HHsearch alignment for GI: 254780806 and conserved domain: TIGR01968
>TIGR01968 minD_bact septum site-determining protein MinD; InterPro: IPR010223 This entry describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. In Escherichia coli, the cell division site is determined by the cooperative activity of min operon products MinC, MinD, and MinE . MinD is a membrane-associated ATPase and is a septum site-determining factor through the activation and regulation of MinC and MinE. MinD is also known to undergo a rapid pole-to-pole oscillation movement in vivo as observed by fluorescent microscopy. In plants, chloroplast division requires the dimerisation of stromal MinD . The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.; GO: 0016887 ATPase activity, 0000918 selection of site for barrier septum formation.
Probab=100.00 E-value=0 Score=336.62 Aligned_cols=243 Identities=28% Similarity=0.415 Sum_probs=203.7
Q ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC-CCCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCC-C
Q ss_conf 7499998088988889999999999998799599998787-7680112124633345411676302577121024444-4
Q gi|254780806|r 6 SRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDP-QGNASTGLGIELYDRKYSSYDLLIEEKNINQILIQTA-I 83 (265)
Q Consensus 6 ~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~-q~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~-~ 83 (265)
T Consensus 1 ~~viViTSGKGGVGKTTtTANlG~aLA~lG~kVvliD~DiGLRNLD~~lGLEnR-ivYt~vDVveG~C~l~qALikDKr~ 79 (272)
T TIGR01968 1 ARVIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADIGLRNLDLLLGLENR-IVYTLVDVVEGECRLQQALIKDKRL 79 (272)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCHH-HHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 958999817889773589899999999619828999547570345777423103-5453554324842110010012675
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC--CCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHH
Q ss_conf 4200014887457750001232222102333224765102--78203310133322221011233100111112311378
Q gi|254780806|r 84 PNLSIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSD--FSYIFLDCPPSFNLLTMNAMAAADSILVPLQCEFFALE 161 (265)
Q Consensus 84 ~~l~iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~--yD~IiiD~pp~~~~~~~~al~aad~viip~~p~~~s~~ 161 (265)
T Consensus 80 ~NL~LLpAsQ~rdK~~~~----~E~---~-~~lv~~Lk~~~~FDYviIDcPAGIE~GF~nAv~~Ad~AiVVttPEvsavR 151 (272)
T TIGR01968 80 ENLYLLPASQTRDKDAVT----PEQ---M-KKLVNELKEEEHFDYVIIDCPAGIESGFRNAVAPADEAIVVTTPEVSAVR 151 (272)
T ss_pred HHHHHHHHHHCCCCCCCC----HHH---H-HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCHH
T ss_conf 235663653023613469----778---9-99999985437930799737877435689987526835898778745100
Q ss_pred HHHHHHHHHHHHHHHHH--CCCCCCCCCCCEEECCCHHHHHH--HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEE
Q ss_conf 88753357776554320--26774310020231253100112--689998808520156267868898777379857999
Q gi|254780806|r 162 GLSQLLETVEEVRRTVN--SALDIQGIILTMFDSRNSLSQQV--VSDVRKNLGGKVYNTVIPRNVRISEAPSYGKPAIIY 237 (265)
Q Consensus 162 ~~~~~~~~i~~~~~~~~--~~~~~~~iv~N~~~~~~~~~~~~--~~~l~~~~~~~v~~~~Ip~~~~i~~a~~~g~pv~~~ 237 (265)
T Consensus 152 DADRvIGlLea~~~i~~~GEE~~-~~LivNR~rP~mV~~G~Mlsi~Dv~~~L~i~LiG-viPeD~~iI~stN~GEP~vl~ 229 (272)
T TIGR01968 152 DADRVIGLLEAKGNIEEKGEEVK-IKLIVNRLRPEMVKKGDMLSIDDVLEILSIPLIG-VIPEDEEIIVSTNKGEPVVLN 229 (272)
T ss_pred HHHHHHHHHCCCCCCCCCCCEEE-EEEEEECCCHHHHHCCCCCCHHHHHHHCCCCCEE-EECCCCCEEEEECCCEEEEEC
T ss_conf 25567524212455445776464-3477851564774168982789999860886168-632998657664561435446
Q ss_pred CCC-CHHHHHHHHHHHHHHHHHHH
Q ss_conf 799-98999999999999999986
Q gi|254780806|r 238 DLK-CAGSQAYLKLASELIQQERH 260 (265)
Q Consensus 238 ~p~-s~~a~~~~~la~el~~~~~~ 260 (265)
T Consensus 230 -~~L~~~g~Af~~~ArRi~G~~vp 252 (272)
T TIGR01968 230 -KKLSRAGKAFENIARRILGEEVP 252 (272)
T ss_pred -CCCCHHHHHHHHHHHHHCCCCCC
T ss_conf -00261678899998753488643