HHsearch alignment for GI: 254780806 and conserved domain: pfam00009
>pfam00009 GTP_EFTU Elongation factor Tu GTP binding domain. This domain contains a P-loop motif, also found in several other families such as pfam00071, pfam00025 and pfam00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.
Probab=97.14 E-value=0.0012 Score=40.79 Aligned_cols=79 Identities=11% Similarity=0.193 Sum_probs=43.0
Q ss_pred CCCCCCEEEECCCCC--CCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHH-H
Q ss_conf 027820331013332--2221011233100111112311378887533577765543202677431002023125310-0
Q gi|254780806|r 122 SDFSYIFLDCPPSFN--LLTMNAMAAADSILVPLQCEFFALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSL-S 198 (265)
Q Consensus 122 ~~yD~IiiD~pp~~~--~~~~~al~aad~viip~~p~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~-~ 198 (265)
T Consensus 65 ~~~~i~~iDtPGh~~f~~~~~~~l~~aD~~vlVvda~~G~~~qt~~---~~~~~~~-~~--~p~i-v~vNKiD~v~~~~~ 137 (185)
T pfam00009 65 KKRHINIIDTPGHVDFTKEMIRGAAQADGAILVVDAVEGVMPQTRE---HLLLAKQ-LG--VPII-VFINKMDRVDDAEL 137 (185)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH---HHHHHHH-HC--CCEE-EEEECCCCCCHHHH
T ss_conf 8936899989987143999999986465642999867685323099---9999998-28--9879-99977327776769
Q ss_pred HHHHHHHHH
Q ss_conf 112689998
Q gi|254780806|r 199 QQVVSDVRK 207 (265)
Q Consensus 199 ~~~~~~l~~ 207 (265)
T Consensus 138 ~~~~~e~~~ 146 (185)
T pfam00009 138 DEVVEEISR 146 (185)
T ss_pred HHHHHHHHH
T ss_conf 999999999