HHsearch alignment for GI: 254780806 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=92.72 E-value=0.2 Score=27.84 Aligned_cols=38 Identities=24% Similarity=0.325 Sum_probs=31.3
Q ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 749999808898888999999999999879959999878
Q gi|254780806|r 6 SRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLD 44 (265)
Q Consensus 6 ~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D 44 (265)
T Consensus 19 ~~~i-ll~GppGtGKT~la~~ia~~~~~~~~~~~~~~~~ 56 (151)
T cd00009 19 PKNL-LLYGPPGTGKTTLARAIANELFRPGAPFLYLNAS 56 (151)
T ss_pred CCEE-EEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHH
T ss_conf 9808-9989999886599999999712137982785477