HHsearch alignment for GI: 254780806 and conserved domain: cd01890
>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=96.14 E-value=0.0057 Score=36.81 Aligned_cols=84 Identities=17% Similarity=0.225 Sum_probs=51.8
Q ss_pred CCCCCEEEECCCCCC--CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHH
Q ss_conf 278203310133322--221011233100111112311378887533577765543202677431002023125310011
Q gi|254780806|r 123 DFSYIFLDCPPSFNL--LTMNAMAAADSILVPLQCEFFALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQ 200 (265)
Q Consensus 123 ~yD~IiiD~pp~~~~--~~~~al~aad~viip~~p~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~ 200 (265)
T Consensus 66 ~~~in~iDtPGh~dF~~~~~~al~~~D~allVVda~~G-v~--~qT~~~~~~a~~-~--~~p~i-vviNKiD~~~ad~~~ 138 (179)
T cd01890 66 EYLLNLIDTPGHVDFSYEVSRSLAACEGALLLVDATQG-VE--AQTLANFYLALE-N--NLEII-PVINKIDLPSADPER 138 (179)
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHCEEEEEEECCCC-CC--HHHHHHHHHHHH-C--CCCEE-EEEECCCCCCCCHHH
T ss_conf 14899998998645177898899754427899864778-73--748999999987-6--99889-998655567789999
Q ss_pred HHHHHHHHHCCCC
Q ss_conf 2689998808520
Q gi|254780806|r 201 VVSDVRKNLGGKV 213 (265)
Q Consensus 201 ~~~~l~~~~~~~v 213 (265)
T Consensus 139 v~~~i~~~~g~~~ 151 (179)
T cd01890 139 VKQQIEDVLGLDP 151 (179)
T ss_pred HHHHHHHHHCCCC
T ss_conf 9999999868897