HHsearch alignment for GI: 254780806 and conserved domain: TIGR03600
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=95.67 E-value=0.028 Score=32.84 Aligned_cols=40 Identities=33% Similarity=0.540 Sum_probs=32.4
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHH-HCCCCEEEEECCC
Q ss_conf 8749999808898888999999999999-8799599998787
Q gi|254780806|r 5 KSRIITIANQKGGVGKTTTAINLSTALA-AIGENVLLIDLDP 45 (265)
Q Consensus 5 ~~kvI~v~s~KGGvGKTT~a~nlA~~la-~~g~rVllID~D~ 45 (265)
T Consensus 193 ~g~Li-IiaARPsmGKTafalnia~n~A~~~g~~Vl~fSLEM 233 (421)
T TIGR03600 193 KGDLI-VIGARPSMGKTTLALNIAENVALREGKPVLFFSLEM 233 (421)
T ss_pred CCCEE-EEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 88689-998546787459999999999986698389992579