HHsearch alignment for GI: 254780806 and conserved domain: PRK09183
>PRK09183 transposase/IS protein; Provisional.
Probab=95.54 E-value=0.026 Score=32.97 Aligned_cols=31 Identities=32% Similarity=0.310 Sum_probs=29.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 0889888899999999999987995999987
Q gi|254780806|r 13 NQKGGVGKTTTAINLSTALAAIGENVLLIDL 43 (265)
Q Consensus 13 s~KGGvGKTT~a~nlA~~la~~g~rVllID~ 43 (265)
T Consensus 107 ~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~ 137 (258)
T PRK09183 107 LGPSGVGKTHLAIALGYEAVRAGIKVRFTTA 137 (258)
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCEEEEEEH
T ss_conf 8999986899999999999987993999789