gnavus ATCC 29149]
gi|160914375|ref|ZP_02076590.1| hypothetical protein EUBDOL_00379 [Eubacterium dolichum DSM 3991]
gi|160934987|ref|ZP_02082373.1| hypothetical protein CLOLEP_03863 [Clostridium leptum DSM 753]
gi|167751521|ref|ZP_02423648.1| hypothetical protein EUBSIR_02522 [Eubacterium siraeum DSM 15702]
gi|167760871|ref|ZP_02432998.1| hypothetical protein CLOSCI_03259 [Clostridium scindens ATCC 35704]
gi|223932191|ref|ZP_03624195.1| parB-like partition protein [Streptococcus suis 89/1591]
gi|260589821|ref|ZP_05855734.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
gi|325263035|ref|ZP_08129770.1| hypothetical protein HMPREF0240_02026 [Clostridium sp. D5]
gi|149752046|gb|EDM61977.1| hypothetical protein DORLON_02659 [Dorea longicatena DSM 13814]
gi|149833408|gb|EDM88489.1| hypothetical protein RUMOBE_00610 [Ruminococcus obeum ATCC 29174]
gi|153793624|gb|EDN76044.1| hypothetical protein RUMGNA_03667 [Ruminococcus gnavus ATCC 29149]
gi|156866440|gb|EDO59812.1| hypothetical protein CLOLEP_03863 [Clostridium leptum DSM 753]
gi|158433533|gb|EDP11822.1| hypothetical protein EUBDOL_00379 [Eubacterium dolichum DSM 3991]
gi|167655329|gb|EDR99458.1| hypothetical protein EUBSIR_02522 [Eubacterium siraeum DSM 15702]
gi|167661474|gb|EDS05604.1| hypothetical protein CLOSCI_03259 [Clostridium scindens ATCC 35704]
gi|223899172|gb|EEF65529.1| parB-like partition protein [Streptococcus suis 89/1591]
gi|260539824|gb|EEX20393.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
gi|291540152|emb|CBL13263.1| ParB-like partition proteins [Roseburia intestinalis XB6B4]
gi|324031428|gb|EGB92708.1| hypothetical protein HMPREF0240_02026 [Clostridium sp. D5]
Length = 284
Score = 40.4 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGL-YKIIAGERRFRAAKMA 104
+ P P NP + E E L +L +SIK GI+ P+I R ++G Y++IAG+RR RA+++A
Sbjct: 13 DLYPFPDNPFHVAEDETLSELAESIKEFGIVTPIITRPKEDGDGYEVIAGQRRVRASELA 72
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYT 154
++ VP + +D ++ + N+QR+++ P E A Y+
Sbjct: 73 GINTVPAFVLPLDRDRAIITLVDSNLQRENILPSERAFAYKMKSEAMKRQ 122
>gi|188588679|ref|YP_001921137.1| ParB protein [Clostridium botulinum E3 str. Alaska E43]
gi|188498960|gb|ACD52096.1| ParB protein [Clostridium botulinum E3 str. Alaska E43]
Length = 382
Score = 40.4 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 108/231 (46%), Gaps = 4/231 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
+ + I+S+VP+ +N ++ +E+L SIK +G++ L+VR I NG Y+II+GERR+
Sbjct: 22 EELDINSLVPSKNN---FYGIREIEELAASIKENGLMHNLVVRDIGNGKYEIISGERRYT 78
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
A K +VP IR +++ + + I N+++++L P E+ G ++L + Y + +
Sbjct: 79 ALKKLGYEKVPCQIREINDLDAELMLIHANLEQRELTPTEKMEGIKRLENIYKKKRKNGE 138
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+ GK+R + + + + I K+ I + + K
Sbjct: 139 KLDGKTRDLIGKDFGLSGVQVGRYKKIGKDLIPELKEKLNKEDITLTQAHTLSSLTKEEQ 198
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHR 270
+ + ++ + K+ K + K+ + +KK+ ++ IK
Sbjct: 199 KIIHDEIKNLNTKEHKLEVDILVQGIKQPIEREEDKKLLEELNNK-KIKQN 248
>gi|302538864|ref|ZP_07291206.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302447759|gb|EFL19575.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 427
Score = 40.4 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 94/246 (38%), Gaps = 23/246 (9%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF--ESEGL---EDLCQ---SI 70
G + + + + + + P P NPR F + E E+L Q S
Sbjct: 21 GRSERGRAKAIAQGDVPAYELIRVPLDQVSPTPLNPRRNFGTDEEKTRFGEELRQAQLSA 80
Query: 71 KSHGIIQPLIVRAIDNGLYKIIA------GERRFRAAKMASLSEVPVIIRNV---DNKSS 121
+ + D+ A GERRFR+A L + ++R+
Sbjct: 81 CVVVGREAYLGLWPDHASRIGAAAYVLINGERRFRSAVHVGLESLDFVVRDDLAVSRADF 140
Query: 122 LEIAIVENVQRKDLNPLEEALGYEQLISEY------GYTQNDIGSIVGKSRSHVANILRI 175
++ + EN++R+D + +E A G +QL+ ++ +GKS S + N L +
Sbjct: 141 IDHLLAENLEREDFDVIERARGVQQLVDTCAEQGREHGAKSRAAERLGKSPSWITNQLVL 200
Query: 176 LKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEK 235
L+LP ++ M+ ++ R L + A + + + + + ++E
Sbjct: 201 LELPEEIQAMLSSGDMPERDGRLLARAAKDRPGADAASLLDLLQENKAQEARAKAAQREI 260
Query: 236 RKKIFE 241
++ E
Sbjct: 261 LREARE 266
>gi|27728757|gb|AAO18652.1| RepB [Rhizobium leguminosarum bv. viciae]
Length = 345
Score = 40.4 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 4/170 (2%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE-GLEDLCQSIKSHGII 76
I ++ D + E+ + + I P+P+ R + E +SI++ G
Sbjct: 55 IDDIRTERDRLKAIVESGGGTVRELDPSLIDPSPYPDRLPDDDATSFEAFKRSIETEGQQ 114
Query: 77 QPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKD 134
P+ VR G Y+I+ G RR+ AAK V I + + + +EN R+D
Sbjct: 115 VPVQVRKHPSSPGRYQIVYGHRRWLAAKQIGKP-VRAIEVEISDLDLVLAQGIENAGRQD 173
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
L +E AL ++ ++ ++ + +P+ + E
Sbjct: 174 LTWIERALFASRMDDAGIKPRHIYAALSIEDAELARMRNVYRIIPADIIE 223
>gi|313652039|ref|YP_004046717.1| parB-like partition protein [Calditerrivibrio nitroreducens DSM
19672]
gi|312940790|gb|ADR19981.1| parB-like partition protein [Calditerrivibrio nitroreducens DSM
19672]
Length = 323
Score = 40.4 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 111/264 (42%), Gaps = 11/264 (4%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
N+S + + + + I IV + R F+ +G+E+L +SIK +G+I P++V
Sbjct: 8 NKSRATNILSGDLYQTNMVKVPIDKIVADE-QIRKKFDEKGIEELAESIKKYGLINPILV 66
Query: 82 RAIDN-GLYKIIAGERRFRAAKMASLSEVPVII-RNVDNKSSLEIAIVENVQRKDLNPLE 139
D ++KIIAGERR+ A K ++++ V + + + ENV+R+DL E
Sbjct: 67 ELDDKTQMFKIIAGERRYLACKKLGINKITVHVLGSRSENEKKIMQFEENVRREDLTLYE 126
Query: 140 EALGYEQLISEYGYTQNDIGSIVGKS----RSHVANILRILKLPSSVREMIRKEEISLGH 195
++ +L+ ++ + I + + ++++E I K
Sbjct: 127 KSTAIFELMQDFLAEKVGIDKSIDNILSELIKINDGKSSLNLKVATIKEDIEKYFGMSLM 186
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQ-EQDNKKEKRKKIFEGSREKEKYLTDLE 254
+ + ++ + + ++ T L+ N KE ++ + E + ++
Sbjct: 187 SIIYLLYPLSFNIDHIKYMHEANIPITIFLLFISVKNDKEFIEECLDKYLEGKINAEKIK 246
Query: 255 KKISSKVGLNISIKHRNNKGQFCI 278
+ +S K N + + + I
Sbjct: 247 RLVSGKKDTNQKTEVKK---RIRI 267
>gi|294633259|ref|ZP_06711818.1| plasmid partitioning protein [Streptomyces sp. e14]
gi|292831040|gb|EFF89390.1| plasmid partitioning protein [Streptomyces sp. e14]
Length = 242
Score = 40.4 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 32/102 (31%), Gaps = 15/102 (14%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDC-------ISIHSIVPNPHN 53
MS LG G G + + + + + I PNP N
Sbjct: 51 MSKADQ---LGTG---RFGATARPVSARRAAIGAATGVPTEGVAPPTRLPLDRISPNPDN 104
Query: 54 PRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
PR L +L S++ HG Q + V D + E
Sbjct: 105 PRTSL--GDLTELTGSLREHGQKQAITVMNRDAYVKANPERE 144
>gi|317501174|ref|ZP_07959379.1| ParB family Chromosome partitioning protein [Lachnospiraceae
bacterium 8_1_57FAA]
gi|316897350|gb|EFV19416.1| ParB family Chromosome partitioning protein [Lachnospiraceae
bacterium 8_1_57FAA]
Length = 283
Score = 40.4 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 10/229 (4%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN--G 87
K TE + I+I + +P N R + +++L +SIK+ G++Q L V +
Sbjct: 5 KITERRADMIQDIAIEQLDIHPQNVRKVYTD--IDELAESIKARGVMQNLTVVPNPDKKD 62
Query: 88 LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQL 147
Y ++ G RR AA+ A L +P + + K + ++EN+QR DL+ E+A G++ +
Sbjct: 63 HYLVVIGNRRLTAARKAGLKTMPCSVVEMTEKEQISTMLLENMQRSDLSVSEQAQGFQLM 122
Query: 148 ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLS 207
+ G T+ I G SRS V + L + KL + + L
Sbjct: 123 LDL-GETETTIAEKTGFSRSTVRHRLNLAKLDQETLTRREENKDFQLTLTDLYELEKVQD 181
Query: 208 LAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ K+ + T +E K ++ K + + + LE+K
Sbjct: 182 -----IKKRNEILKTAVSSREIAWKAKQAVKEEKIKKNAQIVFEILEEK 225
>gi|325983749|ref|YP_004296150.1| parB-like partition protein [Nitrosomonas sp. AL212]
gi|325533268|gb|ADZ27988.1| parB-like partition protein [Nitrosomonas sp. AL212]
Length = 354
Score = 40.4 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 81/245 (33%), Gaps = 5/245 (2%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
++ S E+ IS+ I+ + PR F++ L +L ++IK G+ P+
Sbjct: 2 TSKKTLSDERNKAPNVLGASQISLDLIMEDAAQPRKTFDAASLAELTETIKLRGVKTPIS 61
Query: 81 VRAIDNGL--YKIIAGERRFRAAKMASLSEVPVII---RNVDNKSSLEIAIVENVQRKDL 135
VR + Y I G RR+RA+K A L +P I ++ ++ + R+ +
Sbjct: 62 VRPNPDKPGTYIINHGARRYRASKNAGLRSIPAYIDADYSLADQVVENLQRDNLTSREIV 121
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGH 195
+ + + + + G S V + + I +L +S +L
Sbjct: 122 DYIGREIAAGKTHEQIGKFIGKSASYVSLHAAAMDLPDPIAELFNSGNLTDIAAIFNLKK 181
Query: 196 ARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEK 255
L + + + EK + LE
Sbjct: 182 IFKTYPLELVDWLKYSRPEDITRTKIQQFRKFLESKDDEKGIVDELTRQAPYPATDSLET 241
Query: 256 KISSK 260
K K
Sbjct: 242 KAEKK 246
>gi|221215367|ref|ZP_03588332.1| chromosome partitioning protein ParB [Burkholderia multivorans
CGD1]
gi|221164799|gb|EED97280.1| chromosome partitioning protein ParB [Burkholderia multivorans
CGD1]
Length = 333
Score = 40.4 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 3/126 (2%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV- 81
+ D E + + + I + NP N R + E +++ SI G + P++
Sbjct: 51 EGFDVETLVPEDVKKFETTWPIDKVDDNPLNSRKIYNEEKVKERANSIAKVGQLVPVLAA 110
Query: 82 -RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLE 139
D+ +I G+ R RA + E+ V I +A N +R+ + L+
Sbjct: 111 RHPTDSERLILIDGQYRKRARLSLNHKELFVRILENLSQIDFWRLARTANSEREQESVLD 170
Query: 140 EALGYE 145
A G+
Sbjct: 171 SAFGFR 176
>gi|21234218|ref|NP_639829.1| putative plasmid partitioning protein, parb2 [Streptomyces
coelicolor A3(2)]
gi|13620705|emb|CAC36745.1| putative plasmid partitioning protein, ParB2 [Streptomyces
coelicolor A3(2)]
Length = 381
Score = 40.0 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 17/207 (8%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR---NYFESEGLE----------D 65
ID E+ + + + I NP NPR +
Sbjct: 21 SSRRNLIDQTIAGEESTTAAITELPVTLISDNPDNPRNHLRNLDETVQSVREVGLIIPIA 80
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN---VDNKSSL 122
+ D Y ++ G RR AA+ L+ +PV + N ++S L
Sbjct: 81 VATVDAYLRNRSDRAGDLDDGAQYIVVDGHRRLEAARRVGLATIPVRVDNGRVATDESLL 140
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E A V N R+D+ LEEA + L+ YG +Q +G ++ +++ L +LKL +
Sbjct: 141 EAAFVANYHREDMTDLEEAHALKSLVDYYG-SQTKAAKRLGIPQNTISSKLSLLKLAPEL 199
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLA 209
++ + + H R L S A
Sbjct: 200 QKDLVTGARKVEHVRNLGKLSAEEQRA 226
>gi|222102331|ref|YP_002546472.1| replication protein B [Agrobacterium vitis S4]
gi|221739575|gb|ACM40277.1| replication protein B [Agrobacterium vitis S4]
Length = 345
Score = 40.0 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 48/282 (17%), Positives = 103/282 (36%), Gaps = 20/282 (7%)
Query: 13 GLAAL------IGEVNQSIDSPEKKTE--TIPESQDCISIHSIVPNPHNPRNYFESEGLE 64
GL AL I E+ D+ E E+ + + I + + R + G
Sbjct: 37 GLGALGAVTRSIDELAARADAARDLEERLAAGETIVDLDVDLIDSSFISDRVGMDEVGFR 96
Query: 65 DLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSL 122
+L ++I G P++VR + ++ + G RR RAAK +S V +++ ++++ +
Sbjct: 97 ELVEAISVRGQDSPILVRPHPDRTGRFQTVFGHRRVRAAKELGIS-VRAVVKKLEDRDHV 155
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
EN QR DL+ +E AL L + ++ + + I + P +
Sbjct: 156 IAQGQENSQRADLSFIERALFARNLELGNFGRDTIMLALGADKTTVSKMLSAIERFPEDI 215
Query: 183 REMI----RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
+ + + A+ +++ V + E E + ++
Sbjct: 216 LATVTQARAPGRDRWYGIGAALGNPAIAAKARNLLTHDDYVAASPESRFEMLERLIPKEM 275
Query: 239 IFEGSREKEKYLTDLEKKISSKV---GLNISIKHR--NNKGQ 275
++ + I + + G ++I + N G+
Sbjct: 276 KVSKKGSTDQKWVSPKNLIKATIKNNGSGVTIALKPFKNSGK 317
>gi|120611345|ref|YP_971023.1| hypothetical protein Aave_2677 [Acidovorax citrulli AAC00-1]
gi|120589809|gb|ABM33249.1| hypothetical protein Aave_2677 [Acidovorax citrulli AAC00-1]
Length = 569
Score = 40.0 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 56/199 (28%), Gaps = 18/199 (9%)
Query: 6 SKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLED 65
++ L +G + + + E + S +SIH I P +NPR +
Sbjct: 53 ARAALNKG--------SANATANLDPLEEVDGSLTILSIHEIDPYKYNPRTKPNP-ARAN 103
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN---------V 116
L S+K+ GI + V G R L
Sbjct: 104 LKASMKAEGITNVITVTRRSPKEKYFPYGGGNTRIELAKELYAEGEDRFATLAVVTKKWP 163
Query: 117 DNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRIL 176
+ + + EN R D++ E A G E+ I + ++ L
Sbjct: 164 GEAAVISAHLSENDNRGDISFWERAQGVAAFKREFERESGRILTAAEINKELKERGLNYG 223
Query: 177 KLPSSVREMIRKEEISLGH 195
+ +G
Sbjct: 224 LKTIQNFAFATEHLYPVGP 242
>gi|121582603|ref|YP_974132.1| ParB family protein [Acidovorax sp. JS42]
gi|120608659|gb|ABM44397.1| ParB family protein [Acidovorax sp. JS42]
Length = 355
Score = 40.0 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 88/232 (37%), Gaps = 12/232 (5%)
Query: 27 SPEKKTETIPESQDCISIHSIVPNPHNPRNY----FESEGLEDLCQSIKSHGIIQPLIVR 82
P+ + + I +PH PR F E + ++ ++IK+ G+ P+ VR
Sbjct: 40 EPQAANAAPGGGPQELLLDLIDEDPHQPRTADNPGFSPESIAEIGETIKARGVKSPISVR 99
Query: 83 AID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEE 140
