HHsearch alignment for GI: 254780806 and conserved domain: pfam07755
>pfam07755 DUF1611 Protein of unknown function (DUF1611). This region is found in a number of hypothetical bacterial and archaeal proteins. The region is approximately 350 residues long. A member of this family is thought to associate with another subunit to form an H+-transporting ATPase, but no evidence has been found to support this.
Probab=97.36 E-value=0.0019 Score=39.65 Aligned_cols=170 Identities=19% Similarity=0.285 Sum_probs=97.2
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCC
Q ss_conf 87499998088988889999999999998799599998787768011212463334541167630257712102444444
Q gi|254780806|r 5 KSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELYDRKYSSYDLLIEEKNINQILIQTAIP 84 (265)
Q Consensus 5 ~~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~~~ 84 (265)
T Consensus 112 ~~~rvl~vGTDcavGK~tTal~l~~~l~~~Gi~a~fiaTGQTGili~g---------~Gv--------~----------- 163 (302)
T pfam07755 112 KAKRVLTVGTDCAVGKMTTALELERALRERGLNAAFVATGQTGILIAG---------YGV--------P----------- 163 (302)
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEC---------CEE--------E-----------
T ss_conf 987899960573340789999999999977998479972761368815---------247--------8-----------
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC-----CCCCCCHHHHH--HHCCCCCCCCC
Q ss_conf 200014887457750001232222102333224765102782033101333-----22221011233--10011111231
Q gi|254780806|r 85 NLSIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSF-----NLLTMNAMAAA--DSILVPLQCEF 157 (265)
Q Consensus 85 ~l~iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~-----~~~~~~al~aa--d~viip~~p~~ 157 (265)
T Consensus 164 -iDav~~DFvaGavE--------------~~v-~~~~~~~d~iiIEGQgSL~hP~y~gvsl~lL~Gs~Pd~lIL~H~p~R 227 (302)
T pfam07755 164 -LDAVPADFVAGAVE--------------ALV-LDAAEEDDWIVIEGQGSLSHPAYSGVTLGLLHGSQPDALVLCHRPGR 227 (302)
T ss_pred -ECCCHHHHHHHHHH--------------HHH-HHHCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCC
T ss_conf -43224766767899--------------999-86454678799916543236656654598860789986999637898
Q ss_pred HH--------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 13--------7888753357776554320267743100202312531001126899988085201562678
Q gi|254780806|r 158 FA--------LEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQVVSDVRKNLGGKVYNTVIPR 220 (265)
Q Consensus 158 ~s--------~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~~l~~~~~~~v~~~~Ip~ 220 (265)
T Consensus 228 ~~~~~~~~~~iP~l~~~i~l~e~~a~~~-~~~kvvgIslNt~~l~~~ea~~~~~~~~~~~glPv~Dp-~r~ 296 (302)
T pfam07755 228 KHRRGFPHYPLPPLEEEIELIEALAGTT-PPAKVVGISLNTRGLSEAEAREAIERIEEELGLPVTDP-VRF 296 (302)
T ss_pred CEECCCCCCCCCCHHHHHHHHHHHHCCC-CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEC-CCC
T ss_conf 6227876688999899999999973647-99739999955787999999999999999989974712-123