HHsearch alignment for GI: 254780806 and conserved domain: TIGR03371
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PMID:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=100.00 E-value=0 Score=353.74 Aligned_cols=243 Identities=24% Similarity=0.294 Sum_probs=202.1
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCE
Q ss_conf 49999808898888999999999999879959999878776801121246333454116763025771210244444420
Q gi|254780806|r 7 RIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELYDRKYSSYDLLIEEKNINQILIQTAIPNL 86 (265)
Q Consensus 7 kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~~~~l 86 (265)
T Consensus 2 kiIav~n~KGGVGKTT~avNLA~~La~~G~rVLlIDlDpQ~~l~~~~g~~~~-~~~~l~~~~~~~~~~~~~~~~-~~~~~ 79 (246)
T TIGR03371 2 KVIAIVGIKGGVGRTTLTAALASALKLLGEPVLAIDLDPQNLLRLHFGMDWS-VRDGWARALLAGEDWRAAAYR-SSDGV 79 (246)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCC-CCCCHHHHHHCCCCHHHHHEE-CCCCE
T ss_conf 3999975999854999999999999968997899975999850322488875-345699998279988895255-78982
Q ss_pred EECCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 0014887-457750001232222102333224765102782033101333222210112331001111123113788875
Q gi|254780806|r 87 SIIPSTM-DLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFNLLTMNAMAAADSILVPLQCEFFALEGLSQ 165 (265)
Q Consensus 87 ~iipa~~-~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~~~~~~al~aad~viip~~p~~~s~~~~~~ 165 (265)
T Consensus 80 ~~ip~~~~~~~~~~~~~~~---~~~~l~~~l~~l~~~~~D~viiD~pp~l~~~~~~al~aad~vlipv~~~~~s~~~~~~ 156 (246)
T TIGR03371 80 LFLPYGTLSADEREAYQAH---DAGWLARLLQQLDLAARDWVLIDLPRGPSPITDQALAAADLVLVVVNADAACYATLHQ 156 (246)
T ss_pred EEEECCCCCHHHHHHHCCC---CHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCHHHHHHHHH
T ss_conf 8970898477789876044---7899999998630367988999489987499999999889479981899899999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCHHHH
Q ss_conf 33577765543202677431002023125310011268999880852015626786889877737985799979998999
Q gi|254780806|r 166 LLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQVVSDVRKNLGGKVYNTVIPRNVRISEAPSYGKPAIIYDLKCAGSQ 245 (265)
Q Consensus 166 ~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~~l~~~~~~~v~~~~Ip~~~~i~~a~~~g~pv~~~~p~s~~a~ 245 (265)
T Consensus 157 ~~~~~~~~~~----~~~~~~iv~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~I~~~~~v~eA~~~g~pv~~~~p~S~aa~ 232 (246)
T TIGR03371 157 LALALLARSV----PPDGIHYLINQFQPARQLSRDVRAVLRATLGSRLLPMFVHRDEAVAEALARGTPVFNYAPHSQAAH 232 (246)
T ss_pred HHHHHHHHCC----CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEECCCCHHHH
T ss_conf 9999998427----767517886302640158999999999974988162268997799999976998266995898999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254780806|r 246 AYLKLASELIQQE 258 (265)
Q Consensus 246 ~~~~la~el~~~~ 258 (265)
T Consensus 233 ~y~~LA~~ll~~l 245 (246)
T TIGR03371 233 DIRTLAFWLLTKL 245 (246)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999963