G Y I G RR+R +K A + +P I + E V +++ E
Sbjct: 100 ENPDAPGRYLINHGARRYRGSKWAEKTSIPAFI----DNDYNEADQVIENLQRNELTARE 155
Query: 141 ALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLV 200
+ G +++I +GKS + V + +L LP + +
Sbjct: 156 IADFIGRELAKGKKKSEIAKEIGKSPAFVTQHVTLLDLPEPIARAFNAGRSKDVTVINEL 215
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+T+ + +V V + ++ + + + K+ +G E++ D
Sbjct: 216 ATAYKKNPEEVRVWLEDDSQELTRGSVKMLREYLEDKRSQDG--ERDPNTVD 265
>gi|168698252|ref|ZP_02730529.1| Chromosome partitioning protein ParB [Gemmata obscuriglobus UQM
2246]
Length = 265
Score = 40.0 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 72/177 (40%), Gaps = 7/177 (3%)
Query: 39 QDCISIHSIVPNPHNPRN--YFESEGLED---LCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
I++ ++P+ NPR + L S+ G QP+ V ++ Y +I+
Sbjct: 2 IVLIAVALLLPHEDNPRKLDQLTPAEKAELLDLGTSMVQDGQKQPIRVVKREDDRYTVIS 61
Query: 94 GERRFRAAKMASLSEVPVII--RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
G RR AA++ + + I+ L ++EN QR+ + ++ Y+ LI E
Sbjct: 62 GHRRLLAARLVGMQSLSAIVLDGMPTRTELLVDQLIENEQRRGFSEIDRCEAYQALIREN 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSL 208
+T + V S S V L + +L ++ +R + A + +P
Sbjct: 122 NWTAKQLAEAVHVSESSVTKTLTLKRLCPELQGAVRTGLLRGSSAYHIARVGNPDKQ 178
>gi|163735604|ref|ZP_02143035.1| plasmid partitioning protein RepBf1 [Roseobacter litoralis Och 149]
gi|161391032|gb|EDQ15370.1| plasmid partitioning protein RepBf1 [Roseobacter litoralis Och 149]
Length = 331
Score = 40.0 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 21 VNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLI 80
V+ + K E+ I I + N R + E E+L SI S G P++
Sbjct: 37 VSIDSLAENSKRLLEGETIVEIDPALIDASFVNDRLSGDDEAFEELKASIASSGQDTPVL 96
Query: 81 VRAIDN--GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPL 138
+R Y ++ G RR R A+ V +++ +D+ + + EN R DL+ +
Sbjct: 97 LRPHPEAANRYMVVFGHRRVRVARALG-RPVRAVVKEMDDVAHVLAQGQENTARADLSFI 155
Query: 139 EEALGYEQLIS 149
E+AL L
Sbjct: 156 EKALFARNLHD 166
>gi|331090077|ref|ZP_08338966.1| hypothetical protein HMPREF1025_02549 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402539|gb|EGG82108.1| hypothetical protein HMPREF1025_02549 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 174
Score = 39.7 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDN--GLYKIIAGER 96
I+I + +P N R + +++L +SIK+ G++Q L V + Y ++ G R
Sbjct: 2 IQDIAIEQLDIHPQNVRKVYTD--IDELAESIKARGVMQNLTVVPNPDKKDHYLVVIGNR 59
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R AA+ A L +P + + K + ++EN+QR DL+ E+A G++ ++
Sbjct: 60 RLTAARKAGLKTMPCSVVEMTEKEQISTMLLENMQRSDLSVSEQAQGFQLMLDLGETETT 119
Query: 157 DIGSIVGKSRSHVANIL 173
+ +
Sbjct: 120 IAEKTGFSRSTVRHRLN 136
>gi|229828949|ref|ZP_04455018.1| hypothetical protein GCWU000342_01034 [Shuttleworthia satelles DSM
14600]
gi|229792112|gb|EEP28226.1| hypothetical protein GCWU000342_01034 [Shuttleworthia satelles DSM
14600]
Length = 304
Score = 39.7 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 96/248 (38%), Gaps = 20/248 (8%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI--DNGLYKIIAG 94
++ ISI + P+P NPR + L +L SIK +G++Q L V D G + I+ G
Sbjct: 4 KNTISISIEHLFPHPGNPRK--DLGDLAELTDSIKKNGLMQNLTVMPKEGDKGNFTILIG 61
Query: 95 ERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKDLNPLEEALGYEQL------ 147
RR AA++A + VP I + + I + EN+QR DL E+A G++ +
Sbjct: 62 HRRCAAARLAGVKMVPCRIVEGLSEREQVSIMLEENMQRNDLTIWEQANGFQMMLDLGET 121
Query: 148 ---------ISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHART 198
S + + +L + K + +
Sbjct: 122 EASIAEKTGFSRPTIKHRLEIAKLDSKALKAKEQEEGFQLSLMDLYQLEKIKDVKKRNQI 181
Query: 199 LVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKIS 258
L + +LA ++ ++ + E L D KE + E+E Y E +S
Sbjct: 182 LEEAENSNALAFAVIREQRKEKAQETLQILTDKLKEHGMQKAPEGAEREIYSDKWETILS 241
Query: 259 SKVGLNIS 266
+ ++
Sbjct: 242 FDLDSDVK 249
>gi|291543042|emb|CBL16152.1| ParB-like partition proteins [Ruminococcus bromii L2-63]
Length = 281
Score = 39.7 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFR 99
ISI+ + +P +++ + +L +S++ GI+ PLIVR ++ Y+II+G RRFR
Sbjct: 4 ISINKLHEFKDHPYQVLDNDEMNNLIESVQQQGIMTPLIVRPLEGTTDEYEIISGHRRFR 63
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLIS 149
AA+ A L+EVP IR V + + + N+ R+ L P E+A Y+
Sbjct: 64 AAQKAGLTEVPAFIRPVSRDEAAIMLVDSNLHREHLLPSEKAFAYKLKYD 113
>gi|332800339|ref|YP_004461838.1| DNA methylase N-4/N-6 domain-containing protein [Tepidanaerobacter
sp. Re1]
gi|332698074|gb|AEE92531.1| DNA methylase N-4/N-6 domain protein [Tepidanaerobacter sp. Re1]
Length = 463
Score = 39.7 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 29 EKKTETIPESQDCISIHSIVPNPHNPRNYFES--EGLEDLCQSIKSHGIIQPLIVRAIDN 86
++K E I + + P +NPR + E L +S+++ G ++P++ +
Sbjct: 46 KQKKEAPILDIRKIPLEKLNPAKYNPRKDLKPGDAEYEKLKKSMETFGYVEPIV---WNK 102
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
I+ G +R + + +E+ ++ ++D + + N + + +
Sbjct: 103 QTGNIVGGHQRLKILQHQGNTEIECVVVDLDETEEKALNVALNKVSGEWDLPK 155
>gi|85373633|ref|YP_457695.1| putative DNA-binding protein [Erythrobacter litoralis HTCC2594]
gi|84786716|gb|ABC62898.1| putative DNA-binding protein [Erythrobacter litoralis HTCC2594]
Length = 657
Score = 39.7 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 90/231 (38%), Gaps = 13/231 (5%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR- 97
I + +VP+P N R + L I + G++Q L+VR G +++ AG RR
Sbjct: 2 IHSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRRL 61
Query: 98 ---FRAAKMASLSEVPVIIR---NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
A+ +L + + + E ++ EN QR +NP +EA + +I
Sbjct: 62 AALQALAEEGTLPDTHEVTCLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEAG 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
T D+ G + V LR+ L V E + + I+L A+ + SD A V
Sbjct: 122 A-TTEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTITLDMAKAYGAISDVERQAHV 180
Query: 212 IV--SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD---LEKKI 257
+ + + + + ++ YL +E+++
Sbjct: 181 YAELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIEREL 231
>gi|220916230|ref|YP_002491534.1| parB-like partition protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219954084|gb|ACL64468.1| parB-like partition protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 572
Score = 39.7 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 10/177 (5%)
Query: 22 NQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIV 81
+ + +++ T P + + + +I P+P N R L L +S++++GI Q I
Sbjct: 7 KSAARTVKRRPATKPIAVALLDVTAIDPSPEN-RQA--DVDLAPLVESVRTYGI-QMPIK 62
Query: 82 RAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLN----- 136
++I+ GERR+RAAK L +P I ++ ++ + ++EN QRKD +
Sbjct: 63 VRPKGDRFEIVFGERRWRAAKELGLDTIPATIEDLTDEEAQARRVLENTQRKDPHALEEA 122
Query: 137 -PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
E L + +T I + G+S +HV N L++ L +R+ E++
Sbjct: 123 EAYERLLAMRDRKGKPIHTPESIAKVAGRSPAHVYNRLKLTALAPELRKAFYAGELT 179
>gi|56550560|ref|YP_161626.1| ParB-like partition protein [Cupriavidus metallidurans CH34]
gi|291434859|ref|YP_003518240.1| chromosome partitioning protein ParB [Cupriavidus metallidurans
CH34]
gi|56410266|emb|CAI30148.1| hypothetical ParB-like partition protein [Cupriavidus metallidurans
CH34]
gi|93359089|gb|ABF13175.1| ParB involved in chromosome partitioning [Cupriavidus metallidurans
CH34]
Length = 332
Score = 39.7 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Query: 27 SPEKKTETIPESQDCISIHSIV--PNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI 84
E ++ + + I + P R + E +L ++++ + ++ P+IV
Sbjct: 57 RAELESARVSGGAVDVPIDQLHEVPGR---RRFMPPEKYVELRENLRHNKLVHPVIVCPR 113
Query: 85 DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
G ++I++G R A + + ++ + + + A N+ + DL E+
Sbjct: 114 PAGGFEIVSGHHRTDAYRELGRDHIRCVLGELSSDEADTGAFYANLMQSDLTDFEKFR 171
>gi|121583048|ref|YP_973489.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
gi|120596310|gb|ABM39747.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
Length = 334
Score = 39.7 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 79/241 (32%), Gaps = 18/241 (7%)
Query: 11 GRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
GRGL++ E + + I + NP N R ++ + SI
Sbjct: 52 GRGLSS--------------TVEMLALDVLSVDITKVRDNPRNARKLYDPAVVNQRATSI 97
Query: 71 KSHGIIQP-LIVRAIDNGLYKIIAGERRFRAAKMAS---LSEVPVIIRNVDNKSSLEIAI 126
+ G + P +N I+ G + A + + ++ ++ +
Sbjct: 98 RLDGQMTPAPACLDWENPGSYILIGGHYRKKALLQNGATHIQIKLLPAKNNFDLYRLSYA 157
Query: 127 VENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+ ++ + E + TQ++I ++VGK R+ + L +L L + ++
Sbjct: 158 ENDERQSGTPLDDALSWQELQEAGEVGTQDEIAALVGKPRTTINKTLALLNLSPGILSVL 217
Query: 187 RKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREK 246
++ + ++ + + + + +K ++K
Sbjct: 218 KETPDKFTLTAGYELSLMTSGFSETELIAIAQKVAAGDFSTRDLTRLREARKTKTPRKQK 277
Query: 247 E 247
E
Sbjct: 278 E 278
>gi|148654990|ref|YP_001275195.1| parB-like partition protein [Roseiflexus sp. RS-1]
gi|148567100|gb|ABQ89245.1| parB-like partition protein [Roseiflexus sp. RS-1]
Length = 273
Score = 39.7 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGL----EDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
+ IS+ + + N R EDL +SI+ G++ P+ V +G Y ++A
Sbjct: 4 NVREISLQDVDISEFNTRKNLADGQYDSTIEDLAKSIEKQGLLSPITVFQKPDGRYALVA 63
Query: 94 GERRFRAAKMASLSEVPVI-IRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG 152
G+RR A K S +P I ++ + + I++VENV R D+NP ++A+ ++ L+ +G
Sbjct: 64 GQRRLLACKQIGWSMIPAIVRDSMTDADATAISLVENVHRADMNPRDKAVAFKALLDRFG 123
Query: 153 YTQNDIGSIVGKSRSHVANILRILKLPSSVREMI 186
+ G S + +++L L ++E +
Sbjct: 124 -NFQTVSRETGVGVSTIRKYVQLLDLAPQLQEQL 156
>gi|91790863|ref|YP_551814.1| ParB family protein [Polaromonas sp. JS666]
gi|91700743|gb|ABE46916.1| ParB family protein [Polaromonas sp. JS666]
Length = 332
Score = 39.7 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 106/287 (36%), Gaps = 12/287 (4%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
V + + + + + ++ + + N R ++ ++ L+D+ +S+K G P
Sbjct: 42 PVVPRVLGAETDISALQIGQVYDVPLNKLQRSEVNARVFYSTDELDDMSRSLKDKGQDVP 101
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN---VQRKDL 135
I D + +I G++RF+AA ASL + V+I + S E +
Sbjct: 102 AIGYPKDGRIT-VIDGQKRFQAATNASLPTLQVLIVTPPSNESEEYEESRRINLHRSSQT 160
Query: 136 NPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMI--RKEEISL 193
+ + Q ++ + + S ++V+ + I +P + M+ + +L
Sbjct: 161 ALDDAVRWKAMIAKGTYANQAELAAKLEVSIANVSKTISITDIPERLLRMMSDHPQTRTL 220
Query: 194 GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
A + + + ++ ++ +D + + K + + E K
Sbjct: 221 SIAYEVSRLFNAEKFKDKAEEVEYLAQEVIIEIKNKDMVRNQVKSLIDSKLEGPKQRMRA 280
Query: 254 EKKISSKVGLNISIKHRNNKGQFCIKYETN-----EQL-KIICSLLG 294
E + S+K ++GQ + + +L + I +L
Sbjct: 281 EAVLVKYGDAKGSLKVFPSRGQLELSFSGLPEEKVSELKERIEQMLS 327
>gi|251777605|ref|ZP_04820525.1| ParB protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243081920|gb|EES47810.1| ParB protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 383
Score = 39.3 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
+ I S+VP+ +N ++ +E+L SIK +G++ L+VR I NG Y+II+GERR+
Sbjct: 22 KELDIDSLVPSKNN---FYGIREIEELAASIKENGLMHNLVVRDIGNGTYEIISGERRYT 78
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
A K +VP IR +++ + + I N+++++L P E+ G ++L + Y + +
Sbjct: 79 ALKKLGYEKVPCQIREINDLDAELMLIHANLEQRELTPTEKMEGIKRLENIYKQKRKNGE 138
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+ GK+R + L + + + + K+ I + + K
Sbjct: 139 KLEGKTRDLIGKDLGLSGVQVGRYKKVDKDLIPELKEKLDKEDITLTQAHTLSSLTKEEQ 198
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ + +++ + K+ K + K+ ++++
Sbjct: 199 KAIHDEIKDLNTKEHKLEVDILVQGIKQPIERKEDQEL 236
>gi|149184908|ref|ZP_01863225.1| hypothetical protein ED21_17682 [Erythrobacter sp. SD-21]
gi|148831019|gb|EDL49453.1| hypothetical protein ED21_17682 [Erythrobacter sp. SD-21]
Length = 663
Score = 39.3 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 13/231 (5%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
IS+ +VP+P N R + L I + G++Q L+VR G +++ AG RR
Sbjct: 2 IQSISLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRRL 61
Query: 99 RAAKMASL-------SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
A + + EV ++ + E ++ EN QR +NP +EA + +I
Sbjct: 62 AALQALAEEGTLSESHEVTCLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEAG 121
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
T D+ G + V LR+ L V E + + I+L A+ + SD A V
Sbjct: 122 A-TTEDVARRFGLTVRFVDGRLRLASLAPCVFEALAEGTITLDMAKAYGAISDVERQAHV 180
Query: 212 IV--SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD---LEKKI 257
+ + + + + ++ YL +E+++
Sbjct: 181 YAELQDAWYQSTPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIEREL 231
>gi|88707224|ref|ZP_01104912.1| conserved hypothetical protein [Congregibacter litoralis KT71]
gi|88698530|gb|EAQ95661.1| conserved hypothetical protein [Congregibacter litoralis KT71]
Length = 434
Score = 39.3 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 29/252 (11%), Positives = 70/252 (27%), Gaps = 15/252 (5%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKI 91
