HHsearch alignment for GI: 254780806 and conserved domain: cd01123

>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .

Probab=93.21  E-value=0.27  Score=27.07  Aligned_cols=39  Identities=23%  Similarity=0.226  Sum_probs=30.3

Q ss_pred             EEEEEECCCCCCCHHHHHHHHHHHHHH------CCCCEEEEECCC
Q ss_conf             499998088988889999999999998------799599998787
Q gi|254780806|r    7 RIITIANQKGGVGKTTTAINLSTALAA------IGENVLLIDLDP   45 (265)
Q Consensus         7 kvI~v~s~KGGvGKTT~a~nlA~~la~------~g~rVllID~D~   45 (265)
T Consensus        19 G~itEi~G~~GsGKTql~lqla~~~~~~~~~~g~~~~vvyIdtE~   63 (235)
T cd01123          19 GSITEIFGEFGSGKTQLCHQLAVTVQLPIELGGLEGKAVYIDTEG   63 (235)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             879999999998499999999999842475367896299995367