HHsearch alignment for GI: 254780806 and conserved domain: PRK13185
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional.
Probab=100.00 E-value=2.8e-36 Score=231.32 Aligned_cols=237 Identities=19% Similarity=0.237 Sum_probs=177.7
Q ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEECCC------CHHHCCC
Q ss_conf 7499998088988889999999999998799599998787768011212463334541167630257------7121024
Q gi|254780806|r 6 SRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELYDRKYSSYDLLIEEK------NINQILI 79 (265)
Q Consensus 6 ~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~~~~~l~~~~~~~~~ti~~~l~~~~------~l~~~i~ 79 (265)
T Consensus 2 ~~~iaiy-GKGGIGKSTttaNlsaALA~~GkkV~~IgcDPk~DsT~~L~g---~~~~tild~l~~~~~~~~~~~~ed~~~ 77 (269)
T PRK13185 2 ALVLAVY-GKGGIGKSTTSSNLSAALAKLGKKVLQIGCDPKHDSTFTLTG---KLVPTVIDILEEVDFHSEELRPEDFVF 77 (269)
T ss_pred CEEEEEE-CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCC---CCCCCHHHHHHHCCCCHHHCCHHHHHH
T ss_conf 5399997-899547888999999999976993899818997323011259---987878999974387602125667763
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC-CCCCCHHHHHHHCCCCCCCCCH
Q ss_conf 444442000148874577500012322221023332247651027820331013332-2221011233100111112311
Q gi|254780806|r 80 QTAIPNLSIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFN-LLTMNAMAAADSILVPLQCEFF 158 (265)
Q Consensus 80 ~~~~~~l~iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~-~~~~~al~aad~viip~~p~~~ 158 (265)
T Consensus 78 -~G~~gv~cvEaGGP~pG~GCaGrgi~~~~~~L~~-~--~~~~~~D~Vl~DvlgdVvCGGFa~Pi~~Ad~~~IVts~e~~ 153 (269)
T PRK13185 78 -EGYNGVDCVEAGGPPAGTGCGGYVVGETVKLLKE-H--HLLDDYDVILFDVLGDVVCGGFAAPLQYADYALIVTANDFD 153 (269)
T ss_pred -CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHH-C--CCCCCCCEEEEECCCCCCCCCCCCCHHCCCEEEEEECCHHH
T ss_conf -3767705664389999877676431899999987-2--87433787999536743336555751008889999253087
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 37888753357776554320267743100202312531001126899988085201562678688987773798579997
Q gi|254780806|r 159 ALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQVVSDVRKNLGGKVYNTVIPRNVRISEAPSYGKPAIIYD 238 (265)
Q Consensus 159 s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~~l~~~~~~~v~~~~Ip~~~~i~~a~~~g~pv~~~~ 238 (265)
T Consensus 154 al~aAnnI~~~i~~~a~~~--~~rl~GiI~Nr~~-----~~d~v~~fa~~~g~~vl~-~IP~~~~V~~se~~g~TviE~~ 225 (269)
T PRK13185 154 SIFAANRIAAAIQAKAKNY--KVRLAGVIANRSG-----GTDQIDKFNERVGLRTLA-HVPDLDAIRRSRLKGKTLFEME 225 (269)
T ss_pred HHHHHHHHHHHHHHHHHCC--CCCCCEEEEECCC-----CHHHHHHHHHHHCCCEEE-ECCCCHHHHHHHHCCCEEEEEC
T ss_conf 8999999999998653015--8532325761688-----377999999986997699-7899788999987498678858
Q ss_pred CCCHHHH---HHHHHHHHHHHHH
Q ss_conf 9998999---9999999999999
Q gi|254780806|r 239 LKCAGSQ---AYLKLASELIQQE 258 (265)
Q Consensus 239 p~s~~a~---~~~~la~el~~~~ 258 (265)
T Consensus 226 p~~~~a~v~~~Yr~LA~~i~~~~ 248 (269)
T PRK13185 226 ETDELEEVQNEYLRLADQLLAGP 248 (269)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99817899999999999998289