+ T+ + I I P P NPR ++ + + Y +
Sbjct: 15 SSTMTTQLIVLPISQIKPFPRNPRRSPHPARERIKASIRENGLDHALAVTQRPGTAHYVL 74
Query: 92 IAGERRFRAAKMASLSEVPVIIRNV---------DNKSSLEIAIVENVQRKDLNPLEEAL 142
AG + +E + L + EN R L+ +++A
Sbjct: 75 TAGGNTRLEVLVELYAETRDPRFAQIPCALTSWPGDVEILLAHVRENDLRDALSFVDKAC 134
Query: 143 GYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVST 202
+ + +++ S S + + + + + S + + +
Sbjct: 135 AVLECKALLDAERDEPLSQQALSDALMQHGYGLSQSMISQFTYAVERLLPVIPIALENGL 194
Query: 203 SDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVG 262
P + + S + + E + + DLE+ ++
Sbjct: 195 GRPQVQRIRHLDRSASRLWASCGLDTELPYDEAFLTLCRRYDGLDWSFDDLEEALA---- 250
Query: 263 LNISIKHRNNKG 274
+ I ++G
Sbjct: 251 --VEIAEGADRG 260
>gi|227357541|ref|ZP_03841894.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
gi|227162251|gb|EEI47255.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
Length = 549
Score = 39.3 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 16 ALI-GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
AL+ G S S + E +++ + PNP NPR E++ SI++ G
Sbjct: 12 ALLRGNPVSSPLSDNAHVNPVSEMPMILTLEQLQPNPDNPRQGRNP-RYEEIKSSIRARG 70
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
+ V + I + R ++ L +
Sbjct: 71 LDSVPKVTKAPGSEFYIFSDGGNTRYQILSELWQ 104
>gi|197286469|ref|YP_002152341.1| hypothetical protein PMI2639 [Proteus mirabilis HI4320]
gi|194683956|emb|CAR45206.1| conserved hypothetical protein [Proteus mirabilis HI4320]
gi|323957453|gb|EGB53173.1| hypothetical protein ERLG_01300 [Escherichia coli H263]
Length = 549
Score = 39.3 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 16 ALI-GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHG 74
AL+ G S S + E +++ + PNP NPR E++ SI++ G
Sbjct: 12 ALLRGNPVSSPLSDNAHVNPVSEMPMILTLEQLQPNPDNPRQGRNP-RYEEIKSSIRARG 70
Query: 75 IIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSE 108
+ V + I + R ++ L +
Sbjct: 71 LDSVPKVTKAPGSEFYIFSDGGNTRYQILSELWQ 104
>gi|261492146|ref|ZP_05988717.1| hypothetical protein COK_0584 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261312219|gb|EEY13351.1| hypothetical protein COK_0584 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 549
Score = 39.3 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 3/125 (2%)
Query: 1 MSNNYSK-RRLGRGLA-ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ + + + +GL + I S + + +++ + P HNPR
Sbjct: 1 MTKDEKRLAAIAKGLNVSPISNTAPSYQTATPTHYSSDVEYITVTLDKLRPYEHNPRKTR 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E + +SI+ G+ + + I+A R + L +
Sbjct: 61 NP-NFEMIKESIRRRGLDHKPNITRRPGEDFYIVADGGNTRIQALKELFTETKDPKFWSI 119
Query: 119 KSSLE 123
+
Sbjct: 120 SCQYK 124
>gi|296100768|ref|YP_003610914.1| hypothetical protein ECL_00399 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055227|gb|ADF59965.1| hypothetical protein ECL_00399 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 568
Score = 39.3 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDC----ISIHSIVPNPHNPRNYFESEGLEDLCQS 69
L A + + ++ + +P +++ + PNP NPR +++ S
Sbjct: 9 LGAAMLQRGKTPAQGDAVPAAVPLPVSEMAMVLTLDQLRPNPDNPRKSRNP-HFDEIKAS 67
Query: 70 IKSHGIIQPL-IVRAIDNGLYKIIAGERRFRAAKMASLSE 108
I++ G++Q + R D I + R + L +
Sbjct: 68 IRACGLVQVPKVTRDPDGEDVYIFSDGGNTRYQILCELWQ 107
>gi|170718030|ref|YP_001785070.1| hypothetical protein HSM_1750 [Haemophilus somnus 2336]
gi|168826159|gb|ACA31530.1| conserved hypothetical protein [Haemophilus somnus 2336]
Length = 548
Score = 38.9 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 3/125 (2%)
Query: 1 MSNNYSK-RRLGRGLA-ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ + + + +GL + I S + + +++ + P HNPR
Sbjct: 1 MTKDEKRLAAIAKGLNVSPISNTAPSYQTATPTHYSSDVEYITVTLDKLRPYEHNPRKTR 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E + +SI+ G+ + + IIA R + L +
Sbjct: 61 NP-NFEMIKESIRRRGLDHKPNITRRPGEDFYIIADGGNTRIQALKELFTETKDPKFWSI 119
Query: 119 KSSLE 123
+
Sbjct: 120 SCQYK 124
>gi|319938311|ref|ZP_08012708.1| chromosome partitioning protein parB [Coprobacillus sp. 29_1]
gi|319806604|gb|EFW03262.1| chromosome partitioning protein parB [Coprobacillus sp. 29_1]
Length = 307
Score = 38.9 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 76/141 (53%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +++ + E++T E I I I P +P E+E + ++ SIK +G++
Sbjct: 3 LPKLDDLFTTEEERTNDKLEKVIDIKISDIDDFPDHPFKVIENEDMFNMRDSIKENGVLV 62
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
P +VR +G Y++++G RR A+++A+ +P I+R++ + ++ I + N+QR+++ P
Sbjct: 63 PALVRQKPDGRYEMVSGHRRKYASQLANNETLPCIVRDLTDDEAVIIMVDSNLQREEILP 122
Query: 138 LEEALGYEQLISEYGYTQNDI 158
E+A Y+ + +
Sbjct: 123 SEKAFAYKMKLEALTHQGKRT 143
>gi|307823026|ref|ZP_07653256.1| hypothetical protein MettuDRAFT_1101 [Methylobacter tundripaludum
SV96]
gi|307735801|gb|EFO06648.1| hypothetical protein MettuDRAFT_1101 [Methylobacter tundripaludum
SV96]
Length = 111
Score = 38.9 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 7 KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISI--HSIV 48
KR LGRGL AL+ + + +T + Q + I
Sbjct: 5 KRGLGRGLEALLADDSAKEKKQPSQTMQAGDHQLTEDVGQDDIQ 48
>gi|254361541|ref|ZP_04977679.1| hypothetical protein MHA_1137 [Mannheimia haemolytica PHL213]
gi|153093059|gb|EDN74075.1| hypothetical protein MHA_1137 [Mannheimia haemolytica PHL213]
Length = 549
Score = 38.9 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 3/125 (2%)
Query: 1 MSNNYSK-RRLGRGLA-ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ + + + +GL + I S + + +++ + P HNPR
Sbjct: 1 MTKDEKRLAAIAKGLNVSPISNTAPSYQTATPTHYSSDIEYITVTLDKLRPYEHNPRKTR 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDN 118
E + +SI+ G+ + + IIA R + L +
Sbjct: 61 NP-NFEMIKESIRRRGLDHKPNITRRPGEDFYIIADGGNTRIQALKELFTETKDPKFWSI 119
Query: 119 KSSLE 123
+
Sbjct: 120 SCQYK 124
>gi|182417867|ref|ZP_02949180.1| partition protein [Clostridium butyricum 5521]
gi|237668698|ref|ZP_04528682.1| partition protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182378330|gb|EDT75862.1| partition protein [Clostridium butyricum 5521]
gi|237657046|gb|EEP54602.1| partition protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 381
Score = 38.9 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 122/287 (42%), Gaps = 17/287 (5%)
Query: 25 IDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAI 84
T + I +VP+ +N ++ +E+L +SIK +G++ L+VR
Sbjct: 9 ASRVNNINNTDDGFTQELDIDLLVPSKNN---FYGIRLVEELMESIKENGLMHNLVVRKK 65
Query: 85 DNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGY 144
D+G Y+I++GERRFRA K +VP I+ V + + + I N+Q+++LN E+ G
Sbjct: 66 DDGTYEILSGERRFRALKELGHKKVPCNIKEVSDLDAELLLIQANMQQRELNIQEKMEGI 125
Query: 145 EQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI----SLGHARTLV 200
+L Y + + GK+R + L + + + I K+ I ++ +
Sbjct: 126 RKLQEIYKEKRKSGEKLEGKTRDLIGKDLNMSGVQVGRYQKIDKDLIESLKEKLNSEDIT 185
Query: 201 STSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSK 260
T + +++ + ++L ++ ++ + + K+ +L ++ SK
Sbjct: 186 VTQAHTLSSLTESEQEIISDEIKDLNCKEHKEEVETLINGIKQPVENKHDKELIDEMYSK 245
Query: 261 VGLNISI---------KHRNNKGQFCIKYETNE-QLKIICSLLGEND 297
I K + ++ E ++ + ++ +++
Sbjct: 246 SNSKSDIVVSDCAKNADETEQKKEIKTEFNEIENKIDELKEMIKQSE 292
>gi|329768306|ref|ZP_08259804.1| hypothetical protein HMPREF0428_01501 [Gemella haemolysans M341]
gi|328837279|gb|EGF86914.1| hypothetical protein HMPREF0428_01501 [Gemella haemolysans M341]
Length = 1880
Score = 38.9 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 25/280 (8%), Positives = 73/280 (26%), Gaps = 15/280 (5%)
Query: 17 LIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF--ESEGLED-LCQSIKSH 73
++ + + S ++ + + +I +P NPR F + + + + S K
Sbjct: 89 ILQDASGSFENTIGNVKAALSQLTT-PVDAINYDPDNPRLVFTGDPDTTDRVMVASFKDL 147
Query: 74 GIIQPLIVRAIDNGLYKIIA-GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
+ + + + A G + I + ++ +
Sbjct: 148 DGYRLYDKQQQPSASSYVDASGRNYDPEKRTWYSYSGNDIYWWNSSINNWVTKYEADTNF 207
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
G + + T + + + + + +
Sbjct: 208 TGDYQEGTWDGSKYTLESSNLTNDKTAIHNFINSITTRGGTPTVPAIEDIINKYNSVKGN 267
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
+ + R V +A + V + ++ +K + E +
Sbjct: 268 MNNDRKTVFLLITDGVANGVRKDGKVVIEYSGKRNDKLLEKYGIDPLSYQQMEGSSNILA 327
Query: 253 LEKKISSKVGLNISIKHR---NNKGQFCIKYETNEQLKII 289
++ + K + KG + + E L +
Sbjct: 328 RADEL-----TKVGAKLKQAVGEKGSVVVGF--WEDLNKL 360
>gi|153011905|ref|YP_001373118.1| parB-like partition protein [Ochrobactrum anthropi ATCC 49188]
gi|151563793|gb|ABS17289.1| parB-like partition protein [Ochrobactrum anthropi ATCC 49188]
Length = 654
Score = 38.9 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII--QPLIVRAIDNG-L 88
T T + ++++ + +P N R + EG+E+L +++S G Q L+VR D
Sbjct: 6 TNTNKPATIIVALNKLDRDPKNVRKTYRKEGIEELAANLRSDGYQPLQNLVVRKGDKKGR 65
Query: 89 YKIIAGERRFRAAKMASL-----SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
Y + AGERR A + ++ V + + + I++ EN R+++NP+++
Sbjct: 66 YFVTAGERRRLALLSLAEAGEIAADFAVECKERAAEDATAISLAENAMREEMNPVDQYEA 125
Query: 144 YEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS 203
++ + E G DI + S + V L + ++ + ++ R EEI + +
Sbjct: 126 FKAMADE-GKDIADIAARFAISETVVRQRLALARVAPELLQLFRDEEIGYSQLKAFTICN 184
Query: 204 DPLSL 208
D
Sbjct: 185 DHKRQ 189
>gi|121583303|ref|YP_973739.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
gi|120596561|gb|ABM39997.1| parB-like partition proteins [Polaromonas naphthalenivorans CJ2]
Length = 331
Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 77/243 (31%), Gaps = 10/243 (4%)
Query: 14 LAALIGEVNQSID----SPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQS 69
L A E ++ + S + I+IH I PNP PR + + +
Sbjct: 32 LDA-FSETSEPVAILAPSVVPTAFNSGRNLQSINIHLIDPNPLAPREVYTPQMILSRADD 90
Query: 70 IKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSE--VPVIIRNVDNKSSLEIA 125
++ G P+ V + + I G R A + + + + I + + S
Sbjct: 91 LRVQGQHDPIHVIPNPDASGRFIICDGWTRVLACREHKVFDSLLAEIHNELSLEESAWFG 150
Query: 126 IVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREM 185
+N R L+ A+ YE+LI+ +I S++ ++ KLP V E+
Sbjct: 151 YEQNECRAMHCDLDRAMFYEKLIAAGE-PAVEIARRAKLSKTMMSFYRAYAKLPEDVMEI 209
Query: 186 IRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSRE 245
IR+ G E+ + + S+
Sbjct: 210 IRQNPGKFGANAAYQLHKLHEKCGIRKAVALAGKYAVEDQTVRWLTNQAQALLSPTASKS 269
Query: 246 KEK 248
Sbjct: 270 IAP 272
>gi|325953766|ref|YP_004237426.1| hypothetical protein Weevi_0122 [Weeksella virosa DSM 16922]
gi|323436384|gb|ADX66848.1| hypothetical protein Weevi_0122 [Weeksella virosa DSM 16922]
Length = 398
Score = 38.9 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 81/286 (28%), Gaps = 6/286 (2%)
Query: 14 LAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSH 73
++++I + + + S K + + + I N R L +
Sbjct: 1 MSSIINKTSSTTFSLSKSEKNNVNKVTKLMVDLIRRNKRLWRKEINDWQSARLARYNVDQ 60
Query: 74 GIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRK 133
+QPL D + + G R + + + I ++K + I +
Sbjct: 61 PNLQPLDEVYDDIMMDGHLTGITENRTLRTTNKDYIFSIDGVKNDKLTDFIKNKTWFEET 120
Query: 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISL 193
LI + + +I + R + ++K I +
Sbjct: 121 IHMAHNSVYRGHSLIWIKDFDKGNIKKVELVPRGLIVPEHNLMKYQYDTFSGIDFSTVET 180
Query: 194 GHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDL 253
L A K + + +E + KI S + + D
Sbjct: 181 LIYAQFYDNVGLLEKAAPYTILKRHSWGSWDEFEELYGVPIRIAKIASQSEVVKNEVADW 240
Query: 254 EKKISSK------VGLNISIKHRNNKGQFCIKYETNEQLKIICSLL 293
++ S +G + IK + F + Y E L S L
Sbjct: 241 LAEMGSAAYAVFPLGTEVDIKENSKTDAFRVFYMKIEALDKELSKL 286
>gi|304311398|ref|YP_003810996.1| hypothetical protein HDN1F_17640 [gamma proteobacterium HdN1]
gi|304313169|ref|YP_003812767.1| hypothetical protein HDN1F_35550 [gamma proteobacterium HdN1]
gi|301797131|emb|CBL45347.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
gi|301798902|emb|CBL47138.1| Hypothetical protein HDN1F_35550 [gamma proteobacterium HdN1]
Length = 589
Score = 38.5 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 64/195 (32%), Gaps = 24/195 (12%)
Query: 1 MSNNYS------KRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNP 54
MS + ++R+G + + S +++ S + + I NP
Sbjct: 1 MSKKVTNFRDGIRKRMG-------EPPSATFLSDMINQQSMRSSMLLLHLDQIHRYDRNP 53
Query: 55 RNYFESEGLEDLCQSIKSHGIIQP-LIVRAIDNGLYKIIAGERRFRAAKMASLSEV---- 109
R F + E++ +SI+ GI QP + + Y + G A E
Sbjct: 54 RK-FGNADYEEIRESIRHRGIDQPLCVTQRPGEQHYTLKKGAGTRLQALQELWQETGDRR 112
Query: 110 -----PVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+ D +EN++R ++ +E A Y +L + + S+
Sbjct: 113 FYEIECIFEPYRDELDIFVGHGIENLKRSQMSFIETAQFYMELYQLHEDIEGRELSMREA 172
Query: 165 SRSHVANILRILKLP 179
A+ +
Sbjct: 173 CEKINADGFSVDPSR 187
>gi|257792152|ref|YP_003182758.1| ParB domain-containing protein nuclease [Eggerthella lenta DSM
2243]
gi|317488771|ref|ZP_07947305.1| ParB-like nuclease domain-containing protein [Eggerthella sp.
1_3_56FAA]
gi|325833002|ref|ZP_08165629.1| ParB-like protein [Eggerthella sp. HGA1]
gi|257476049|gb|ACV56369.1| ParB domain protein nuclease [Eggerthella lenta DSM 2243]
gi|316912141|gb|EFV33716.1| ParB-like nuclease domain-containing protein [Eggerthella sp.
