HHsearch alignment for GI: 254780806 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=90.16 E-value=0.35 Score=26.41 Aligned_cols=43 Identities=16% Similarity=0.157 Sum_probs=20.3
Q ss_pred CCCCCCCCCCCCHH--HHHHHHCCCCEEEE-CCCCHHHHHHHHHHH
Q ss_conf 85201562678688--98777379857999-799989999999999
Q gi|254780806|r 210 GGKVYNTVIPRNVR--ISEAPSYGKPAIIY-DLKCAGSQAYLKLAS 252 (265)
Q Consensus 210 ~~~v~~~~Ip~~~~--i~~a~~~g~pv~~~-~p~s~~a~~~~~la~ 252 (265)
T Consensus 210 PD~IivGEiR~~Ea~~~l~a~~TGH~g~ltTiHA~sa~~ai~RL~~ 255 (283)
T pfam00437 210 PDRIMVGEIRDGETADILRAANTGHPGSLSTLHANSAAGALTRLEQ 255 (283)
T ss_pred CCEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
T ss_conf 9989757869989999999997599840785714998999999998