HHsearch alignment for GI: 254780806 and conserved domain: pfam06564
>pfam06564 YhjQ YhjQ protein. This family consists of several bacterial YhjQ proteins. The function of this family is unknown. However, the family does contain a P-loop sequence motif suggesting a nucleotide binding function.
Probab=100.00 E-value=0 Score=329.75 Aligned_cols=238 Identities=19% Similarity=0.248 Sum_probs=189.4
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCE
Q ss_conf 49999808898888999999999999879959999878776801121246333454116763025771210244444420
Q gi|254780806|r 7 RIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELYDRKYSSYDLLIEEKNINQILIQTAIPNL 86 (265)
Q Consensus 7 kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~~~~l 86 (265)
T Consensus 2 kiIai~s~KGGVGKTT~t~nLa~aLa~~G~rVLlID~Dpq~~l~~~~g~~~~~~-~g~~~~~l~~~~~~~~~~~~-~~gl 79 (244)
T pfam06564 2 AVLALQGVRGGVGTTSLTAALGWALQQLGESVLVIDASPDNLLRLHFNVDFDHS-DGWARAELDGRPWRDAALRY-TPGL 79 (244)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC-CCHHHHHHCCCCHHHHHEEE-CCCE
T ss_conf 299996699986199999999999997799589996898742102358886434-41489987599777744452-6975
Q ss_pred EECCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHH-HHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 00148874577500012-3222210233322476-510278203310133322221011233100111112311378887
Q gi|254780806|r 87 SIIPSTMDLLGIEMILG-GEKDRLFRLDKALSVQ-LTSDFSYIFLDCPPSFNLLTMNAMAAADSILVPLQCEFFALEGLS 164 (265)
Q Consensus 87 ~iipa~~~~~~~~~~l~-~~~~~~~~l~~~l~~~-l~~~yD~IiiD~pp~~~~~~~~al~aad~viip~~p~~~s~~~~~ 164 (265)
T Consensus 80 ~llP~g-~l~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~yD~iliD~Pp~l~~l~~~al~aad~vLv~v~~d~~s~~~l~ 158 (244)
T pfam06564 80 DLLPFG-QLTGAERENLQQLQPDLGAWAQRLQLLKASGQYRWILLDLPQGFSPLTRQLLELADVTLAVVHADANCHIRLH 158 (244)
T ss_pred EEEECC-CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHH
T ss_conf 897289-9747899989865443799999876421357899999979999689999999976960899688858999973
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCHHH
Q ss_conf 53357776554320267743100202312531001126899988085201562678688987773798579997999899
Q gi|254780806|r 165 QLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQVVSDVRKNLGGKVYNTVIPRNVRISEAPSYGKPAIIYDLKCAGS 244 (265)
Q Consensus 165 ~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~~l~~~~~~~v~~~~Ip~~~~i~~a~~~g~pv~~~~p~s~~a 244 (265)
T Consensus 159 ----------~~~~~--~~~~ilvn~~d~~~~l~~d~~~~~~~~~~~-~l~~~I~rd~~l~EA~a~g~pv~~yaP~S~aA 225 (244)
T pfam06564 159 ----------QQALP--AGCHLLINDFRIGSQLQDDLYQLWLQSQRR-LLPIVVHRDEAMAEALAAKQPLGEYRPDSLAA 225 (244)
T ss_pred ----------HCCCC--CCCEEEEECCCHHHHHHHHHHHHHHHHHCC-CCCEEECCCCHHHHHHHCCCCHHHCCCCCHHH
T ss_conf ----------23344--677488642455768999999999986087-25755079882989986799554538699899
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999986
Q gi|254780806|r 245 QAYLKLASELIQQERH 260 (265)
Q Consensus 245 ~~~~~la~el~~~~~~ 260 (265)
T Consensus 226 ~dy~~LA~w~l~~~~~ 241 (244)
T pfam06564 226 EEVLTLANWCLLHYSR 241 (244)
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999986433