1_3_56FAA]
gi|325485719|gb|EGC88184.1| ParB-like protein [Eggerthella sp. HGA1]
Length = 284
Score = 38.5 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 34 TIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
T P + + SI +P N + +++L SI+S G+ Q +VR + +G Y++IA
Sbjct: 2 TTPYQTLALPVDSIQSHPENDFT-MDESEMQELVASIRSEGLGQLPLVRKLPDGAYQMIA 60
Query: 94 GERR 97
G RR
Sbjct: 61 GHRR 64
>gi|29347581|ref|NP_811084.1| putative anti-sigma factor [Bacteroides thetaiotaomicron VPI-5482]
gi|253572041|ref|ZP_04849445.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|29339482|gb|AAO77278.1| putative anti-sigma factor [Bacteroides thetaiotaomicron VPI-5482]
gi|251838221|gb|EES66308.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 290
Score = 38.5 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 247 EKYLTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL-GENDFEY 300
+ L ++ +++S+ G I I + ++ E L I S+L F Y
Sbjct: 223 DLPLQEIARELSNSFGTTIHIADSTLRNYRITARFRNGEDLDAILSVLHNAGYFNY 278
>gi|325926171|ref|ZP_08187530.1| pyruvate dehydrogenase complex dihydrolipoamide
acetyltransferase, long form [Xanthomonas perforans
91-118]
gi|325543418|gb|EGD14842.1| pyruvate dehydrogenase complex dihydrolipoamide
acetyltransferase, long form [Xanthomonas perforans
91-118]
Length = 524
Score = 38.5 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Query: 1 MSNNY--SKRRLGRGLAALI 18
MS KR LGRGL AL+
Sbjct: 1 MSKPPLAKKRGLGRGLEALL 20
>gi|239934243|ref|ZP_04691196.1| putative plasmid partitioning protein, parb2 [Streptomyces
ghanaensis ATCC 14672]
gi|291442690|ref|ZP_06582080.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291345585|gb|EFE72541.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 371
Score = 38.5 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 17/207 (8%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR---NYFES--EGLEDLCQSIKSH 73
ID E + + + I NP NPR + + + ++ I
Sbjct: 21 SSRRNLIDKTIAGEEATAAAITELPVTLISDNPDNPRNHLRNLDETVQSVREVGIIIPIA 80
Query: 74 GIIQPLIVRAIDNG--------LYKIIAGERRFRAAKMASLSEVPVIIRN---VDNKSSL 122
+R + Y ++ G RR AA+ ++ +PV + N ++S L
Sbjct: 81 VATVDAYLRNRPDRADDLDDGAQYIVVDGHRRLEAARRVGMATIPVRVDNGRVATDESLL 140
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E A V N R D+ LEEA + L+ YG +Q +G ++ +++ L +LKL +
Sbjct: 141 EAAFVANYHRDDMTDLEEAHALKTLVDYYG-SQTKAAKRLGIPQNTISSKLSLLKLTPEL 199
Query: 183 REMIRKEEISLGHARTLVSTSDPLSLA 209
++ + + H R L S A
Sbjct: 200 QKDLVTGVRKVEHVRNLGKLSPEEQKA 226
>gi|154419266|ref|XP_001582650.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121916886|gb|EAY21664.1| hypothetical protein TVAG_014310 [Trichomonas vaginalis G3]
Length = 2427
Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 77/253 (30%), Gaps = 9/253 (3%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESE---GLEDLCQSIK 71
++LI ++ +S ++ + + +S C I + PR F+ +
Sbjct: 769 SSLIKDLEKSEEAEQSILGEVNDSTKCFIAEEIQESKWQPRKKFDLSFLPKFKTKISEFF 828
Query: 72 SHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
D L I + SL E+ +I + +I + +
Sbjct: 829 LEWKNNENNAVYCDIVLPNIKMSCIPKSLSFSLSLPEMSMISGQEKSVFIQQIKMFMTLS 888
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIV---GKSRSHVANILRILKLPSSVREMIRK 188
D + N + I S +V K S +
Sbjct: 889 TYDKIWSMNKNDIYDFNFDTNDKNNFLNKITVFVDISDMNVVYDHLTAKSYVSFLNEMMP 948
Query: 189 EEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEK 248
L V ++ P+ L+ + +M++++ + + + GS K
Sbjct: 949 SIEKLMPKEFDVKSNIPVDLSFGLNKFQMNLKEIDFGI-LTNGVAFSMHGKEIGSEVKSF 1007
Query: 249 YLTDLEKKISSKV 261
+ L+ KI SK+
Sbjct: 1008 QI--LQNKIKSKI 1018
>gi|294502403|ref|YP_003566465.1| hypothetical protein YPZ3_0293 [Yersinia pestis Z176003]
gi|294352862|gb|ADE63203.1| hypothetical protein YPZ3_0293 [Yersinia pestis Z176003]
Length = 575
Score = 38.5 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 68/255 (26%), Gaps = 17/255 (6%)
Query: 15 AALIGEVNQSIDSPEKKTETIPESQDCISI----HSIVPNPHNPRNYFESEGLEDLCQSI 70
+AL+ + + + + + + PNP NPR +D+ SI
Sbjct: 13 SALLQQGKTAAGTQPLDPVLAETPVSEMPLVLTLDEVNPNPDNPRTTRNP-KYDDIKASI 71
Query: 71 KSHGIIQPLIVRAIDNGL---YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI--- 124
+ G+ V Y G A E +
Sbjct: 72 RVRGLDTVPKVTRDPERPELGYFFSDGGNTRYAILSELWQETGEERFYRFSCVFKPWPGR 131
Query: 125 ------AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKL 178
+ EN R DL +E+A G +Q + + S+ S + +
Sbjct: 132 LSCVIGHLAENEVRGDLTFIEKAFGIQQARTLFEEQLGKTVSLRELSTLLGESGYPVHSS 191
Query: 179 PSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK 238
S E + A P + + + +++ + K
Sbjct: 192 NISRMEDTVQYLHPYMPALLESGLGRPQIQHLLALRAHAEKTWLDFVIEGGSQEAFKSVF 251
Query: 239 IFEGSREKEKYLTDL 253
S+ + L L
Sbjct: 252 GRVCSQFNDPELYSL 266
>gi|295100254|emb|CBK97799.1| Predicted transcriptional regulators [Faecalibacterium prausnitzii
L2-6]
Length = 518
Score = 38.5 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 35/185 (18%)
Query: 37 ESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA------------- 83
I I + P+P NPR L +L SIK +G+ Q L V
Sbjct: 2 ADITYIPIRQLYPHPDNPRKEL--GDLSELAASIKENGVYQNLTVIPGHYLNSREYIAKC 59
Query: 84 -------------------IDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEI 124
+ Y II G RR AA+ A L E+P I +D + ++
Sbjct: 60 VDEGGDAAAAAAAWTPKAVWSSEDYTIIIGHRRAAAAQQAGLYELPCAIVEMDEREQMQT 119
Query: 125 AIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVRE 184
++EN+QR DL E+A G++ ++ +G T I G S+S + +++L+L +
Sbjct: 120 MMIENMQRSDLTVYEQAQGFQMMMD-FGQTVEQISDKSGFSQSTIRRRIKLLELNRDSFK 178
Query: 185 MIRKE 189
K
Sbjct: 179 KAEKR 183
>gi|257790690|ref|YP_003181296.1| ParB domain-containing protein nuclease [Eggerthella lenta DSM
2243]
gi|257474587|gb|ACV54907.1| ParB domain protein nuclease [Eggerthella lenta DSM 2243]
Length = 307
Score = 38.5 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ I++I NP N + +E L SI+ G+ +VR + +GL+++I+G RR
Sbjct: 29 VAELDINAIEDNPENAVYSMDEASIEALAASIEKDGLTDLPLVRKLPDGLWQLISGHRRR 88
>gi|282851548|ref|ZP_06260913.1| ParB-like protein [Lactobacillus gasseri 224-1]
gi|282557516|gb|EFB63113.1| ParB-like protein [Lactobacillus gasseri 224-1]
Length = 325
Score = 38.5 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ +SI I P +NPRN + ++ + SIK G QP++V IIAG R
Sbjct: 2 KVETVSIDKIKPYENNPRN--NDDAVDAVANSIKEFGWQQPIVVDNGGV----IIAGHTR 55
Query: 98 FRAAK 102
++AAK
Sbjct: 56 YKAAK 60
>gi|251792755|ref|YP_003007481.1| hypothetical protein NT05HA_1022 [Aggregatibacter aphrophilus
NJ8700]
gi|247534148|gb|ACS97394.1| conserved hypothetical protein [Aggregatibacter aphrophilus NJ8700]
Length = 580
Score = 38.1 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 5/110 (4%)
Query: 2 SNNYSKRRL---GRGLAAL-IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNY 57
+N +K +L +GL I + + + +++ + P HNPR
Sbjct: 9 TNKKNKAQLDAIAKGLNVQPISNTSTTYQTAAATNYPTQGQYITVTLDKLRPYEHNPRKT 68
Query: 58 FESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLS 107
E + +SI+ G+ + Y IIA R + L
Sbjct: 69 RNP-NFEIIKESIRRRGLDHKPNITQRPGEPYYIIADGGNTRIQALKELF 117
>gi|188590306|ref|YP_001921515.1| ParB protein [Clostridium botulinum E3 str. Alaska E43]
gi|188500587|gb|ACD53723.1| ParB protein [Clostridium botulinum E3 str. Alaska E43]
Length = 383
Score = 38.1 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 102/218 (46%), Gaps = 3/218 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
+ I+S+VP+ +N ++ +E+L SI+ +G++ L+VR I NG Y+II+GERR+
Sbjct: 22 KELDINSLVPSKNN---FYGIREIEELAASIQENGLMHNLVVRDIGNGTYEIISGERRYT 78
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIG 159
A K +VP IR++++ + + I N+ ++L P E+ G ++L + Y + +
Sbjct: 79 ALKKLGYEKVPCQIRDINDLDAELMLIHANLDSRELTPTEKMEGIKRLENIYKQKRKNGE 138
Query: 160 SIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSV 219
+ GK+R + L + + + + K+ I + + K
Sbjct: 139 KLEGKTRDLIGKDLGLSGVQVGRYKKVDKDLIPELKEKLNKEDITLTQAHTLSSLTKEEQ 198
Query: 220 RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
+ + +++ + K K + K+ +K++
Sbjct: 199 QIIHDEIKDLNTKDHKLEVDILVQGIKQPVDRKEDKEL 236
>gi|38638341|ref|NP_943573.1| putative protein involved in partition [Listonella anguillarum]
gi|29825770|gb|AAO92393.1| plasmid replication/partition protein [Listonella anguillarum]
gi|38155248|gb|AAR12547.1| putative protein involved in partition [Listonella anguillarum 775]
Length = 323
Score = 38.1 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 7/190 (3%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS ++ L + A+ I E + D + + + I ++ + R F
Sbjct: 1 MSKKAFEKALQKENASKIEEFSFLGDDDSSEIHSA-GTVLRIP-KQLIYSIKQVRTKFRG 58
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKS 120
+E+L QSI++ G QP+ + A D Y+I GERR+RAA + I
Sbjct: 59 --IEELSQSIETEGQHQPITIYARDGKGYRIHQGERRWRAAGINDSITHLDCIVR--EGG 114
Query: 121 SLEIAIVENVQRKDLNPLEEALGYEQLISEYGY-TQNDIGSIVGKSRSHVANILRILKLP 179
++ I EN+QR DL+P + A ++ + QN I + KS + V L++L++P
Sbjct: 115 TIWGQITENIQRDDLDPFDIAFKLKEEMDNDATLDQNAIAEKLSKSPAWVTQHLKLLQVP 174
Query: 180 SSVREMIRKE 189
+ + E
Sbjct: 175 DYIFQAYDSE 184
>gi|270265402|ref|ZP_06193662.1| chromosome partitioning protein ParB [Serratia odorifera 4Rx13]
gi|270040657|gb|EFA13761.1| chromosome partitioning protein ParB [Serratia odorifera 4Rx13]
Length = 385
Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 20 EVNQSIDSPEKKTETIPESQDCI-SIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQP 78
E+ + E + I D + +I + P F+ E ++ + Q+ GI+ P
Sbjct: 43 ELKVNRMQEEPAGQIIRVGIDEVYAIEQVRPEED-----FDEETIDGMKQTYGYVGILTP 97
Query: 79 LIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVI--IRNVDNKSSLEIAIVENVQRKDLN 136
D Y+I GE R+R+AK + + ++K + ++EN+ + L
Sbjct: 98 PRCFPKDKRGYRIWMGETRWRSAKAKGDLYIDIYVGTPPENDKKRIYGQLIENLHQSGLK 157
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLP 179
PL A+ + L +G TQ + I+GK ++ ++ +R++ P
Sbjct: 158 PLATAIQLQALRDVHGETQEAMSRILGKPKAFISKHMRLIDAP 200
>gi|229827076|ref|ZP_04453145.1| hypothetical protein GCWU000182_02460 [Abiotrophia defectiva ATCC
49176]
gi|229788694|gb|EEP24808.1| hypothetical protein GCWU000182_02460 [Abiotrophia defectiva ATCC
49176]
Length = 327
Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 119/310 (38%), Gaps = 27/310 (8%)
Query: 13 GLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKS 72
G+ ++ ++ +SI+ ++P NP +E E LE++ +SI
Sbjct: 15 GIDSIFRSGANDTGMSDENE----AGTTEVSIYELIPYSRNPFKLYEGERLEEMEKSILR 70
Query: 73 HGIIQPLIVRAID-NGLYKIIAGERRFRAAKMASLSEVPV------IIRNVDNKSSLEIA 125
+GI+QP++VR I+ + Y+I+AG R+ AK+ S ++ I+R +D++++ I
Sbjct: 71 YGILQPILVREIEGSSKYEILAGHNRYNVAKILSETDKRFLKVPVRILRGIDDETAELIV 130
Query: 126 IVENVQRKD-----LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPS 180
N+ ++ + + + + D+ + V + I
Sbjct: 131 SESNMMQRSLNDLLPSEKAFVIATYYKAEKRQGKRTDLINKVSEILGQENTEEIISGKEK 190
Query: 181 SVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ E +++ + + ++ + ++ + K ++
Sbjct: 191 AAIEFNLSPMSIARYSKIDTLDENLKEKLNEGLIDLVAAYNLSFRTADEQSVICKYQEEK 250
Query: 241 EGS--REKEKYLTDL----EKKISSKVGLNISIKHRNNKGQFCIKY---ETNEQLKIIC- 290
+ R+K + L E+ + K+ N+ + KY + +++ +I
Sbjct: 251 KSKIDRKKSLEIKKLSEVTEENL-DKIFTKNKSSSDNSIDKTVKKYFPDKNKDEIILILN 309
Query: 291 SLLGENDFEY 300
LL + EY
Sbjct: 310 ELLKKYSEEY 319
>gi|30795069|ref|NP_851519.1| plasmid partitioning protein, ParB [Streptomyces rochei]
gi|30698442|dbj|BAC76555.1| probable plasmid partitioning protein, ParB [Streptomyces rochei]
Length = 409
Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
I Q++ + + + +H I PNP NPR+ L DL S+K+HG Q
Sbjct: 19 ISARRQAVAAATGVPTEGVAAPTELPVHRISPNPDNPRSAL--GDLTDLVGSLKTHGQKQ 76
Query: 78 PLIVRAIDNG 87
+ V D
Sbjct: 77 AITVMNRDAY 86
>gi|156069873|gb|ABU44875.1| ParB [Aggregatibacter actinomycetemcomitans]
Length = 580
Score = 38.1 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 2/97 (2%)
Query: 12 RGLAAL-IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSI 70
+GL I + + + +++ + P HNPR E + +SI
Sbjct: 22 KGLNVQPISNTSTTYQTAAAANYPTQGQYITVTLDKLRPYEHNPRKTRNP-NFEIIKESI 80
Query: 71 KSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLS 107
+ G+ + Y IIA R + L
Sbjct: 81 RRRGLDHKPNITQRPGEPYYIIADGGNTRIQALKELF 117
>gi|2120961|pir||S60671 ParB-like partition protein - Alcaligenes eutrophus plasmid MOL28
Length = 331
Score = 38.1 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 92/279 (32%), Gaps = 30/279 (10%)
Query: 20 EVNQSIDSPEKKTETIPESQDCISIHSIV--PNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ N+ + + I + P R + E +L ++++ + ++
Sbjct: 49 QANEIAQLRAELESARVSGAVDVPIDQLHEVPGR---RRFMPPEKYVELRENLRHNKLVH 105
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN-VDNKSSLEIAIVENVQRKDLN 136
P+IV G ++I++G R A + + ++ +++ +Q +
Sbjct: 106 PVIVCPRPAGGFEIVSGHHRTDAYRELGRDHIRCVLGELSSDEADTGAFYANLMQSDLTD 165
Query: 137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHA 196
+ E L+ TQ I G S ++ IL LP V ++ LG
Sbjct: 166 FEKFRKFDELLLRTPDKTQAAIAEQAGVPVSTLSEILSFRNLPPEVLSLLDSRPDLLGS- 224
Query: 197 RTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKK 256
+ L+ A V + L +++ ++++ + +
Sbjct: 225 ----NAGAELARATKDGRGDRVVEAVKLLAEKKIDQQQAVRMTKAEQVKTRPAA------ 274
Query: 257 ISSKVGLN--------ISIKHRNNKGQFCIKYETNEQLK 287
S+ + + I + I++ + E+ +
Sbjct: 275 -STGFKIKAGKATWCDVRIAKK----VMRIEFRSEEEAE 308
>gi|153791479|ref|NP_001093522.1| hypothetical protein LOC793688 [Danio rerio]
gi|292613130|ref|XP_001923659.2| PREDICTED: hypothetical protein LOC100150789 [Danio rerio]
gi|292617118|ref|XP_001922919.2| PREDICTED: hypothetical protein LOC100150626 [Danio rerio]
gi|148725914|emb|CAN88404.1| novel protein [Danio rerio]
gi|159571217|emb|CAP19496.1| novel protein [Danio rerio]
Length = 445
Score = 38.1 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 29/260 (11%), Positives = 66/260 (25%), Gaps = 12/260 (4%)
Query: 45 HSIVPNPH-NPR-NYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAK 102
+ I NPR F + S K P I N + +G+
Sbjct: 98 NKIKRKKRPNPRFIDFSENDSDQDITSHKLRLAAAPPIDFTAMNASANLASGQTDSGCHV 157
Query: 103 MASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIV 162
+ + Q N + Y + Q+
Sbjct: 158 NPKRGHIEHHGTSHVQHQECWDPAYLAHQNTQYNETHQVTAYRAHEDTHEGHQDRHHQAH 217
Query: 163 GKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDT 222
