HHsearch alignment for GI: 254780806 and conserved domain: cd03116
>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.
Probab=97.14 E-value=0.00095 Score=41.38 Aligned_cols=41 Identities=34% Similarity=0.384 Sum_probs=36.0
Q ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 749999808898888999999999999879959999878776
Q gi|254780806|r 6 SRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQG 47 (265)
Q Consensus 6 ~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~ 47 (265)
T Consensus 1 mkii~iv-G~snSGKTTLi~kli~~l~~~G~~V~~iKH~~H~ 41 (159)
T cd03116 1 MKVIGFV-GYSGSGKTTLLEKLIPALSARGLRVAVIKHDHHD 41 (159)
T ss_pred CEEEEEE-ECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf 9299999-6799999999999999999779859899734767