HHsearch alignment for GI: 254780806 and conserved domain: TIGR01007
>TIGR01007 eps_fam capsular exopolysaccharide family; InterPro: IPR005702 This family describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis (EPS). At least 13 genes EpsA to EpsM in streptococcus species seem to direct the EPS proteins and share high homology. ; GO: 0030234 enzyme regulator activity, 0045227 capsule polysaccharide biosynthetic process.
Probab=99.96 E-value=7e-30 Score=193.95 Aligned_cols=180 Identities=23% Similarity=0.315 Sum_probs=139.7
Q ss_pred CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC-CCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCC
Q ss_conf 9876874999980889888899999999999987995999987877-680112124633345411676302577121024
Q gi|254780806|r 1 MEEKKSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQ-GNASTGLGIELYDRKYSSYDLLIEEKNINQILI 79 (265)
Q Consensus 1 ~~~~~~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q-~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~ 79 (265)
T Consensus 14 ~a~~e~K~l~itS~~~~eGKsT~S~NiA~~fAqaGyKTLlIDgD~R~sv~~~~Fk~--~n~~~GLtn~L~g~~dl~~~i~ 91 (207)
T TIGR01007 14 GAEQEIKVLLITSVKAGEGKSTTSANIAVSFAQAGYKTLLIDGDMRNSVMSGTFKS--QNKIKGLTNFLSGNTDLSDAIC 91 (207)
T ss_pred CCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCEEEEECC--CCCCCCCHHHHCCCCCHHHHHH
T ss_conf 35787058998411058886241078899998568558887546586603678658--8876563332214545333420
Q ss_pred CCCC-CCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHH--HHHCCCCCCCC
Q ss_conf 4444-42000148874577500012322221023332247651027820331013332222101123--31001111123
Q gi|254780806|r 80 QTAI-PNLSIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFNLLTMNAMAA--ADSILVPLQCE 156 (265)
Q Consensus 80 ~~~~-~~l~iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~~~~~~al~a--ad~viip~~p~ 156 (265)
T Consensus 92 ~T~isenL~vi~sG~vPPNPt~LL~-----s~~F~~-l~e~~~~~fD~iiiDTPP-ig~V~DAai~a~~~d~~~LV~~A~ 164 (207)
T TIGR01007 92 ETNISENLDVITSGPVPPNPTELLQ-----SSNFKT-LIETLRKYFDYIIIDTPP-IGTVIDAAIIARAVDASILVTDAG 164 (207)
T ss_pred CCCCCCCCEEECCCCCCCCHHHHHH-----HHHHHH-HHHHHHCCCCEEEEEECC-CCHHHHHHHHHHHHCCEEEEEECC
T ss_conf 2654678727517887877547888-----899999-999987168889995188-666788999998729779887225
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCC
Q ss_conf 113788875335777655432026774310020231253
Q gi|254780806|r 157 FFALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRN 195 (265)
Q Consensus 157 ~~s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~ 195 (265)
T Consensus 165 ~~~k~~v~KAK~~LEq~----G~--~~LGvvLNK~d~s~ 197 (207)
T TIGR01007 165 KIKKREVKKAKEQLEQA----GS--KFLGVVLNKVDISV 197 (207)
T ss_pred CCCHHHHHHHHHHHHHH----CC--CEEEEEECCCCCCC
T ss_conf 32646789999999861----78--41158888825765