HHsearch alignment for GI: 254780806 and conserved domain: cd01122

>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.

Probab=95.90  E-value=0.022  Score=33.46  Aligned_cols=39  Identities=36%  Similarity=0.399  Sum_probs=32.0

Q ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHHH-CCCCEEEEECC
Q ss_conf             87499998088988889999999999998-79959999878
Q gi|254780806|r    5 KSRIITIANQKGGVGKTTTAINLSTALAA-IGENVLLIDLD   44 (265)
Q Consensus         5 ~~kvI~v~s~KGGvGKTT~a~nlA~~la~-~g~rVllID~D   44 (265)
T Consensus        29 ~GeL~-viaarpg~GKT~f~~~~a~~~~~~~g~~vl~~SlE   68 (271)
T cd01122          29 KGELI-ILTAGTGVGKTTFLREYALDLITQHGVRVGTISLE   68 (271)
T ss_pred             CCCEE-EEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             98089-99968998699999999999999769908999704