HHsearch alignment for GI: 254780806 and conserved domain: cd01124

>cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs. A related protein is found in archaea.

Probab=95.77  E-value=0.019  Score=33.75  Aligned_cols=35  Identities=37%  Similarity=0.392  Sum_probs=31.3

Q ss_pred             EEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             99808898888999999999999879959999878
Q gi|254780806|r   10 TIANQKGGVGKTTTAINLSTALAAIGENVLLIDLD   44 (265)
Q Consensus        10 ~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D   44 (265)
T Consensus         2 tLi~G~pGsGKT~~a~qfl~~~a~~ge~~lyis~e   36 (187)
T cd01124           2 TLLSGGPGTGKTTFALQFLYAGLARGEPGLYVTLE   36 (187)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             15876899999999999999998769978999950