+L + + + + L + S +
Sbjct: 218 QDRHHQSHQDTYRAQLDTRYSPHLDPQYRAHQSTYYRDHQGTLSELVNERYMDQTSSQTA 277
Query: 223 EELVQEQDNKKEKRK-KIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKY- 280
LV + + ++ KI + +++ + +++ G I I + +
Sbjct: 278 SALVPSELSPFKRNVLKILLEIKNEQREQRAMIQQLQ---GAPIPIPLQAES---SFAFP 331
Query: 281 -ETNEQLKIICSLLGENDFE 299
++ + + +L +ND E
Sbjct: 332 AQSLDDFDALEKML-QNDAE 350
>gi|85707387|ref|ZP_01038469.1| ParB-like partition protein [Roseovarius sp. 217]
gi|85668119|gb|EAQ22998.1| ParB-like partition protein [Roseovarius sp. 217]
Length = 321
Score = 38.1 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 39/277 (14%), Positives = 86/277 (31%), Gaps = 22/277 (7%)
Query: 32 TETIPESQDCISIHSIVPNPHNPRNYFE-SEGLEDLCQSIKSHGIIQPLIVRAIDNGLYK 90
+ S IS I + R + + + +L +SI G + P+++
Sbjct: 6 QDAAQSSIQEISTDLIDDSEFQDRLALDNEDDIRELAESIDKQGQLIPILLSPEGGRYRI 65
Query: 91 IIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE 150
I RR AA +IR++D ++ EN RKDL+ +E+AL + + + +
Sbjct: 66 IYG--RRRLAALRLIGKPAKALIRSLDEDQAILAQGQENSFRKDLSWIEKAL-FARSLID 122
Query: 151 YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQ 210
G + + + + ++ L + + A
Sbjct: 123 SGKDEGLVCDALNIDQKARKAGDKLTGLARMKQVTSCIPTELIQKIGAAPGVGRDRWYAA 182
Query: 211 VIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISS----------- 259
+ + E + + + ++ E +
Sbjct: 183 AKSYESLGFSGDEGFPAGNREFHDALMEPRGSGKTSDERFAIFEGLLKQHKPPAPSAIKT 242
Query: 260 KVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGEN 296
K+G+ + + RN I + + + + EN
Sbjct: 243 KLGM-VKVTKRN----VIITVKNGDD--GLHKWISEN 272
>gi|238923648|ref|YP_002937164.1| chromosome partitioning protein, ParB family [Eubacterium rectale
ATCC 33656]
gi|238875323|gb|ACR75030.1| chromosome partitioning protein, ParB family [Eubacterium rectale
ATCC 33656]
Length = 495
Score = 38.1 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 36 PESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA 93
E + + +I P+P NPR + + +L SIK GI+Q L V +A
Sbjct: 3 NEELIMLPVSAIYPHPDNPRK--DVGDVTELAASIKKRGILQNLTVMPGHWLTMDEMA 58
>gi|309390054|gb|ADO77934.1| parB-like partition protein [Halanaerobium praevalens DSM 2228]
Length = 308
Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I I SI P R F + ++ L +SI G +QP++V+ + +IAGERR R
Sbjct: 4 KEIKITSIDSRPDQVRTDFSEKRIDSLAKSIAEVGQLQPIVVQKKSDRYL-LIAGERRLR 62
Query: 100 AAKMASLSEVPVII--RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
A K ++ +I V + +I ++EN+QR+DLNPLE A+ + I T+ +
Sbjct: 63 AVKKDKKEKIAAVILEEEVSPEKFRQIQLIENLQRQDLNPLERAISINKFIEANDLTKKE 122
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVST 202
+G +R+ + L IL + ++ + K + + + ++
Sbjct: 123 AAQKLGVARTTLTLWLNILDMKEKYQKEVLKADSPITLSHLSLAH 167
>gi|24214538|ref|NP_712019.1| chromosome-partitioning protein ParB [Leptospira interrogans
serovar Lai str. 56601]
gi|24195499|gb|AAN49037.1| probable chromosome-partitioning protein parB [Leptospira
interrogans serovar Lai str. 56601]
Length = 293
Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 8 RRLGRGLAALIGEVNQSIDSPEK------KTETIPESQDCISIHSIVPNPHNPRNYFESE 61
++LG LI NQ+ + I I SI + NPR F
Sbjct: 2 KKLGFNAKNLISTENQTPKKKDSYFQGSLTNLLGSNEITEILIDSIT-SIDNPRTNFNFS 60
Query: 62 GLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKM 103
+++L SI++HG++Q I Y +IAGERR RA +
Sbjct: 61 SIKELAASIEAHGLLQ-PITVRKKGEKYDLIAGERRLRAYQF 101
>gi|158320952|ref|YP_001513459.1| nuclease [Alkaliphilus oremlandii OhILAs]
gi|158141151|gb|ABW19463.1| ParB domain protein nuclease [Alkaliphilus oremlandii OhILAs]
Length = 335
Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 97/255 (38%), Gaps = 9/255 (3%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
I +N + ET I ++ ++P ++P +E + LED+ +SIK HG+I
Sbjct: 7 IININDLFSDEDDILETSDSGIKEIYLYKLIPFKNHPFKLYEGQRLEDMVESIKEHGVIT 66
Query: 78 PLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIRNV-DNKSSLEIAIVENVQRKD 134
P+IVR + Y+I++G R AAK+ L ++P +I+ ++ ++ I N+ ++
Sbjct: 67 PIIVRPMPIQEEQYEILSGHNRANAAKIVGLEKIPAVIKEGLTDEEAMLIVTETNLIQRS 126
Query: 135 LNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLG 194
+ L + ++ GK + + + +
Sbjct: 127 FSELS-----HSEKARIIAERHKAIKQQGKRTDLINEVEMLSNTDGCAENPTFVQFDKKM 181
Query: 195 HARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLE 254
+ + LS A + K+ + + + + ++ S K +E
Sbjct: 182 KSNEKLGEKYDLSPATISRYLKIDMLIDKLKTRLDNKEEIPLMAAVNLSFLKVDEQEIIE 241
Query: 255 KKISSKVGLNISIKH 269
+ K I IK
Sbjct: 242 GILKEK-NFKIDIKK 255
>gi|153811689|ref|ZP_01964357.1| hypothetical protein RUMOBE_02082 [Ruminococcus obeum ATCC 29174]
gi|149832092|gb|EDM87177.1| hypothetical protein RUMOBE_02082 [Ruminococcus obeum ATCC 29174]
Length = 321
Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 99/250 (39%), Gaps = 20/250 (8%)
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMA 104
+ P +P + + + L +SI+ +GI+ PLIVR + +G Y+II+G RR AA+
Sbjct: 53 ERLRPFKEHPFQVKDDKEMFLLQESIEKYGILNPLIVRPVPDGYYEIISGHRRKHAAEKL 112
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+VPVIIR + S+ + N+ R+ ++ E+A Y+ S V
Sbjct: 113 GYRKVPVIIRVLSEDDSILSMVDSNLHRERISYSEKAFAYKLKNDVLKRKSGRKKSQVDH 172
Query: 165 SRSHVANILRIL----KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
I I P V+ I ++ + L A I + + +
Sbjct: 173 KTPRKRAIEIISEDCGDSPKQVQRYISLTKLIPEMLQKLDDEIISFCPAVEIAALNETEQ 232
Query: 221 DTEELVQEQDNKKE---KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
+ E + ++I + S+EK+ L +E+ + KG+
Sbjct: 233 KELLVAMEYAQAIPSLSQAQRIRQLSKEKQLSLEKMEEIMCEV-----------KKGEIT 281
Query: 278 -IKYETNEQL 286
+ + EQL
Sbjct: 282 RVAFTN-EQL 290
>gi|197303481|ref|ZP_03168520.1| hypothetical protein RUMLAC_02203 [Ruminococcus lactaris ATCC
29176]
gi|197297479|gb|EDY32040.1| hypothetical protein RUMLAC_02203 [Ruminococcus lactaris ATCC
29176]
Length = 318
Score = 38.1 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
M N ++ G + L+ ++ + +T + I I P +P + +E
Sbjct: 1 MKANNRRKVFGDAVDLLMDDIEE---------KTAAGGLQMLPIKKIRPFHDHPFHLYEG 51
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP 110
+ LED+ S++ HGI+ P+IV+ ID G Y++++G R AAK+ L E+P
Sbjct: 52 DRLEDMVASVREHGILNPVIVQEIDGG-YEMLSGHNRMNAAKLVGLKEIP 100
>gi|299822127|ref|ZP_07054013.1| immunoglobulin-binding regulator B [Listeria grayi DSM 20601]
gi|299815656|gb|EFI82894.1| immunoglobulin-binding regulator B [Listeria grayi DSM 20601]
Length = 175
Score = 38.1 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 31/100 (31%), Gaps = 1/100 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ + I + N +NP E L L +SI+ G QP++ I I
Sbjct: 13 NVKMVPIDKVDENGYNPNKVATPE-LALLERSIREDGFTQPIVCYYIPKIDRYKIVDGYH 71
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
L V + +D + +A R
Sbjct: 72 RFFLARRRLQLKEVPVTVIDKSLAHRMASTIRHNRARGTH 111
>gi|182627039|ref|ZP_02954766.1| partition protein [Clostridium perfringens D str. JGS1721]
gi|182627066|ref|ZP_02954789.1| partition protein [Clostridium perfringens D str. JGS1721]
gi|177907563|gb|EDT70207.1| partition protein [Clostridium perfringens D str. JGS1721]
gi|177907603|gb|EDT70236.1| partition protein [Clostridium perfringens D str. JGS1721]
Length = 397
Score = 37.7 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 56/282 (19%), Positives = 115/282 (40%), Gaps = 23/282 (8%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +++++ E+ + I I +I N N +++ +E+L + IK +G+
Sbjct: 12 LNGISKNVKKVEEIEAKDNFKVEYIDIENIKRNEKN---FYDIVDIEELAEDIKLNGLNH 68
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAK------MASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
L+VR +DNG +++I+GERR+ A + + VP + ++ + I I N Q
Sbjct: 69 NLVVRKLDNGQFELISGERRYTALSKLVKEGNKTFALVPCKVIEANDTDAEIILIQANAQ 128
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
++L+ +E+ ++L Y + + + GK R +AN L++ E I I
Sbjct: 129 TRELSEVEKLKQVQRLKELYKIKKANGEKVTGKVREIIANDLKLSPTQVGRYEKINSSLI 188
Query: 192 SLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ ++ + + + EL+ N + + +K +
Sbjct: 189 PELKNVLEKGNLTIANASEFANLSEDNQKVILELINSNVNLSKNEAIELKNKLKKIEEEK 248
Query: 252 DLEKK-----------ISSKVGLNISIKHRNNK---GQFCIK 279
LE K + +K+ NI + K GQ I+
Sbjct: 249 ALEYKEREKLIQENSTLKNKLNSNIEKTNEERKELEGQLRIE 290
>gi|303251372|ref|ZP_07337550.1| hypothetical protein APP6_0573 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649914|gb|EFL80092.1| hypothetical protein APP6_0573 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 563
Score = 37.7 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 3/109 (2%)
Query: 1 MSNNYSKRR-LGRGLA-ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYF 58
M+ N + + R L + I ++ S + + +++ + P HNPR
Sbjct: 1 MTKNEKRAAAIARNLNVSPIANISPSYSTVTPNHYSSEVEYITVTLDKLRPYEHNPRKTR 60
Query: 59 ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLS 107
E + +SI+ G+ + + IIA R + L
Sbjct: 61 NP-NFEMIKESIRRRGLDHKPNITRRPGEDFYIIADGGNTRIQALKELF 108
>gi|254388101|ref|ZP_05003337.1| hypothetical protein SSCG_00664 [Streptomyces clavuligerus ATCC
27064]
gi|294817420|ref|ZP_06776062.1| plasmid partitioning protein parB [Streptomyces clavuligerus ATCC
27064]
gi|326446245|ref|ZP_08220979.1| plasmid partitioning protein [Streptomyces clavuligerus ATCC
27064]
gi|197701824|gb|EDY47636.1| hypothetical protein SSCG_00664 [Streptomyces clavuligerus ATCC
27064]
gi|294322235|gb|EFG04370.1| plasmid partitioning protein parB [Streptomyces clavuligerus ATCC
27064]
Length = 480
Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 11/88 (12%)
Query: 1 MSNNYSKRRLGRGLA------ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNP 54
MS LG G + A I Q+ID+ K +S+ I NP NP
Sbjct: 1 MSKASK---LGTGSSFQQAQRASISPRRQAIDAATKAPTAGALPPVELSVDVISLNPANP 57
Query: 55 RNYFESEGLEDLCQSIKSHGIIQPLIVR 82
R L L S++ HG + +
Sbjct: 58 RTEL--GDLSQLAGSMRDHGQKTAISIM 83
>gi|312144350|ref|YP_003995796.1| parB-like partition protein [Halanaerobium sp. 'sapolanicus']
gi|311905001|gb|ADQ15442.1| parB-like partition protein [Halanaerobium sp. 'sapolanicus']
Length = 308
Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
ISI +I P R F E +E L +SI G +QP++V+ N Y +IAGERR R
Sbjct: 4 KEISIRNIESRPEQIRQEFAEEKIESLARSIAEVGQLQPVVVQK-KNSHYLLIAGERRLR 62
Query: 100 AAKMASLSEVPVIIRNVD--NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQND 157
A K ++ +I D + +I ++EN+QR+DLNPLE A+ + + + T+ D
Sbjct: 63 AIKKDGKEKIAAVILEGDISPEKFRQIQLIENLQRQDLNPLERAISINKFMEDNNLTKKD 122
Query: 158 IGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVST 202
+G +R+ + L IL+ ++ + KE+ ++ + ++
Sbjct: 123 AAERLGIARTTLTLWLNILEFKKKYQKEVLKEDSAITLSHLSLAH 167
>gi|171318742|ref|ZP_02907883.1| parB-like partition protein [Burkholderia ambifaria MEX-5]
gi|171096058|gb|EDT40986.1| parB-like partition protein [Burkholderia ambifaria MEX-5]
Length = 343
Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 16/149 (10%)
Query: 11 GRGLAALIGEVNQSIDSPE-----------KKTETIPESQDCISIHSIVPNPHNPRNYFE 59
GR ++L+ + +++ +P ++ + + I+ I NP N R ++
Sbjct: 38 GR--SSLLDQPKENVAAPTRSSAEAYLASLEQAGKVQARYITMPINHIDDNPLNSRTIYK 95
Query: 60 SEGLEDLCQSIKSHGIIQPLIVRAID--NGLYKIIAGERRFRAAKMASLSEVPVIIRNVD 117
E + S+ G + P++ +I G+ R A + V +
Sbjct: 96 EELIAARAASMARDGQLVPVLAGRHPDFPDRAILIDGQFRKLGALRNRSETLDVKLLEGL 155
Query: 118 NKSSLEIAIV-ENVQRKDLNPLEEALGYE 145
+ N +R+ L+ ALGY+
Sbjct: 156 DPIDFYRLARAANNEREQETILDIALGYK 184
>gi|320013198|gb|ADW08046.1| parB-like partition protein [Streptomyces flavogriseus ATCC 33331]
Length = 366
Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 67/229 (29%), Gaps = 8/229 (3%)
Query: 16 ALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGI 75
A + TE S + I +I NP+NPR + +E++ S+ S GI
Sbjct: 28 ARFAGQDAPTGPGNTPTEAATASPR-LPITAIARNPYNPREEL--KAIEEMADSLTSRGI 84
Query: 76 IQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVP----VIIRNVDNKSSLEIAIVENVQ 131
IQPL V G+ + + + + I
Sbjct: 85 IQPLTVVTRS-AFLAAHPGQDEALGTAQYVVVDGNRRLAGAKVAGIDDVPVHIDDSLADD 143
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
L + + + +V S A + K V + + ++
Sbjct: 144 ADTLLETALTAAVQHEDLDPLDEAKALQRLVEVHGSQRAVARSLGKSSGWVTQRLALLKL 203
Query: 192 SLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIF 240
+ + + P+ +A+ + + +++K +
Sbjct: 204 TPDLQQAVEDKKLPVEVARTVGQLPEQQQGGAAEAALVKREQKKATRKR 252
>gi|166033003|ref|ZP_02235832.1| hypothetical protein DORFOR_02724 [Dorea formicigenerans ATCC
27755]
gi|166027360|gb|EDR46117.1| hypothetical protein DORFOR_02724 [Dorea formicigenerans ATCC
27755]
Length = 321
Score = 37.7 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 98/250 (39%), Gaps = 20/250 (8%)
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMA 104
+ P +P + + + L +SI+ +GI+ PLIVR + +G Y+II+G RR AA+
Sbjct: 53 ERLRPFKEHPFQVKDDKEMFLLQESIEKYGILNPLIVRPVPDGYYEIISGHRRKHAAEKL 112
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+VPVIIR + S+ + N+ R+ ++ E+A Y+ S V
Sbjct: 113 GYRKVPVIIRVLSEDDSILSMVDSNLHRERISYSEKAFAYKLKNDVLKRKSGRKKSQVDH 172
Query: 165 SRSHVANILRIL----KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
I I P V+ I ++ + L A I + +
Sbjct: 173 KTPRKRAIEIISEDCGDSPKQVQRYISLTKLIPEMLQKLDDEIISFCPAVEIAALSEKEQ 232
Query: 221 DTEELVQEQDNKKE---KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
+ E + ++I + S+EK+ L +E+ + KG+
Sbjct: 233 RELLVAMEYAQAIPSLSQAQRIRQLSKEKQLSLEKMEEIMCEV-----------KKGEIT 281
Query: 278 -IKYETNEQL 286
+ + EQL
Sbjct: 282 RVAFTN-EQL 290
>gi|167949462|ref|ZP_02536536.1| partitioning protein B [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 88
Score = 37.7 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 218 SVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRN 271
+VR+TE LV++ + EK K E++ + L ++ ++G + IK
Sbjct: 26 TVRETERLVRKLQEQGEKPAKPIAA--EQDPNVKRLLNDLTERLGAKVDIKQSR 77
>gi|153854272|ref|ZP_01995571.1| hypothetical protein DORLON_01566 [Dorea longicatena DSM 13814]
gi|149753047|gb|EDM62978.1| hypothetical protein DORLON_01566 [Dorea longicatena DSM 13814]
Length = 321
Score = 37.7 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 98/250 (39%), Gaps = 20/250 (8%)
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMA 104
+ P +P + + + L +SI+ +GI+ PLIVR + +G Y+II+G RR AA+
Sbjct: 53 ERLRPFKEHPFQVKDDKEMFLLQESIEKYGILNPLIVRPVPDGYYEIISGHRRKHAAEKL 112
