HHsearch alignment for GI: 254780806 and conserved domain: TIGR00750
>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=98.54 E-value=5.6e-07 Score=60.23 Aligned_cols=212 Identities=16% Similarity=0.194 Sum_probs=113.6
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC--HHHCCCCCCCCCCEEEEEECCCCHHHCCCC-
Q ss_conf 68749999808898888999999999999879959999878776801--121246333454116763025771210244-
Q gi|254780806|r 4 KKSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNAS--TGLGIELYDRKYSSYDLLIEEKNINQILIQ- 80 (265)
Q Consensus 4 ~~~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~~~--~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~- 80 (265)
T Consensus 36 GnA~~vG~T-G~PGaGKSTl~~~l~~~lrRrG~~VaViAvDP~SPfTGGsiLG---------------Dr~Rm~~~asrk 99 (333)
T TIGR00750 36 GNAHVVGIT-GVPGAGKSTLVEKLIMELRRRGLKVAVIAVDPSSPFTGGSILG---------------DRLRMQRLASRK 99 (333)
T ss_pred CCCEEEEEE-CCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHH---------------HHHHHHHHHHHH
T ss_conf 790787664-6888857779999989997659768999887975975514545---------------688775442222
Q ss_pred --CCCCCEEE--CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCC
Q ss_conf --44442000--14887457750001232222102333224765102782033101333222210112331001111123
Q gi|254780806|r 81 --TAIPNLSI--IPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFNLLTMNAMAAADSILVPLQCE 156 (265)
Q Consensus 81 --~~~~~l~i--ipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~~~~~~al~aad~viip~~p~ 156 (265)
T Consensus 100 qlW~dPg~FIRs~ptrG~lGGls~a-------t~~~~~ll---dA~G~DVI~vET-VGVGQSEVdi~~~aDT~v~v~~pg 168 (333)
T TIGR00750 100 QLWTDPGVFIRSMPTRGSLGGLSKA-------TRELVKLL---DAAGYDVILVET-VGVGQSEVDIINMADTFVVVTIPG 168 (333)
T ss_pred HHHCCCCCEECCCCCCCCHHHHHHH-------HHHHHHHH---HHCCCCEEEEEE-ECCCHHHHHHHHHHCEEEEEECCC
T ss_conf 3322898567677666752578799-------99999999---863898799984-157524878873415058985488
Q ss_pred CH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHC-----CCCCCCCCCCCHHHHHHHHC
Q ss_conf 11-3788875335777655432026774310020231253100112689998808-----52015626786889877737
Q gi|254780806|r 157 FF-ALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQVVSDVRKNLG-----GKVYNTVIPRNVRISEAPSY 230 (265)
Q Consensus 157 ~~-s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~~l~~~~~-----~~v~~~~Ip~~~~i~~a~~~ 230 (265)
T Consensus 169 ~GDd~Q~iKaG~m---Ei-----a--D-I-~VVNKaD~~~a--~~v~~~a~~~l~l~~esvqmlsqmthadearvq~G~~ 234 (333)
T TIGR00750 169 TGDDVQGIKAGVM---EI-----A--D-I-YVVNKADGEGA--EEVKTLARLMLALDLESVQMLSQMTHADEARVQKGEI 234 (333)
T ss_pred CCCHHHHHHHHHH---EE-----E--E-E-EEEECCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 7834666654430---23-----2--4-8-78816887665--8999999998888888999998653333444302655
Q ss_pred CCCEEEECCCC-----HHHHHHHHHHHHHHH
Q ss_conf 98579997999-----899999999999999
Q gi|254780806|r 231 GKPAIIYDLKC-----AGSQAYLKLASELIQ 256 (265)
Q Consensus 231 g~pv~~~~p~s-----~~a~~~~~la~el~~ 256 (265)
T Consensus 235 ~~r~~gW~Ppv~~tsA~~G~Gi~EL~daI~e 265 (333)
T TIGR00750 235 YRREKGWRPPVLKTSAVEGRGIDELWDAIEE 265 (333)
T ss_pred CCHHCCCCCCEEEEECCCCCCCHHHHHHHHH
T ss_conf 1101058996388733568871678999999