HHsearch alignment for GI: 254780806 and conserved domain: PRK12723

>PRK12723 flagellar biosynthesis regulator FlhF; Provisional.
Probab=98.46  E-value=1.1e-06  Score=58.41  Aligned_cols=43  Identities=33%  Similarity=0.418  Sum_probs=34.6

Q ss_pred             CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHC----CCCEEEEECCCC
Q ss_conf             76874999980889888899999999999987----995999987877
Q gi|254780806|r    3 EKKSRIITIANQKGGVGKTTTAINLSTALAAI----GENVLLIDLDPQ   46 (265)
Q Consensus         3 ~~~~kvI~v~s~KGGvGKTT~a~nlA~~la~~----g~rVllID~D~q   46 (265)
T Consensus       171 ~~k~~vi~lV-GPTGvGKTTTiAKLAa~~~l~~~~k~~~V~lit~Dty  217 (388)
T PRK12723        171 NLKKRIFILV-GPTGVGKTTTIAKLAAIYGINSDDKSLNIKIITIDNY  217 (388)
T ss_pred             CCCCEEEEEE-CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
T ss_conf             5576289998-9988757879999999999862676773799980787