HHsearch alignment for GI: 254780806 and conserved domain: PRK13849

>PRK13849 putative crown gall tumor protein VirC1; Provisional.
Probab=100.00  E-value=7.3e-32  Score=205.53  Aligned_cols=195  Identities=18%  Similarity=0.212  Sum_probs=141.6

Q ss_pred             EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCE
Q ss_conf             49999808898888999999999999879959999878776801121246333454116763025771210244444420
Q gi|254780806|r    7 RIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELYDRKYSSYDLLIEEKNINQILIQTAIPNL   86 (265)
Q Consensus         7 kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~~~~l   86 (265)
T Consensus         2 ~vi~~~~~KGG~GKtT~a~~la~~~~~~g~~v~~iD~Dpq~s~~~W~e~a~~~~~------------~~--------~~~   61 (231)
T PRK13849          2 KLLTFCSFKGGAGKTTALMGLCAALASDGKRVALFEADENRPLTRWKENALRSNT------------WD--------PAC   61 (231)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCC------------CC--------CCC
T ss_conf             3799961899876999999999999978995999968998688999987652589------------88--------775


Q ss_pred             EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             00148874577500012322221023332247651027820331013332222101123310011111231137888753
Q gi|254780806|r   87 SIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFNLLTMNAMAAADSILVPLQCEFFALEGLSQL  166 (265)
Q Consensus        87 ~iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~~~~~~al~aad~viip~~p~~~s~~~~~~~  166 (265)
T Consensus        62 ~v~~~------------~~---~~~l~~~~e~~~~~~~D~VIIDtpg~~s~~~~~Ai~~ADLVLIP~qPSp~D~~~a~~t  126 (231)
T PRK13849         62 EVYAA------------DE---LPLLEAAYEDAELQGFDYALADTHGGSSELNNTIIASSNLLLIPTMLTPLDIDEALST  126 (231)
T ss_pred             CEEEC------------CC---HHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
T ss_conf             23405------------65---2578999988753699889981899775899999997898997799986679999999


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCEEECC--CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC---EEEECCC
Q ss_conf             3577765543202677431002023125--310011268999880852015626786889877737985---7999799
Q gi|254780806|r  167 LETVEEVRRTVNSALDIQGIILTMFDSR--NSLSQQVVSDVRKNLGGKVYNTVIPRNVRISEAPSYGKP---AIIYDLK  240 (265)
Q Consensus       167 ~~~i~~~~~~~~~~~~~~~iv~N~~~~~--~~~~~~~~~~l~~~~~~~v~~~~Ip~~~~i~~a~~~g~p---v~~~~p~  240 (265)
T Consensus       127 v~~i~~~~~~~~~~ip~-~vlltRv~a~~~t~~~~~i~~~l-e--~lPvl~T~i~eR~Af~~i~~~G~Lh~~l~~~~~~  201 (231)
T PRK13849        127 YRYVIELLLSENLAIPT-AILRQRVPVGRLTTSQRAMSDML-E--SLPVVDSPMHERDAFAAMKERGMLHLTLLNLSTD  201 (231)
T ss_pred             HHHHHHHHHHHCCCCCE-EEEEEECCHHHHCHHHHHHHHHH-H--CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCC
T ss_conf             99999999972878865-66654050454068899999999-6--2995555302279999999835146889865999