HHsearch alignment for GI: 254780806 and conserved domain: TIGR01393
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=95.37 E-value=0.014 Score=34.53 Aligned_cols=85 Identities=15% Similarity=0.324 Sum_probs=59.5
Q ss_pred CCCCCCEEEECCCCC--CCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHH
Q ss_conf 027820331013332--222101123310011111231137888753357776554320267743100202312531001
Q gi|254780806|r 122 SDFSYIFLDCPPSFN--LLTMNAMAAADSILVPLQCEFFALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQ 199 (265)
Q Consensus 122 ~~yD~IiiD~pp~~~--~~~~~al~aad~viip~~p~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~ 199 (265)
T Consensus 69 e~Y~LNLIDTPGHVDFsYEVSRSLAACEGALL~VDA~----QGvEA--QT~aN~YlAlE~dLeIIP-ViNKIDLP~Adpe 141 (598)
T TIGR01393 69 ETYVLNLIDTPGHVDFSYEVSRSLAACEGALLLVDAA----QGVEA--QTLANVYLALENDLEIIP-VINKIDLPSADPE 141 (598)
T ss_pred CEEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEECC----CCHHH--HHHHHHHHHHHCCCEEEE-EECCCCCCCCCHH
T ss_conf 7889964528897212737888888716403561410----32358--889999887561875847-7825368888858
Q ss_pred HHHHHHHHHHCCCC
Q ss_conf 12689998808520
Q gi|254780806|r 200 QVVSDVRKNLGGKV 213 (265)
Q Consensus 200 ~~~~~l~~~~~~~v 213 (265)
T Consensus 142 ~v~~eIe~~iGld~ 155 (598)
T TIGR01393 142 RVKKEIEEVIGLDA 155 (598)
T ss_pred HHHHHHHHHCCCCC
T ss_conf 99998765418896