HHsearch alignment for GI: 254780806 and conserved domain: pfam04851

>pfam04851 ResIII Type III restriction enzyme, res subunit.

Probab=93.05  E-value=0.23  Score=27.43  Aligned_cols=34  Identities=32%  Similarity=0.372  Sum_probs=26.0

Q ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             749999808898888999999999999879959999
Q gi|254780806|r    6 SRIITIANQKGGVGKTTTAINLSTALAAIGENVLLI   41 (265)
Q Consensus         6 ~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllI   41 (265)
T Consensus        19 ~~~~i~--~pTGsGKT~~~~~~i~~~~~~~~~~lvl   52 (103)
T pfam04851        19 KRGLIV--MATGSGKTLTAAKLIARLLKGKKKVLFL   52 (103)
T ss_pred             CCEEEE--ECCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             986999--5899987999999999998469929999