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+VPVIIR + S+ + N+ R+ ++ E+A Y+ S V
Sbjct: 113 GYRKVPVIIRVLSEDDSILSMVDSNLHRERISYSEKAFAYKLKNDVLKRKSGRKKSQVDH 172
Query: 165 SRSHVANILRIL----KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
I I P V+ I ++ + L A I + +
Sbjct: 173 KTPRKRAIEIISEDCGDSPKQVQRYISLTKLIPEMLQKLDDEIISFCPAVEIAALSEKEQ 232
Query: 221 DTEELVQEQDNKKE---KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
+ E + ++I + S+EK+ L +E+ + KG+
Sbjct: 233 RELLVAMEYAQAIPSLSQAQRIRQLSKEKQLSLEKMEEIMCEV-----------KKGEIT 281
Query: 278 -IKYETNEQL 286
+ + EQL
Sbjct: 282 RVAFTN-EQL 290
>gi|302876837|ref|YP_003845470.1| carbamoyl-phosphate synthase, large subunit [Clostridium
cellulovorans 743B]
gi|307687522|ref|ZP_07629968.1| carbamoyl-phosphate synthase, large subunit [Clostridium
cellulovorans 743B]
gi|302579694|gb|ADL53706.1| carbamoyl-phosphate synthase, large subunit [Clostridium
cellulovorans 743B]
Length = 1076
Score = 37.7 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNK-GQFCIKYETNEQ 285
+ N + + E ++E ++ +I +N K I E+
Sbjct: 896 FKLKNVNSVLGPQMKSTGEVMGVGKNVEDALAKTFAAIGNINDKNKKANSIIISLYNKEE 955
Query: 286 LKIICSLLGE 295
L I LL +
Sbjct: 956 LTTITDLLKD 965
>gi|144898902|emb|CAM75766.1| DNA methylase N-4/N-6:ParB-like nuclease [Magnetospirillum
gryphiswaldense MSR-1]
Length = 410
Score = 37.7 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
I I I P NPR + + SI G QP++V + I+ G R
Sbjct: 2 QVTEIDIGKITPYARNPRR--NDGAIAKVAASIVEFGWRQPIVV----DEAMVIVVGHTR 55
Query: 98 FRAAKMASLSEVPVI 112
F AAK L+ VPV
Sbjct: 56 FEAAKRLGLTTVPVH 70
>gi|94970220|ref|YP_592268.1| parB-like partition proteins [Candidatus Koribacter versatilis
Ellin345]
gi|94552270|gb|ABF42194.1| parB-like partition protein [Candidatus Koribacter versatilis
Ellin345]
Length = 597
Score = 37.7 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Query: 24 SIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRA 83
+P + + + +V + NP+ E ++L SI+ HGI+QP++VR
Sbjct: 8 QPAAPPAALLNDSNAYQLLPLAQVVLSKTNPKGRCEGPEFDELVASIRQHGILQPILVRP 67
Query: 84 IDNG-LYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
+ Y+I+AGERR+ AAK A ++P + R + ++ + E+ ++EN+QRKD+ LEEA
Sbjct: 68 VGEEGKYEIVAGERRYSAAKAAGREDIPAVTRLLSDREAHELQLIENLQRKDVTALEEAE 127
Query: 143 GYEQ 146
G+
Sbjct: 128 GFRN 131
>gi|255280104|ref|ZP_05344659.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
gi|255269195|gb|EET62400.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
Length = 498
Score = 37.4 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 80/268 (29%), Gaps = 24/268 (8%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
G V+ + I I NPRN +E +++L + I G+ Q
Sbjct: 4 FGVVSDLLSDVSVAKTGRDMDTVWIPRERIR---KNPRNGYEISNVQELAEDIARCGLAQ 60
Query: 78 PLIVRAIDNGLYKIIAGERR--------FRAAKMASLSEVPVIIRNVDNKSSLEIAIVEN 129
PL V ++G Y +I GERR R + + D S + +
Sbjct: 61 PLEVTPAEDGNYLLITGERRLTALDDLIDRGIWKKDIPCFVRTMAYYDLPLSAQEKEMYA 120
Query: 130 VQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL-------------RIL 176
+ R + +++ G + + ++
Sbjct: 121 ILRTNCLNRDKSDADLYFEVTEWGKIISELKQKGYKQISTDSGNISLRGRTREIAAAQVH 180
Query: 177 KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKR 236
++ R ++ + V A VS L Q + ++
Sbjct: 181 ISTGQAAKIERIQKHGHEKLQEAVRKGRIRLAAAYNVSLMTQEEQEAFLEQCAGKESIRQ 240
Query: 237 KKIFEGSREKEKYLTDLEKKISSKVGLN 264
+++ + EK +L++++ +
Sbjct: 241 EELENFRKNAEKEQQNLQEELVREFCTR 268
>gi|118592676|ref|ZP_01550066.1| probable replication protein B [Stappia aggregata IAM 12614]
gi|118434727|gb|EAV41378.1| probable replication protein B [Stappia aggregata IAM 12614]
Length = 338
Score = 37.4 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 62/147 (42%), Gaps = 12/147 (8%)
Query: 25 IDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLE---DLCQSIKSHGIIQPLIV 81
++ + + +S + + I P+P R ++E E +L +S+ P++V
Sbjct: 38 ANAEKALRDLAGDSIVNLDPNRIEPSPFRDRMEEDAEAREQQDELKRSLLKENQKLPVLV 97
Query: 82 RAID--NGLYKIIAGERRFRA-------AKMASLSEVPVIIRNVDNKSSLEIAIVENVQR 132
R Y++ G RR+RA + + +RN+ + + +EN R
Sbjct: 98 RPHPSQPNFYQLAYGHRRWRAIKEIASESDRPETVFLRAYVRNLTDAQLIHEQTIENGVR 157
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIG 159
++L+ +E+AL +QL S +
Sbjct: 158 ENLSWIEKALWAQQLKSTGIKQREMTS 184
>gi|258405836|ref|YP_003198578.1| parB-like partition protein [Desulfohalobium retbaense DSM 5692]
gi|257798063|gb|ACV69000.1| parB-like partition protein [Desulfohalobium retbaense DSM 5692]
Length = 243
Score = 37.4 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 16/242 (6%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGL-EDLCQSIKSHGIIQPLIVRAIDNGL 88
+E I I ++ + +P+ E + + L + IK HG QP+ R G
Sbjct: 2 APSEYIHGQLYHIPVNDLHFDPNQSTVEINEEVILDKLTRLIKEHGFFQPVFFRKTPEGQ 61
Query: 89 YKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLI 148
++I G RR AAK A +P I + E+ ++N+ +DL P+E A Y+
Sbjct: 62 LQLILGGRRLMAAKQAGWDVIPAIYCA---QKYCEVTFIKNLLLQDLTPIERAEAYQ-QA 117
Query: 149 SEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK--EEISLGHARTLVSTSDPL 206
Y +T+N + I S + L + KLP ++++ R + R + +
Sbjct: 118 VAYQFTKNQLAEIFQSSPEEIDAYLALNKLPEAIKDGCRYSSQYRLEDLHRLVGMQDELQ 177
Query: 207 SLAQVIVSKKMSVRDTEELVQEQDNKKEKRKK---------IFEGSREKEKYLTDLEKKI 257
A + + SV +T ++++ E + + YL L ++I
Sbjct: 178 WDAWKRLCSQESVCETSTMLEDCIQGCHHLATLLGCAGESLSPEKLQTLKPYLQQLRQRI 237
Query: 258 SS 259
Sbjct: 238 DE 239
>gi|309774676|ref|ZP_07669700.1| spoOJ protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308917576|gb|EFP63292.1| spoOJ protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 232
Score = 37.4 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 81/253 (32%), Gaps = 45/253 (17%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
I I+ I P +N + + +E L Q+I G++ P+ + +G Y I++GERR+RA
Sbjct: 21 IFIYDIDPCEYN---MYPMQEIEQLAQNISECGLLHPITLYRKADGRYMILSGERRYRAM 77
Query: 102 KMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSI 161
+ + +E I +
Sbjct: 78 LL------------------------------NYEKGDERWEEIPAIVKMQELTMREIRR 107
Query: 162 VGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRD 221
+ + L V+E + + + T +A SV+D
Sbjct: 108 FVRRGNANRETLPKELKLQIVKESLLDYQQTKEEGLIPTGTLKREWIAMDTGFSARSVQD 167
Query: 222 TEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFCIKYE 281
L++E E + D++ + + L + I + Q IK +
Sbjct: 168 YLNLLEE--------HPNKEKKESRSLKYEDIQNSMHDVLRLPVKITDK----QISIKIK 215
Query: 282 TNEQLKIICSLLG 294
+ L + LLG
Sbjct: 216 DDLDLARVLELLG 228
>gi|218281940|ref|ZP_03488265.1| hypothetical protein EUBIFOR_00833 [Eubacterium biforme DSM 3989]
gi|218217050|gb|EEC90588.1| hypothetical protein EUBIFOR_00833 [Eubacterium biforme DSM 3989]
Length = 321
Score = 37.4 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 98/250 (39%), Gaps = 20/250 (8%)
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMA 104
+ P +P + + + L +SI+ +GI+ PLIVR + +G Y+II+G RR AA+
Sbjct: 53 ERLRPFKEHPFQVKDDKEMFLLQESIEKYGILNPLIVRPVPDGYYEIISGHRRKHAAEKL 112
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+VPVIIR + S+ + N+ R+ ++ E+A Y+ S V
Sbjct: 113 GYRKVPVIIRVLSEDDSILSMVDSNLHRERISYSEKAFAYKLKNDVLKRKSGRKKSQVDH 172
Query: 165 SRSHVANILRIL----KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
I I P V+ I ++ + L A I + +
Sbjct: 173 KIPRKRAIEIISEDCGDSPKQVQRYISLTKLIPEMLQKLDDEIISFCPAVEIAALSEKEQ 232
Query: 221 DTEELVQEQDNKKE---KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
+ E + ++I + S+EK+ L +E+ + KG+
Sbjct: 233 KELLVAMEYAQAIPSLSQAQRIRQLSKEKQLSLEKMEEIMCEV-----------KKGEIT 281
Query: 278 -IKYETNEQL 286
+ + EQL
Sbjct: 282 RVAFTN-EQL 290
>gi|210614279|ref|ZP_03290150.1| hypothetical protein CLONEX_02363 [Clostridium nexile DSM 1787]
gi|210150763|gb|EEA81772.1| hypothetical protein CLONEX_02363 [Clostridium nexile DSM 1787]
Length = 321
Score = 37.4 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 98/250 (39%), Gaps = 20/250 (8%)
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMA 104
+ P +P + + + L +SI+ +GI+ PLIVR + +G Y+II+G RR AA+
Sbjct: 53 ERLRPFKEHPFQVKDDKEMFLLQESIEKYGILNPLIVRPVPDGYYEIISGHRRKHAAEKL 112
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+VPVIIR + S+ + N+ R+ ++ E+A Y+ S V
Sbjct: 113 GYRKVPVIIRVLSEDDSILSMVDSNLHRERISYSEKAFAYKLKKDVLKRKSGRKKSQVDH 172
Query: 165 SRSHVANILRIL----KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
I I P V+ I ++ + L A I + +
Sbjct: 173 KTPRKRAIEIISEDCGDSPKQVQRYISLTKLIPEMLQKLDDEIISFCPAVEIAALSEKEQ 232
Query: 221 DTEELVQEQDNKKE---KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
+ E + ++I + S+EK+ L +E+ + KG+
Sbjct: 233 KELLVAMEYAQAIPSLSQAQRIRQLSKEKQLSLEKMEEIMCEV-----------KKGEIT 281
Query: 278 -IKYETNEQL 286
+ + EQL
Sbjct: 282 RVAFTN-EQL 290
>gi|119470844|ref|ZP_01613455.1| putative Rare lipoprotein A [Alteromonadales bacterium TW-7]
gi|119446071|gb|EAW27350.1| putative Rare lipoprotein A [Alteromonadales bacterium TW-7]
Length = 225
Score = 37.4 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 11/168 (6%), Positives = 43/168 (25%), Gaps = 1/168 (0%)
Query: 133 KDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEIS 192
+ G + + + + + + + + +
Sbjct: 50 YKEEGIASWYGRKFHGYHTSNGEIYDMFAMTAAHKTLPLPSFVRVTNTQNGKSVIVRVND 109
Query: 193 LGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTD 252
G + A + + + N + I + +
Sbjct: 110 RGPFHDDRIIDLSYAAAYKLGYYTHGTAKVKLEAIKLSNPAANKTYIQVAAGSTLANIEA 169
Query: 253 LEKKISSKVGLNISIKHRNNKGQFCI-KYETNEQLKIICSLLGENDFE 299
L +++ + L +I ++ + + + + + + L +N F+
Sbjct: 170 LAQRLRQQYKLPTNIVKKDTIYRLHLGPIQNAQHAEKVLKKLKQNQFQ 217
>gi|32526637|dbj|BAC79178.1| putative plasmid partitioning protein [Streptomyces violaceoruber]
Length = 380
Score = 37.4 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 17/182 (9%)
Query: 19 GEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR---NYFESEGLE----------D 65
ID E+ + + + I NP NPR +
Sbjct: 21 SSRRNLIDQTIAGEESTTAAITELPVTLISDNPDNPRNHLRNLDETVQSVREVGLIIPIA 80
Query: 66 LCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRN---VDNKSSL 122
+ D Y ++ G RR AA+ L+ +PV + N ++S L
Sbjct: 81 VATVDAYLRNRSDRAGDLDDGAQYIVVDGHRRLEAARRVGLATIPVRVDNGRVATDESLL 140
Query: 123 EIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSV 182
E A V N R D+ LEEA + L+ YG +Q +G ++ +++ L +LKL +
Sbjct: 141 EAAFVANYHRDDMTDLEEAHALKSLVDYYG-SQTKAAKRLGIPQNTISSKLSLLKLAPEL 199
Query: 183 RE 184
++
Sbjct: 200 KD 201
>gi|225028347|ref|ZP_03717539.1| hypothetical protein EUBHAL_02619 [Eubacterium hallii DSM 3353]
gi|224954393|gb|EEG35602.1| hypothetical protein EUBHAL_02619 [Eubacterium hallii DSM 3353]
Length = 321
Score = 37.4 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 98/250 (39%), Gaps = 20/250 (8%)
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMA 104
+ P +P + + + L +SI+ +GI+ PLIVR + +G Y+II+G RR AA+
Sbjct: 53 ERLRPFKEHPFQVKDDKEMFLLQESIEKYGILNPLIVRPVPDGYYEIISGHRRKHAAEKL 112
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+VPVIIR + S+ + N+ R+ ++ E+A Y+ S V
Sbjct: 113 GYRKVPVIIRVLSEDDSILSMVDSNLHRERISYSEKAFAYKLKNDVLKRKSGRKKSQVDH 172
Query: 165 SRSHVANILRIL----KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
I I P V+ I ++ + L A I + +
Sbjct: 173 KTPRKRAIEIISEDCGDSPKQVQRYISLTKLIPEMLQKLDDEIISFCPAVEIAALSEKEQ 232
Query: 221 DTEELVQEQDNKKE---KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
+ E + ++I + S+EK+ L +E+ + KG+
Sbjct: 233 RELLVAMEYAQAIPSLSQAQRIRQLSKEKQLSLEKMEEIMCEV-----------KKGEIT 281
Query: 278 -IKYETNEQL 286
+ + EQL
Sbjct: 282 RVAFTN-EQL 290
>gi|328861481|gb|EGG10584.1| hypothetical protein MELLADRAFT_76880 [Melampsora larici-populina
98AG31]
Length = 768
Score = 37.4 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 23/227 (10%), Positives = 60/227 (26%), Gaps = 11/227 (4%)
Query: 43 SIHSIVPNPHNPR----NYFESEGLED--LCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+ I+ N + R F E + L +H +Q ++ +
Sbjct: 267 PVDKIIRNQYQQRIFATQRFYPEPDLEHHLLSLYFTHVHLQNPLLHPPTFLQLHASGLAQ 326
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
+ + L + R D+ + L + T
Sbjct: 327 TETSFRSLCLFVFALASRFSDDPRVRLDIDGSQHPSPQVAGLRYCYSAVSYLYRPIATPA 386
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK 216
+ + V ++ + + + I L A+ + + + + + +
Sbjct: 387 TLFDLQAYVLLCVYSLGTVSPMSTWSI-----AGIGLQRAQEVGAHREHSHIWKTDKLRD 441
Query: 217 MSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL 263
R + + DN +E++ L ++ + G
Sbjct: 442 HLRRKAFFHLNQLDNSLSSILGRTAYMQEEDYDLAPIDPDMDETFGT 488
>gi|301164606|emb|CBW24165.1| putative transmembrane sensor/regulatory protein [Bacteroides
fragilis 638R]
Length = 292
Score = 37.4 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 250 LTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL-GENDFEY 300
L ++ +++S+ G++ISI + ++ + E L I LL +F Y
Sbjct: 226 LQEIARQLSNTFGVDISITDTALQNYRITARFSSEEGLDQILDLLHTVGNFNY 278
>gi|265766986|ref|ZP_06094815.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253363|gb|EEZ24839.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 292
Score = 37.4 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 250 LTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL-GENDFEY 300
L ++ +++S+ G++ISI + ++ + E L I LL +F Y
Sbjct: 226 LQEIARQLSNTFGVDISITDTALQNYRITARFSSEEGLDQILDLLHTVGNFNY 278
>gi|53715156|ref|YP_101148.1| putative anti-sigma factor [Bacteroides fragilis YCH46]
gi|60683092|ref|YP_213236.1| putative transmembrane sensor/regulatory protein [Bacteroides
fragilis NCTC 9343]
gi|253566288|ref|ZP_04843742.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|52218021|dbj|BAD50614.1| putative anti-sigma factor [Bacteroides fragilis YCH46]
gi|60494526|emb|CAH09323.1| putative transmembrane sensor/regulatory protein [Bacteroides
fragilis NCTC 9343]
gi|251945392|gb|EES85830.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 292
Score = 37.4 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 250 LTDLEKKISSKVGLNISIKHRN-NKGQFCIKYETNEQLKIICSLL-GENDFEY 300
L ++ +++S+ G++ISI + ++ + E L I LL +F Y
Sbjct: 226 LQEIARQLSNTFGVDISITDTALQNYRITARFSSEEGLDQILDLLHTVGNFNY 278
>gi|167554082|ref|ZP_02347823.1| parB-like partition protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205321647|gb|EDZ09486.1| parB-like partition protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 665
