HHsearch alignment for GI: 254780806 and conserved domain: TIGR01394
>TIGR01394 TypA_BipA GTP-binding protein TypA; InterPro: IPR006298 This bacterial (and Arabidopsis) protein, termed TypA or BipA, is a GTP-binding protein. It is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown.; GO: 0005525 GTP binding, 0005622 intracellular.
Probab=95.73 E-value=0.0061 Score=36.64 Aligned_cols=126 Identities=12% Similarity=0.112 Sum_probs=81.6
Q ss_pred CCCCEEEECCC--CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHH
Q ss_conf 78203310133--3222210112331001111123113788875335777655432026774310020231253100112
Q gi|254780806|r 124 FSYIFLDCPPS--FNLLTMNAMAAADSILVPLQCEFFALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQV 201 (265)
Q Consensus 124 yD~IiiD~pp~--~~~~~~~al~aad~viip~~p~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~ 201 (265)
T Consensus 70 ~~INIvDTPGHADFGGEVERvL~MVDGvlLlVDA~EGPMPQTr----FV--L~KAL~~gLkPI-VViNKiDrp~ARP~eV 142 (609)
T TIGR01394 70 TKINIVDTPGHADFGGEVERVLGMVDGVLLLVDASEGPMPQTR----FV--LKKALELGLKPI-VVINKIDRPSARPDEV 142 (609)
T ss_pred EEEEEEECCCCCCCCCEEEEECEEEEEEEEEEECCCCCCCCCH----HH--HHHHHHCCCCEE-EEECCCCCCCCCHHHH
T ss_conf 8997781689887886588733024058999857888988534----78--999995689369-9971347887883788
Q ss_pred HHHHHHHHCCCCCCCC--CCCCHHHHHHHHCCCCEEEECC--CCHHHHHHHHHHHHHHHHH
Q ss_conf 6899988085201562--6786889877737985799979--9989999999999999999
Q gi|254780806|r 202 VSDVRKNLGGKVYNTV--IPRNVRISEAPSYGKPAIIYDL--KCAGSQAYLKLASELIQQE 258 (265)
Q Consensus 202 ~~~l~~~~~~~v~~~~--Ip~~~~i~~a~~~g~pv~~~~p--~s~~a~~~~~la~el~~~~ 258 (265)
T Consensus 143 ~d~vFDLF~~-L-gA~deQLDFP~vYASa~~G~A~l~~~~dg~~~~~~~m~PLFd~I~~hv 201 (609)
T TIGR01394 143 VDEVFDLFIE-L-GADDEQLDFPIVYASARAGWASLDKDKDGLDDDSEDMAPLFDAILRHV 201 (609)
T ss_pred HHHHHHHHHH-C-CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 7578788885-3-888001012567665236720144665778872201789998986406