HHsearch alignment for GI: 254780806 and conserved domain: cd03114
>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=98.14 E-value=1.4e-05 Score=52.06 Aligned_cols=123 Identities=23% Similarity=0.245 Sum_probs=72.3
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCEE
Q ss_conf 99998088988889999999999998799599998787768011212463334541167630257712102444444200
Q gi|254780806|r 8 IITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELYDRKYSSYDLLIEEKNINQILIQTAIPNLS 87 (265)
Q Consensus 8 vI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~~~~l~ 87 (265)
T Consensus 1 viGit-G~pGaGKStLi~~l~~~~~~~g~~VaVlavDPsS~~sgG----------al---LGDRiRm~~~---~~~~~vf 63 (148)
T cd03114 1 VIGIT-GVPGAGKSTLIDALITALRARGKRVAVLAIDPSSPFSGG----------AI---LGDRIRMERH---ASDPGVF 63 (148)
T ss_pred CEEEC-CCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC----------CC---HHHHHHHHHH---CCCCCEE
T ss_conf 97625-899787899999999999978983799996888786686----------20---3235453441---5799836
Q ss_pred EC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCH
Q ss_conf 01--488745775000123222210233322476510278203310133322221011233100111112311
Q gi|254780806|r 88 II--PSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFNLLTMNAMAAADSILVPLQCEFF 158 (265)
Q Consensus 88 ii--pa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~~~~~~al~aad~viip~~p~~~ 158 (265)
T Consensus 64 iRs~atrg~~ggla----------~~~~~~i~~l~~~g~D~IiIETvG-vGQse~~i~~~aD~~i~v~~p~~G 125 (148)
T cd03114 64 IRSLATRGFLGGLS----------RATPEVIRVLDAAGFDVIIVETVG-VGQSEVDIASMADTTVVVMAPGAG 125 (148)
T ss_pred EEECCCCCCCCCHH----------HHHHHHHHHHHHCCCCEEEEECCC-CCCCHHHHHHHCCEEEEEECCCCC
T ss_conf 86346666542046----------889999999997599989997487-775602655435669999636887