Score = 37.0 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 45/187 (24%), Positives = 91/187 (48%), Gaps = 7/187 (3%)
Query: 38 SQDCISIHSIVPNPHNPRNYFES-EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE- 95
+ + + ++V +P N R E + DL +I + G+IQ L+V ++ GL + AG
Sbjct: 35 QIEMVPLSALVKSPLNVRTIPYPVESVRDLADTILAIGLIQNLVVHSLPGGLSGVAAGGR 94
Query: 96 ----RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEY 151
+ ++ + VI++ V ++ ++ ++VEN QR ++P E+ G+ L SE
Sbjct: 95 RLAALQLLLSEKRIDAGYMVIVKRVSDELAVVASMVENNQRVAMHPAEQISGFRTL-SEQ 153
Query: 152 GYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQV 211
G T IG +G S HV +L++ L + ++ + ++ + + L +DP+ ++
Sbjct: 154 GKTPAQIGDQLGYSSRHVQRMLKLANLAPELIALLAENKLDVEQCQALSLENDPVRQVEI 213
Query: 212 IVSKKMS 218
K
Sbjct: 214 YQRVKAQ 220
>gi|291522910|emb|CBK81203.1| ParB-like partition proteins [Coprococcus catus GD/7]
Length = 289
Score = 37.0 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 98/250 (39%), Gaps = 20/250 (8%)
Query: 45 HSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMA 104
+ P +P + + + L +SI+ +GI+ PLIVR + +G Y+II+G RR AA+
Sbjct: 21 ERLRPFKEHPFQVKDDKEMFLLQESIEKYGILNPLIVRPVPDGYYEIISGHRRKHAAEKL 80
Query: 105 SLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGK 164
+VPVIIR + S+ + N+ R+ ++ E+A Y+ S V
Sbjct: 81 GYRKVPVIIRVLSEDDSILSMVDSNLHRERISYSEKAFAYKLKNDVLKRKSGRKKSQVDH 140
Query: 165 SRSHVANILRIL----KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVR 220
I I P V+ I ++ + L A I + +
Sbjct: 141 KTPRKRAIEIISEDCGDSPKQVQRYISLTKLIPEMLQKLDDEIISFCPAVEIAALSEKEQ 200
Query: 221 DTEELVQEQDNKKE---KRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC 277
+ E + ++I + S+EK+ L +E+ + KG+
Sbjct: 201 KELLVAMEYAQAIPSLSQAQRIRQMSKEKQLSLEKMEEIMCEV-----------KKGEIT 249
Query: 278 -IKYETNEQL 286
+ + EQL
Sbjct: 250 RVAFTN-EQL 258
>gi|331092097|ref|ZP_08340928.1| hypothetical protein HMPREF9477_01571 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402298|gb|EGG81869.1| hypothetical protein HMPREF9477_01571 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 291
Score = 37.0 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 42/242 (17%), Positives = 98/242 (40%), Gaps = 6/242 (2%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMAS 105
+ ++P + + L +SI+ +GI+ PLIVR + +G+Y+IIAG RR AA++
Sbjct: 24 RLRSFKNHPFQVKDDNEMHLLKESIEKYGILTPLIVRPVPDGVYEIIAGHRRRHAAELLG 83
Query: 106 LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKS 165
+VPVIIR ++ ++ + N+ R+ ++ E+A Y+ +
Sbjct: 84 YRKVPVIIRVMNEDEAILNMVDSNLHREKISFSEKAFAYKMKNDVLKRKSGRKKGQIDHE 143
Query: 166 RSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
+ I + + +++ + D ++ + ++++ ++
Sbjct: 144 TKKKRTVEIISEECGDSPKQVQRYISLTKLIPEFLQKLDDELISFNPAVEISALKEEQQK 203
Query: 226 VQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC-IKYETNE 284
+ + ++ +K + + + + IK KG+ + + E
Sbjct: 204 QLLEAMDYAQAVPSLSQAQRIKKLSKENQLTLEKMQEIMSEIK----KGEITRVAFTN-E 258
Query: 285 QL 286
QL
Sbjct: 259 QL 260
>gi|168210302|ref|ZP_02635927.1| partition protein [Clostridium perfringens B str. ATCC 3626]
gi|170711642|gb|EDT23824.1| partition protein [Clostridium perfringens B str. ATCC 3626]
Length = 397
Score = 37.0 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 57/282 (20%), Positives = 114/282 (40%), Gaps = 23/282 (8%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +++++ E+ + I I +I N N +++ +E+L + IK +G+
Sbjct: 12 LNGISKNVKKVEEIEAKDNFKVEYIDIDNIKRNEKN---FYDIVDVEELAEDIKLNGLNH 68
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAK------MASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
L+VR +DNG +++I+GERR+ A + + VP + ++ + I I N Q
Sbjct: 69 NLVVRKLDNGQFELISGERRYTALSKLVKEGNKTFALVPCKVIEANDTDAEIILIQANAQ 128
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
++L+ +E+ ++L Y + + GK R +AN L++ E I I
Sbjct: 129 TRELSEVEKLKQVQRLKELYKDKKAKGEKVPGKIREIIANDLKLSPTQVGRYEKINSSLI 188
Query: 192 SLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ ++ + + + EL+ N + + +K +
Sbjct: 189 PELKNVLEKGNLTIANASEFANLSQDNQKVILELINSNVNLSKNEAIELKNKLKKIEEEK 248
Query: 252 DLEKK-----------ISSKVGLNISIKHRNNK---GQFCIK 279
LE K + SK+ NI + K GQ I+
Sbjct: 249 ALEYKEREKLIKENSTLKSKLNSNIEKTNEERKKLEGQLRIE 290
>gi|160947570|ref|ZP_02094737.1| hypothetical protein PEPMIC_01505 [Parvimonas micra ATCC 33270]
gi|158446704|gb|EDP23699.1| hypothetical protein PEPMIC_01505 [Parvimonas micra ATCC 33270]
Length = 717
Score = 37.0 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 20/186 (10%), Positives = 49/186 (26%), Gaps = 9/186 (4%)
Query: 118 NKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177
++ I ++ + L+E S G + I++ +
Sbjct: 521 DEMYAAIGFGSINLKQIIPRLKEFYSDYYQESADDIINRVKSEKSGSKYNSKGVIVKGID 580
Query: 178 LPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRK 237
+ + K + E N K
Sbjct: 581 NIEVSFAKCCNPLPGDEIIGYITKGRGISVHNCDCANIKNVTNRDRLIAVEWTNSKNLFY 640
Query: 238 KIFEGSREKEK--YLTDLEKKISS-KVGLNISIKHRNNKGQ-----FCIKYETNEQLKII 289
K+ ++ L D+ IS K+ L + I + K + ++ + ++L +
Sbjct: 641 KVEVAIISLDQVGALADVAHIISESKLNL-VGITAKTGKDKTFITNIIVEIKNIDELDRL 699
Query: 290 CSLLGE 295
+ +
Sbjct: 700 INKIKS 705
>gi|331086939|ref|ZP_08336015.1| hypothetical protein HMPREF0987_02318 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409600|gb|EGG89039.1| hypothetical protein HMPREF0987_02318 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 291
Score = 37.0 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 43/242 (17%), Positives = 98/242 (40%), Gaps = 6/242 (2%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMAS 105
+ ++P + + L +SI+ +GI+ PLIVR + +G+Y+IIAG RR AA++
Sbjct: 24 RLRSFKNHPFQVKDDNEMHLLKESIEKYGILTPLIVRPVPDGVYEIIAGHRRRHAAELLG 83
Query: 106 LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKS 165
+VPVIIR ++ ++ + N+ R+ ++ E+A Y+ +
Sbjct: 84 YRKVPVIIRVMNEDEAILNMVDSNLHREKISFSEKAFAYKMKNDVLKRKSGRKKGQIDHE 143
Query: 166 RSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
+ I + + +++ + D ++ + ++++ E+
Sbjct: 144 TKKKRTVEIISEECGDSPKQVQRYISLTKLIPEFLQKLDDELISFNPAVEISALKEEEQK 203
Query: 226 VQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC-IKYETNE 284
+ + ++ +K + + + + IK KG+ + + E
Sbjct: 204 QLLEAMDYAQAVPSLSQAQRIKKLSKENQLTLEKMQEIMSEIK----KGEITRVAFTN-E 258
Query: 285 QL 286
QL
Sbjct: 259 QL 260
>gi|194015599|ref|ZP_03054215.1| DNA methylase N-4/N-6 [Bacillus pumilus ATCC 7061]
gi|194013003|gb|EDW22569.1| DNA methylase N-4/N-6 [Bacillus pumilus ATCC 7061]
Length = 425
Score = 37.0 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLE--DLCQSIKSHGIIQPLIVRAIDNGLYKIIAGE 95
+ I +H I P P+NPR + E L S+K G + PL+ + ++ G
Sbjct: 2 NIKTIPVHKINPAPYNPRIDLQPGDPEYDALKNSMKKFGYVDPLV---WNERTGHLVGGH 58
Query: 96 RRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLE 139
+RF+ +E+ V + +++++ + + N + +
Sbjct: 59 QRFKIIMEDRPTEILVSVVSLNDQDEKALNVALNKISGHWDETK 102
>gi|330994946|ref|ZP_08318867.1| putative chromosome-partitioning protein parB [Gluconacetobacter
sp. SXCC-1]
gi|329757930|gb|EGG74453.1| putative chromosome-partitioning protein parB [Gluconacetobacter
sp. SXCC-1]
Length = 641
Score = 36.6 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 2/154 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYF-ESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGER 96
+ +++ NP NPR L ++K+ GII P +VR GL + R
Sbjct: 2 ELREVDPKTLLDNPENPRKSAPNEAEERQLALNVKAVGIIHPPLVRETPGGLMIVAG-HR 60
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R RAA A L + V + D + A EN+ R+ + +E+ +L E +
Sbjct: 61 RRRAAVRAGLKTIQVTVAGDDAELDRMRAASENMIRQPMTQVEQWRVVARLREEKKWNDT 120
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEE 190
I + + + I R+ + + I +
Sbjct: 121 AICKALMLTPVQLKQIGRLSAILPDILAWIEAGK 154
>gi|325663366|ref|ZP_08151816.1| hypothetical protein HMPREF0490_02557 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470820|gb|EGC74050.1| hypothetical protein HMPREF0490_02557 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 291
Score = 36.6 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 43/242 (17%), Positives = 98/242 (40%), Gaps = 6/242 (2%)
Query: 46 SIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMAS 105
+ ++P + + L +SI+ +GI+ PLIVR + +G+Y+IIAG RR AA++
Sbjct: 24 RLRSFKNHPFQVKDDNEMHLLKESIEKYGILTPLIVRPVPDGVYEIIAGHRRRHAAELLG 83
Query: 106 LSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKS 165
+VPVIIR ++ ++ + N+ R+ ++ E+A Y+ +
Sbjct: 84 YRKVPVIIRVMNEDEAILNMVDSNLHREKISFSEKAFAYKMKNDVLKRKSGRKKGQIDHK 143
Query: 166 RSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEEL 225
+ I + + +++ + D ++ + ++++ E+
Sbjct: 144 TKKKRTVEIISEECGDSPKQVQRYISLTKLIPEFLQKLDDELISFNPAVEISALKEEEQK 203
Query: 226 VQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNNKGQFC-IKYETNE 284
+ + ++ +K + + + + IK KG+ + + E
Sbjct: 204 QLLEAMDYAQAVPSLSQAQRIKKLSKENQLTLEKMQEIMSEIK----KGEITRVAFTN-E 258
Query: 285 QL 286
QL
Sbjct: 259 QL 260
>gi|119854972|ref|YP_935577.1| putative plasmid partitioning protein [Mycobacterium sp. KMS]
gi|119697690|gb|ABL94762.1| putative plasmid partitioning protein [Mycobacterium sp. KMS]
Length = 278
Score = 36.6 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 87/256 (33%), Gaps = 14/256 (5%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPR----------NYFESEGLEDLC 67
+ + E+ + + + NP NPR + + + L
Sbjct: 12 LAGAVGDKSPVDTSHPKPDEAGRSVPLTDLTANPRNPRDDVGDLADLASITDIQLQPALV 71
Query: 68 QSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIV 127
S ++ + P + + L+ V D + + I
Sbjct: 72 VSKAAYLKLYPDDPITTRYVVINGCRRLAAAHKYGRSDLAIVVNDGVARDRITLISACIA 131
Query: 128 ENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIR 187
ENV R+D + +EEA E LI+E G + + K+ + V+ +LKL ++ +R
Sbjct: 132 ENVDRQDFDVIEEARAVEALIAECGRAVDAAN-RLHKTEAWVSQRRALLKLAPELQTALR 190
Query: 188 KEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKE 247
+ E+++ AR L +A+ + + E + + + I + +
Sbjct: 191 RGELAIRDARQLARVPLAEQVARWQATLDRNNDGGTE---NRQRPPSRSRVIASALADFD 247
Query: 248 KYLTDLEKKISSKVGL 263
L + + +G
Sbjct: 248 TEPDQLAHALRTYLGA 263
>gi|240111944|ref|YP_002961221.1| putative plasmid stabilization protein [Methylobacterium extorquens
AM1]
gi|240012890|gb|ACS44114.1| putative plasmid stabilization protein [Methylobacterium extorquens
AM1]
Length = 686
Score = 36.6 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 89/197 (45%), Gaps = 4/197 (2%)
Query: 42 ISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAA 101
I++ + P N R + G+E L +S+ G++Q L+V + ++++AG RR A
Sbjct: 34 IALTKLSVAPENVRRTDKRGGVEGLAESVAEEGLLQNLVVFETEASRFRVVAGGRRLAAL 93
Query: 102 KMASL---SEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDI 158
K+ + PV + ++++ +++ ENV R+ L+P +E + LI+E G+ ++
Sbjct: 94 KLLAKAGRWSGPVRCLVLPSEAAQRVSLAENVMRRALHPADEFEAFAALIAE-GHDAAEV 152
Query: 159 GSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMS 218
G + HV +++ + ++ + R E++L D V + +
Sbjct: 153 AQRFGTTVRHVEQRMKLAAVSPALVKAYRASEMTLDQLTAFAVVDDHARQEAVWNTHYVR 212
Query: 219 VRDTEELVQEQDNKKEK 235
+ + + ++
Sbjct: 213 ESSGQGIRRALLSEHVP 229
>gi|260589486|ref|ZP_05855399.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
gi|260540054|gb|EEX20623.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
Length = 315
Score = 36.6 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 30 KKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLY 89
++ +SI SI P ++P +E E LED+ +SIK HG++ P+IV +G Y
Sbjct: 20 EEEVRNNNDIRELSIESIKPFHNHPFRLYEGERLEDMVESIKEHGVLNPVIVLKTGDG-Y 78
Query: 90 KIIAGERRFRAAKMASLSEVP 110
++++G R AA++A L VP
Sbjct: 79 EMLSGHNRQNAARIAGLKTVP 99
>gi|332827732|gb|EGK00467.1| hypothetical protein HMPREF9455_03110 [Dysgonomonas gadei ATCC
BAA-286]
Length = 404
Score = 36.6 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 38/103 (36%), Gaps = 11/103 (10%)
Query: 198 TLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKI 257
T+ + + + E+ + ++ S ++ Y +L ++
Sbjct: 227 TITPAQIAEEHLILRFKNSLGAYEQIEVTGAAVRTSQFSEENTWLSPHRDGYYEELRDRL 286
Query: 258 SSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFEY 300
++K G ++++ Y++ ++L I LL ++ Y
Sbjct: 287 TTKEG--VTVQTG---------YKSKDELAFIKDLLKSDEIYY 318
>gi|259046910|ref|ZP_05737311.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
gi|259036533|gb|EEW37788.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
Length = 619
Score = 36.6 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 23/195 (11%), Positives = 55/195 (28%), Gaps = 19/195 (9%)
Query: 114 RNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANIL 173
+SS V + +E +E S + +
Sbjct: 413 HYPSIESSWGYHWVAKPLSMQMKKEDELYYFEAQWSIPMKDNETSSRAYVSRKMILDTQA 472
Query: 174 RIL-------KLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELV 226
++L + + I + S + + ++ A + S+ + +L
Sbjct: 473 KLLLVIDEEECGHALTQNFIIPTKHSNDVYSRFWTNGEMVTEAIQYSKRYNSLDEGIQLK 532
Query: 227 QEQDNKKEKRKKIFEGSREKEKYLTDL----EKKISSKVGLNISIKHRNNKGQFCIKYET 282
E +++ + L E++ G IK + G+ I Y +
Sbjct: 533 IRNKKDPIFTCIALEPYSVEKESIPRLDCPGEER-----GTK--IKCKTKSGEITI-YYS 584
Query: 283 NEQLKIICSLLGEND 297
E + L +++
Sbjct: 585 PEDIHNGLKYLKDSN 599
>gi|302875201|ref|YP_003843834.1| ParB domain-containing protein nuclease [Clostridium cellulovorans
743B]
gi|307688884|ref|ZP_07631330.1| ParB domain-containing protein nuclease [Clostridium cellulovorans
743B]
gi|302578058|gb|ADL52070.1| ParB domain protein nuclease [Clostridium cellulovorans 743B]
Length = 326
Score = 36.6 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 1 MSNNYSKRRLGRGLAALIGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFES 60
MS L +L ++ +S +++ + + D + I ++P ++P ++
Sbjct: 1 MSEKK--------LMSLAADMFGMDESKDERENEV--AVDEVEIEKLIPYRNHPFKLYDD 50
Query: 61 EGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASL 106
E +++ +SIK G+I P+I+R I Y+I++G R AAK A L
Sbjct: 51 ERFDNMVKSIKEFGVIVPIIIRPIGTE-YEILSGHNRVNAAKKAGL 95
>gi|319936315|ref|ZP_08010731.1| phage integrase family Site-specific recombinase [Coprobacillus sp.
29_1]
gi|319808430|gb|EFW04982.1| phage integrase family Site-specific recombinase [Coprobacillus sp.
