HHsearch alignment for GI: 254780806 and conserved domain: COG1492
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism].
Probab=97.08 E-value=0.0014 Score=40.37 Aligned_cols=203 Identities=17% Similarity=0.155 Sum_probs=96.0
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC-CCCCHHHCCCCCCCCC---CEEEEEE-C---CCCHHHCCC
Q ss_conf 999980889888899999999999987995999987877-6801121246333454---1167630-2---577121024
Q gi|254780806|r 8 IITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQ-GNASTGLGIELYDRKY---SSYDLLI-E---EKNINQILI 79 (265)
Q Consensus 8 vI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q-~~~~~~l~~~~~~~~~---ti~~~l~-~---~~~l~~~i~ 79 (265)
T Consensus 3 ~iMv~GT~S~~GKS~~~aglcRi~~~~G~~V~PFK--~QNMsLNs~--it~~G~EIgraQ~~QA~Aa~i~p~v~mNPvLL 78 (486)
T COG1492 3 AIMVQGTTSDAGKSFLVAGLCRILARRGYRVAPFK--SQNMSLNSA--ITPGGGEIGRAQALQALAAGIEPSVHMNPVLL 78 (486)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCH--HHHCCCCCE--ECCCCCEEEHHHHHHHHHCCCCCCCCCCCEEE
T ss_conf 53787214776546752453488873577547870--654346607--87799687550667898739987434287787
Q ss_pred CCCC-CCEEECCCCCCCCCCCCCC-CCCCCCCHHHHHHHH---HHHHCCCCCCEEEECCCCCCCCC-----CHHH---HH
Q ss_conf 4444-4200014887457750001-232222102333224---76510278203310133322221-----0112---33
Q gi|254780806|r 80 QTAI-PNLSIIPSTMDLLGIEMIL-GGEKDRLFRLDKALS---VQLTSDFSYIFLDCPPSFNLLTM-----NAMA---AA 146 (265)
Q Consensus 80 ~~~~-~~l~iipa~~~~~~~~~~l-~~~~~~~~~l~~~l~---~~l~~~yD~IiiD~pp~~~~~~~-----~al~---aa 146 (265)
T Consensus 79 KP~sd~~sQVIv~G~~~G~~s~~~yy~~--~~~~l~~~v~~s~~~l~~~~d~Vv~EGAGSpaEiNlr~~Di~Nm~~a~~~ 156 (486)
T COG1492 79 KPCSDTGSQVIVMGKDIGRKSAVEYYQE--GKGLLWVAVKESLERLDREYDVVVIEGAGSPAEINLRDRDIANMGVAEIA 156 (486)
T ss_pred EECCCCCEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCCCCCEEEEHHC
T ss_conf 0358884479994634466571788999--88999999999998754105589996379823227663661100220233
Q ss_pred HH-CCCCCCCCC----HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 10-011111231----1378887533577765543202677431002023125310011268999880852015626786
Q gi|254780806|r 147 DS-ILVPLQCEF----FALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQVVSDVRKNLGGKVYNTVIPRN 221 (265)
Q Consensus 147 d~-viip~~p~~----~s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~~l~~~~~~~v~~~~Ip~~ 221 (265)
T Consensus 157 dapvILV~DIdRGGvfAsl~GT~~------lL~~~~r--~~VkG~iINkFRGd~~ll~~gik~Le~~tg~~vlG-v~P~~ 227 (486)
T COG1492 157 DAPVILVGDIDRGGVFASLYGTLA------LLPESDR--ALVKGFIINKFRGDESLLDPGLKWLEELTGVPVLG-VLPYL 227 (486)
T ss_pred CCCEEEEEEECCCCEEEEEEEHHE------ECCHHHH--CCEEEEEEEEECCCHHHHHHHHHHHHHHHCCEEEE-ECCCC
T ss_conf 898899995115645417302122------3687676--00147999631798788745999999861974675-65255
Q ss_pred HHHH
Q ss_conf 8898
Q gi|254780806|r 222 VRIS 225 (265)
Q Consensus 222 ~~i~ 225 (265)
T Consensus 228 ~~~~ 231 (486)
T COG1492 228 KDAL 231 (486)
T ss_pred CCCC
T ss_conf 5455