HHsearch alignment for GI: 254780806 and conserved domain: PRK04308

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.

Probab=94.87  E-value=0.054  Score=31.13  Aligned_cols=38  Identities=21%  Similarity=0.344  Sum_probs=30.7

Q ss_pred             CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             87687499998088988889999999999998799599998
Q gi|254780806|r    2 EEKKSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLID   42 (265)
Q Consensus         2 ~~~~~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID   42 (265)
T Consensus       106 ~~~~~~~IaVT---GTnGKTTTtsli~~iL~~~g~~~~~~G  143 (445)
T PRK04308        106 NRRGDKVIAIT---GSNGKTTVTSLVGYLCIKCGLDTVIAG  143 (445)
T ss_pred             HCCCCCEEEEE---CCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             41699579994---899837799999999997599629985