29_1]
Length = 398
Score = 36.6 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 266 SIKHRNNKGQFCIKYETNEQLKIICSLLGENDF 298
I K + I++ T ++ + I +LL ++D+
Sbjct: 158 KIIGNIKKHKVKIEFWTLDEFQNIIALLKKDDY 190
>gi|325566969|ref|ZP_08143747.1| immunoglobulin-binding regulator B [Enterococcus casseliflavus ATCC
12755]
gi|325159141|gb|EGC71286.1| immunoglobulin-binding regulator B [Enterococcus casseliflavus ATCC
12755]
Length = 177
Score = 36.2 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 32/104 (30%), Gaps = 1/104 (0%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I + I N +NP E ++ L SI+ G QPL+ I+
Sbjct: 12 KLIPVSKIHANTYNPNTVAAPE-MDLLELSIREDGFTQPLVCYHDKEQDKYILIDGFHRY 70
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
L V + +D IA R E +G
Sbjct: 71 VVAKDRLELPSVPVTVIDKPFENRIASTIRHNRARGTHGIEKMG 114
>gi|83748936|ref|ZP_00945945.1| ParB [Ralstonia solanacearum UW551]
gi|83724359|gb|EAP71528.1| ParB [Ralstonia solanacearum UW551]
Length = 300
Score = 36.2 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 7/134 (5%)
Query: 31 KTETIPESQDCISIHSIVPNPHNPR----NYFESEGLEDLCQSIKSHGIIQPLIVRAIDN 86
T P I I I NPR F+ +K I A +
Sbjct: 2 NTRIQPGEIRMIPIDRIDV--INPRERNSKVFDEIVGNIKTIGLKK-PITVTPRAAADGS 58
Query: 87 GLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQ 146
+ ++ GE R +A + + +P I+ +V ++ + +++ EN+ R+ PLE G Q
Sbjct: 59 EKFLLVCGEGRLKAFRSLGETTIPAIVVHVSDEDAFIMSLAENIARRQCRPLELLAGIRQ 118
Query: 147 LISEYGYTQNDIGS 160
L +
Sbjct: 119 LRDSGYSPKIIAEK 132
>gi|168204610|ref|ZP_02630615.1| partition protein [Clostridium perfringens E str. JGS1987]
gi|170663709|gb|EDT16392.1| partition protein [Clostridium perfringens E str. JGS1987]
Length = 397
Score = 36.2 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 57/282 (20%), Positives = 113/282 (40%), Gaps = 23/282 (8%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
+ +++++ E+ + I I +I N N +++ +E+L + IK +G+
Sbjct: 12 LNGISKNVKKVEEIEAKDNFKVEYIDIENIKRNEKN---FYDIVDVEELAEDIKLNGLNH 68
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAK------MASLSEVPVIIRNVDNKSSLEIAIVENVQ 131
L+VR +DNG +++I+GERR+ A + + VP + ++ + I I N Q
Sbjct: 69 NLVVRKLDNGKFELISGERRYTALSKLVKEGNKTFALVPCKVIEANDTDAEIILIQANAQ 128
Query: 132 RKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI 191
++L +E+ ++L Y + + GK R +AN L++ E I I
Sbjct: 129 TRELTEVEKLKQVQRLKELYKDKKAKGEKVPGKIREIIANDLKLSPTQVGRYEKINSSLI 188
Query: 192 SLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT 251
+ ++ + + + EL+ N + + +K +
Sbjct: 189 PELKNVLEKGNLTIANASEFANLSEDNQKVILELINSNVNLSKNEAIELKNKLKKIEEEK 248
Query: 252 DLEKK-----------ISSKVGLNISIKHRNNK---GQFCIK 279
LE K + SK+ NI + K GQ I+
Sbjct: 249 ALEYKEREKLIKENSTLKSKLNSNIEKTNEERKELEGQLRIE 290
>gi|257866873|ref|ZP_05646526.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257872610|ref|ZP_05652263.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257876459|ref|ZP_05656112.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257800831|gb|EEV29859.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257806774|gb|EEV35596.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257810625|gb|EEV39445.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 177
Score = 36.2 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 32/104 (30%), Gaps = 1/104 (0%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFR 99
I + I N +NP E ++ L SI+ G QPL+ I+
Sbjct: 12 KLIPVSKIHANTYNPNTVAAPE-MDLLELSIREDGFTQPLVCYHDKEQDKYILIDGFHRY 70
Query: 100 AAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
L V + +D IA R E +G
Sbjct: 71 IVAKDRLELPSVPVTVIDKPFENRIASTIRHNRARGTHGIEKMG 114
>gi|167391675|ref|XP_001739884.1| Rho/RAC guanine nucleotide exchange factor [Entamoeba dispar
SAW760]
gi|165896255|gb|EDR23726.1| Rho/RAC guanine nucleotide exchange factor, putative [Entamoeba
dispar SAW760]
Length = 636
Score = 36.2 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 70/237 (29%), Gaps = 5/237 (2%)
Query: 64 EDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLE 123
+DL + K + IQ ++A LY A K+ + + + +
Sbjct: 71 KDLKKENKHYTNIQDAFIKAAPFFLYMREFIGNNSHALKIVNSYKDNKKVDCYFEQIRQC 130
Query: 124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVR 183
+ + + + ++ ++ ++ +V I+K +S
Sbjct: 131 LPTKPQLDLGSMLIMPVQRTPRYVLLLNEVLKHTDKEKSLETYQNVEKAYNIMKDVASQV 190
Query: 184 EMIRKEEISLGHARTLVSTSDPLSLAQVIVSKK----MSVRDTEELVQEQDNKKEKRKKI 239
E + R + +P + M+ LV +
Sbjct: 191 NGYIPEFDRIQKLRIVSEYLEPSLRENWYCKGRSVIEMNKDALCGLVYSITTDYIVIGER 250
Query: 240 FEGSREKEKYLTDLEK-KISSKVGLNISIKHRNNKGQFCIKYETNEQLKIICSLLGE 295
+ L K +I S + I+I +NK + + + E++ + L
Sbjct: 251 KAKNITVPVKTISLFKPQIQSTLNFGITITSHDNKKTITLSFASQEEVNQFINKLSN 307
>gi|313669360|ref|YP_004049787.1| parB-like partition protein [Sulfuricurvum kujiense DSM 16994]
gi|313156557|gb|ADR35234.1| parB-like partition protein [Sulfuricurvum kujiense DSM 16994]
Length = 320
Score = 36.2 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 18 IGEVNQSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQ 77
I E S + E + ++I SI + + R + + + +L +SI++ G+I
Sbjct: 19 IEEAQALRQSISESIENKTSNTIEVAISSIASSKFHDRRWHDKMAIVELSKSIEAVGLIY 78
Query: 78 PLIVRAIDNGLYKIIAGERRFRAAKMASLSEVPVII-RNVDNKSSLEIAIVENVQRKDLN 136
P+++R ++ I G RR A K+ +P II NVD+ ++ + EN+QR+D++
Sbjct: 79 PVVLRRAGEE-FERIIGYRRIEAYKILGRETIPAIILENVDDDMAILLMATENMQREDIS 137
Query: 137 PLEEALGYEQL 147
+E L
Sbjct: 138 VYDETLALIDY 148
>gi|229605023|ref|YP_002875722.1| ParB-like nuclease domain containing protein [Lactococcus phage
P087]
gi|227826006|gb|ACP41730.1| ParB-like nuclease domain containing protein [Lactococcus phage
P087]
Length = 174
Score = 35.8 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 40 DCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGII---QPLIVRAIDNGLYKIIAGER 96
+ + + + PNP NPR E L L SI+ + +P++ D+G I+ G +
Sbjct: 7 EYMPLSYLKPNPKNPRK-INEESLVRLMNSIQENPDFFEARPIVASRQDDGYLLILGGHQ 65
Query: 97 RFRAAKMASLSEVPVIIRNV 116
R+ AA L VPV + +
Sbjct: 66 RYLAAMKLGLDTVPVTVMDN 85
>gi|295840691|ref|ZP_06827623.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295825246|gb|EDY43188.2| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 349
Score = 35.8 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 66/221 (29%), Gaps = 2/221 (0%)
Query: 23 QSIDSPEKKTETIPESQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVR 82
+I + S + H I NP NPR+ L DL S+K HG Q + V
Sbjct: 25 AAIAQARQVPTEGVPSPTELPPHRISLNPDNPRSSL--GDLTDLAGSLKDHGQKQAITVM 82
Query: 83 AIDNGLYKIIAGERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEAL 142
D + A E + + + + S + ++ + + +
Sbjct: 83 NRDAYIAANPAAEEKLEPDTAYVVIDGSSRLAAAREASLTTVKVMVDDGQGGTSEEILES 142
Query: 143 GYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVST 202
I ++ D + + + + + + I LG + + +
Sbjct: 143 ALVANIHRRELSELDEARALQRLLALHGSQRALAARLHRSQPWISTRLALLGLSEEMQNL 202
Query: 203 SDPLSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGS 243
+ + + +Q +K+ ++ +
Sbjct: 203 VGTEKIEHLRAIGNKPAEEQPAALQALKDKESTQRTVRNRK 243
>gi|17545486|ref|NP_518888.1| pyridoxamine 5'-phosphate oxidase [Ralstonia solanacearum GMI1000]
gi|81506119|sp|Q8Y1C3|PDXH1_RALSO RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase 1;
AltName: Full=PNP/PMP oxidase 1; Short=PNPOx 1; AltName:
Full=Pyridoxal 5'-phosphate synthase 1
gi|17427778|emb|CAD14297.1| probable pyridoxamine 5'-phosphate oxidase (pnp/pmp oxidase)
oxidoreductase protein [Ralstonia solanacearum GMI1000]
Length = 212
Score = 35.8 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 17/146 (11%), Positives = 38/146 (26%), Gaps = 1/146 (0%)
Query: 42 ISIHSIVPNP-HNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRFRA 100
+ I + PNP R +F+ ++ + + + ER F
Sbjct: 16 LDIADVDPNPLRQFRRWFDEAIRAEVAEVNAMTLATVDPQGQPSARIVLLKNLDERGFTF 75
Query: 101 AKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGS 160
+ + N +E R + + + +G+
Sbjct: 76 FTNYCSHKGEELAANPHAALLFHWIGLERQVRVQGVVEKVSEAESDAYYHSRPLGSRLGA 135
Query: 161 IVGKSRSHVANILRILKLPSSVREMI 186
+ S V + + + RE
Sbjct: 136 WASEQSSEVPDRAVLEAREAEYRERF 161
>gi|29375212|ref|NP_814365.1| ParB-like nuclease domain-containing protein [Enterococcus faecalis
V583]
gi|227517568|ref|ZP_03947617.1| transcriptional regulator [Enterococcus faecalis TX0104]
gi|255973686|ref|ZP_05424272.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|257085969|ref|ZP_05580330.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|307272413|ref|ZP_07553667.1| immunoglobulin-binding regulator B family protein [Enterococcus
faecalis TX0855]
gi|307278301|ref|ZP_07559380.1| immunoglobulin-binding regulator B family protein [Enterococcus
faecalis TX0860]
gi|21693374|gb|AAM75321.1|AF454824_120 EF0120 [Enterococcus faecalis]
gi|29342671|gb|AAO80436.1| ParB-like nuclease domain protein [Enterococcus faecalis V583]
gi|227074967|gb|EEI12930.1| transcriptional regulator [Enterococcus faecalis TX0104]
gi|255966558|gb|EET97180.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256993999|gb|EEU81301.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|306505052|gb|EFM74243.1| immunoglobulin-binding regulator B family protein [Enterococcus
faecalis TX0860]
gi|306510875|gb|EFM79891.1| immunoglobulin-binding regulator B family protein [Enterococcus
faecalis TX0855]
gi|315025609|gb|EFT37541.1| immunoglobulin-binding regulator B family protein [Enterococcus
faecalis TX2137]
gi|315169105|gb|EFU13122.1| immunoglobulin-binding regulator B family protein [Enterococcus
faecalis TX1341]
gi|315576150|gb|EFU88341.1| immunoglobulin-binding regulator B family protein [Enterococcus
faecalis TX0309B]
gi|315581529|gb|EFU93720.1| immunoglobulin-binding regulator B family protein [Enterococcus
faecalis TX0309A]
Length = 177
Score = 35.8 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 53/168 (31%), Gaps = 2/168 (1%)
Query: 38 SQDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERR 97
+ + + I N +NP + E +E L SI G QP++ D II
Sbjct: 10 NVKMVPVEKIKSNSYNPNHVAGPE-MELLELSILKDGYTQPIVCYCDDKKDEYIIIDGFH 68
Query: 98 FRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYG-YTQN 156
+ L + + +D ++ R + + L+ + +
Sbjct: 69 RYLIGKSKLDLKELPVVVIDKPLEQRMSSTIRHNRARGKHEIDKMSELVLLLVNEGWDDH 128
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSD 204
IG +G + V + ++ L S+ E + D
Sbjct: 129 KIGKELGMEKEEVLRLKQVTGLKSAFLNHEFSESWDEFVKKNYPKQKD 176
>gi|69246065|ref|ZP_00603792.1| ParB-like nuclease [Enterococcus faecium DO]
gi|68195437|gb|EAN09883.1| ParB-like nuclease [Enterococcus faecium DO]
Length = 197
Score = 35.8 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 29/99 (29%), Gaps = 1/99 (1%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIAGERRF 98
+ I I N +NP E + L SI G QPL+ + I+
Sbjct: 12 VRLVPITKIQANDYNPNRVASPE-MNLLELSIIEDGFTQPLVCYYKEKEEKYILVDVLHR 70
Query: 99 RAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNP 137
L+ V + +D +A R
Sbjct: 71 YRVAKERLNLKVVPVTVIDKPIEERMASTIRHNRARGTH 109
>gi|145547216|ref|XP_001459290.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427114|emb|CAK91893.1| unnamed protein product [Paramecium tetraurelia]
Length = 886
Score = 35.8 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 18/194 (9%), Positives = 53/194 (27%), Gaps = 18/194 (9%)
Query: 109 VPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSH 168
+ + +D+ + + + + L + Q + + + +
Sbjct: 554 IRCYMCQMDDHIARDCPSLHFQVQASH-----YLAFLQQVKHVQQSSFVRKDRMDFNARF 608
Query: 169 VANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVIVSKKMSVRDTEELVQE 228
++ ++ E ++I + + + +
Sbjct: 609 HHKLISRIQDKYINTE----KKIQYYQEHKSHMLISIEQSEVQSIRTEEDDENAINQINR 664
Query: 229 QDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGL--NIS-IKHRNNKGQFCIKYETNEQ 285
DN + K K ++ + I ++ ++ I R+ KG+ I + +
Sbjct: 665 LDNFDRRFKSSVRLKHRKIDFVGRSTESIGRRIRTTNKVTTIIRRDPKGKLTISCGSEDD 724
Query: 286 ------LKIICSLL 293
L I L
Sbjct: 725 QFDKVALDRINKYL 738
>gi|220930666|ref|YP_002507575.1| parB-like partition protein [Clostridium cellulolyticum H10]
gi|220000994|gb|ACL77595.1| parB-like partition protein [Clostridium cellulolyticum H10]
Length = 449
Score = 35.8 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 17/124 (13%)
Query: 39 QDCISIHSIVPNPHNPRNYFESEGLEDLCQSIKSHGIIQPLIVRAIDNGLYKIIA----- 93
I+I+ + +P NPR L +L +SIK++G+ Q L V + A
Sbjct: 2 IQNININKLKNHPKNPRKEL--GDLTELAESIKTYGVFQNLTVVPWFCFETGVGADDPKQ 59
Query: 94 ----------GERRFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALG 143
G RR AAK+A L E+P +I ++D K+ L ++EN+QR DL E+A G
Sbjct: 60 QEEMGYFVVIGNRRLAAAKLAGLEELPCVISDMDYKTQLATMLLENMQRNDLTIYEQAQG 119
Query: 144 YEQL 147
++ +
Sbjct: 120 FQMM 123
>gi|317495810|ref|ZP_07954173.1| DNA mismatch repair protein MutS [Gemella moribillum M424]
gi|316913987|gb|EFV35470.1| DNA mismatch repair protein MutS [Gemella moribillum M424]
Length = 881
Score = 35.4 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 212 IVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLT-DLEKKISSKVGLNISIKHR 270
++R+ + + E + K+ + + +E E+ L + E+K+ ++ + K
Sbjct: 770 YYEAIENIRENQVVKDEANQKQLVQHLEKKVQKELEEKLRLEYEEKLQKELENKVKEKTN 829
Query: 271 NNKGQFCIKYETNEQ-LKIICSLLGENDF 298
N + + ++ N++ + I L +F
Sbjct: 830 GNYKKLQLDFDNNDEKFEFIKEKLTGLNF 858
>gi|120537083|ref|YP_957140.1| hypothetical protein Maqu_3946 [Marinobacter aquaeolei VT8]
gi|120326918|gb|ABM21225.1| hypothetical protein Maqu_3946 [Marinobacter aquaeolei VT8]
Length = 184
Score = 35.4 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 2/97 (2%)
Query: 206 LSLAQVIVSKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVG--L 263
A + +L+ + E ++EK+ + +S G
Sbjct: 87 HLRAIAKLDFPTRESLLRKLLVARTPVHEFESIARGDAQEKDVDIARFASTMSEVTGRPT 146
Query: 264 NISIKHRNNKGQFCIKYETNEQLKIICSLLGENDFEY 300
+I + G + + + L +C LG N EY
Sbjct: 147 DIRFNKKRKNGTITLNFYDLDDLDDLCRKLGFNPSEY 183
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.309 0.103 0.277
Lambda K H
0.267 0.0316 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,849,365,385
Number of Sequences: 14124377
Number of extensions: 87089860
Number of successful extensions: 246960
Number of sequences better than 10.0: 2977
Number of HSP's better than 10.0 without gapping: 2566
Number of HSP's successfully gapped in prelim test: 411
Number of HSP's that attempted gapping in prelim test: 240268
Number of HSP's gapped (non-prelim): 3195
length of query: 300
length of database: 4,842,793,630
effective HSP length: 138
effective length of query: 162
effective length of database: 2,893,629,604
effective search space: 468767995848
effective search space used: 468767995848
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.8 bits)